CsaV3_1G036480 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCATATAATCTCTTCTCATCATCAGTTCTTCAAATTCGGTGTCGTCCTGGTGAAATGGGTAATAGTTTAAAGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGATTTAATCAGAGTCGTTCATCTCAACGGCCTCGTCCAAGAGTTCTCTCCCCCCCTCACCGCCGCTCAGATTCTCCAAGCCAATCCCGGCCACCTCCTCACCACTCCCTCCTCCCACGACCACCGTCTCGTCCGCCGTGTCAACATTCTCTCACCCCAATCTCACCTCCGACGAGGCGGCATTTATTTCTTGATCCCCGCTGATCATTCCGACCACGGCCACCGCAAGCCACCTGCTAAAAAACAATCCTCCGCCGTCTCCGGTGCCGGCGTTTTCCCTGAATCTGAGGATGTGATTGTGTTGAAGAAGGATAAACCCAGGCGCCGAGATCGCCGGAGGAGTCGTAGCTACGGCGGGGCGTGGCAGCCTCATTTACACAGCATTAGTGAAGATTAGTTAATTAACTAATACCGAGAAAACACCCTCCTATACACACACACATATGGTTGTTTTTTTAACCATATGGACTTTGACGGCGGCGGCCGATGAAGAGAGATGGGAATTGTGATGATCATGTACATGAATTAATGGTTGGTGTTTGTGGATAAAGAATATATTATTGATTTCAATCATATTCATTTATTTGTAATTCTGTACCTTAATTATTATCATTAATAATAATACAGCTCCTTAATTCTAATTTTCATATTTTGAGTGTAAGATATAAATTATTAAAAGATAAATATATAGTGTAAGATAGTATTCATATTTTGAGTAGAAAGAAAGTATATGTAACACCAAAAATGCATATAAGTTAAAAAAGTGCATGGGAG ATGGGTAATAGTTTAAAGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGATTTAATCAGAGTCGTTCATCTCAACGGCCTCGTCCAAGAGTTCTCTCCCCCCCTCACCGCCGCTCAGATTCTCCAAGCCAATCCCGGCCACCTCCTCACCACTCCCTCCTCCCACGACCACCGTCTCGTCCGCCGTGTCAACATTCTCTCACCCCAATCTCACCTCCGACGAGGCGGCATTTATTTCTTGATCCCCGCTGATCATTCCGACCACGGCCACCGCAAGCCACCTGCTAAAAAACAATCCTCCGCCGTCTCCGGTGCCGGCGTTTTCCCTGAATCTGAGGATGTGATTGTGTTGAAGAAGGATAAACCCAGGCGCCGAGATCGCCGGAGGAGTCGTAGCTACGGCGGGGCGTGGCAGCCTCATTTACACAGCATTAGTGAAGATTAG ATGGGTAATAGTTTAAAGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGATTTAATCAGAGTCGTTCATCTCAACGGCCTCGTCCAAGAGTTCTCTCCCCCCCTCACCGCCGCTCAGATTCTCCAAGCCAATCCCGGCCACCTCCTCACCACTCCCTCCTCCCACGACCACCGTCTCGTCCGCCGTGTCAACATTCTCTCACCCCAATCTCACCTCCGACGAGGCGGCATTTATTTCTTGATCCCCGCTGATCATTCCGACCACGGCCACCGCAAGCCACCTGCTAAAAAACAATCCTCCGCCGTCTCCGGTGCCGGCGTTTTCCCTGAATCTGAGGATGTGATTGTGTTGAAGAAGGATAAACCCAGGCGCCGAGATCGCCGGAGGAGTCGTAGCTACGGCGGGGCGTGGCAGCCTCATTTACACAGCATTAGTGAAGATTAG MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED
BLAST of CsaV3_1G036480 vs. NCBI nr
Match: XP_011658739.1 (PREDICTED: uncharacterized protein LOC105436080 [Cucumis sativus] >KGN65837.1 hypothetical protein Csa_1G533440 [Cucumis sativus]) HSP 1 Score: 311.2 bits (796), Expect = 1.9e-81 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. NCBI nr
Match: XP_022964962.1 (uncharacterized protein LOC111464913 [Cucurbita moschata]) HSP 1 Score: 209.9 bits (533), Expect = 5.9e-51 Identity = 109/156 (69.87%), Postives = 119/156 (76.28%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. NCBI nr
Match: XP_022949253.1 (uncharacterized protein LOC111452664 [Cucurbita moschata]) HSP 1 Score: 209.1 bits (531), Expect = 1.0e-50 Identity = 112/150 (74.67%), Postives = 120/150 (80.00%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. NCBI nr
Match: XP_022970467.1 (uncharacterized protein LOC111469438 [Cucurbita maxima]) HSP 1 Score: 209.1 bits (531), Expect = 1.0e-50 Identity = 109/156 (69.87%), Postives = 120/156 (76.92%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. NCBI nr
Match: XP_023522760.1 (uncharacterized protein LOC111786763 [Cucurbita pepo subsp. pepo] >XP_023519366.1 uncharacterized protein LOC111782801 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203.4 bits (516), Expect = 5.5e-49 Identity = 106/153 (69.28%), Postives = 117/153 (76.47%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. TAIR10
Match: AT1G06980.1 (unknown protein) HSP 1 Score: 127.9 bits (320), Expect = 5.3e-30 Identity = 76/169 (44.97%), Postives = 98/169 (57.99%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. TAIR10
Match: AT2G30230.1 (unknown protein) HSP 1 Score: 125.2 bits (313), Expect = 3.5e-29 Identity = 78/178 (43.82%), Postives = 102/178 (57.30%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. TAIR10
Match: AT1G29195.1 (unknown protein) HSP 1 Score: 100.1 bits (248), Expect = 1.2e-21 Identity = 67/190 (35.26%), Postives = 98/190 (51.58%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. TAIR10
Match: AT5G50090.1 (unknown protein) HSP 1 Score: 51.6 bits (122), Expect = 4.9e-07 Identity = 48/158 (30.38%), Postives = 68/158 (43.04%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. TAIR10
Match: AT5G66580.1 (unknown protein) HSP 1 Score: 45.4 bits (106), Expect = 3.5e-05 Identity = 34/110 (30.91%), Postives = 52/110 (47.27%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. TrEMBL
Match: tr|A0A0A0LYB2|A0A0A0LYB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533440 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 1.2e-81 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. TrEMBL
Match: tr|A0A0D2TNE3|A0A0D2TNE3_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G113600 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 6.9e-32 Identity = 76/150 (50.67%), Postives = 97/150 (64.67%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. TrEMBL
Match: tr|A0A1U8PMW5|A0A1U8PMW5_GOSHI (uncharacterized protein LOC107903226 OS=Gossypium hirsutum OX=3635 GN=LOC107960762 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31 Identity = 76/150 (50.67%), Postives = 96/150 (64.00%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. TrEMBL
Match: tr|A0A2P5QYP8|A0A2P5QYP8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD23412 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31 Identity = 76/150 (50.67%), Postives = 96/150 (64.00%), Query Frame = 0
BLAST of CsaV3_1G036480 vs. TrEMBL
Match: tr|W9RA40|W9RA40_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011140 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.9e-30 Identity = 79/158 (50.00%), Postives = 98/158 (62.03%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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