Csa1G533440 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G533440
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	At1g29190/F28N24_12; contains IPR025322 (Protein of unknown function DUF4228)
Location	Chr1 : 18924747 .. 18925226 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCTTCAAATTCGGTGTCGTCCTGGTGAAATGGGTAATAGTTTAAAGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGATTTAATCAGAGTCGTTCATCTCAACGGCCTCGTCCAAGAGTTCTCTCCCCCCCTCACCGCCGCTCAGATTCTCCAAGCCAATCCCGGCCACCTCCTCACCACTCCCTCCTCCCACGACCACCGTCTCGTCCGCCGTGTCAACATTCTCTCACCCCAATCTCACCTCCGACGAGGCGGCATTTATTTCTTGATCCCCGCTGATCATTCCGACCACGGCCACCGCAAGCCACCTGCTAAAAAACAATCCTCCGCCGTCTCCGGTGCCGGCGTTTTCCCTGAATCTGAGGATGTGATTGTGTTGAAGAAGGATAAACCCAGGCGCCGAGATCGCCGGAGGAGTCGTAGCTACGGCGGGGCGTGGCAGCCTCATTTACACAGCATTAGTGAAGATTAG

mRNA sequence

ATGGGTAATAGTTTAAAGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGATTTAATCAGAGTCGTTCATCTCAACGGCCTCGTCCAAGAGTTCTCTCCCCCCCTCACCGCCGCTCAGATTCTCCAAGCCAATCCCGGCCACCTCCTCACCACTCCCTCCTCCCACGACCACCGTCTCGTCCGCCGTGTCAACATTCTCTCACCCCAATCTCACCTCCGACGAGGCGGCATTTATTTCTTGATCCCCGCTGATCATTCCGACCACGGCCACCGCAAGCCACCTGCTAAAAAACAATCCTCCGCCGTCTCCGGTGCCGGCGTTTTCCCTGAATCTGAGGATGTGATTGTGTTGAAGAAGGATAAACCCAGGCGCCGAGATCGCCGGAGGAGTCGTAGCTACGGCGGGGCGTGGCAGCCTCATTTACACAGCATTAGTGAAGATTAG

Coding sequence (CDS)

ATGGGTAATAGTTTAAAGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGATTTAATCAGAGTCGTTCATCTCAACGGCCTCGTCCAAGAGTTCTCTCCCCCCCTCACCGCCGCTCAGATTCTCCAAGCCAATCCCGGCCACCTCCTCACCACTCCCTCCTCCCACGACCACCGTCTCGTCCGCCGTGTCAACATTCTCTCACCCCAATCTCACCTCCGACGAGGCGGCATTTATTTCTTGATCCCCGCTGATCATTCCGACCACGGCCACCGCAAGCCACCTGCTAAAAAACAATCCTCCGCCGTCTCCGGTGCCGGCGTTTTCCCTGAATCTGAGGATGTGATTGTGTTGAAGAAGGATAAACCCAGGCGCCGAGATCGCCGGAGGAGTCGTAGCTACGGCGGGGCGTGGCAGCCTCATTTACACAGCATTAGTGAAGATTAG

Protein sequence

MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED*

Homology

[Close]

BLAST of Csa1G533440 vs. TrEMBL
Match: A0A0A0LYB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533440 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 1.5e-81
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR
Sbjct: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60

Query: 61  LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLK 120
           LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLK
Sbjct: 61  LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLK 120

Query: 121 KDKPRRRDRRRSRSYGGAWQPHLHSISED 150
           KDKPRRRDRRRSRSYGGAWQPHLHSISED
Sbjct: 121 KDKPRRRDRRRSRSYGGAWQPHLHSISED 149

[Close]

BLAST of Csa1G533440 vs. TrEMBL
Match: A0A0D2TNE3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G113600 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.4e-32
Identity = 76/150 (50.67%), Postives = 97/150 (64.67%), Query Frame = 1


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNS++ CLGC+LPCGALDLIR+VHLNG V+E + P+TA  IL+ANP H+L+ P SH   
Sbjct: 1   MGNSIRCCLGCVLPCGALDLIRIVHLNGYVEEITHPVTAGDILKANPNHVLSKPCSHGQA 60

Query: 61  LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPES-EDVIVL 120
           +VR + ILSP+S LRRG IYFLIP       H        ++ VS     P +  +V + 
Sbjct: 61  VVREIVILSPESKLRRGCIYFLIPQKKKSAIHHNNVGNCNNNDVSDC--HPSNLPNVDIS 120

Query: 121 KKDKPRRRDRRRSRSYGGAWQPHLHSISED 150
           KK    R+DRR   S+ G W+PHL  ISED
Sbjct: 121 KKKHSSRKDRRHLHSHIGVWRPHLAIISED 148

[Close]

BLAST of Csa1G533440 vs. TrEMBL
Match: A0A0D2PH45_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G234400 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 9.2e-31
Identity = 79/156 (50.64%), Postives = 101/156 (64.74%), Query Frame = 1


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL+ CL C+LPCGALDLIR+VHLNG V+E + P+TAA+IL+ANP H+L+ P+S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEELTGPITAAEILKANPNHVLSKPTSQG-- 60

Query: 61  LVRRVNILSPQSHLRRGGIYFLIPADHS-------DHGHRKPPAKKQSSAVSGAGVFPES 120
           ++R++ ILSP S L+RG IYFLIP+  S          H+K   KKQS++   A      
Sbjct: 61  VLRKILILSPDSELKRGNIYFLIPSPPSLPQKKKTGVHHKKSSTKKQSNSSDVASDCDRP 120

Query: 121 EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED 150
           E      K    R+DRRR  S  G WQPHL +ISED
Sbjct: 121 E------KKHCSRKDRRRGHS--GVWQPHLETISED 146

[Close]

BLAST of Csa1G533440 vs. TrEMBL
Match: B9INS0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14490g PE=4 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 2.7e-30
Identity = 79/161 (49.07%), Postives = 103/161 (63.98%), Query Frame = 1


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL+ CL C+LPCGALDLIRVVHLNG V+E + P+TAA++L+ANP H+L+ PSS    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRVVHLNGHVEEITGPITAAEVLKANPNHVLSKPSSQS-- 60

Query: 61  LVRRVNILSPQSHLRRGGIYFLIPAD----HSDHGHRKPPAKKQSSAVSGAGVFPESEDV 120
           +VR++ ILSP+S L+RG IYFLIP+         G      K +SS+         ++DV
Sbjct: 61  VVRKILILSPESELKRGSIYFLIPSSSLPGEKKKGGNNCSHKSKSSSKKSKKYCNINKDV 120

Query: 121 --------IVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED 150
                    ++ + KP RRDRR SR     W+PHL SISED
Sbjct: 121 QDCDRHLNALVSEKKPSRRDRRTSRV--RVWRPHLQSISED 157

[Close]

BLAST of Csa1G533440 vs. TrEMBL
Match: B9I6L4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s14930g PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-30
Identity = 75/160 (46.88%), Postives = 104/160 (65.00%), Query Frame = 1


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL+ CL C+LPCGALDLIR+VHLNG V+E + P+TAA++L+ANP H+L+ PSS    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITGPITAAEVLKANPNHVLSKPSSQG-- 60

Query: 61  LVRRVNILSPQSHLRRGGIYFLIPADH---------SDHGHRKPPAKKQSSAVSGAGVFP 120
           +VR++ ILSP+S L+RG IYFLIP+           ++ GH+   + K+S          
Sbjct: 61  VVRKILILSPESELKRGSIYFLIPSSSLPGDKKKSGNNCGHQMKSSSKKSKRYCNNKDAR 120

Query: 121 ESEDVI--VLKKDKPRRRDRRRSRSYGGAWQPHLHSISED 150
           + +  +  ++ + K  RRDRR  R   G W+PHL SISED
Sbjct: 121 DCDRYLTDIVSEKKSSRRDRRTGRV--GVWRPHLQSISED 156

[Close]

BLAST of Csa1G533440 vs. TAIR10
Match: AT2G30230.1 (AT2G30230.1 unknown protein)

HSP 1 Score: 124.0 bits (310), Expect = 7.7e-29
Identity = 78/178 (43.82%), Postives = 100/178 (56.18%), Query Frame = 1


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL+ CL C+LPCGALDLIR+VHLNG V E + P+TA +ILQANP H+L+ P S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCSQG-- 60

Query: 61  LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ-----SSAVSGAGVFPES-- 120
           +VR++ ILSP+S L+RG IYFLIP D S    +K   +K+         SG  +  +   
Sbjct: 61  VVRKILILSPESELKRGSIYFLIP-DTSMPEKKKTKKRKELRCRKKPLESGNDINSDHVS 120

Query: 121 -----------------EDVIVLKK----DKPRRRDRRRSRSYG-GAWQPHLHSISED 150
                            EDV++ +K     K  R  R+ SRS     W+PHL SI+ED
Sbjct: 121 TNKDLDGHCLTLCEKYLEDVMLSEKMSSAGKENRHRRKHSRSASVSTWRPHLDSITED 175

[Close]

BLAST of Csa1G533440 vs. TAIR10
Match: AT1G06980.1 (AT1G06980.1 unknown protein)

HSP 1 Score: 122.9 bits (307), Expect = 1.7e-28
Identity = 76/169 (44.97%), Postives = 95/169 (56.21%), Query Frame = 1


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL+ CL C+LPCGALDLIR+VHLNG V+E +  +TA +ILQANP H+L+ P S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITRSITAGEILQANPNHVLSKPCSQG-- 60

Query: 61  LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRK----PPAKK--QSSAVSGAGVFPESE 120
           +VR++ ILSP+S L+RG IYFLIP        R+    P  KK  Q+ +   AG   + +
Sbjct: 61  VVRKILILSPESELKRGSIYFLIPDSSLPEKKRRRKDTPRRKKNLQNPSADAAGREIKGD 120

Query: 121 DVIV-------------LKKDKPRRRDRRRSRSYG-GAWQPHLHSISED 150
           +  V                 K  R  RR SRS     W+P L SISED
Sbjct: 121 EECVKLCEKYLEEVVSSASTGKEHRHRRRHSRSASVSTWRPLLDSISED 167

[Close]

BLAST of Csa1G533440 vs. TAIR10
Match: AT1G29195.1 (AT1G29195.1 unknown protein)

HSP 1 Score: 97.4 bits (241), Expect = 7.7e-21
Identity = 67/190 (35.26%), Postives = 95/190 (50.00%), Query Frame = 1


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSS---- 60
           M  +++ C+ CILPCGALD+IR+VH NG V+E S  +TA++I++A+P H+L  PSS    
Sbjct: 1   MKETIRCCIACILPCGALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSD 60

Query: 61  HDHRLV---RRVNILSPQSHLRRGGIYFLIPADHSDH----GHRKPPAKKQSSAVSGAGV 120
           HD R V    ++ I+ P++ L+RG IYFL+PA  SD     G  +      ++ V     
Sbjct: 61  HDERDVISATKIVIVPPEAELQRGKIYFLMPATKSDKCAGGGKIRREKSNANAVVKKRSQ 120

Query: 121 F-------------PESEDVIVLKKDK------------------PRRRDRRRSRSYGGA 149
           +              ES DV     +K                    ++DRR+ R   G 
Sbjct: 121 YRRQHRDGDEKCNGGESNDVKDKNYEKDLLISSDRYLTEILSEKVATQKDRRKGRV--GV 180

[Close]

BLAST of Csa1G533440 vs. TAIR10
Match: AT5G50090.1 (AT5G50090.1 unknown protein)

HSP 1 Score: 51.2 bits (121), Expect = 6.4e-07
Identity = 48/158 (30.38%), Postives = 66/158 (41.77%), Query Frame = 1


Query: 15  CGALDLIRVV--HLNGLVQEFSPPLTAAQILQANPGH----------LLTTPSSHDHRL- 74
           C A+D  RVV  H NG  ++ S P++A+ +++ NPGH          L +  S H   L 
Sbjct: 4   CQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHGGPLR 63

Query: 75  VRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGA-----------GVF 134
           + R+ +L P   L  G +Y LI       G       K      G+              
Sbjct: 64  LTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESKGSDDKLEMVKAINSTK 123

Query: 135 PESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISE 149
            ++ED + +KK +  R   R SRS    WQP L SISE
Sbjct: 124 LDNEDQLQMKKQEKER--SRISRS----WQPSLQSISE 155

[Close]

BLAST of Csa1G533440 vs. NCBI nr
Match: gi|778661798|ref|XP_011658739.1| (PREDICTED: uncharacterized protein LOC105436080 [Cucumis sativus])

HSP 1 Score: 310.1 bits (793), Expect = 2.2e-81
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR
Sbjct: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60

Query: 61  LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLK 120
           LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLK
Sbjct: 61  LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLK 120

Query: 121 KDKPRRRDRRRSRSYGGAWQPHLHSISED 150
           KDKPRRRDRRRSRSYGGAWQPHLHSISED
Sbjct: 121 KDKPRRRDRRRSRSYGGAWQPHLHSISED 149

[Close]

BLAST of Csa1G533440 vs. NCBI nr
Match: gi|1012206247|ref|XP_015931963.1| (PREDICTED: uncharacterized protein LOC107458270 [Arachis duranensis])

HSP 1 Score: 145.6 bits (366), Expect = 7.0e-32
Identity = 80/165 (48.48%), Postives = 106/165 (64.24%), Query Frame = 1


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL+ CL C+LPCGALDLIR+VHLNG V+E + P+TA ++L+ANP H+L+ PSS    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITRPITAGEVLKANPNHVLSKPSSQG-- 60

Query: 61  LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRK----PPAKKQSSAVSGAGVFPESEDV 120
           +VRR+ ILSP++ L+RG IYFLIPA       R+       KK SS+++ +    E+ D 
Sbjct: 61  VVRRILILSPETELKRGSIYFLIPASSLPADKRRHMNGSSCKKGSSSITKSNHHKETSDH 120

Query: 121 I----------VLKKDK--PRRRDRRRSRSYGGAWQPHLHSISED 150
                      ++ KDK   RRRDRR +    G+WQPHL SI ED
Sbjct: 121 SRRQNVPIQNEIVSKDKRCSRRRDRRSNGGRSGSWQPHLESILED 163

[Close]

BLAST of Csa1G533440 vs. NCBI nr
Match: gi|823219807|ref|XP_012442623.1| (PREDICTED: uncharacterized protein LOC105767596 [Gossypium raimondii])

HSP 1 Score: 145.2 bits (365), Expect = 9.2e-32
Identity = 76/150 (50.67%), Postives = 97/150 (64.67%), Query Frame = 1


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNS++ CLGC+LPCGALDLIR+VHLNG V+E + P+TA  IL+ANP H+L+ P SH   
Sbjct: 1   MGNSIRCCLGCVLPCGALDLIRIVHLNGYVEEITHPVTAGDILKANPNHVLSKPCSHGQA 60

Query: 61  LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPES-EDVIVL 120
           +VR + ILSP+S LRRG IYFLIP       H        ++ VS     P +  +V + 
Sbjct: 61  VVREIVILSPESKLRRGCIYFLIPQKKKSAIHHNNVGNCNNNDVSDC--HPSNLPNVDIS 120

Query: 121 KKDKPRRRDRRRSRSYGGAWQPHLHSISED 150
           KK    R+DRR   S+ G W+PHL  ISED
Sbjct: 121 KKKHSSRKDRRHLHSHIGVWRPHLAIISED 148

[Close]

BLAST of Csa1G533440 vs. NCBI nr
Match: gi|1021547778|ref|XP_016165388.1| (PREDICTED: uncharacterized protein LOC107608009 [Arachis ipaensis])

HSP 1 Score: 144.1 bits (362), Expect = 2.0e-31
Identity = 78/164 (47.56%), Postives = 105/164 (64.02%), Query Frame = 1


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL+ CL C+LPCGALDLIR+VHLNG V+E + P+TA ++L+ANP H+L+ PSS    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITGPITAGEVLKANPNHVLSKPSSEG-- 60

Query: 61  LVRRVNILSPQSHLRRGGIYFLIPADH---SDHGHRKPPAKKQSSAVSGAGVFPESEDVI 120
           +VRR+ ILSP++ L+RG IYFLIPA         H    + K+ S+++ +    E+ D  
Sbjct: 61  VVRRILILSPETELKRGSIYFLIPASSLPADKRRHMNGSSCKKGSSITKSNHHKETSDHS 120

Query: 121 ----------VLKKDK--PRRRDRRRSRSYGGAWQPHLHSISED 150
                     ++ KDK   RRRDRR +    G+WQPHL SI ED
Sbjct: 121 RRQNVPIQNEIVSKDKRCSRRRDRRSNGGRSGSWQPHLESILED 162

[Close]

BLAST of Csa1G533440 vs. NCBI nr
Match: gi|823153275|ref|XP_012476477.1| (PREDICTED: uncharacterized protein LOC105792443 [Gossypium raimondii])

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-30
Identity = 79/156 (50.64%), Postives = 101/156 (64.74%), Query Frame = 1


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL+ CL C+LPCGALDLIR+VHLNG V+E + P+TAA+IL+ANP H+L+ P+S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEELTGPITAAEILKANPNHVLSKPTSQG-- 60

Query: 61  LVRRVNILSPQSHLRRGGIYFLIPADHS-------DHGHRKPPAKKQSSAVSGAGVFPES 120
           ++R++ ILSP S L+RG IYFLIP+  S          H+K   KKQS++   A      
Sbjct: 61  VLRKILILSPDSELKRGNIYFLIPSPPSLPQKKKTGVHHKKSSTKKQSNSSDVASDCDRP 120

Query: 121 EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED 150
           E      K    R+DRRR  S  G WQPHL +ISED
Sbjct: 121 E------KKHCSRKDRRRGHS--GVWQPHLETISED 146

The following BLAST results are available for this feature:

BLAST of Csa1G533440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYB2_CUCSA	1.5e-81	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533440 PE=4 SV=1	[more]
A0A0D2TNE3_GOSRA	6.4e-32	50.67	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G113600 PE=4 SV=1	[more]
A0A0D2PH45_GOSRA	9.2e-31	50.64	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G234400 PE=4 SV=1	[more]
B9INS0_POPTR	2.7e-30	49.07	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14490g PE=4 SV=2	[more]
B9I6L4_POPTR	3.5e-30	46.88	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s14930g PE=4 SV=1	[more]

BLAST of Csa1G533440 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30230.1	7.7e-29	43.82	unknown protein	[more]
AT1G06980.1	1.7e-28	44.97	unknown protein	[more]
AT1G29195.1	7.7e-21	35.26	unknown protein	[more]
AT5G50090.1	6.4e-07	30.38	unknown protein	[more]

BLAST of Csa1G533440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778661798\|ref\|XP_011658739.1\|	2.2e-81	100.00	PREDICTED: uncharacterized protein LOC105436080 [Cucumis sativus]	[more]
gi\|1012206247\|ref\|XP_015931963.1\|	7.0e-32	48.48	PREDICTED: uncharacterized protein LOC107458270 [Arachis duranensis]	[more]
gi\|823219807\|ref\|XP_012442623.1\|	9.2e-32	50.67	PREDICTED: uncharacterized protein LOC105767596 [Gossypium raimondii]	[more]
gi\|1021547778\|ref\|XP_016165388.1\|	2.0e-31	47.56	PREDICTED: uncharacterized protein LOC107608009 [Arachis ipaensis]	[more]
gi\|823153275\|ref\|XP_012476477.1\|	1.3e-30	50.64	PREDICTED: uncharacterized protein LOC105792443 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G533440.1	Csa1G533440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..148 score: 1.1
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 2..149 score: 4.4
None	No IPR available	PANTHER	PTHR33052:SF26	SUBFAMILY NOT NAMED	coord: 2..149 score: 4.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G533440	Cla008137	Watermelon (97103) v1	cuwmB021
Csa1G533440	MELO3C020520	Melon (DHL92) v3.5.1	cumeB028
Csa1G533440	ClCG03G000440	Watermelon (Charleston Gray)	cuwcgB047
Csa1G533440	MELO3C020520.2	Melon (DHL92) v3.6.1	cumedB023
Csa1G533440	Bhi08G000392	Wax gourd	cuwgoB048
Csa1G533440	CSPI01G24180	Wild cucumber (PI 183967)	cpicuB001
Csa1G533440	Cucsa.151780	Cucumber (Gy14) v1	cgycuB219
Csa1G533440	CmaCh13G000310	Cucurbita maxima (Rimu)	cmacuB211
Csa1G533440	Cp4.1LG20g07720	Cucurbita pepo (Zucchini)	cpecuB522
Csa1G533440	CsGy1G023660	Cucumber (Gy14) v2	cgybcuB002

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G533440	Cucurbita maxima (Rimu)	cmacuB219
Csa1G533440	Cucurbita maxima (Rimu)	cmacuB427
Csa1G533440	Cucurbita maxima (Rimu)	cmacuB688
Csa1G533440	Cucurbita maxima (Rimu)	cmacuB689
Csa1G533440	Cucurbita moschata (Rifu)	cmocuB204
Csa1G533440	Cucurbita moschata (Rifu)	cmocuB416
Csa1G533440	Cucurbita moschata (Rifu)	cmocuB677
Csa1G533440	Cucurbita moschata (Rifu)	cmocuB678
Csa1G533440	Cucurbita pepo (Zucchini)	cpecuB382
Csa1G533440	Cucurbita pepo (Zucchini)	cpecuB507
Csa1G533440	Cucurbita pepo (Zucchini)	cpecuB529
Csa1G533440	Bottle gourd (USVL1VR-Ls)	culsiB030
Csa1G533440	Silver-seed gourd	carcuB0550
Csa1G533440	Silver-seed gourd	carcuB0641
Csa1G533440	Silver-seed gourd	carcuB0680
Csa1G533440	Watermelon (97103) v2	cuwmbB043