CmaCh12G006200 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G006200
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMyb-like DNA-binding domain containing protein, expressed
LocationCma_Chr12 : 3265537 .. 3266716 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGAGCTCCTTGCTGTGACAAAGCCAGTGTCAAGAAAGGCCCATGGTCGACTGAAGAAGACACCAAGCTCAAGTCTTACATTGAGCAACATGGAACTGGTGGGAACTGGATTGCTTTGCCTCAAAAAATTGGTAAAAATTCAATCTTTTTCATCTTGTTCTTCTTGATTTGATTCAATTTCTTCTGGGGTATCTGTTTTTTGGAGTTAAAATTTAGCCCTTTAAACGAAATTAGGCCTAAAGAGATGTGGAAAAAGTTGTCGATTGAGATGGCTAAATTATCTCCGTCCGAACATCAAGCATGGAGGTTTCTCCGAAGAAGAAGATAGAATCATTTGTAGTCTCTATCTTAGCATTGGAAGCAGGTAATTTTGTTTTCTGCAATCAAATCCCAAATCCTTCATTTTAATTAGGGTTTGAGTTTCGAGAAAAAAAAATCAATTCTAAGGGTTTGGTATGGAATAGGTGGTCTATAATTGCAGCACAGTTACCAGGAAGAACGGATAACGACATAAAGAACTACTGGAACACGAGGTTGAAGAAGAAGCTATTTGGGAAGCAAAGGAAAGAGCAGCAACAACAACAACAGGCATCTCGTCGAGGAAACGCCCTAAGGCATCACGGGACGGTGAATAAAAGCAATAGCACCATTCCTTATTGGCCTCAGCAGCAGCAGCAGCTCCCAGTGGCACCAAGCTACTATAACAACAACAACAACATGGCATCATCTGACCATATCAACCCAATTGAGAAATTGAGCAAATTTGGAGCTCAATTTATGGACGAAAGTGTGTACAACAACAATGCAAATGGGTATGGAAATGCGTATTATTTTCCATTGCTTCAAGGGCAAAGCAGCACCCAAATGGTGGATCTTGAGAATTATGACATGGGGTTTGATGATCCAAGAAGGGTTTTGTGTGGATTTGAGTTTGTGTATGGAGATCATCATAATCAGATAATGGGTACTAGTAATAGCCATGGCTATGAAATGGGGCCTCTTATTTCTTCTTGCCCTTCAAATTACGAAGCAATGCTGCAAGATTTGTCAACCACGACTCAAGAATATGATACTCACTTGAAGATATTGGATAGCAATGCAGTATGATCCATGGTGGGCGTAATGTAAAGTAATAAAAATGGACTCTTTTTGGCCGTAGTGATTTGGAGGGTGAC

mRNA sequence

ATGGGGAGAGCTCCTTGCTGTGACAAAGCCAGTGTCAAGAAAGGCCCATGGTCGACTGAAGAAGACACCAAGCTCAAGTCTTACATTGAGCAACATGGAACTGGTGGGAACTGGATTGCTTTGCCTCAAAAAATTGGCCTAAAGAGATGTGGAAAAAGTTGTCGATTGAGATGGCTAAATTATCTCCGTCCGAACATCAAGCATGGAGGTTTCTCCGAAGAAGAAGATAGAATCATTTGTAGTCTCTATCTTAGCATTGGAAGCAGGTGGTCTATAATTGCAGCACAGTTACCAGGAAGAACGGATAACGACATAAAGAACTACTGGAACACGAGGTTGAAGAAGAAGCTATTTGGGAAGCAAAGGAAAGAGCAGCAACAACAACAACAGGCATCTCGTCGAGGAAACGCCCTAAGGCATCACGGGACGGTGAATAAAAGCAATAGCACCATTCCTTATTGGCCTCAGCAGCAGCAGCAGCTCCCAGTGGCACCAAGCTACTATAACAACAACAACAACATGGCATCATCTGACCATATCAACCCAATTGAGAAATTGAGCAAATTTGGAGCTCAATTTATGGACGAAAGTGTGTACAACAACAATGCAAATGGGTATGGAAATGCGTATTATTTTCCATTGCTTCAAGGGCAAAGCAGCACCCAAATGGTGGATCTTGAGAATTATGACATGGGGTTTGATGATCCAAGAAGGGTTTTGTGTGGATTTGAGTTTGTGTATGGAGATCATCATAATCAGATAATGGGTACTAGTAATAGCCATGGCTATGAAATGGGGCCTCTTATTTCTTCTTGCCCTTCAAATTACGAAGCAATGCTGCAAGATTTGTCAACCACGACTCAAGAATATGATACTCACTTGAAGATATTGGATAGCAATGCAGTATGATCCATGGTGGGCGTAATGTAAAGTAATAAAAATGGACTCTTTTTGGCCGTAGTGATTTGGAGGGTGAC

Coding sequence (CDS)

ATGGGGAGAGCTCCTTGCTGTGACAAAGCCAGTGTCAAGAAAGGCCCATGGTCGACTGAAGAAGACACCAAGCTCAAGTCTTACATTGAGCAACATGGAACTGGTGGGAACTGGATTGCTTTGCCTCAAAAAATTGGCCTAAAGAGATGTGGAAAAAGTTGTCGATTGAGATGGCTAAATTATCTCCGTCCGAACATCAAGCATGGAGGTTTCTCCGAAGAAGAAGATAGAATCATTTGTAGTCTCTATCTTAGCATTGGAAGCAGGTGGTCTATAATTGCAGCACAGTTACCAGGAAGAACGGATAACGACATAAAGAACTACTGGAACACGAGGTTGAAGAAGAAGCTATTTGGGAAGCAAAGGAAAGAGCAGCAACAACAACAACAGGCATCTCGTCGAGGAAACGCCCTAAGGCATCACGGGACGGTGAATAAAAGCAATAGCACCATTCCTTATTGGCCTCAGCAGCAGCAGCAGCTCCCAGTGGCACCAAGCTACTATAACAACAACAACAACATGGCATCATCTGACCATATCAACCCAATTGAGAAATTGAGCAAATTTGGAGCTCAATTTATGGACGAAAGTGTGTACAACAACAATGCAAATGGGTATGGAAATGCGTATTATTTTCCATTGCTTCAAGGGCAAAGCAGCACCCAAATGGTGGATCTTGAGAATTATGACATGGGGTTTGATGATCCAAGAAGGGTTTTGTGTGGATTTGAGTTTGTGTATGGAGATCATCATAATCAGATAATGGGTACTAGTAATAGCCATGGCTATGAAATGGGGCCTCTTATTTCTTCTTGCCCTTCAAATTACGAAGCAATGCTGCAAGATTTGTCAACCACGACTCAAGAATATGATACTCACTTGAAGATATTGGATAGCAATGCAGTATGA

Protein sequence

MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQQQQQASRRGNALRHHGTVNKSNSTIPYWPQQQQQLPVAPSYYNNNNNMASSDHINPIEKLSKFGAQFMDESVYNNNANGYGNAYYFPLLQGQSSTQMVDLENYDMGFDDPRRVLCGFEFVYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKILDSNAV
Homology
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BLAST of CmaCh12G006200 vs. Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 4.7e-67
Identity = 130/221 (58.82%), Postives = 155/221 (70.14%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EED KLKSYIE  GTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEE+ IICSLYL+IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL  K
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINK 120

Query: 121 QRKEQQQ--QQQASRRGNALRHH-------GTVNKSNSTIPYWPQQQQQLPVAPSYYNNN 180
           QRKE Q+   +Q        R H         + + + T+  WP     + V   + N  
Sbjct: 121 QRKELQEACMEQQEMMVMMKRQHQQQQIQTSFMMRQDQTMFTWPLHHHNVQVPALFMNQT 180

Query: 181 NNMASSDHINP--IEKLSKFGAQFMDESVYNNNANGYGNAY 211
           N+    + + P  I+ + K   Q ++++  +++ +   NA+
Sbjct: 181 NSFCDQEDVKPVLIKNMVKIEDQELEKTNPHHHQDSMTNAF 221

[Close]
BLAST of CmaCh12G006200 vs. Swiss-Prot
Match: MYB36_ARATH (Transcription factor MYB36 OS=Arabidopsis thaliana GN=MYB36 PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.7e-64
Identity = 123/178 (69.10%), Postives = 139/178 (78.09%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EED KLK YI+++GTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEEDRII SLY+SIGSRWSIIAAQLPGRTDNDIKNYWNT+LKKKL G+
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 121 QRKEQQQQQQASRRGNALRHHGT----VNKSNSTIP----YWPQQQQQLPVAPSYYNN 171
           Q++  +Q        N L ++       N SNS +     +   Q  Q P + S+YNN
Sbjct: 121 QKQMNRQDSITDSTENNLSNNNNNKSPQNLSNSALERLQLHMQLQNLQSPFS-SFYNN 177

[Close]
BLAST of CmaCh12G006200 vs. Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.1e-55
Identity = 106/166 (63.86%), Postives = 120/166 (72.29%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VK+GPWS EED KLK YIE+ GTGGNWIALP K GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNI+HG F+EEED II SL+ SIGSRWS+IAA L GRTDNDIKNYWNT+LKKKL   
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIAT 120

Query: 121 QRKEQQQQ-----QQASRRGNALRHHGTVNKSNSTIPYWPQQQQQL 162
                          +S   ++  H+   N  NS +PY P   Q L
Sbjct: 121 MAPPPHHHLAIATSSSSASPSSSSHY---NMINSLLPYNPSTNQLL 163

[Close]
BLAST of CmaCh12G006200 vs. Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-53
Identity = 114/216 (52.78%), Postives = 138/216 (63.89%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDK  VK+GPWS EED+KL+ YIE++G GGNWI+ P K GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHG FSEEEDRII SL+ +IGSRWSIIAA LPGRTDNDIKNYWNT+L+KKL   
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSS 120

Query: 121 QRKEQQQQQQASRRGNALRHHGTVNKSNSTIPY-----WPQQQQQLPVAPSYYNNNNNMA 180
              +      AS   N +        S +TIP      + +   Q P   S  ++ N   
Sbjct: 121 S-SDSSSSAMASPYLNPISQDVKRPTSPTTIPSSSYNPYAENPNQYP-TKSLISSINGFE 180

Query: 181 SSD-----HINPIEKLSKFGAQFMDESVYNNNANGY 207
           + D     +INP      +     D +   +NANG+
Sbjct: 181 AGDKQIISYINPNYPQDLY---LSDSNNNTSNANGF 211

[Close]
BLAST of CmaCh12G006200 vs. Swiss-Prot
Match: MYB80_ARATH (Transcription factor MYB80 OS=Arabidopsis thaliana GN=MYB80 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.3e-45
Identity = 80/119 (67.23%), Postives = 96/119 (80.67%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGR PCC+K +VK+G W+ EED KL SYI QHGT  NW  +P+  GL+RCGKSCRLRW N
Sbjct: 1   MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTR-NWRLIPKNAGLQRCGKSCRLRWTN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFG 120
           YLRP++KHG FSE E+ II   +  +G+RWS+IAAQLPGRTDND+KNYWNT+LKKKL G
Sbjct: 61  YLRPDLKHGQFSEAEEHIIVKFHSVLGNRWSLIAAQLPGRTDNDVKNYWNTKLKKKLSG 118

[Close]
BLAST of CmaCh12G006200 vs. TrEMBL
Match: B9GNK5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s11440g PE=4 SV=2)

HSP 1 Score: 284.3 bits (726), Expect = 1.8e-73
Identity = 140/206 (67.96%), Postives = 159/206 (77.18%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EED KLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEED IICSLY+SIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL GK
Sbjct: 61  YLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 QRKEQQQQQQASRRGNALRHHG---TVNKSNSTIPYWPQQQQQLPVAPSYYNNNNNMASS 180
           QRKEQQ ++ +  +    R +G       +N+  PYWP    +LP+      +N+    +
Sbjct: 121 QRKEQQARRSSGLKQEMKRGNGNPVVPADNNNQNPYWP----ELPILAPIPYSNHEPHFN 180

Query: 181 DHINPIEKLSKFGAQFMDESVYNNNA 204
           DH +  + L K G +F D+   N+NA
Sbjct: 181 DHASIRKLLIKLGGKFSDDDQVNHNA 202

[Close]
BLAST of CmaCh12G006200 vs. TrEMBL
Match: A0A068TXF2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00034477001 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 2.0e-72
Identity = 149/237 (62.87%), Postives = 166/237 (70.04%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EED KLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEED IICSLY+SIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL GK
Sbjct: 61  YLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 QRKEQ------QQQQQASRRGNALRHHGTVNKSNSTI-----PYWPQQQQQLPVAPSYYN 180
           QRK+Q       Q+Q+  R+G     +  V+ S+S       PYWP    +LPV P    
Sbjct: 121 QRKDQHARKSTSQKQEMLRKGMRESINHMVSSSSSDYNSNQSPYWP----ELPVLPPVPY 180

Query: 181 NNNNMASSDHINPIEKLSKFGAQFMDESVYNNNANGYGNAYYFPLLQGQSSTQMVDL 227
           +N     +DH +  + L K G +F D+     N     N  Y PL    S  Q+  L
Sbjct: 181 SNEEPRFNDHASIRKLLIKLGGRFSDDDDQPTNGTMNTNLQY-PLDSTNSLVQVQPL 232

[Close]
BLAST of CmaCh12G006200 vs. TrEMBL
Match: A0A061FFF3_THECC (Myb domain protein 84 OS=Theobroma cacao GN=TCM_034634 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 4.4e-72
Identity = 154/245 (62.86%), Postives = 170/245 (69.39%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKASVKKGPWS EED KLK YIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKKGPWSPEEDAKLKEYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEED+IICSLY+SIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL GK
Sbjct: 61  YLRPNIKHGGFSEEEDKIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 QRKEQQQQQQASRRGNALRHHGTVNKSNSTI-------PYWPQQQQQLPV-APSYYNNNN 180
           QRKEQQ     SRRGN+L+        NS I       PYWP    +LPV AP  Y++ +
Sbjct: 121 QRKEQQ-----SRRGNSLKQEMKRGNGNSMIPDHNNQSPYWP----ELPVLAPIPYSSED 180

Query: 181 NMASSDHINPIEKLSKFGAQFMD-ESVYNNNANGYGNAYYFPLLQGQSSTQMVDLENYDM 237
               S   +    L K G +F + E V ++        + FP     SSTQ +  +   M
Sbjct: 181 QRIDS-QASMRRLLIKLGGRFSEAEHVISDGT----TLHQFP--NDSSSTQQLYEQTVHM 229

[Close]
BLAST of CmaCh12G006200 vs. TrEMBL
Match: E0CNX0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08470 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.7e-71
Identity = 141/236 (59.75%), Postives = 162/236 (68.64%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EED KLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNI+HGGFSEEED IICSLY+SIGSRWS+IAAQLPGRTDNDIKNYWNTRLKKKL GK
Sbjct: 61  YLRPNIRHGGFSEEEDNIICSLYISIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 QRKEQQQQQQASRRGNALRHHGT--VNKSNSTIPYWPQQQQQLPVAPSYYNNNNNMASSD 180
           QRKEQQ ++ +  +    R  G   V+ + +  PYWP    +LPV       N     +D
Sbjct: 121 QRKEQQARRGSCPKQEMKRASGNAMVSDNENLNPYWP----ELPVPAPIPYPNEEPRFND 180

Query: 181 HINPIEKLSKFGAQFMDESVYNNNANGYGNAYYFPLLQGQSSTQMVDLENYDMGFD 235
           H +    L + G +F D+                PL  G +    +D+ +    FD
Sbjct: 181 HSSIRRLLIRLGGRFSDDGQ--------------PLQNGTNLQLPIDISSVQQPFD 218

[Close]
BLAST of CmaCh12G006200 vs. TrEMBL
Match: A0A0B2RX08_GLYSO (Transcription factor RAX3 OS=Glycine soja GN=glysoja_003445 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 8.3e-71
Identity = 151/265 (56.98%), Postives = 171/265 (64.53%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EED KLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEED IICSLY+SIGSRWSIIAAQLPGRTDNDIKNYWNT+LKKKL GK
Sbjct: 61  YLRPNIKHGGFSEEEDNIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGK 120

Query: 121 QRKEQQQQQQASRRGNALRHHGTVNKSN---------STIPYWPQQQ---QQLPVAPS-- 180
           QRKEQQ Q QA R  N  +      ++          + +PYW   +     +PV  +  
Sbjct: 121 QRKEQQAQAQARRVSNNQQKQDLKRETENLVVASEVINQVPYWSSSEFSSVPMPVVNASF 180

Query: 181 --YYNNNNNMASSDHINPIEKLSKFGAQFMDESVYNNNANGYGNAYYFPLLQGQSSTQMV 240
             Y  NN     S  +N +E     G  F ++  +      Y NA   P LQ Q+   MV
Sbjct: 181 QHYGLNNQTSLGSMIVNKLE-----GITFSNDH-HQQQQQPYANACEIPSLQDQAFPTMV 240

Query: 241 D-----LENYDMGFDDPRRVLCGFE 245
           +         + G   P  +  GFE
Sbjct: 241 NQVTVVSNENNSGTYQPSNIFQGFE 259

[Close]
BLAST of CmaCh12G006200 vs. TAIR10
Match: AT3G49690.1 (AT3G49690.1 myb domain protein 84)

HSP 1 Score: 256.1 bits (653), Expect = 2.6e-68
Identity = 130/221 (58.82%), Postives = 155/221 (70.14%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EED KLKSYIE  GTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEE+ IICSLYL+IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL  K
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINK 120

Query: 121 QRKEQQQ--QQQASRRGNALRHH-------GTVNKSNSTIPYWPQQQQQLPVAPSYYNNN 180
           QRKE Q+   +Q        R H         + + + T+  WP     + V   + N  
Sbjct: 121 QRKELQEACMEQQEMMVMMKRQHQQQQIQTSFMMRQDQTMFTWPLHHHNVQVPALFMNQT 180

Query: 181 NNMASSDHINP--IEKLSKFGAQFMDESVYNNNANGYGNAY 211
           N+    + + P  I+ + K   Q ++++  +++ +   NA+
Sbjct: 181 NSFCDQEDVKPVLIKNMVKIEDQELEKTNPHHHQDSMTNAF 221

[Close]
BLAST of CmaCh12G006200 vs. TAIR10
Match: AT5G65790.1 (AT5G65790.1 myb domain protein 68)

HSP 1 Score: 246.5 bits (628), Expect = 2.1e-65
Identity = 112/127 (88.19%), Postives = 118/127 (92.91%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EED KLK YIE  GTGGNWIALPQKIGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEED IIC+LY++IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL  K
Sbjct: 61  YLRPNIKHGGFSEEEDNIICNLYVTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLNK 120

Query: 121 QRKEQQQ 128
           QRKE Q+
Sbjct: 121 QRKEFQE 127

[Close]
BLAST of CmaCh12G006200 vs. TAIR10
Match: AT5G57620.1 (AT5G57620.1 myb domain protein 36)

HSP 1 Score: 246.5 bits (628), Expect = 2.1e-65
Identity = 123/178 (69.10%), Postives = 139/178 (78.09%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EED KLK YI+++GTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEEDRII SLY+SIGSRWSIIAAQLPGRTDNDIKNYWNT+LKKKL G+
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 121 QRKEQQQQQQASRRGNALRHHGT----VNKSNSTIP----YWPQQQQQLPVAPSYYNN 171
           Q++  +Q        N L ++       N SNS +     +   Q  Q P + S+YNN
Sbjct: 121 QKQMNRQDSITDSTENNLSNNNNNKSPQNLSNSALERLQLHMQLQNLQSPFS-SFYNN 177

[Close]
BLAST of CmaCh12G006200 vs. TAIR10
Match: AT4G37780.1 (AT4G37780.1 myb domain protein 87)

HSP 1 Score: 238.0 bits (606), Expect = 7.4e-63
Identity = 111/149 (74.50%), Postives = 124/149 (83.22%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDK +VKKGPWSTEED  LKSYIE+HGTG NWI+LPQ+IG+KRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPN+KHGGF++EED IICSLY++IGSRWSIIA+QLPGRTDNDIKNYWNTRLKKKL  K
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK 120

Query: 121 QRKEQQQQQQASRRGNALRHHGTVNKSNS 150
           Q K   QQ       N     GT + S+S
Sbjct: 121 QGKAFHQQL------NVKFERGTTSSSSS 143

[Close]
BLAST of CmaCh12G006200 vs. TAIR10
Match: AT2G36890.1 (AT2G36890.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 216.9 bits (551), Expect = 1.8e-56
Identity = 106/166 (63.86%), Postives = 120/166 (72.29%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VK+GPWS EED KLK YIE+ GTGGNWIALP K GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNI+HG F+EEED II SL+ SIGSRWS+IAA L GRTDNDIKNYWNT+LKKKL   
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIAT 120

Query: 121 QRKEQQQQ-----QQASRRGNALRHHGTVNKSNSTIPYWPQQQQQL 162
                          +S   ++  H+   N  NS +PY P   Q L
Sbjct: 121 MAPPPHHHLAIATSSSSASPSSSSHY---NMINSLLPYNPSTNQLL 163

[Close]
BLAST of CmaCh12G006200 vs. NCBI nr
Match: gi|659087547|ref|XP_008444511.1| (PREDICTED: transcription factor RAX3-like [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 7.6e-102
Identity = 218/352 (61.93%), Postives = 247/352 (70.17%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EED KLKSYIE+HGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEEDRIICSLY+SIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK
Sbjct: 61  YLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120

Query: 121 QRKEQQQQQQASRRGNALR---------------------HHGTVNKS---------NST 180
           QRK+ QQQ   +RRGN ++                     H G  N S         N+ 
Sbjct: 121 QRKDHQQQA-ITRRGNGVKQMQQIKRSSENNNTTITTTIAHMGENNSSIFSLNHSHNNNI 180

Query: 181 IPYWPQQQQQLPVAPSYYNNNNNMASSDHINPIEK-LSKFGAQFMDE--SVY--NNNANG 240
           +PYWPQQQ  LP+AP + NN           PIE  LSKFG QFMD+  ++Y  NNN N 
Sbjct: 181 LPYWPQQQH-LPLAPHFNNNLTPFGK-----PIENDLSKFGVQFMDQESNLYSSNNNNNE 240

Query: 241 YGNAY--YFPLLQGQSS---TQMVDLENYD--MGFDDPRRVLCGFEFVYGDHHNQIMGTS 300
            GN Y  Y P++QGQSS   +QMV++ENY+    ++DPRRVLCG EF+YGDHH  IM  +
Sbjct: 241 NGNEYGNYIPIMQGQSSSSNSQMVEIENYNNMANYEDPRRVLCGLEFLYGDHH--IMSGN 300

Query: 301 NSHGYEMGPLISSCPSNY-EAMLQDLS----TTTQEYDT---HLKILDSNAV 303
           N+        ISSC  NY E +LQDLS    TTTQEY      L+ILD+NA+
Sbjct: 301 NN-----DLQISSCLPNYEEILLQDLSTTTTTTTQEYGAKFDDLRILDNNAL 338

[Close]
BLAST of CmaCh12G006200 vs. NCBI nr
Match: gi|449450570|ref|XP_004143035.1| (PREDICTED: transcription factor RAX3-like [Cucumis sativus])

HSP 1 Score: 378.6 bits (971), Expect = 9.9e-102
Identity = 216/350 (61.71%), Postives = 247/350 (70.57%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EED KLKSYIE+HGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEEDRIICSLY+SIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK
Sbjct: 61  YLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120

Query: 121 QRKEQQQQQQASRRGNALR--------------------HHGTVNKS---------NSTI 180
           QRK+ QQQ   +RRGN ++                    H G  N S         N+ +
Sbjct: 121 QRKDHQQQA-ITRRGNGVKQMQQMKRSSENNNATITTIAHMGENNSSIFSLNQSHNNNIL 180

Query: 181 PYWPQQQQQLPVAPSYYNNNNNMASSDHINPIEKLSKFGAQFMDE--SVY--NNNANGYG 240
           PYWPQQQ  LP+AP +   N+N+           LSKFG QFMD+  ++Y  NNN NG G
Sbjct: 181 PYWPQQQH-LPLAPHF---NSNLTPFGKPIIENDLSKFGVQFMDQESNLYSSNNNNNGNG 240

Query: 241 NAY--YFPLLQGQSS---TQMVDLENYD--MGFDDPRRVLCGFEFVYGDHHNQIMGTSNS 300
           N Y  Y P++QGQSS   +QMV++ENY+    ++DPRRVLCG EF+YGDHH  IM  +N+
Sbjct: 241 NEYGNYLPIMQGQSSSSNSQMVEIENYNNMANYEDPRRVLCGLEFLYGDHH--IMSGNNN 300

Query: 301 HGYEMGPLISSCPSNY-EAMLQDLS----TTTQEYDT---HLKILDSNAV 303
                   ISSC  NY E +LQDLS    TTTQEY      L+ILD+NA+
Sbjct: 301 -----DLQISSCLPNYEEILLQDLSTTTTTTTQEYGAKFDDLRILDNNAL 338

[Close]
BLAST of CmaCh12G006200 vs. NCBI nr
Match: gi|566157469|ref|XP_002301137.2| (hypothetical protein POPTR_0002s11440g [Populus trichocarpa])

HSP 1 Score: 284.3 bits (726), Expect = 2.5e-73
Identity = 140/206 (67.96%), Postives = 159/206 (77.18%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EED KLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEED IICSLY+SIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL GK
Sbjct: 61  YLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 QRKEQQQQQQASRRGNALRHHG---TVNKSNSTIPYWPQQQQQLPVAPSYYNNNNNMASS 180
           QRKEQQ ++ +  +    R +G       +N+  PYWP    +LP+      +N+    +
Sbjct: 121 QRKEQQARRSSGLKQEMKRGNGNPVVPADNNNQNPYWP----ELPILAPIPYSNHEPHFN 180

Query: 181 DHINPIEKLSKFGAQFMDESVYNNNA 204
           DH +  + L K G +F D+   N+NA
Sbjct: 181 DHASIRKLLIKLGGKFSDDDQVNHNA 202

[Close]
BLAST of CmaCh12G006200 vs. NCBI nr
Match: gi|661895190|emb|CDP00995.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 280.8 bits (717), Expect = 2.8e-72
Identity = 149/237 (62.87%), Postives = 166/237 (70.04%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EED KLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEED IICSLY+SIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL GK
Sbjct: 61  YLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 QRKEQ------QQQQQASRRGNALRHHGTVNKSNSTI-----PYWPQQQQQLPVAPSYYN 180
           QRK+Q       Q+Q+  R+G     +  V+ S+S       PYWP    +LPV P    
Sbjct: 121 QRKDQHARKSTSQKQEMLRKGMRESINHMVSSSSSDYNSNQSPYWP----ELPVLPPVPY 180

Query: 181 NNNNMASSDHINPIEKLSKFGAQFMDESVYNNNANGYGNAYYFPLLQGQSSTQMVDL 227
           +N     +DH +  + L K G +F D+     N     N  Y PL    S  Q+  L
Sbjct: 181 SNEEPRFNDHASIRKLLIKLGGRFSDDDDQPTNGTMNTNLQY-PLDSTNSLVQVQPL 232

[Close]
BLAST of CmaCh12G006200 vs. NCBI nr
Match: gi|590596703|ref|XP_007018408.1| (Myb domain protein 84 [Theobroma cacao])

HSP 1 Score: 279.6 bits (714), Expect = 6.3e-72
Identity = 154/245 (62.86%), Postives = 170/245 (69.39%), Query Frame = 1 

Query: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKASVKKGPWS EED KLK YIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKKGPWSPEEDAKLKEYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEED+IICSLY+SIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL GK
Sbjct: 61  YLRPNIKHGGFSEEEDKIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 QRKEQQQQQQASRRGNALRHHGTVNKSNSTI-------PYWPQQQQQLPV-APSYYNNNN 180
           QRKEQQ     SRRGN+L+        NS I       PYWP    +LPV AP  Y++ +
Sbjct: 121 QRKEQQ-----SRRGNSLKQEMKRGNGNSMIPDHNNQSPYWP----ELPVLAPIPYSSED 180

Query: 181 NMASSDHINPIEKLSKFGAQFMD-ESVYNNNANGYGNAYYFPLLQGQSSTQMVDLENYDM 237
               S   +    L K G +F + E V ++        + FP     SSTQ +  +   M
Sbjct: 181 QRIDS-QASMRRLLIKLGGRFSEAEHVISDGT----TLHQFP--NDSSSTQQLYEQTVHM 229

The following BLAST results are available for this feature:
BLAST of CmaCh12G006200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAX3_ARATH4.7e-6758.82Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1[more]
MYB36_ARATH3.7e-6469.10Transcription factor MYB36 OS=Arabidopsis thaliana GN=MYB36 PE=1 SV=1[more]
RAX2_ARATH3.1e-5563.86Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1[more]
RAX1_ARATH1.3e-5352.78Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1[more]
MYB80_ARATH1.3e-4567.23Transcription factor MYB80 OS=Arabidopsis thaliana GN=MYB80 PE=1 SV=1[more]
BLAST of CmaCh12G006200 vs. TrEMBL
Match NameE-valueIdentityDescription
B9GNK5_POPTR1.8e-7367.96Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s11440g PE=4 SV=2[more]
A0A068TXF2_COFCA2.0e-7262.87Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00034477001 PE=4 SV=1[more]
A0A061FFF3_THECC4.4e-7262.86Myb domain protein 84 OS=Theobroma cacao GN=TCM_034634 PE=4 SV=1[more]
E0CNX0_VITVI3.7e-7159.75Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08470 PE=4 SV=... [more]
A0A0B2RX08_GLYSO8.3e-7156.98Transcription factor RAX3 OS=Glycine soja GN=glysoja_003445 PE=4 SV=1[more]
BLAST of CmaCh12G006200 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G49690.12.6e-6858.82 myb domain protein 84[more]
AT5G65790.12.1e-6588.19 myb domain protein 68[more]
AT5G57620.12.1e-6569.10 myb domain protein 36[more]
AT4G37780.17.4e-6374.50 myb domain protein 87[more]
AT2G36890.11.8e-5663.86 Duplicated homeodomain-like superfamily protein[more]
BLAST of CmaCh12G006200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659087547|ref|XP_008444511.1|7.6e-10261.93PREDICTED: transcription factor RAX3-like [Cucumis melo][more]
gi|449450570|ref|XP_004143035.1|9.9e-10261.71PREDICTED: transcription factor RAX3-like [Cucumis sativus][more]
gi|566157469|ref|XP_002301137.2|2.5e-7367.96hypothetical protein POPTR_0002s11440g [Populus trichocarpa][more]
gi|661895190|emb|CDP00995.1|2.8e-7262.87unnamed protein product [Coffea canephora][more]
gi|590596703|ref|XP_007018408.1|6.3e-7262.86Myb domain protein 84 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G006200.1CmaCh12G006200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 69..111
score: 1.8E-10coord: 14..62
score: 1.2
IPR001005SANT/Myb domainSMARTSM00717santcoord: 13..64
score: 3.3E-12coord: 67..115
score: 1.2
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 70..117
score: 1.7E-23coord: 15..69
score: 2.8
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 11..109
score: 1.25
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 9..62
score: 13.147coord: 63..117
score: 21
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 249..289
score: 2.0E-118coord: 1..175
score: 2.0E
NoneNo IPR availablePANTHERPTHR10641:SF654TRANSCRIPTION FACTOR RAX1-RELATEDcoord: 249..289
score: 2.0E-118coord: 1..175
score: 2.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh12G006200Cucsa.395340Cucumber (Gy14) v1cgycmaB1088
CmaCh12G006200Cla022655Watermelon (97103) v1cmawmB148
CmaCh12G006200Csa4G645320Cucumber (Chinese Long) v2cmacuB185
CmaCh12G006200Csa2G352950Cucumber (Chinese Long) v2cmacuB174
CmaCh12G006200MELO3C010777Melon (DHL92) v3.5.1cmameB156
CmaCh12G006200ClCG08G016790Watermelon (Charleston Gray)cmawcgB169
CmaCh12G006200CSPI02G18250Wild cucumber (PI 183967)cmacpiB175
CmaCh12G006200CmoCh03G009230Cucurbita moschata (Rifu)cmacmoB188
CmaCh12G006200CmoCh07G006280Cucurbita moschata (Rifu)cmacmoB204
CmaCh12G006200CmoCh01G018180Cucurbita moschata (Rifu)cmacmoB184
CmaCh12G006200CmoCh12G005570Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G006200CmoCh05G001200Cucurbita moschata (Rifu)cmacmoB199
CmaCh12G006200Lsi08G015570Bottle gourd (USVL1VR-Ls)cmalsiB184
CmaCh12G006200Lsi04G014470Bottle gourd (USVL1VR-Ls)cmalsiB174
CmaCh12G006200Cp4.1LG11g00960Cucurbita pepo (Zucchini)cmacpeB179
CmaCh12G006200Cp4.1LG07g04790Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G006200MELO3C010777.2Melon (DHL92) v3.6.1cmamedB170
CmaCh12G006200MELO3C016847.2Melon (DHL92) v3.6.1cmamedB198
CmaCh12G006200MELO3C007663.2Melon (DHL92) v3.6.1cmamedB200
CmaCh12G006200CsaV3_2G025830Cucumber (Chinese Long) v3cmacucB0203
CmaCh12G006200CsaV3_6G044410Cucumber (Chinese Long) v3cmacucB0221
CmaCh12G006200CsaV3_4G035370Cucumber (Chinese Long) v3cmacucB0215
CmaCh12G006200Cla97C08G160470Watermelon (97103) v2cmawmbB194
CmaCh12G006200Cla97C01G017110Watermelon (97103) v2cmawmbB160
CmaCh12G006200Bhi09G002612Wax gourdcmawgoB0228
CmaCh12G006200Bhi04G000429Wax gourdcmawgoB0194
CmaCh12G006200Bhi03G000827Wax gourdcmawgoB0217
CmaCh12G006200Carg00764Silver-seed gourdcarcmaB0557
CmaCh12G006200Carg11905Silver-seed gourdcarcmaB0249
CmaCh12G006200Carg18522Silver-seed gourdcarcmaB0002
CmaCh12G006200Carg10667Silver-seed gourdcarcmaB1067
CmaCh12G006200Carg16374Silver-seed gourdcarcmaB0631
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh12G006200CmaCh01G017630Cucurbita maxima (Rimu)cmacmaB180
CmaCh12G006200CmaCh03G008830Cucurbita maxima (Rimu)cmacmaB186
CmaCh12G006200CmaCh05G001160Cucurbita maxima (Rimu)cmacmaB199
CmaCh12G006200CmaCh07G006240Cucurbita maxima (Rimu)cmacmaB206
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G006200Cucurbita maxima (Rimu)cmacmaB033
CmaCh12G006200Cucurbita maxima (Rimu)cmacmaB182
CmaCh12G006200Cucumber (Gy14) v1cgycmaB0224
CmaCh12G006200Cucumber (Gy14) v1cgycmaB0962
CmaCh12G006200Cucurbita moschata (Rifu)cmacmoB164
CmaCh12G006200Wild cucumber (PI 183967)cmacpiB187
CmaCh12G006200Wild cucumber (PI 183967)cmacpiB197
CmaCh12G006200Cucumber (Chinese Long) v2cmacuB194
CmaCh12G006200Melon (DHL92) v3.5.1cmameB184
CmaCh12G006200Melon (DHL92) v3.5.1cmameB182
CmaCh12G006200Watermelon (Charleston Gray)cmawcgB153
CmaCh12G006200Watermelon (97103) v1cmawmB166
CmaCh12G006200Cucurbita pepo (Zucchini)cmacpeB168
CmaCh12G006200Cucurbita pepo (Zucchini)cmacpeB192
CmaCh12G006200Cucurbita pepo (Zucchini)cmacpeB199
CmaCh12G006200Cucumber (Gy14) v2cgybcmaB179
CmaCh12G006200Cucumber (Gy14) v2cgybcmaB479
CmaCh12G006200Cucumber (Gy14) v2cgybcmaB715
CmaCh12G006200Silver-seed gourdcarcmaB0449
CmaCh12G006200Cucumber (Chinese Long) v3cmacucB0232