CmaCh12G001550 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G001550
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	BAG family molecular chaperone regulator 3
Location	Cma_Chr12 : 679891 .. 681316 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCAAACACAAGAAAAAACAACATAGCCCATTTAGAGCCATGGTTCCCTTTCAATCCCACCCTTCTTCTCTAAATGACAAGAGATCAGAAGTTCGAGACCCTTCCGAGAATTTAGCAAAGAAGAGGAAGTGGGAACAACCGTTGCAACCGCCACAGATCAATTCCATATTCGATATCGAGCTTCACCTCGAAACTCCGTTACCTTTCGATTGGCAACGATGTCTTGACATTCAGGTGTTGCTATATATACAATTTTCTTTTCAACATCGTTTATCTTAATGTAAATTTATCATAATCTATTAGTTTAAGCTTTTGAGCCTAATTGGTTATTGGTACTAATTCTTTTTTAGTCAGGGAAGATACATTTCTATAACACGACGACTCAGAAGAGAACGTCGAAGGATCCAAGGGACAAGCTTGATATAGACGATGACGTCGAGGGAGATGAAAGCAACGAGGACATGAGTTTGGACCTCGAGCTCAACTTGACATGCGAATCGCTCGACAAGAACAACAATCAAACAACACAAGGAGGGCGGCGAGCCATAGGTGGAATGTTCGGCTCGTCGGAAAATTACAAGCAGCAAACGGAGATGGTGGCCGCCGTTTGCATGAGGTGTCACTTGTTAGTGATGATGTGTAAATCTTCGCCGGAGTGTCCTAACTGCAAATTCATAAACTCGCCGGAGCAGACCTCGCCGGCGATGTTAAAACGCCGGTGCTACCTTTCTTGGTAAAGTGGTAATTATAATTAAAACTTTCCTTCTTTAATTTGTGTTATTGTCATCAACTTTTTTTAAAAAAATTATATGGGGAGGTTTGTAATATGTAAATATACAAATTCATGTTTTTATTTGTTATAAAAACGTCAAAAACGTTCCTTCAAATTGGTTTGTCGGTGAAAGACGAGAAAGAAAAACGAAATATTTCGATACAATTCAATTCTCTTTGATGTGAAAAAACGAAGCTCCATGCTACCTTCCTACATATTTATAACGGGCAGACTAAAACCTACCTGATTTTTCTTATATATCTCGATCTTTCTCGTTTCTCGTAGATGTAAGAACAATATTTGCACTCTCAGTAATCATCTCGAGTACTTTACATAGTTATCAACGAATTATTAGGGTTTAGACTTACTCCGTGCAATGCCATATTCCACTGTTAAGCCATTAGTAATCGTAAGAGCACTGCAAAACAATTCACAGATAACTCGAGATGGGTACGTGTTTATCTTTCTTCATTACACTATGCACACTTGTCGAAGTTCTTGTTAAACGTAGAGTAAATCATATTTGTGTATAGTAAGATAATCTAGTGATTTACTAGTTTGTTACCAAATCTATGATTTACTGGTTTGTTACCAAATATATGATTTCATAGTTATTTGGTTTGTTACCAAATCTATGATTTCATAGCTTT

mRNA sequence

ATGTCCCAAACACAAGAAAAAACAACATAGCCCATTTAGAGCCATGGTTCCCTTTCAATCCCACCCTTCTTCTCTAAATGACAAGAGATCAGAAGTTCGAGACCCTTCCGAGAATTTAGCAAAGAAGAGGAAGTGGGAACAACCGTTGCAACCGCCACAGATCAATTCCATATTCGATATCGAGCTTCACCTCGAAACTCCGTTACCTTTCGATTGGCAACGATGTCTTGACATTCAGTCAGGGAAGATACATTTCTATAACACGACGACTCAGAAGAGAACGTCGAAGGATCCAAGGGACAAGCTTGATATAGACGATGACGTCGAGGGAGATGAAAGCAACGAGGACATGAGTTTGGACCTCGAGCTCAACTTGACATGCGAATCGCTCGACAAGAACAACAATCAAACAACACAAGGAGGGCGGCGAGCCATAGGTGGAATGTTCGGCTCGTCGGAAAATTACAAGCAGCAAACGGAGATGGTGGCCGCCGTTTGCATGAGGTGTCACTTGTTAGTGATGATGTGTAAATCTTCGCCGGAGTGTCCTAACTGCAAATTCATAAACTCGCCGGAGCAGACCTCGCCGGCGATGTTAAAACGCCGGTGCTACCTTTCTTGGTAAAGTGGTAATTATAATTAAAACTTTCCTTCTTTAATTTGTGTTATTGTCATCAACTTTTTTTAAAAAAATTATATGGGGAGGTTTGTAATATGTAAATATACAAATTCATGTTTTTATTTGTTATAAAAACGTCAAAAACGTTCCTTCAAATTGGTTTGTCGGTGAAAGACGAGAAAGAAAAACGAAATATTTCGATACAATTCAATTCTCTTTGATGTGAAAAAACGAAGCTCCATGCTACCTTCCTACATATTTATAACGGGCAGACTAAAACCTACCTGATTTTTCTTATATATCTCGATCTTTCTCGTTTCTCGTAGATGTAAGAACAATATTTGCACTCTCAGTAATCATCTCGAGTACTTTACATAGTTATCAACGAATTATTAGGGTTTAGACTTACTCCGTGCAATGCCATATTCCACTGTTAAGCCATTAGTAATCGTAAGAGCACTGCAAAACAATTCACAGATAACTCGAGATGGGTACGTGTTTATCTTTCTTCATTACACTATGCACACTTGTCGAAGTTCTTGTTAAACGTAGAGTAAATCATATTTGTGTATAGTAAGATAATCTAGTGATTTACTAGTTTGTTACCAAATCTATGATTTACTGGTTTGTTACCAAATATATGATTTCATAGTTATTTGGTTTGTTACCAAATCTATGATTTCATAGCTTT

Coding sequence (CDS)

ATGGTTCCCTTTCAATCCCACCCTTCTTCTCTAAATGACAAGAGATCAGAAGTTCGAGACCCTTCCGAGAATTTAGCAAAGAAGAGGAAGTGGGAACAACCGTTGCAACCGCCACAGATCAATTCCATATTCGATATCGAGCTTCACCTCGAAACTCCGTTACCTTTCGATTGGCAACGATGTCTTGACATTCAGTCAGGGAAGATACATTTCTATAACACGACGACTCAGAAGAGAACGTCGAAGGATCCAAGGGACAAGCTTGATATAGACGATGACGTCGAGGGAGATGAAAGCAACGAGGACATGAGTTTGGACCTCGAGCTCAACTTGACATGCGAATCGCTCGACAAGAACAACAATCAAACAACACAAGGAGGGCGGCGAGCCATAGGTGGAATGTTCGGCTCGTCGGAAAATTACAAGCAGCAAACGGAGATGGTGGCCGCCGTTTGCATGAGGTGTCACTTGTTAGTGATGATGTGTAAATCTTCGCCGGAGTGTCCTAACTGCAAATTCATAAACTCGCCGGAGCAGACCTCGCCGGCGATGTTAAAACGCCGGTGCTACCTTTCTTGGTAA

Protein sequence

MVPFQSHPSSLNDKRSEVRDPSENLAKKRKWEQPLQPPQINSIFDIELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESNEDMSLDLELNLTCESLDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW

Homology

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BLAST of CmaCh12G001550 vs. TrEMBL
Match: A0A0A0LNT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368900 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.9e-74
Identity = 152/208 (73.08%), Postives = 172/208 (82.69%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDK-RSEVRDPSENLAKKRKWEQPLQP-PQINSIFDIELHLETPLPFDW 60
           MVPFQSHPSSLNDK  S +++P++NLAKKRKWE+ + P P +NS+ DIELHLETPLPF W
Sbjct: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESMIPTPPLNSVLDIELHLETPLPFYW 60

Query: 61  QRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESN-----EDMSLDLELNLTC 120
           QRCLDIQSGKIHFYN TTQKRT KDPRDKL+ DDD + +E +      DMSLDLELNLTC
Sbjct: 61  QRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDMSLDLELNLTC 120

Query: 121 ESLDKNNN-QTTQGGRRAI--GGMFGSSENY----KQQTEMVAAVCMRCHLLVMMCKSSP 180
           ES++KNNN QT QG RRAI  G MFG SENY     ++ EMVAAVCMRCHLLVM+CKSSP
Sbjct: 121 ESMEKNNNHQTVQGVRRAINDGMMFGLSENYNHNNNKKAEMVAAVCMRCHLLVMLCKSSP 180

Query: 181 ECPNCKFINS-PEQTSPAMLKRRCYLSW 194
           ECPNCKF+NS PEQTSPAM KRRC+LSW
Sbjct: 181 ECPNCKFMNSPPEQTSPAMSKRRCHLSW 208

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BLAST of CmaCh12G001550 vs. TrEMBL
Match: E0CRK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g05580 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.9e-38
Identity = 101/215 (46.98%), Postives = 125/215 (58.14%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKRSEVRDPSENLAKKRKWEQP---------LQPPQINSIFDIELHLE 60
           MV FQ+ P S +  R  V +  ENL+KKRKWE+           +     SIFDIEL LE
Sbjct: 1   MVSFQT-PLSPDPTRPIVSE-FENLSKKRKWEKTGTEEVFKLQSKAKSTKSIFDIELQLE 60

Query: 61  TPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESNEDMSLDLELNL 120
           TPLP +WQRCLDIQSG+IHFYNT T KRTS+DPR   +         S   MSL+LELNL
Sbjct: 61  TPLPLEWQRCLDIQSGQIHFYNTRTHKRTSRDPRASPE-------PPSPGPMSLELELNL 120

Query: 121 TCESLDKNNNQTTQGGRRAIGGMFGSSENYKQQT------------------EMVAAVCM 180
            C+SL +N      G   +      S E+ +++                   EMVAAVC 
Sbjct: 121 PCDSLRRNRPDDNMGKWNSGSPSHNSKESLQKKNPGGVACSPSWLAFEGDNQEMVAAVCK 180

Query: 181 RCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRR 189
           RCH+LVM+CKSSP CPNCKF++ P+QT P + KRR
Sbjct: 181 RCHMLVMLCKSSPTCPNCKFMHPPDQTPPNLFKRR 206

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BLAST of CmaCh12G001550 vs. TrEMBL
Match: A0A0D2QM72_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G237500 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-36
Identity = 100/223 (44.84%), Postives = 124/223 (55.61%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKRSEVRDPSENLAKKRKWEQPLQ------------PPQINSIFDIEL 60
           M+ FQ+ P S +D   +     +N +KKRK E+  Q               I S+FD+EL
Sbjct: 1   MISFQA-PLSPSDMIGKTISEFDNSSKKRKLEEDSQGDHEETSDKRSKAESIKSVFDMEL 60

Query: 61  HLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESNEDMSLDLE 120
           HLETPLP +WQRCLDIQSG+IHFYNT T KRTSKDPR   +    V        MSLDLE
Sbjct: 61  HLETPLPLEWQRCLDIQSGQIHFYNTRTHKRTSKDPRRSPEPPSPVH-------MSLDLE 120

Query: 121 LNLTCESLDKN---------NNQTTQGGRRA---------IGGM------FGSSENYKQQ 180
           LNL C+S  +          N   + G  RA          GG+          EN +Q 
Sbjct: 121 LNLPCDSSVRKVNEKDHQLFNKHNSVGPTRAGSVDKKINSSGGLTRNLSWLAVEENDQQD 180

Query: 181 TEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKR 188
            EMVA VCMRCH+LVM+CKSSP CPNCKF++ P+Q  P + K+
Sbjct: 181 QEMVATVCMRCHMLVMLCKSSPACPNCKFMHPPDQGPPKLFKQ 215

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BLAST of CmaCh12G001550 vs. TrEMBL
Match: A0A061FG18_THECC (E3 ubiquitin-protein ligase HUWE1, putative OS=Theobroma cacao GN=TCM_034911 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.2e-36
Identity = 94/212 (44.34%), Postives = 122/212 (57.55%), Query Frame = 1


Query: 13  DKRSEVRDPSENLAKKRKWEQPL----------QPPQINSIFDIELHLETPLPFDWQRCL 72
           D R    D  EN +KKRK ++P           +     S+FD+ELHLETPLP +WQRCL
Sbjct: 11  DMRKTTPDQLENSSKKRKLDEPQGDEETFEKRSKAASTKSVFDMELHLETPLPLEWQRCL 70

Query: 73  DIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESNEDMSLDLELNLTCESL------ 132
           DIQSG+IHFYNT T  RT KDPR   +         S   MSLDLELNL C+S+      
Sbjct: 71  DIQSGQIHFYNTRTHTRTCKDPRRSPE-------PPSPRHMSLDLELNLPCDSVRKTNAT 130

Query: 133 -----DKNNNQTTQGGR-----RAIGGMFGSS-------ENYKQQTEMVAAVCMRCHLLV 192
                DK+N+ + +         + GG+   S       E+ ++Q EMVA VCMRCH+LV
Sbjct: 131 DHHQFDKHNSVSPRSDSVDKKINSTGGLTTQSLSWLAVEEDDQKQQEMVATVCMRCHMLV 190

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BLAST of CmaCh12G001550 vs. TrEMBL
Match: A0A0D2S760_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G237500 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.2e-35
Identity = 94/201 (46.77%), Postives = 114/201 (56.72%), Query Frame = 1


Query: 23  ENLAKKRKWEQPLQ------------PPQINSIFDIELHLETPLPFDWQRCLDIQSGKIH 82
           +N +KKRK E+  Q               I S+FD+ELHLETPLP +WQRCLDIQSG+IH
Sbjct: 10  DNSSKKRKLEEDSQGDHEETSDKRSKAESIKSVFDMELHLETPLPLEWQRCLDIQSGQIH 69

Query: 83  FYNTTTQKRTSKDPRDKLDIDDDVEGDESNEDMSLDLELNLTCESLDKN---------NN 142
           FYNT T KRTSKDPR   +    V        MSLDLELNL C+S  +          N 
Sbjct: 70  FYNTRTHKRTSKDPRRSPEPPSPVH-------MSLDLELNLPCDSSVRKVNEKDHQLFNK 129

Query: 143 QTTQGGRRA---------IGGM------FGSSENYKQQTEMVAAVCMRCHLLVMMCKSSP 188
             + G  RA          GG+          EN +Q  EMVA VCMRCH+LVM+CKSSP
Sbjct: 130 HNSVGPTRAGSVDKKINSSGGLTRNLSWLAVEENDQQDQEMVATVCMRCHMLVMLCKSSP 189

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BLAST of CmaCh12G001550 vs. TAIR10
Match: AT4G08910.1 (AT4G08910.1 unknown protein)

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12
Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 1


Query: 136 GSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAML 186
           G     + + EMVA VCM+CH+LVM+CK+SP CPNCKF++SPE TS ++L
Sbjct: 154 GDGVGGRSEEEMVARVCMKCHMLVMLCKASPACPNCKFMHSPEDTSLSLL 203

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BLAST of CmaCh12G001550 vs. TAIR10
Match: AT1G78170.1 (AT1G78170.1 unknown protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10
Identity = 57/196 (29.08%), Postives = 91/196 (46.43%), Query Frame = 1


Query: 14  KRSEVRDPSENLAKKRKWEQPLQPPQINSIFDIELHLETPLPFDWQRCLDIQSGKIHFYN 73
           K+S+  D S++       E+P      +  FD ELHL TPLP DWQ        K +   
Sbjct: 28  KKSKQEDQSQSTLFN---ERPKSESMRSITFDFELHLHTPLPSDWQT-------KGYSRT 87

Query: 74  TTTQKRTSKDP----RDKLDIDDDVE----GDESNEDMSLDLELNLTCESLDKNNNQT-T 133
           +   +   KDP    + K+ +D ++     G  S          ++  E++  +  +  T
Sbjct: 88  SDEHRAYPKDPVIFGQPKMSLDLELNLSPSGSPSRTTTKKYESSSIHNETVSSSKIKVLT 147

Query: 134 QGGRRAIGG-----------MFGSSEN---YKQQTEMVAAVCMRCHLLVMMCKSSPECPN 187
              +++I G             G  +N   +K Q EMV  VCM+CH+LVM+C S+P CPN
Sbjct: 148 NTSKKSIIGTGLSRSPSWLAFEGGDDNDVDHKGQ-EMVTTVCMKCHMLVMLCTSTPVCPN 207

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BLAST of CmaCh12G001550 vs. TAIR10
Match: AT1G22250.1 (AT1G22250.1 unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.4e-06
Identity = 36/119 (30.25%), Postives = 57/119 (47.90%), Query Frame = 1


Query: 76  TQKRTSKDPRDKLDIDDDVEGDESNEDMSLDLELNLTCESLDKNNNQTTQGGRRAIGGMF 135
           TQ  T +D R  LD++ ++    S+      +E     +   K         ++   G  
Sbjct: 73  TQSETFEDHRTDLDLNLNLYSSSSSSVKKTIMEK----DECSKGGTVIISPSKKVRSGDI 132

Query: 136 GSS-------------ENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTS 182
           G S             +N K+Q EM+  VCM+CH+LVM+CKS+  CPNCKF++  + +S
Sbjct: 133 GLSRSPSWLAFEGDDDDNQKKQ-EMITTVCMKCHMLVMLCKSTLVCPNCKFMHHDDHSS 186

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BLAST of CmaCh12G001550 vs. NCBI nr
Match: gi|659088139|ref|XP_008444823.1| (PREDICTED: uncharacterized protein LOC103488058 [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74
Identity = 153/211 (72.51%), Postives = 172/211 (81.52%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKRSEVRDPSENLAKKRKWEQPL--QPPQINSIFDIELHLETPLPFDW 60
           MVPFQSHPSSLNDK S +++P++NLAKKRKWE+ +   PP +NS+ DIELHLETPLPF W
Sbjct: 1   MVPFQSHPSSLNDKTSAIQEPADNLAKKRKWEESMVPTPPPLNSVLDIELHLETPLPFYW 60

Query: 61  QRCLDIQSGKIHFYNTTTQKRTSKDPRDKL----DIDDDVEGDESN----EDMSLDLELN 120
           QRCLDIQSGKIHFYN TTQKRT +DPRDKL    D DDD EG + +     DMSLDLELN
Sbjct: 61  QRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKNDMSLDLELN 120

Query: 121 LTCESLDK-NNNQTTQGGRRAI--GGMFGSSENY----KQQTEMVAAVCMRCHLLVMMCK 180
           LTCES+DK NNNQT QG RRAI  G +FG SENY     ++ EMVAAVCMRCHLLVM+CK
Sbjct: 121 LTCESMDKNNNNQTVQGVRRAINNGMVFGLSENYNNNNNKKAEMVAAVCMRCHLLVMLCK 180

Query: 181 SSPECPNCKFINS-PEQTSPAMLKRRCYLSW 194
           SSPECPNCKF+NS PEQTSPAM KRRC+LSW
Sbjct: 181 SSPECPNCKFMNSPPEQTSPAMSKRRCHLSW 211

[Close]

BLAST of CmaCh12G001550 vs. NCBI nr
Match: gi|449469873|ref|XP_004152643.1| (PREDICTED: uncharacterized protein LOC101203360 [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 5.6e-74
Identity = 152/208 (73.08%), Postives = 172/208 (82.69%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDK-RSEVRDPSENLAKKRKWEQPLQP-PQINSIFDIELHLETPLPFDW 60
           MVPFQSHPSSLNDK  S +++P++NLAKKRKWE+ + P P +NS+ DIELHLETPLPF W
Sbjct: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESMIPTPPLNSVLDIELHLETPLPFYW 60

Query: 61  QRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESN-----EDMSLDLELNLTC 120
           QRCLDIQSGKIHFYN TTQKRT KDPRDKL+ DDD + +E +      DMSLDLELNLTC
Sbjct: 61  QRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDMSLDLELNLTC 120

Query: 121 ESLDKNNN-QTTQGGRRAI--GGMFGSSENY----KQQTEMVAAVCMRCHLLVMMCKSSP 180
           ES++KNNN QT QG RRAI  G MFG SENY     ++ EMVAAVCMRCHLLVM+CKSSP
Sbjct: 121 ESMEKNNNHQTVQGVRRAINDGMMFGLSENYNHNNNKKAEMVAAVCMRCHLLVMLCKSSP 180

Query: 181 ECPNCKFINS-PEQTSPAMLKRRCYLSW 194
           ECPNCKF+NS PEQTSPAM KRRC+LSW
Sbjct: 181 ECPNCKFMNSPPEQTSPAMSKRRCHLSW 208

[Close]

BLAST of CmaCh12G001550 vs. NCBI nr
Match: gi|470132092|ref|XP_004301920.1| (PREDICTED: uncharacterized protein LOC101299013 [Fragaria vesca subsp. vesca])

HSP 1 Score: 171.0 bits (432), Expect = 2.0e-39
Identity = 98/203 (48.28%), Postives = 126/203 (62.07%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKRSEVRDPSENLAKKRKWEQPLQPPQIN-------------SIFDIE 60
           MV FQ+ P S N KRS + D SEN  KKRKW+ P    +++             S FD+E
Sbjct: 1   MVSFQAQPLSPNQKRS-ITDDSENSCKKRKWDDPFPFLELDKRSKPAADQIRPKSFFDVE 60

Query: 61  LHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESNEDMSLDL 120
           LHLETPLP +WQRCLDIQSG+IHFYNT TQ +TS+DPR         E   +N  MSLDL
Sbjct: 61  LHLETPLPLEWQRCLDIQSGQIHFYNTRTQMKTSRDPRRSTT----PEPPSTNHHMSLDL 120

Query: 121 ELNLTCESLDKNNNQTTQGGRRAI----GGMFGSSENYKQQTEMVAAVCMRCHLLVMMCK 180
           ELNL C+S   ++ + +    RA+        G   ++ Q  EMVA VCMRCH+LVM+CK
Sbjct: 121 ELNLRCDS-QPHHPEISPNSFRALFKNNSSRLGLELDHDQ--EMVATVCMRCHMLVMLCK 180

Query: 181 SSPECPNCKFINSPEQTSPAMLK 187
           SSP CPNCK++++P+Q+     K
Sbjct: 181 SSPACPNCKYMHTPDQSPSTPFK 195

[Close]

BLAST of CmaCh12G001550 vs. NCBI nr
Match: gi|694434618|ref|XP_009344523.1| (PREDICTED: uncharacterized protein LOC103936414 [Pyrus x bretschneideri])

HSP 1 Score: 167.9 bits (424), Expect = 1.7e-38
Identity = 100/226 (44.25%), Postives = 139/226 (61.50%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKRSEVRDPSENLAKKRKW------------EQPLQPPQI--NSIFDI 60
           M+ FQ+HP S N K++ + D SEN +KKRKW            E+  + PQ   NS+FDI
Sbjct: 1   MLSFQAHPLSPNQKKT-IPD-SENSSKKRKWDDEPYVNIEQLSEKRSKVPQSKPNSLFDI 60

Query: 61  ELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESNEDMSLD 120
           ELHLETPLP +WQRCLDIQSG+IHFYNT TQ +TS+DPR   +       D  +  MSLD
Sbjct: 61  ELHLETPLPLEWQRCLDIQSGQIHFYNTRTQMKTSRDPRRSPEPPTSPAADHHHHHMSLD 120

Query: 121 LELNL-TCESLDKNNNQTTQGGRRAIGGMFGSSE----------------NYKQQTEMVA 180
           LELNL +C+    N++ +T     ++  +F  S                 + +QQ EMVA
Sbjct: 121 LELNLRSCDQSRANSDIST----HSLSDLFMESHRPIQKNPNNLGFPVDCHQQQQQEMVA 180

Query: 181 AVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAM--LKRRCYLSW 194
            VC++CH+LVM+C+SSP CPNCK++++P+Q+ P +   K +C  S+
Sbjct: 181 TVCIKCHMLVMLCRSSPACPNCKYMHAPDQSPPTLFNFKPKCTSSF 220

[Close]

BLAST of CmaCh12G001550 vs. NCBI nr
Match: gi|657942393|ref|XP_008374058.1| (PREDICTED: uncharacterized protein LOC103437334 [Malus domestica])

HSP 1 Score: 166.8 bits (421), Expect = 3.8e-38
Identity = 96/214 (44.86%), Postives = 134/214 (62.62%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKRSEVRDPSENLAKKRKW------------EQPLQPPQI--NSIFDI 60
           M+ FQ+HP S N K++ + D SEN +KKRKW            E+  + PQ   NS+FDI
Sbjct: 1   MLSFQAHPLSPNQKKT-IPD-SENSSKKRKWDDLPYVNIEQLSEKRSKVPQSKPNSLFDI 60

Query: 61  ELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESNEDMSLD 120
           ELHLETPLP +WQRCLDIQSG+IHFYNT TQ +TS+DPR   +       D  +  MSLD
Sbjct: 61  ELHLETPLPLEWQRCLDIQSGQIHFYNTRTQMKTSRDPRRSPEPPTSPAADHHHHHMSLD 120

Query: 121 LELNL-TCESLDKNNNQTTQGGRRAIGGMFGSS---------------ENYKQQTEMVAA 180
           LELNL +C+    N++ +T     ++  +F  S               +++  Q EMVA 
Sbjct: 121 LELNLRSCDQSRANSDIST----HSLSDLFMESHRPTKKNPNNLGFPFDHHHHQQEMVAT 180

Query: 181 VCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAM 185
           VC++CH+LVM+C+SSP CPNCK++++P+Q+ P +
Sbjct: 181 VCLKCHMLVMLCRSSPXCPNCKYMHAPDQSPPTL 208

The following BLAST results are available for this feature:

BLAST of CmaCh12G001550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh12G001550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNT8_CUCSA	3.9e-74	73.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368900 PE=4 SV=1	[more]
E0CRK2_VITVI	5.9e-38	46.98	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g05580 PE=4 SV=...	[more]
A0A0D2QM72_GOSRA	1.4e-36	44.84	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G237500 PE=4 SV=1	[more]
A0A061FG18_THECC	7.2e-36	44.34	E3 ubiquitin-protein ligase HUWE1, putative OS=Theobroma cacao GN=TCM_034911 PE=...	[more]
A0A0D2S760_GOSRA	1.2e-35	46.77	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G237500 PE=4 SV=1	[more]

BLAST of CmaCh12G001550 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08910.1	1.3e-12	58.00	unknown protein	[more]
AT1G78170.1	1.6e-10	29.08	unknown protein	[more]
AT1G22250.1	1.4e-06	30.25	unknown protein	[more]

BLAST of CmaCh12G001550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088139\|ref\|XP_008444823.1\|	1.5e-74	72.51	PREDICTED: uncharacterized protein LOC103488058 [Cucumis melo]	[more]
gi\|449469873\|ref\|XP_004152643.1\|	5.6e-74	73.08	PREDICTED: uncharacterized protein LOC101203360 [Cucumis sativus]	[more]
gi\|470132092\|ref\|XP_004301920.1\|	2.0e-39	48.28	PREDICTED: uncharacterized protein LOC101299013 [Fragaria vesca subsp. vesca]	[more]
gi\|694434618\|ref\|XP_009344523.1\|	1.7e-38	44.25	PREDICTED: uncharacterized protein LOC103936414 [Pyrus x bretschneideri]	[more]
gi\|657942393\|ref\|XP_008374058.1\|	3.8e-38	44.86	PREDICTED: uncharacterized protein LOC103437334 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001202	WW_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G001550.1	CmaCh12G001550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	PROFILE	PS50020	WW_DOMAIN_2	coord: 52..86 score: 8
IPR001202	WW domain	unknown	SSF51045	WW domain	coord: 52..86 score: 1.1
None	No IPR available	GENE3D	G3DSA:2.20.70.10		coord: 51..86 score: 4.
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 42..188 score: 9.0
None	No IPR available	PANTHER	PTHR14791:SF28	SUBFAMILY NOT NAMED	coord: 42..188 score: 9.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh12G001550	Cucsa.160000	Cucumber (Gy14) v1	cgycmaB0448
CmaCh12G001550	Cla022092	Watermelon (97103) v1	cmawmB149
CmaCh12G001550	Csa2G368900	Cucumber (Chinese Long) v2	cmacuB168
CmaCh12G001550	MELO3C011023	Melon (DHL92) v3.5.1	cmameB165
CmaCh12G001550	ClCG08G011070	Watermelon (Charleston Gray)	cmawcgB170
CmaCh12G001550	CSPI02G20980	Wild cucumber (PI 183967)	cmacpiB169
CmaCh12G001550	CmoCh05G005210	Cucurbita moschata (Rifu)	cmacmoB192
CmaCh12G001550	CmoCh12G001200	Cucurbita moschata (Rifu)	cmacmoB176
CmaCh12G001550	Lsi08G009610	Bottle gourd (USVL1VR-Ls)	cmalsiB185
CmaCh12G001550	Cp4.1LG11g04270	Cucurbita pepo (Zucchini)	cmacpeB172
CmaCh12G001550	Cp4.1LG07g01230	Cucurbita pepo (Zucchini)	cmacpeB203
CmaCh12G001550	MELO3C011023.2	Melon (DHL92) v3.6.1	cmamedB180
CmaCh12G001550	CsaV3_2G029650	Cucumber (Chinese Long) v3	cmacucB0196
CmaCh12G001550	Cla97C08G154010	Watermelon (97103) v2	cmawmbB195
CmaCh12G001550	Bhi04G000623	Wax gourd	cmawgoB0197
CmaCh12G001550	CsGy2G020700	Cucumber (Gy14) v2	cgybcmaB172
CmaCh12G001550	Carg20541	Silver-seed gourd	carcmaB0920
CmaCh12G001550	Carg08187	Silver-seed gourd	carcmaB0075

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh12G001550	CmaCh05G004980	Cucurbita maxima (Rimu)	cmacmaB192

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh12G001550	Cucumber (Gy14) v2	cgybcmaB716
CmaCh12G001550	Cucumber (Gy14) v2	cgybcmaB722
CmaCh12G001550	Melon (DHL92) v3.6.1	cmamedB203
CmaCh12G001550	Cucumber (Chinese Long) v3	cmacucB0189
CmaCh12G001550	Cucumber (Chinese Long) v3	cmacucB0222
CmaCh12G001550	Cucumber (Chinese Long) v3	cmacucB0229
CmaCh12G001550	Watermelon (97103) v2	cmawmbB165
CmaCh12G001550	Wax gourd	cmawgoB0219
CmaCh12G001550	Cucumber (Gy14) v1	cgycmaB0225
CmaCh12G001550	Wild cucumber (PI 183967)	cmacpiB202
CmaCh12G001550	Cucumber (Chinese Long) v2	cmacuB199
CmaCh12G001550	Melon (DHL92) v3.5.1	cmameB186
CmaCh12G001550	Watermelon (Charleston Gray)	cmawcgB155
CmaCh12G001550	Watermelon (97103) v1	cmawmB167
CmaCh12G001550	Bottle gourd (USVL1VR-Ls)	cmalsiB164