CSPI02G20980 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G20980
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	BAG family molecular chaperone regulator 3
Location	Chr2 : 18501571 .. 18502655 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCTCCTATATATATATATATATAACCAACCGGCCATTCCAAACACACAGAAATTAAAAGATAAAAAAAGAGGCCATCGATCAATTTGAAGCTATGGTTCCCTTTCAATCCCACCCCTCTTCTCTAAATGACAAGATCACATCAGCAATTCAAGAGCCTGCAGATAATTTAGCAAAGAAGAGGAAGTGGGAAGAGTCGATGATCCCAACGCCACCCTTGAACTCCGTATTAGATATCGAGCTTCACCTCGAAACTCCATTACCTTTCTATTGGCAAAGGTGTCTCGACATCCAGGTCTTTTCTTTTCTCCTGATCGATACAAACCCCTATTTGTTGTATCTTTTTTCTATTTGCTAAAGTGGTTGTATAATTAAATTTACTAGGCCTATTGATCGGTGGTTGTTTATAGTATTAAAATAGGAGGTTTGAGTAGCTTTCTGGGTCAGTAAGTGATTTGATATTATTAATTAGCTTAAATCTCGATAGAGTTAAAGTGTGGTGATGATTTCTTTTTCTTCGTTTTCAGTCGGGCAAGATACACTTTTACAACATGACGACTCAAAAGAGAACATGGAAAGATCCAAGGGACAAACTCGAGAAAGATGATGACGACGACGATGAAGAAGATGACAACCGCTATGACAAGAACGACATGAGTTTGGACCTTGAACTCAACTTGACTTGTGAATCCATGGAGAAGAACAACAATCATCAAACCGTACAAGGTGTGCGTCGTGCTATAAATGACGGAATGATGTTTGGGTTATCGGAAAATTACAACCACAACAACAACAAAAAGGCGGAGATGGTGGCGGCCGTTTGCATGAGGTGCCATTTGTTAGTGATGTTGTGTAAATCTTCGCCGGAGTGTCCTAACTGTAAATTTATGAACTCGCCGCCGGAGCAGACCTCCCCGGCGATGTCCAAGCGCCGGTGTCATCTTTCTTGGTAATTAAAGTGATAATTATATATTTATATAATATAAAGTTAGGAGAAAAATGAAAAACTCTTTAATAATTAATTATAATTATTCTCTTTAATTAATTGTAACTTTAATTTGTATTATTGTAGGACGAGACCCTC

mRNA sequence

ATGGTTCCCTTTCAATCCCACCCCTCTTCTCTAAATGACAAGATCACATCAGCAATTCAAGAGCCTGCAGATAATTTAGCAAAGAAGAGGAAGTGGGAAGAGTCGATGATCCCAACGCCACCCTTGAACTCCGTATTAGATATCGAGCTTCACCTCGAAACTCCATTACCTTTCTATTGGCAAAGGTGTCTCGACATCCAGTCGGGCAAGATACACTTTTACAACATGACGACTCAAAAGAGAACATGGAAAGATCCAAGGGACAAACTCGAGAAAGATGATGACGACGACGATGAAGAAGATGACAACCGCTATGACAAGAACGACATGAGTTTGGACCTTGAACTCAACTTGACTTGTGAATCCATGGAGAAGAACAACAATCATCAAACCGTACAAGGTGTGCGTCGTGCTATAAATGACGGAATGATGTTTGGGTTATCGGAAAATTACAACCACAACAACAACAAAAAGGCGGAGATGGTGGCGGCCGTTTGCATGAGGTGCCATTTGTTAGTGATGTTGTGTAAATCTTCGCCGGAGTGTCCTAACTGTAAATTTATGAACTCGCCGCCGGAGCAGACCTCCCCGGCGATGTCCAAGCGCCGGTGTCATCTTTCTTGGTAA

Coding sequence (CDS)

ATGGTTCCCTTTCAATCCCACCCCTCTTCTCTAAATGACAAGATCACATCAGCAATTCAAGAGCCTGCAGATAATTTAGCAAAGAAGAGGAAGTGGGAAGAGTCGATGATCCCAACGCCACCCTTGAACTCCGTATTAGATATCGAGCTTCACCTCGAAACTCCATTACCTTTCTATTGGCAAAGGTGTCTCGACATCCAGTCGGGCAAGATACACTTTTACAACATGACGACTCAAAAGAGAACATGGAAAGATCCAAGGGACAAACTCGAGAAAGATGATGACGACGACGATGAAGAAGATGACAACCGCTATGACAAGAACGACATGAGTTTGGACCTTGAACTCAACTTGACTTGTGAATCCATGGAGAAGAACAACAATCATCAAACCGTACAAGGTGTGCGTCGTGCTATAAATGACGGAATGATGTTTGGGTTATCGGAAAATTACAACCACAACAACAACAAAAAGGCGGAGATGGTGGCGGCCGTTTGCATGAGGTGCCATTTGTTAGTGATGTTGTGTAAATCTTCGCCGGAGTGTCCTAACTGTAAATTTATGAACTCGCCGCCGGAGCAGACCTCCCCGGCGATGTCCAAGCGCCGGTGTCATCTTTCTTGGTAA

Homology

[Close]

BLAST of CSPI02G20980 vs. TrEMBL
Match: A0A0A0LNT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368900 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 8.1e-118
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESMIPTPPLNSVLDIELHLETPLPFYW 60
           MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESMIPTPPLNSVLDIELHLETPLPFYW
Sbjct: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESMIPTPPLNSVLDIELHLETPLPFYW 60

Query: 61  QRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDMSLDLELNLTC 120
           QRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDMSLDLELNLTC
Sbjct: 61  QRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDMSLDLELNLTC 120

Query: 121 ESMEKNNNHQTVQGVRRAINDGMMFGLSENYNHNNNKKAEMVAAVCMRCHLLVMLCKSSP 180
           ESMEKNNNHQTVQGVRRAINDGMMFGLSENYNHNNNKKAEMVAAVCMRCHLLVMLCKSSP
Sbjct: 121 ESMEKNNNHQTVQGVRRAINDGMMFGLSENYNHNNNKKAEMVAAVCMRCHLLVMLCKSSP 180

Query: 181 ECPNCKFMNSPPEQTSPAMSKRRCHLSW 209
           ECPNCKFMNSPPEQTSPAMSKRRCHLSW
Sbjct: 181 ECPNCKFMNSPPEQTSPAMSKRRCHLSW 208

[Close]

BLAST of CSPI02G20980 vs. TrEMBL
Match: A0A0D2QM72_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G237500 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.3e-34
Identity = 106/230 (46.09%), Postives = 125/230 (54.35%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESM-----------IPTPPLNSVLDIE 60
           M+ FQ+ P S +D I   I E  DN +KKRK EE                  + SV D+E
Sbjct: 1   MISFQA-PLSPSDMIGKTISE-FDNSSKKRKLEEDSQGDHEETSDKRSKAESIKSVFDME 60

Query: 61  LHLETPLPFYWQRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKND 120
           LHLETPLP  WQRCLDIQSG+IHFYN  T KRT KDPR   E                  
Sbjct: 61  LHLETPLPLEWQRCLDIQSGQIHFYNTRTHKRTSKDPRRSPEPP------------SPVH 120

Query: 121 MSLDLELNLTCESM-----EKN----NNHQTVQGVRRAIND---GMMFGLSENYN----- 180
           MSLDLELNL C+S      EK+    N H +V   R    D       GL+ N +     
Sbjct: 121 MSLDLELNLPCDSSVRKVNEKDHQLFNKHNSVGPTRAGSVDKKINSSGGLTRNLSWLAVE 180

Query: 181 HNNNKKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAMSKR 203
            N+ +  EMVA VCMRCH+LVMLCKSSP CPNCKFM+ PP+Q  P + K+
Sbjct: 181 ENDQQDQEMVATVCMRCHMLVMLCKSSPACPNCKFMH-PPDQGPPKLFKQ 215

[Close]

BLAST of CSPI02G20980 vs. TrEMBL
Match: A0A0D2S760_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G237500 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-32
Identity = 97/207 (46.86%), Postives = 113/207 (54.59%), Query Frame = 1


Query: 24  DNLAKKRKWEESM-----------IPTPPLNSVLDIELHLETPLPFYWQRCLDIQSGKIH 83
           DN +KKRK EE                  + SV D+ELHLETPLP  WQRCLDIQSG+IH
Sbjct: 10  DNSSKKRKLEEDSQGDHEETSDKRSKAESIKSVFDMELHLETPLPLEWQRCLDIQSGQIH 69

Query: 84  FYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDMSLDLELNLTCESM-----EKN- 143
           FYN  T KRT KDPR   E                  MSLDLELNL C+S      EK+ 
Sbjct: 70  FYNTRTHKRTSKDPRRSPEPP------------SPVHMSLDLELNLPCDSSVRKVNEKDH 129

Query: 144 ---NNHQTVQGVRRAIND---GMMFGLSENYN-----HNNNKKAEMVAAVCMRCHLLVML 203
              N H +V   R    D       GL+ N +      N+ +  EMVA VCMRCH+LVML
Sbjct: 130 QLFNKHNSVGPTRAGSVDKKINSSGGLTRNLSWLAVEENDQQDQEMVATVCMRCHMLVML 189

[Close]

BLAST of CSPI02G20980 vs. TrEMBL
Match: A0A061FG18_THECC (E3 ubiquitin-protein ligase HUWE1, putative OS=Theobroma cacao GN=TCM_034911 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.8e-32
Identity = 95/221 (42.99%), Postives = 119/221 (53.85%), Query Frame = 1


Query: 11  LNDKITSAIQEPADNLAKKRKWEESM---------IPTPPLNSVLDIELHLETPLPFYWQ 70
           L+  +     +  +N +KKRK +E                  SV D+ELHLETPLP  WQ
Sbjct: 8   LSPDMRKTTPDQLENSSKKRKLDEPQGDEETFEKRSKAASTKSVFDMELHLETPLPLEWQ 67

Query: 71  RCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDMSLDLELNLTCE 130
           RCLDIQSG+IHFYN  T  RT KDPR   E                  MSLDLELNL C+
Sbjct: 68  RCLDIQSGQIHFYNTRTHTRTCKDPRRSPEPP------------SPRHMSLDLELNLPCD 127

Query: 131 SMEKNN--------NHQTV----QGVRRAIND-GMMFGLSENY---NHNNNKKAEMVAAV 190
           S+ K N         H +V      V + IN  G +   S ++     ++ K+ EMVA V
Sbjct: 128 SVRKTNATDHHQFDKHNSVSPRSDSVDKKINSTGGLTTQSLSWLAVEEDDQKQQEMVATV 187

Query: 191 CMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAMSKRRCHL 207
           CMRCH+LVMLCKS+P CPNCKFM+ PP+Q  P + K+R  L
Sbjct: 188 CMRCHMLVMLCKSAPACPNCKFMH-PPDQGPPKLFKQRLSL 215

[Close]

BLAST of CSPI02G20980 vs. TrEMBL
Match: B9GUV5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s09660g PE=4 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 1.7e-30
Identity = 95/231 (41.13%), Postives = 124/231 (53.68%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWE--------ESMIPTPPLNSVLDIELHL 60
           MV FQ+ PS    K+   +    D+ +KKRKWE        E         S  +IELHL
Sbjct: 1   MVSFQALPSPNGKKLIPGL----DDSSKKRKWEDPQTEGILEKRSNPESRKSFFEIELHL 60

Query: 61  ETPLPFYWQRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDMSL 120
           ETPLP  WQRCLDIQSG+IHFYN  T KRT +DPR   E    D           +DMSL
Sbjct: 61  ETPLPLEWQRCLDIQSGQIHFYNTRTHKRTSRDPRGSPEPPSPD-----------HDMSL 120

Query: 121 DLELNLTCESMEK---NNNHQTVQGVRRAIND-GMMFGLSENYNHNN------------- 180
           +LELNL  +  ++    ++H T Q    +I   G +F  S   N ++             
Sbjct: 121 ELELNLPYDQSQRKSYTHDHITKQNPGGSIRGFGDLFKESSRDNGSSGGLTRRPSWLAFE 180

Query: 181 NKKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAMSKRRCHL 207
             + EM+A VC +CH+LVMLC+SSP CPNCKF++ P EQ+ P + K+R  L
Sbjct: 181 KDQQEMLATVCTKCHMLVMLCRSSPTCPNCKFLH-PLEQSPPKLFKQRLSL 215

[Close]

BLAST of CSPI02G20980 vs. TAIR10
Match: AT4G08910.1 (AT4G08910.1 unknown protein)

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-10
Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = 1


Query: 87  RDKLEKDDDDDDEEDDNRYDKNDMSLDLELNLTCESMEKNNNH---------QTVQGVRR 146
           R +  +D  + +   +  Y+ + MSLDLELNL+   ++ N++H         +  +  ++
Sbjct: 64  RRRFNEDSKNMNNNIEEGYNHHHMSLDLELNLSPSLIDLNHHHDLSNYNKGYEEDERKKK 123

Query: 147 AINDGMMFGLSENYNHNN------------------NKKAEMVAAVCMRCHLLVMLCKSS 197
            +  G + GL    + +                     + EMVA VCM+CH+LVMLCK+S
Sbjct: 124 MMEKGSVLGLETKKSMSRVAFDLDDDCCDRGDGVGGRSEEEMVARVCMKCHMLVMLCKAS 183

[Close]

BLAST of CSPI02G20980 vs. TAIR10
Match: AT1G22250.1 (AT1G22250.1 unknown protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-09
Identity = 37/101 (36.63%), Postives = 50/101 (49.50%), Query Frame = 1


Query: 109 DMSLDLELNLTCESMEKNNNHQTVQGVRRAINDGMMF------------GLS-------- 168
           D   DL+LNL   S   ++  +T+         G +             GLS        
Sbjct: 80  DHRTDLDLNLNLYSSSSSSVKKTIMEKDECSKGGTVIISPSKKVRSGDIGLSRSPSWLAF 139

Query: 169 ENYNHNNNKKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMN 190
           E  + +N KK EM+  VCM+CH+LVMLCKS+  CPNCKFM+
Sbjct: 140 EGDDDDNQKKQEMITTVCMKCHMLVMLCKSTLVCPNCKFMH 180

[Close]

BLAST of CSPI02G20980 vs. TAIR10
Match: AT1G78170.1 (AT1G78170.1 unknown protein)

HSP 1 Score: 58.2 bits (139), Expect = 7.3e-09
Identity = 58/181 (32.04%), Postives = 79/181 (43.65%), Query Frame = 1


Query: 47  DIELHLETPLPFYWQRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYD 106
           D ELHL TPLP  WQ            Y+ T+              D+     +D   + 
Sbjct: 56  DFELHLHTPLPSDWQT---------KGYSRTS--------------DEHRAYPKDPVIFG 115

Query: 107 KNDMSLDLELNL---------TCESMEKNNNHQ-----------TVQGVRRAINDGMMFG 166
           +  MSLDLELNL         T +  E ++ H            T    +  I  G+   
Sbjct: 116 QPKMSLDLELNLSPSGSPSRTTTKKYESSSIHNETVSSSKIKVLTNTSKKSIIGTGLSRS 175

Query: 167 LS------ENYNHNNNKKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAMS 202
            S       + N  ++K  EMV  VCM+CH+LVMLC S+P CPNCKFM+ P + +S  + 
Sbjct: 176 PSWLAFEGGDDNDVDHKGQEMVTTVCMKCHMLVMLCTSTPVCPNCKFMH-PHDHSSTKLF 212

[Close]

BLAST of CSPI02G20980 vs. NCBI nr
Match: gi|449469873|ref|XP_004152643.1| (PREDICTED: uncharacterized protein LOC101203360 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 1.2e-117
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESMIPTPPLNSVLDIELHLETPLPFYW 60
           MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESMIPTPPLNSVLDIELHLETPLPFYW
Sbjct: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESMIPTPPLNSVLDIELHLETPLPFYW 60

Query: 61  QRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDMSLDLELNLTC 120
           QRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDMSLDLELNLTC
Sbjct: 61  QRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDMSLDLELNLTC 120

Query: 121 ESMEKNNNHQTVQGVRRAINDGMMFGLSENYNHNNNKKAEMVAAVCMRCHLLVMLCKSSP 180
           ESMEKNNNHQTVQGVRRAINDGMMFGLSENYNHNNNKKAEMVAAVCMRCHLLVMLCKSSP
Sbjct: 121 ESMEKNNNHQTVQGVRRAINDGMMFGLSENYNHNNNKKAEMVAAVCMRCHLLVMLCKSSP 180

Query: 181 ECPNCKFMNSPPEQTSPAMSKRRCHLSW 209
           ECPNCKFMNSPPEQTSPAMSKRRCHLSW
Sbjct: 181 ECPNCKFMNSPPEQTSPAMSKRRCHLSW 208

[Close]

BLAST of CSPI02G20980 vs. NCBI nr
Match: gi|659088139|ref|XP_008444823.1| (PREDICTED: uncharacterized protein LOC103488058 [Cucumis melo])

HSP 1 Score: 392.5 bits (1007), Expect = 4.6e-106
Identity = 197/212 (92.92%), Postives = 206/212 (97.17%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESMIPTPP-LNSVLDIELHLETPLPFY 60
           MVPFQSHPSSLNDK TSAIQEPADNLAKKRKWEESM+PTPP LNSVLDIELHLETPLPFY
Sbjct: 1   MVPFQSHPSSLNDK-TSAIQEPADNLAKKRKWEESMVPTPPPLNSVLDIELHLETPLPFY 60

Query: 61  WQRCLDIQSGKIHFYNMTTQKRTWKDPRDKL-EKDDDDDDEE--DDNRYDKNDMSLDLEL 120
           WQRCLDIQSGKIHFYNMTTQKRTW+DPRDKL +KDDDDDDEE  DD+ YDKNDMSLDLEL
Sbjct: 61  WQRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKNDMSLDLEL 120

Query: 121 NLTCESMEKNNNHQTVQGVRRAINDGMMFGLSENYNHNNNKKAEMVAAVCMRCHLLVMLC 180
           NLTCESM+KNNN+QTVQGVRRAIN+GM+FGLSENYN+NNNKKAEMVAAVCMRCHLLVMLC
Sbjct: 121 NLTCESMDKNNNNQTVQGVRRAINNGMVFGLSENYNNNNNKKAEMVAAVCMRCHLLVMLC 180

Query: 181 KSSPECPNCKFMNSPPEQTSPAMSKRRCHLSW 209
           KSSPECPNCKFMNSPPEQTSPAMSKRRCHLSW
Sbjct: 181 KSSPECPNCKFMNSPPEQTSPAMSKRRCHLSW 211

[Close]

BLAST of CSPI02G20980 vs. NCBI nr
Match: gi|225459312|ref|XP_002284166.1| (PREDICTED: uncharacterized protein LOC100262645 [Vitis vinifera])

HSP 1 Score: 154.1 bits (388), Expect = 2.8e-34
Identity = 98/227 (43.17%), Postives = 124/227 (54.63%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEES--------MIPTPPLNSVLDIELHL 60
           MV FQ+    L+   T  I    +NL+KKRKWE++                S+ DIEL L
Sbjct: 1   MVSFQT---PLSPDPTRPIVSEFENLSKKRKWEKTGTEEVFKLQSKAKSTKSIFDIELQL 60

Query: 61  ETPLPFYWQRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDMSL 120
           ETPLP  WQRCLDIQSG+IHFYN  T KRT +DPR   E                  MSL
Sbjct: 61  ETPLPLEWQRCLDIQSGQIHFYNTRTHKRTSRDPRASPEPP------------SPGPMSL 120

Query: 121 DLELNLTCESMEKNN-------------NHQTVQGVRRAINDGMMFGLSENYNHNNNKKA 180
           +LELNL C+S+ +N              +H + + +++    G+    S ++        
Sbjct: 121 ELELNLPCDSLRRNRPDDNMGKWNSGSPSHNSKESLQKKNPGGV--ACSPSWLAFEGDNQ 180

Query: 181 EMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAMSKRRCHL 207
           EMVAAVC RCH+LVMLCKSSP CPNCKFM+ PP+QT P + KRR  L
Sbjct: 181 EMVAAVCKRCHMLVMLCKSSPTCPNCKFMH-PPDQTPPNLFKRRFSL 209

[Close]

BLAST of CSPI02G20980 vs. NCBI nr
Match: gi|823229085|ref|XP_012447283.1| (PREDICTED: uncharacterized protein LOC105770572 [Gossypium raimondii])

HSP 1 Score: 152.9 bits (385), Expect = 6.1e-34
Identity = 106/230 (46.09%), Postives = 125/230 (54.35%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESM-----------IPTPPLNSVLDIE 60
           M+ FQ+ P S +D I   I E  DN +KKRK EE                  + SV D+E
Sbjct: 1   MISFQA-PLSPSDMIGKTISE-FDNSSKKRKLEEDSQGDHEETSDKRSKAESIKSVFDME 60

Query: 61  LHLETPLPFYWQRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKND 120
           LHLETPLP  WQRCLDIQSG+IHFYN  T KRT KDPR   E                  
Sbjct: 61  LHLETPLPLEWQRCLDIQSGQIHFYNTRTHKRTSKDPRRSPEPP------------SPVH 120

Query: 121 MSLDLELNLTCESM-----EKN----NNHQTVQGVRRAIND---GMMFGLSENYN----- 180
           MSLDLELNL C+S      EK+    N H +V   R    D       GL+ N +     
Sbjct: 121 MSLDLELNLPCDSSVRKVNEKDHQLFNKHNSVGPTRAGSVDKKINSSGGLTRNLSWLAVE 180

Query: 181 HNNNKKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAMSKR 203
            N+ +  EMVA VCMRCH+LVMLCKSSP CPNCKFM+ PP+Q  P + K+
Sbjct: 181 ENDQQDQEMVATVCMRCHMLVMLCKSSPACPNCKFMH-PPDQGPPKLFKQ 215

[Close]

BLAST of CSPI02G20980 vs. NCBI nr
Match: gi|255545710|ref|XP_002513915.1| (PREDICTED: uncharacterized protein LOC8263066 [Ricinus communis])

HSP 1 Score: 147.9 bits (372), Expect = 2.0e-32
Identity = 99/229 (43.23%), Postives = 122/229 (53.28%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEE----------SMIPTPPLNSVLDIEL 60
           MV  Q+  +S N + T  I    DN +KKRKW+E          S  P      + +IEL
Sbjct: 1   MVSLQAAATSPNRRET--IISEVDNSSKKRKWDEPQTYGTFEKRSKPPNQNTKPIFEIEL 60

Query: 61  HLETPLPFYWQRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDM 120
            LETPLP  WQ+CLDIQSG+IHFYN  T+KRT +DPR   E                  M
Sbjct: 61  QLETPLPLEWQQCLDIQSGEIHFYNTRTKKRTSRDPRRSPEPP------------SPGHM 120

Query: 121 SLDLELNL-TCESMEKNN-NHQTVQGVRRAINDGMMFGLSENYNHNNNKK---------- 180
           SLDLEL+L  CES  KNN N  ++    +   D  M    E+ +     K          
Sbjct: 121 SLDLELHLQPCESQRKNNANDHSLASSIQGFGDLFMDSSKEDKSSEGTIKRCPSWIVEGD 180

Query: 181 -AEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAMSKRRCHL 207
             EMVA VC RCH+LVMLCKSSP CPNCKFM+ PP+Q+ P + K+R  L
Sbjct: 181 QEEMVATVCTRCHMLVMLCKSSPACPNCKFMH-PPDQSPPKLFKQRFSL 214

The following BLAST results are available for this feature:

BLAST of CSPI02G20980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI02G20980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNT8_CUCSA	8.1e-118	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368900 PE=4 SV=1	[more]
A0A0D2QM72_GOSRA	4.3e-34	46.09	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G237500 PE=4 SV=1	[more]
A0A0D2S760_GOSRA	2.3e-32	46.86	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G237500 PE=4 SV=1	[more]
A0A061FG18_THECC	6.8e-32	42.99	E3 ubiquitin-protein ligase HUWE1, putative OS=Theobroma cacao GN=TCM_034911 PE=...	[more]
B9GUV5_POPTR	1.7e-30	41.13	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s09660g PE=4 SV=2	[more]

BLAST of CSPI02G20980 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08910.1	1.0e-10	33.58	unknown protein	[more]
AT1G22250.1	1.9e-09	36.63	unknown protein	[more]
AT1G78170.1	7.3e-09	32.04	unknown protein	[more]

BLAST of CSPI02G20980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469873\|ref\|XP_004152643.1\|	1.2e-117	100.00	PREDICTED: uncharacterized protein LOC101203360 [Cucumis sativus]	[more]
gi\|659088139\|ref\|XP_008444823.1\|	4.6e-106	92.92	PREDICTED: uncharacterized protein LOC103488058 [Cucumis melo]	[more]
gi\|225459312\|ref\|XP_002284166.1\|	2.8e-34	43.17	PREDICTED: uncharacterized protein LOC100262645 [Vitis vinifera]	[more]
gi\|823229085\|ref\|XP_012447283.1\|	6.1e-34	46.09	PREDICTED: uncharacterized protein LOC105770572 [Gossypium raimondii]	[more]
gi\|255545710\|ref\|XP_002513915.1\|	2.0e-32	43.23	PREDICTED: uncharacterized protein LOC8263066 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001202	WW_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G20980.1	CSPI02G20980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	PROFILE	PS50020	WW_DOMAIN_2	coord: 54..88 score: 11
IPR001202	WW domain	unknown	SSF51045	WW domain	coord: 54..88 score: 2.5
None	No IPR available	GENE3D	G3DSA:2.20.70.10		coord: 53..89 score: 1.
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 48..203 score: 6.2
None	No IPR available	PANTHER	PTHR14791:SF28	SUBFAMILY NOT NAMED	coord: 48..203 score: 6.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G20980	Cla022092	Watermelon (97103) v1	cpiwmB112
CSPI02G20980	Csa2G368900	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G20980	MELO3C011023	Melon (DHL92) v3.5.1	cpimeB118
CSPI02G20980	ClCG08G011070	Watermelon (Charleston Gray)	cpiwcgB168
CSPI02G20980	Lsi08G009610	Bottle gourd (USVL1VR-Ls)	cpilsiB139
CSPI02G20980	MELO3C011023.2	Melon (DHL92) v3.6.1	cpimedB114
CSPI02G20980	CsaV3_2G029650	Cucumber (Chinese Long) v3	cpicucB081
CSPI02G20980	Cla97C08G154010	Watermelon (97103) v2	cpiwmbB162
CSPI02G20980	Bhi04G000623	Wax gourd	cpiwgoB156
CSPI02G20980	Cucsa.160000	Cucumber (Gy14) v1	cgycpiB239
CSPI02G20980	CmaCh05G004980	Cucurbita maxima (Rimu)	cmacpiB794
CSPI02G20980	CmaCh12G001550	Cucurbita maxima (Rimu)	cmacpiB169
CSPI02G20980	CmoCh12G001200	Cucurbita moschata (Rifu)	cmocpiB154
CSPI02G20980	CmoCh05G005210	Cucurbita moschata (Rifu)	cmocpiB783
CSPI02G20980	Cp4.1LG07g01230	Cucurbita pepo (Zucchini)	cpecpiB815
CSPI02G20980	Cp4.1LG11g04270	Cucurbita pepo (Zucchini)	cpecpiB093
CSPI02G20980	CsGy2G020700	Cucumber (Gy14) v2	cgybcpiB057
CSPI02G20980	Carg20541	Silver-seed gourd	carcpiB0680
CSPI02G20980	Carg08187	Silver-seed gourd	carcpiB0063

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G20980	Cucurbita maxima (Rimu)	cmacpiB660