CmaCh12G001390 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGGTCGGGTCGGGTCGGAATTCGGGCCTAGGGCTCAACTAAAACGAAATGTCCAGAAACTCAGAGAAGGAAGAAGAAGACGAAGGCTAAGAACTGGAGGCATTCCTTCACTGAGTTTGAGCTTCATCTTCTCTTCGTAATTTGTGTCAATGGCGGCTTTGGCTCTCTCTAATTACACTCTCTTCTCTCCTCGCGCTTCTACTTCCTCCAGAGCCATAGAATCCACGTCCCTTGTTACACCGTCTCTTTGTTTTCTTCATAATCCTCGCCATCGCTCTCGTCTTTCTTACCCATTATTAAGTTTCTCTCCAGCCTCCCATTCTTTTCCGGTTAGACGTTCATTCTTACCGTGTTTTTCTGCTCAAGATTCTGTTCCCAATGTACGTTGAACTCTCCTTTTATTGGTTGCTTTGATTGCTTACAGTTCTTGTTGTTATCGTTTTTCGAAATTCTGCGTACTTTTATTTCTCTGTCGTGTTGTTATTTTAGTCTTTTGCGTGTGGTGTTTTGCTGGATTTGAGTTGCGATTGTTTGAGATGGAAATGTTCGCTTATACTGCGTGTTTATTGTACGGGCTCTTTAAATGCATTTTTGGAACTTCGAATTCCTATTTTCTCAGTGCTGGATGGTGATCTTTGCTGCTATGGCCAACCCATAGTGACACTGATTAGATTACTGAATTTTGAGGTGAAAGAGTTCTTCATTTTCTAGATAGAAAAGACTGGTGGTTTTGATAAGCTGGTGGTTTAAGTCGATTTTTGTGTCAAAATTTGGCATTCCTTAAATGGAAGGTTTGGTTGCCATCCAAAAAAAACTCAAACACCTTCTGTAACGGCACTAGCCCACCACTAGCAAATAATGTTCTGTTTCGTTCTGCTCTCCAACCGATGTGTGATCTCACAATCCACCCCTCAGCGTCCTTGCTGGCACATTGTCTTGTGTCCACCCCCCTTGGAGGCTCAGCCTTCTCGCTGGCACATTGCTCGTGTCTAGCTCTGATACCATTTGTGATGATCTAGGCCCACCGCTAGCAGATATTGTCCTCTTTGGGGTTTTCCTTTCTTGCTTTCCTTCAAGGTTTTTAAACCGTGTCTGCTAGGGAAAGGTTCCCACACCCTTATAATGAATGCTTCGTTCTCCTCCAAACCGACGTGGGATCTCACTCCTACATTCCTGAATTATATTATGTCTGAACTAATAACACATATCTGCACTTTCTTTAGAGTAAGGATTCCATTTTCTTTTTTCTTGTACTTTGTAAGTGAAATAAGTGTGCAAGTATAGCTTACTCTAGTTGTTTGAAAATATTTATCTCAACTCAAGAAAGTAAGGGAGAAATGAAATAGAAAGCATCTGTGGAAGTTTTTGGAGGATTCTCATTAAGTTCTTCCCTTTATGGTATGCATACTCTTCATTTTCTTGCTAGGCTTAAAAGTTATAAGTAGCATCTCAATGGTTGAAGGGATTTAGCACACTAATCTACTTGAATCCCTTTTGCTTATATGATTTGTTATTTTACAACTTACTCAGAGATCTGTTTTAGATGTTCAATTCATTGCAGGATGATGAAGTTAGTTACTATTTTTTTTTAATTCGCTTACTCGATGTTGTTGGTTGTCCCTCCCATGAAAAAAGGTAAATACAGAAGAGGATGATGGAAAATATGAGAATAAGGCAGGAGATGAGCTTCATGGATTGAGTTTACAGGCCCTCATCAACGTATACCGTGAAGCGTTTCTTGATGGAAATCAAAAGACTATTTCTAAAGTTGAAGCGAAACTAAAAAATTTCGAAAGGGAGAAGGACGGGTTATTTCAGAAAGTGTCGGATACGTCGGCCGAGATAACATCTGGAAAAGAGAACTATATACGTTTACAAGCTGATTTTGATAATTTTAGGAAAAGATCAGAAAAAGAAAAACTTACCGTGAAGAACAATGCCCAAAAAGAGGTTATTGAGAGTCTATTACCAATGATCGACAGTTTTGAGAAAGCCAGACAACAAATTGTTCCTCAAACTGACAAGGAGAAGAAAATTGATGTAAGCTACCAGGGTATATACAAACAATTTGTGGAGGTGTTGAGGAGCTGGCGCATCTCTGCTGTTGCCGCTGTAGGAAGGCCATTTGATCCCTCAGTAAGTCAAAATCTTGTCTAAAATTTGATACCTTCATTTCAATCTACAAAAGTGTCTGTTTGATTGTTGCTTGTTCTTCATGCTTGCTAGTTTTTCTTACTGTTACTAGGAAGATTAGAACATAAAACGTATTTATTTTCTCATTCTTTATACTTGGGTGGGCGTTCTTTGCAAGTAATTCATGTCGAGTATATCGATAATTGGAATTTAATTTGTCTGATGAGTAGCAAGTGTTGAGTATTGTTGGGAGAAGAGTCTCACGTCCGCTAATTAAGGGATTAATCATGAGTTTATGAGTAAGGAATGCATCTCCATTGGTACGAGATCTTTTGGAGAAACCAAAAGCAAAACCATGAGAATTTTACTTTCAAAGTGGACAATTTCTTACCATTGTGGAGGTTTATGGTTCCTAATAATAAGAGATGACTATCTTTTTACAAATGATGGTAAAATATTTCTTTGGTTGCAGTTACATGAAGCTGTAGCTCGAGAGGAGTCGCAGGAGATCAAGGAAGGGATCATCATTCAAGAATTACGACGCGGGTTTCTTCTCGGAGAACGTCTTCTAAGACCAGCAAGAGTAAAAGTATCAAAAGGTCCAGGTAAGAAGAATTCCCCCACAACCAACTCTGAGAAACCGACCGATCAACCTGCAACTGCTACTGCTAGAGTAGACGAACACTAATTATGCAACGCCGTTTTTCAGGTTGATATAAAAGCATTGGATTTGTTGTCGTAATGCAAGCACCATGTTGTAAATGTATCTCCTAAAACTTCCCATTTCAACTAGGCTTTTGATTCATACCATTTTATGGAGGGCATTGGAAGAACTCACTCTCCATTTCACTTCTGTTTTATACACGTGATAAAGGGCACAATTGGGTTAAAGATTTCATTTATGCAAGCTTTTTGAGATGGCCAAATAGATGCAGATTTGAAGAA CGGGTCGGGTCGGGTCGGAATTCGGGCCTAGGGCTCAACTAAAACGAAATGTCCAGAAACTCAGAGAAGGAAGAAGAAGACGAAGGCTAAGAACTGGAGGCATTCCTTCACTGAGTTTGAGCTTCATCTTCTCTTCGTAATTTGTGTCAATGGCGGCTTTGGCTCTCTCTAATTACACTCTCTTCTCTCCTCGCGCTTCTACTTCCTCCAGAGCCATAGAATCCACGTCCCTTGTTACACCGTCTCTTTGTTTTCTTCATAATCCTCGCCATCGCTCTCGTCTTTCTTACCCATTATTAAGTTTCTCTCCAGCCTCCCATTCTTTTCCGGTTAGACGTTCATTCTTACCGTGTTTTTCTGCTCAAGATTCTGTTCCCAATGTAAATACAGAAGAGGATGATGGAAAATATGAGAATAAGGCAGGAGATGAGCTTCATGGATTGAGTTTACAGGCCCTCATCAACGTATACCGTGAAGCGTTTCTTGATGGAAATCAAAAGACTATTTCTAAAGTTGAAGCGAAACTAAAAAATTTCGAAAGGGAGAAGGACGGGTTATTTCAGAAAGTGTCGGATACGTCGGCCGAGATAACATCTGGAAAAGAGAACTATATACGTTTACAAGCTGATTTTGATAATTTTAGGAAAAGATCAGAAAAAGAAAAACTTACCGTGAAGAACAATGCCCAAAAAGAGGTTATTGAGAGTCTATTACCAATGATCGACAGTTTTGAGAAAGCCAGACAACAAATTGTTCCTCAAACTGACAAGGAGAAGAAAATTGATGTAAGCTACCAGGGTATATACAAACAATTTGTGGAGGTGTTGAGGAGCTGGCGCATCTCTGCTGTTGCCGCTGTAGGAAGGCCATTTGATCCCTCATTACATGAAGCTGTAGCTCGAGAGGAGTCGCAGGAGATCAAGGAAGGGATCATCATTCAAGAATTACGACGCGGGTTTCTTCTCGGAGAACGTCTTCTAAGACCAGCAAGAGTAAAAGTATCAAAAGGTCCAGGTAAGAAGAATTCCCCCACAACCAACTCTGAGAAACCGACCGATCAACCTGCAACTGCTACTGCTAGAGTAGACGAACACTAATTATGCAACGCCGTTTTTCAGGTTGATATAAAAGCATTGGATTTGTTGTCGTAATGCAAGCACCATGTTGTAAATGTATCTCCTAAAACTTCCCATTTCAACTAGGCTTTTGATTCATACCATTTTATGGAGGGCATTGGAAGAACTCACTCTCCATTTCACTTCTGTTTTATACACGTGATAAAGGGCACAATTGGGTTAAAGATTTCATTTATGCAAGCTTTTTGAGATGGCCAAATAGATGCAGATTTGAAGAA ATGGCGGCTTTGGCTCTCTCTAATTACACTCTCTTCTCTCCTCGCGCTTCTACTTCCTCCAGAGCCATAGAATCCACGTCCCTTGTTACACCGTCTCTTTGTTTTCTTCATAATCCTCGCCATCGCTCTCGTCTTTCTTACCCATTATTAAGTTTCTCTCCAGCCTCCCATTCTTTTCCGGTTAGACGTTCATTCTTACCGTGTTTTTCTGCTCAAGATTCTGTTCCCAATGTAAATACAGAAGAGGATGATGGAAAATATGAGAATAAGGCAGGAGATGAGCTTCATGGATTGAGTTTACAGGCCCTCATCAACGTATACCGTGAAGCGTTTCTTGATGGAAATCAAAAGACTATTTCTAAAGTTGAAGCGAAACTAAAAAATTTCGAAAGGGAGAAGGACGGGTTATTTCAGAAAGTGTCGGATACGTCGGCCGAGATAACATCTGGAAAAGAGAACTATATACGTTTACAAGCTGATTTTGATAATTTTAGGAAAAGATCAGAAAAAGAAAAACTTACCGTGAAGAACAATGCCCAAAAAGAGGTTATTGAGAGTCTATTACCAATGATCGACAGTTTTGAGAAAGCCAGACAACAAATTGTTCCTCAAACTGACAAGGAGAAGAAAATTGATGTAAGCTACCAGGGTATATACAAACAATTTGTGGAGGTGTTGAGGAGCTGGCGCATCTCTGCTGTTGCCGCTGTAGGAAGGCCATTTGATCCCTCATTACATGAAGCTGTAGCTCGAGAGGAGTCGCAGGAGATCAAGGAAGGGATCATCATTCAAGAATTACGACGCGGGTTTCTTCTCGGAGAACGTCTTCTAAGACCAGCAAGAGTAAAAGTATCAAAAGGTCCAGGTAAGAAGAATTCCCCCACAACCAACTCTGAGAAACCGACCGATCAACCTGCAACTGCTACTGCTAGAGTAGACGAACACTAA MAALALSNYTLFSPRASTSSRAIESTSLVTPSLCFLHNPRHRSRLSYPLLSFSPASHSFPVRRSFLPCFSAQDSVPNVNTEEDDGKYENKAGDELHGLSLQALINVYREAFLDGNQKTISKVEAKLKNFEREKDGLFQKVSDTSAEITSGKENYIRLQADFDNFRKRSEKEKLTVKNNAQKEVIESLLPMIDSFEKARQQIVPQTDKEKKIDVSYQGIYKQFVEVLRSWRISAVAAVGRPFDPSLHEAVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGKKNSPTTNSEKPTDQPATATARVDEH
BLAST of CmaCh12G001390 vs. Swiss-Prot
Match: GRPE_PROMP (Protein GrpE OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=grpE PE=3 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.1e-34 Identity = 88/237 (37.13%), Postives = 138/237 (58.23%), Query Frame = 1
BLAST of CmaCh12G001390 vs. Swiss-Prot
Match: GRPE_PROM2 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9215) GN=grpE PE=3 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.9e-34 Identity = 91/245 (37.14%), Postives = 140/245 (57.14%), Query Frame = 1
BLAST of CmaCh12G001390 vs. Swiss-Prot
Match: GRPE_PROM9 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9312) GN=grpE PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 4.1e-34 Identity = 88/222 (39.64%), Postives = 135/222 (60.81%), Query Frame = 1
BLAST of CmaCh12G001390 vs. Swiss-Prot
Match: GRPE_PROMS (Protein GrpE OS=Prochlorococcus marinus (strain AS9601) GN=grpE PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 5.4e-34 Identity = 77/178 (43.26%), Postives = 119/178 (66.85%), Query Frame = 1
BLAST of CmaCh12G001390 vs. Swiss-Prot
Match: GRPE_PROM0 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9301) GN=grpE PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.2e-33 Identity = 86/224 (38.39%), Postives = 132/224 (58.93%), Query Frame = 1
BLAST of CmaCh12G001390 vs. TrEMBL
Match: A0A0A0LQA8_CUCSA (GrpE protein homolog OS=Cucumis sativus GN=Csa_2G315400 PE=3 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 6.3e-114 Identity = 232/320 (72.50%), Postives = 258/320 (80.62%), Query Frame = 1
BLAST of CmaCh12G001390 vs. TrEMBL
Match: E0CRD7_VITVI (GrpE protein homolog OS=Vitis vinifera GN=VIT_18s0001g04190 PE=3 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 1.3e-82 Identity = 180/316 (56.96%), Postives = 227/316 (71.84%), Query Frame = 1
BLAST of CmaCh12G001390 vs. TrEMBL
Match: B9RJC6_RICCO (GrpE protein homolog OS=Ricinus communis GN=RCOM_1033170 PE=3 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 3.3e-78 Identity = 176/322 (54.66%), Postives = 228/322 (70.81%), Query Frame = 1
BLAST of CmaCh12G001390 vs. TrEMBL
Match: A0A0D2S7D1_GOSRA (GrpE protein homolog OS=Gossypium raimondii GN=B456_009G241800 PE=3 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 6.8e-76 Identity = 167/311 (53.70%), Postives = 220/311 (70.74%), Query Frame = 1
BLAST of CmaCh12G001390 vs. TrEMBL
Match: A0A0B0NCP0_GOSAR (GrpE protein homolog OS=Gossypium arboreum GN=F383_03151 PE=3 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 1.3e-74 Identity = 166/312 (53.21%), Postives = 221/312 (70.83%), Query Frame = 1
BLAST of CmaCh12G001390 vs. TAIR10
Match: AT1G36390.1 (AT1G36390.1 Co-chaperone GrpE family protein) HSP 1 Score: 215.7 bits (548), Expect = 4.1e-56 Identity = 132/287 (45.99%), Postives = 188/287 (65.51%), Query Frame = 1
BLAST of CmaCh12G001390 vs. TAIR10
Match: AT5G17710.2 (AT5G17710.2 Co-chaperone GrpE family protein) HSP 1 Score: 202.6 bits (514), Expect = 3.6e-52 Identity = 108/233 (46.35%), Postives = 157/233 (67.38%), Query Frame = 1
BLAST of CmaCh12G001390 vs. TAIR10
Match: AT4G26780.1 (AT4G26780.1 Co-chaperone GrpE family protein) HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08 Identity = 42/164 (25.61%), Postives = 75/164 (45.73%), Query Frame = 1
BLAST of CmaCh12G001390 vs. TAIR10
Match: AT5G55200.1 (AT5G55200.1 Co-chaperone GrpE family protein) HSP 1 Score: 48.9 bits (115), Expect = 6.6e-06 Identity = 46/186 (24.73%), Postives = 81/186 (43.55%), Query Frame = 1
BLAST of CmaCh12G001390 vs. NCBI nr
Match: gi|659089167|ref|XP_008445362.1| (PREDICTED: grpE protein homolog, mitochondrial [Cucumis melo]) HSP 1 Score: 424.1 bits (1089), Expect = 2.2e-115 Identity = 235/320 (73.44%), Postives = 259/320 (80.94%), Query Frame = 1
BLAST of CmaCh12G001390 vs. NCBI nr
Match: gi|449466450|ref|XP_004150939.1| (PREDICTED: grpE protein homolog, mitochondrial [Cucumis sativus]) HSP 1 Score: 418.7 bits (1075), Expect = 9.0e-114 Identity = 232/320 (72.50%), Postives = 258/320 (80.62%), Query Frame = 1
BLAST of CmaCh12G001390 vs. NCBI nr
Match: gi|225459431|ref|XP_002285824.1| (PREDICTED: grpE protein homolog, mitochondrial [Vitis vinifera]) HSP 1 Score: 314.7 bits (805), Expect = 1.8e-82 Identity = 180/316 (56.96%), Postives = 227/316 (71.84%), Query Frame = 1
BLAST of CmaCh12G001390 vs. NCBI nr
Match: gi|255545570|ref|XP_002513845.1| (PREDICTED: protein GrpE [Ricinus communis]) HSP 1 Score: 300.1 bits (767), Expect = 4.7e-78 Identity = 176/322 (54.66%), Postives = 228/322 (70.81%), Query Frame = 1
BLAST of CmaCh12G001390 vs. NCBI nr
Match: gi|823227882|ref|XP_012446714.1| (PREDICTED: grpE protein homolog, mitochondrial [Gossypium raimondii]) HSP 1 Score: 292.4 bits (747), Expect = 9.8e-76 Identity = 167/311 (53.70%), Postives = 220/311 (70.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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