CmaCh11G016880 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G016880
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cysteine-rich venom protein
Location	Cma_Chr11 : 11143161 .. 11143604 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCTAGTCCTAGTCCCCATCACCCTCGCTCAAAACTCTCACCAAGACTTCGTCAATGCCCACAACGCCGCTCGATCGAGAGTCGGGGTCGGGCCAGTCTCTTGGAACTACACCTTAGCTGCGTATGCCCAAACTTATGCCAACAAGAAGATTGGCACTTGTGAGATGCAACATTCCTATGGCCCTTACGGTGAGAATCTAGCCGAAGGGTATGGCGAGATGACTGCGGTCGAGGCAGTGAACTTTTGGGTGAGCGAGAAGAAATACTACGATCACCGGTTGAACAGATGCGTTGGAGATGAGTGTGGCCATTACACGCAGGTGGTGTGGAGGAACACCAAGCATGTGGGTTGTGCTAGAGTGAAATGCCGCAACAATTGGATTTTTGTTATATGTAACTATGATCCTCCGGGCAATTATGCTGGCCAGCTTCCTTATTGA

mRNA sequence

ATGGGGCTAGTCCTAGTCCCCATCACCCTCGCTCAAAACTCTCACCAAGACTTCGTCAATGCCCACAACGCCGCTCGATCGAGAGTCGGGGTCGGGCCAGTCTCTTGGAACTACACCTTAGCTGCGTATGCCCAAACTTATGCCAACAAGAAGATTGGCACTTGTGAGATGCAACATTCCTATGGCCCTTACGGTGAGAATCTAGCCGAAGGGTATGGCGAGATGACTGCGGTCGAGGCAGTGAACTTTTGGGTGAGCGAGAAGAAATACTACGATCACCGGTTGAACAGATGCGTTGGAGATGAGTGTGGCCATTACACGCAGGTGGTGTGGAGGAACACCAAGCATGTGGGTTGTGCTAGAGTGAAATGCCGCAACAATTGGATTTTTGTTATATGTAACTATGATCCTCCGGGCAATTATGCTGGCCAGCTTCCTTATTGA

Coding sequence (CDS)

ATGGGGCTAGTCCTAGTCCCCATCACCCTCGCTCAAAACTCTCACCAAGACTTCGTCAATGCCCACAACGCCGCTCGATCGAGAGTCGGGGTCGGGCCAGTCTCTTGGAACTACACCTTAGCTGCGTATGCCCAAACTTATGCCAACAAGAAGATTGGCACTTGTGAGATGCAACATTCCTATGGCCCTTACGGTGAGAATCTAGCCGAAGGGTATGGCGAGATGACTGCGGTCGAGGCAGTGAACTTTTGGGTGAGCGAGAAGAAATACTACGATCACCGGTTGAACAGATGCGTTGGAGATGAGTGTGGCCATTACACGCAGGTGGTGTGGAGGAACACCAAGCATGTGGGTTGTGCTAGAGTGAAATGCCGCAACAATTGGATTTTTGTTATATGTAACTATGATCCTCCGGGCAATTATGCTGGCCAGCTTCCTTATTGA

Protein sequence

MGLVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVGCARVKCRNNWIFVICNYDPPGNYAGQLPY

Homology

[Close]

BLAST of CmaCh11G016880 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.6e-52
Identity = 85/144 (59.03%), Postives = 109/144 (75.69%), Query Frame = 1


Query: 4   VLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYGP 63
           +L+  + AQNS QD++N HNAAR +VGVGP++W+  LAAYAQ YAN++IG C M HS+GP
Sbjct: 16  ILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGP 75

Query: 64  YGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVGCARVK 123
           YGENLA  + ++ A  AV  WV EK++YD+  N CVG  CGHYTQVVWRN+  +GCARV+
Sbjct: 76  YGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLGCARVR 135

Query: 124 CRNNWIFVICNYDPPGNYAGQLPY 148
             N W F+ CNYDPPGN+ GQ P+
Sbjct: 136 SNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of CmaCh11G016880 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.0e-47
Identity = 84/147 (57.14%), Postives = 109/147 (74.15%), Query Frame = 1


Query: 1   MGLVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHS 60
           +G ++VP+  AQ+S QD+VNAHN ARS++GVGP+ W+  LAAYA+ YAN+  G C + HS
Sbjct: 17  VGALVVPLK-AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHS 76

Query: 61  YGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVGCA 120
            GPYGENLA+  G+++ V AVN WV+EK  Y++  N C G  CGHYTQVVWRN+  +GCA
Sbjct: 77  RGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNG-VCGHYTQVVWRNSVRLGCA 136

Query: 121 RVKCRNNWIFVICNYDPPGNYAGQLPY 148
           +V+C N    + CNYDPPGNYA Q PY
Sbjct: 137 KVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of CmaCh11G016880 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 7.6e-47
Identity = 86/147 (58.50%), Postives = 105/147 (71.43%), Query Frame = 1


Query: 3   LVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYG 62
           LV+     AQNS QD+++AHN AR+ VGV P++W+  +AAYAQ YA++    C + HS+G
Sbjct: 22  LVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHG 81

Query: 63  PYGENLAEGYGE-MTAVEAVNFWVSEKKYYDHRLNRCV-GDECGHYTQVVWRNTKHVGCA 122
            YGENLAEG G+ MTA +AV  WV EK+YYDH  N C  G  CGHYTQVVWRN+  VGCA
Sbjct: 82  QYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCA 141

Query: 123 RVKCRNNWIFVICNYDPPGNYAGQLPY 148
           RV+C N    V CNYDPPGNY G+ PY
Sbjct: 142 RVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of CmaCh11G016880 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 6.4e-46
Identity = 84/147 (57.14%), Postives = 104/147 (70.75%), Query Frame = 1


Query: 3   LVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYG 62
           L++   + AQNS QD+++AHN AR+ VGV P++W+  +AAYAQ Y ++    C + HS+G
Sbjct: 22  LIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSHG 81

Query: 63  PYGENLAEGYGE-MTAVEAVNFWVSEKKYYDHRLNRCV-GDECGHYTQVVWRNTKHVGCA 122
            YGENLA+G G+ MTA +AV  WV EK+YYDH  N C  G  CGHYTQVVWRN+  VGCA
Sbjct: 82  QYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCA 141

Query: 123 RVKCRNNWIFVICNYDPPGNYAGQLPY 148
           RVKC N    V CNYDPPGN  GQ PY
Sbjct: 142 RVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of CmaCh11G016880 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.1e-44
Identity = 84/150 (56.00%), Postives = 107/150 (71.33%), Query Frame = 1


Query: 1   MGLVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHS 60
           + LV+V  ++AQNS QD+V+AHNAARS V VGPV+W+ ++AA+A+ YA  + G C + HS
Sbjct: 18  VALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRLVHS 77

Query: 61  YGP-YGENLAEGYG-EMTAVEAVNFWVSEKKYYDHRLNRCV-GDECGHYTQVVWRNTKHV 120
             P YGENLA G G E+T   AV+ WV+E+  Y+   N C  G  CGHYTQVVWRN+  +
Sbjct: 78  GDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNSVRI 137

Query: 121 GCARVKCRNNWIFVICNYDPPGNYAGQLPY 148
           GCARV+C N   F+ CNY PPGNYAGQ PY
Sbjct: 138 GCARVRCNNGAWFITCNYSPPGNYAGQRPY 167

[Close]

BLAST of CmaCh11G016880 vs. TrEMBL
Match: A0A0A0K4C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 9.9e-78
Identity = 133/149 (89.26%), Postives = 137/149 (91.95%), Query Frame = 1


Query: 1   MGLV--LVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQ 60
           MGL+  L  ITLAQNSHQDFVNAHNAAR++VGVGPVSWNYTLAAYAQTYANKKIGTCEMQ
Sbjct: 14  MGLITQLASITLAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTYANKKIGTCEMQ 73

Query: 61  HSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVG 120
           HSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDH  NRC+GDEC HYTQVVWR TKHVG
Sbjct: 74  HSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYTQVVWRGTKHVG 133

Query: 121 CARVKCRNNWIFVICNYDPPGNYAGQLPY 148
           CARVKC NNWIFVICNYDPP NY GQ PY
Sbjct: 134 CARVKCHNNWIFVICNYDPPDNYVGQFPY 162

[Close]

BLAST of CmaCh11G016880 vs. TrEMBL
Match: A0A0A0K6A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-61
Identity = 104/145 (71.72%), Postives = 122/145 (84.14%), Query Frame = 1


Query: 3   LVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYG 62
           L+   I+ AQNS QDFV+ HN  R+ VGVGPVSW+ TLAAYAQ+YA+ K+ TCEM+HS G
Sbjct: 17  LLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKMDTCEMEHSNG 76

Query: 63  PYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVGCARV 122
           PYGENLAEGY EMT VEAV FW +EKK+Y+H LNRCVGDECGHYTQ+VWR+T ++GC RV
Sbjct: 77  PYGENLAEGYDEMTGVEAVRFWATEKKFYNHHLNRCVGDECGHYTQIVWRHTTNIGCGRV 136

Query: 123 KCRNNWIFVICNYDPPGNYAGQLPY 148
           KC NNW+FVICNY+PPGNY GQ PY
Sbjct: 137 KCENNWVFVICNYNPPGNYIGQHPY 161

[Close]

BLAST of CmaCh11G016880 vs. TrEMBL
Match: V7BUQ0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G197500g PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 9.6e-57
Identity = 93/145 (64.14%), Postives = 118/145 (81.38%), Query Frame = 1


Query: 3   LVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYG 62
           +V V ++LAQNS QD+V  HN AR+ VGVGP+SWN+TL AYAQ YANK+I  C ++HS G
Sbjct: 13  MVTVTVSLAQNSPQDYVEVHNQARAEVGVGPISWNHTLEAYAQRYANKRIPDCNLEHSMG 72

Query: 63  PYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVGCARV 122
           PYGENLAEGYGEM   +AV FW++EK YYD++ N+CV DECGHYTQ+VWR++ ++GCAR 
Sbjct: 73  PYGENLAEGYGEMKGSDAVKFWLTEKPYYDYKSNKCVHDECGHYTQIVWRDSVNLGCARA 132

Query: 123 KCRNNWIFVICNYDPPGNYAGQLPY 148
           KC+N W+FVIC+Y PPGN  G+ PY
Sbjct: 133 KCKNGWMFVICSYSPPGNVEGERPY 157

[Close]

BLAST of CmaCh11G016880 vs. TrEMBL
Match: F6HBN9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00690 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.4e-55
Identity = 96/147 (65.31%), Postives = 113/147 (76.87%), Query Frame = 1


Query: 1   MGLVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHS 60
           MGL L     AQNS QD+V+AHNAAR++VGVG ++WN T+AAYAQ YAN++I  C + HS
Sbjct: 35  MGLALAHTCCAQNSPQDYVDAHNAARAQVGVGSITWNDTVAAYAQNYANQRISDCNLVHS 94

Query: 61  YGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVGCA 120
            GPYGENLA+G G +T  +AVN WV EK YYD+  N CVG ECGHYTQVVWRN+  +GCA
Sbjct: 95  GGPYGENLAKGSGSLTGTDAVNLWVGEKPYYDYNSNSCVGGECGHYTQVVWRNSVRLGCA 154

Query: 121 RVKCRNNWIFVICNYDPPGNYAGQLPY 148
           RV+C N W FV CNYDPPGNY GQ PY
Sbjct: 155 RVQCNNGWWFVTCNYDPPGNYVGQRPY 181

[Close]

BLAST of CmaCh11G016880 vs. TrEMBL
Match: A5BC26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042545 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.4e-55
Identity = 96/147 (65.31%), Postives = 113/147 (76.87%), Query Frame = 1


Query: 1   MGLVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHS 60
           MGL L     AQNS QD+V+AHNAAR++VGVG ++WN T+AAYAQ YAN++I  C + HS
Sbjct: 15  MGLALAHTCCAQNSPQDYVDAHNAARAQVGVGSITWNDTVAAYAQNYANQRISDCNLVHS 74

Query: 61  YGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVGCA 120
            GPYGENLA+G G +T  +AVN WV EK YYD+  N CVG ECGHYTQVVWRN+  +GCA
Sbjct: 75  GGPYGENLAKGSGSLTGTDAVNLWVGEKPYYDYNSNSCVGGECGHYTQVVWRNSVRLGCA 134

Query: 121 RVKCRNNWIFVICNYDPPGNYAGQLPY 148
           RV+C N W FV CNYDPPGNY GQ PY
Sbjct: 135 RVQCNNGWWFVTCNYDPPGNYVGQRPY 161

[Close]

BLAST of CmaCh11G016880 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-48
Identity = 84/147 (57.14%), Postives = 109/147 (74.15%), Query Frame = 1


Query: 1   MGLVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHS 60
           +G ++VP+  AQ+S QD+VNAHN ARS++GVGP+ W+  LAAYA+ YAN+  G C + HS
Sbjct: 17  VGALVVPLK-AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHS 76

Query: 61  YGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVGCA 120
            GPYGENLA+  G+++ V AVN WV+EK  Y++  N C G  CGHYTQVVWRN+  +GCA
Sbjct: 77  RGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNG-VCGHYTQVVWRNSVRLGCA 136

Query: 121 RVKCRNNWIFVICNYDPPGNYAGQLPY 148
           +V+C N    + CNYDPPGNYA Q PY
Sbjct: 137 KVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of CmaCh11G016880 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 182.2 bits (461), Expect = 2.3e-46
Identity = 80/146 (54.79%), Postives = 104/146 (71.23%), Query Frame = 1


Query: 3   LVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYG 62
           LVL+    AQ+S QDF+  HN AR+ VGVGP+ W+  +AAYA+ YAN++ G C M+HS G
Sbjct: 18  LVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSG 77

Query: 63  PYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGD-ECGHYTQVVWRNTKHVGCAR 122
            YGEN+A   G MT V AV+ WV E+  YD+  N C  D +CGHYTQVVWRN++ +GCA+
Sbjct: 78  SYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAK 137

Query: 123 VKCRNNWIFVICNYDPPGNYAGQLPY 148
           V+C N   F+ CNYDPPGN+ G+ PY
Sbjct: 138 VRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of CmaCh11G016880 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-43
Identity = 78/145 (53.79%), Postives = 100/145 (68.97%), Query Frame = 1


Query: 5   LVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYGPY 64
           LV  T AQN+ QD++N+HN AR++VGV  V W+ TLAAYA  Y+N +   C + HS GPY
Sbjct: 17  LVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPY 76

Query: 65  GENLAEG-YGEMTAVEAVNFWVSEKKYYDHRLNRCV-GDECGHYTQVVWRNTKHVGCARV 124
           GENLA+G     +A+ AV  WV EK YY +  N C  G +C HYTQVVWR++  +GCARV
Sbjct: 77  GENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGCARV 136

Query: 125 KCRNNWIFVICNYDPPGNYAGQLPY 148
           +C N W FV CNY+ PGN+ G+ PY
Sbjct: 137 QCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmaCh11G016880 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 171.8 bits (434), Expect = 3.2e-43
Identity = 76/147 (51.70%), Postives = 102/147 (69.39%), Query Frame = 1


Query: 1   MGLVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHS 60
           +G +++P + AQ+S QD++  HN AR  VGVGP+ W+  +AAYA++YA +  G C + HS
Sbjct: 17  VGALVLP-SKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHS 76

Query: 61  YGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVGCA 120
            GPYGENLA G G+++ V AVN WVSEK  Y++  N C G  CGHYTQVVWR +  +GCA
Sbjct: 77  GGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNG-VCGHYTQVVWRKSVRLGCA 136

Query: 121 RVKCRNNWIFVICNYDPPGNYAGQLPY 148
           +V+C N    + CNYDP GNY  + PY
Sbjct: 137 KVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmaCh11G016880 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 171.8 bits (434), Expect = 3.2e-43
Identity = 74/134 (55.22%), Postives = 101/134 (75.37%), Query Frame = 1


Query: 16  QDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYGPYGENLAEGYGEM 75
           Q+ +  HN AR+ VGVGP+ WN TLA YAQ+YA+++   C M+HS GP+GENLA G+G M
Sbjct: 43  QETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGTM 102

Query: 76  TAVEAVNFWVSEKKYYDHRLNRCVGD-ECGHYTQVVWRNTKHVGCARVKCRNN-WIFVIC 135
           +   A  +W++EK+ YD+  N C GD  CGHYTQ+VWR++  +GCA V+C+N+ +I+VIC
Sbjct: 103 SGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWVIC 162

Query: 136 NYDPPGNYAGQLPY 148
           +YDPPGNY GQ PY
Sbjct: 163 SYDPPGNYIGQRPY 176

[Close]

BLAST of CmaCh11G016880 vs. NCBI nr
Match: gi|659110143|ref|XP_008455071.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 301.2 bits (770), Expect = 9.8e-79
Identity = 134/148 (90.54%), Postives = 138/148 (93.24%), Query Frame = 1


Query: 1   MGLV-LVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQH 60
           MGL+ L PITLAQNSHQDFVNAHN AR++VGVGPVSWNYTLAAYAQTYANKKIGTCEMQH
Sbjct: 14  MGLITLAPITLAQNSHQDFVNAHNNARAKVGVGPVSWNYTLAAYAQTYANKKIGTCEMQH 73

Query: 61  SYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVGC 120
           SYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDH  NRC+GDEC HYTQVVWR TKHVGC
Sbjct: 74  SYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYTQVVWRGTKHVGC 133

Query: 121 ARVKCRNNWIFVICNYDPPGNYAGQLPY 148
           ARVKC NNWIFVICNYDPPGNY GQ PY
Sbjct: 134 ARVKCHNNWIFVICNYDPPGNYVGQFPY 161

[Close]

BLAST of CmaCh11G016880 vs. NCBI nr
Match: gi|449438289|ref|XP_004136921.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 1.4e-77
Identity = 133/149 (89.26%), Postives = 137/149 (91.95%), Query Frame = 1


Query: 1   MGLV--LVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQ 60
           MGL+  L  ITLAQNSHQDFVNAHNAAR++VGVGPVSWNYTLAAYAQTYANKKIGTCEMQ
Sbjct: 14  MGLITQLASITLAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTYANKKIGTCEMQ 73

Query: 61  HSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVG 120
           HSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDH  NRC+GDEC HYTQVVWR TKHVG
Sbjct: 74  HSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYTQVVWRGTKHVG 133

Query: 121 CARVKCRNNWIFVICNYDPPGNYAGQLPY 148
           CARVKC NNWIFVICNYDPP NY GQ PY
Sbjct: 134 CARVKCHNNWIFVICNYDPPDNYVGQFPY 162

[Close]

BLAST of CmaCh11G016880 vs. NCBI nr
Match: gi|659110137|ref|XP_008455068.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 245.0 bits (624), Expect = 8.3e-62
Identity = 105/145 (72.41%), Postives = 122/145 (84.14%), Query Frame = 1


Query: 3   LVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYG 62
           L+   I+ AQNS QDFV+ HN  R+ VGVGPVSW+ TLAAYAQ+YA+ KI TCEM+HS G
Sbjct: 18  LLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKIDTCEMEHSNG 77

Query: 63  PYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVGCARV 122
           PYGENLAEGY EMT VEAV FW +EKK+Y+H LNRCVGDECGHYTQ+VWR+T ++GC RV
Sbjct: 78  PYGENLAEGYDEMTGVEAVKFWATEKKFYNHHLNRCVGDECGHYTQIVWRHTTNIGCGRV 137

Query: 123 KCRNNWIFVICNYDPPGNYAGQLPY 148
           KC NNW+FVICNY+PPGNY GQ PY
Sbjct: 138 KCENNWVFVICNYNPPGNYIGQHPY 162

[Close]

BLAST of CmaCh11G016880 vs. NCBI nr
Match: gi|449438291|ref|XP_004136922.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 1.9e-61
Identity = 104/145 (71.72%), Postives = 122/145 (84.14%), Query Frame = 1


Query: 3   LVLVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYG 62
           L+   I+ AQNS QDFV+ HN  R+ VGVGPVSW+ TLAAYAQ+YA+ K+ TCEM+HS G
Sbjct: 17  LLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKMDTCEMEHSNG 76

Query: 63  PYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVGCARV 122
           PYGENLAEGY EMT VEAV FW +EKK+Y+H LNRCVGDECGHYTQ+VWR+T ++GC RV
Sbjct: 77  PYGENLAEGYDEMTGVEAVRFWATEKKFYNHHLNRCVGDECGHYTQIVWRHTTNIGCGRV 136

Query: 123 KCRNNWIFVICNYDPPGNYAGQLPY 148
           KC NNW+FVICNY+PPGNY GQ PY
Sbjct: 137 KCENNWVFVICNYNPPGNYIGQHPY 161

[Close]

BLAST of CmaCh11G016880 vs. NCBI nr
Match: gi|1009150276|ref|XP_015892934.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Ziziphus jujuba])

HSP 1 Score: 235.0 bits (598), Expect = 8.6e-59
Identity = 98/136 (72.06%), Postives = 116/136 (85.29%), Query Frame = 1


Query: 12  QNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYGPYGENLAEG 71
           +N +QDFV AHNAAR++VGVGP++WN+T+AAYAQ YAN+KI  CEM+HS GPYGENLAEG
Sbjct: 30  KNPNQDFVRAHNAARAQVGVGPITWNWTVAAYAQNYANQKINNCEMEHSGGPYGENLAEG 89

Query: 72  YGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQVVWRNTKHVGCARVKCRNNWIFV 131
           YG MT  EAV FWV+EK YY++R N CVGDEC HYTQVVWR + H+GCARVKC N W+FV
Sbjct: 90  YGSMTGEEAVKFWVTEKPYYNYRTNSCVGDECLHYTQVVWRKSVHLGCARVKCHNGWMFV 149

Query: 132 ICNYDPPGNYAGQLPY 148
           IC+YDPPGNY G+ PY
Sbjct: 150 ICSYDPPGNYEGERPY 165

The following BLAST results are available for this feature:

BLAST of CmaCh11G016880 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	4.6e-52	59.03	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PRB1_ARATH	2.0e-47	57.14	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PR1A_TOBAC	7.6e-47	58.50	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PR1B_TOBAC	6.4e-46	57.14	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]
PR1_SAMNI	2.1e-44	56.00	Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1	[more]

BLAST of CmaCh11G016880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4C1_CUCSA	9.9e-78	89.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1	[more]
A0A0A0K6A0_CUCSA	1.3e-61	71.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1	[more]
V7BUQ0_PHAVU	9.6e-57	64.14	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G197500g PE=3 SV=1	[more]
F6HBN9_VITVI	1.4e-55	65.31	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00690 PE=3 SV=...	[more]
A5BC26_VITVI	1.4e-55	65.31	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042545 PE=3 SV=1	[more]

BLAST of CmaCh11G016880 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14580.1	1.1e-48	57.14	basic pathogenesis-related protein 1	[more]
AT4G33720.1	2.3e-46	54.79	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT1G50060.1	1.4e-43	53.79	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	3.2e-43	51.70	pathogenesis-related gene 1	[more]
AT2G19990.1	3.2e-43	55.22	pathogenesis-related protein-1-like	[more]

BLAST of CmaCh11G016880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110143\|ref\|XP_008455071.1\|	9.8e-79	90.54	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|449438289\|ref\|XP_004136921.1\|	1.4e-77	89.26	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|659110137\|ref\|XP_008455068.1\|	8.3e-62	72.41	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|449438291\|ref\|XP_004136922.1\|	1.9e-61	71.72	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|1009150276\|ref\|XP_015892934.1\|	8.6e-59	72.06	PREDICTED: basic form of pathogenesis-related protein 1-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G016880.1	CmaCh11G016880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 80..93 score: 9.2E-20coord: 103..119 score: 9.2E-20coord: 34..52 score: 9.2E-20coord: 130..143 score: 9.2
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..147 score: 8.0
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 7..147 score: 2.2
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 19..135 score: 6.6
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 13..143 score: 9.1
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 5..147 score: 1.83
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 104..114 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 130..141 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..147 score: 8.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh11G016880	Cucsa.218880	Cucumber (Gy14) v1	cgycmaB0620
CmaCh11G016880	Cla001624	Watermelon (97103) v1	cmawmB127
CmaCh11G016880	Csa7G070230	Cucumber (Chinese Long) v2	cmacuB146
CmaCh11G016880	ClCG02G007340	Watermelon (Charleston Gray)	cmawcgB101
CmaCh11G016880	CSPI07G06580	Wild cucumber (PI 183967)	cmacpiB143
CmaCh11G016880	CmoCh11G014310	Cucurbita moschata (Rifu)	cmacmoB117
CmaCh11G016880	Lsi03G006210	Bottle gourd (USVL1VR-Ls)	cmalsiB116
CmaCh11G016880	Cp4.1LG04g07460	Cucurbita pepo (Zucchini)	cmacpeB154
CmaCh11G016880	MELO3C018540.2	Melon (DHL92) v3.6.1	cmamedB106
CmaCh11G016880	CsaV3_7G007550	Cucumber (Chinese Long) v3	cmacucB0171
CmaCh11G016880	Bhi05G000856	Wax gourd	cmawgoB0116
CmaCh11G016880	CsGy7G006210	Cucumber (Gy14) v2	cgybcmaB895

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh11G016880	CmaCh19G005250	Cucurbita maxima (Rimu)	cmacmaB149

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G016880	Cucurbita moschata (Rifu)	cmacmoB133
CmaCh11G016880	Cucurbita moschata (Rifu)	cmacmoB143
CmaCh11G016880	Cucurbita moschata (Rifu)	cmacmoB156
CmaCh11G016880	Melon (DHL92) v3.5.1	cmameB098
CmaCh11G016880	Melon (DHL92) v3.5.1	cmameB145
CmaCh11G016880	Watermelon (97103) v1	cmawmB118
CmaCh11G016880	Cucurbita pepo (Zucchini)	cmacpeB114
CmaCh11G016880	Cucurbita pepo (Zucchini)	cmacpeB116
CmaCh11G016880	Cucurbita pepo (Zucchini)	cmacpeB136
CmaCh11G016880	Bottle gourd (USVL1VR-Ls)	cmalsiB115
CmaCh11G016880	Melon (DHL92) v3.6.1	cmamedB156
CmaCh11G016880	Silver-seed gourd	carcmaB0405
CmaCh11G016880	Silver-seed gourd	carcmaB0525
CmaCh11G016880	Silver-seed gourd	carcmaB0630
CmaCh11G016880	Silver-seed gourd	carcmaB1025
CmaCh11G016880	Watermelon (97103) v2	cmawmbB104
CmaCh11G016880	Cucurbita maxima (Rimu)	cmacmaB135
CmaCh11G016880	Cucurbita maxima (Rimu)	cmacmaB163
CmaCh11G016880	Cucumber (Gy14) v1	cgycmaB0222