Cla001624 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001624
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Pathogenesis-related protein 1 (AHRD V1 ***- E2GEV3_9ROSI); contains Interpro domain(s) IPR001283 Allergen V5/Tpx-1 related
Location	Chr2 : 8331176 .. 8331646 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGTTTTTCAGCTCTATTTTCTTTTCTTGACCCTTGTAGTTAAATCTTCTTATGCCCAAAACTCAGCTCAAGACTACATTAATGGCCACAACTCAGCAAGATCAATAGTGGGTGTTGGAAATATTGTATGGAACACAACTCTTGCAGCCTATGCTCAAACATATGCCAACTCAAGGAAAGCTGATTGCCAATTGGTGCATTCCAATGGGCCTTATGGAGAGAACCTTGCAAAGGGAAACAATGGATTCACTGGCTCAGCAGCAGTGAAGCTATGGGTTGATGAAAAGTCTTACTATAGTCATAATAACAATGCTTGTGTTGGTGGTGAGTGTCTTCATTACACGCAAGTTGTTTGGCAAAGCTCTTATAGAGTTGGGTGTGCAAGAGTTCAATGCAACGATGGTTGGTGGTTTGTGTCTTGCAATTATGATCCTCCAGGCAATTGGGATGGGGAGTGGCCTTATTAG

mRNA sequence

ATGAGTGTTTTTCAGCTCTATTTTCTTTTCTTGACCCTTGTAGTTAAATCTTCTTATGCCCAAAACTCAGCTCAAGACTACATTAATGGCCACAACTCAGCAAGATCAATAGTGGGTGTTGGAAATATTGTATGGAACACAACTCTTGCAGCCTATGCTCAAACATATGCCAACTCAAGGAAAGCTGATTGCCAATTGGTGCATTCCAATGGGCCTTATGGAGAGAACCTTGCAAAGGGAAACAATGGATTCACTGGCTCAGCAGCAGTGAAGCTATGGGTTGATGAAAAGTCTTACTATAGTCATAATAACAATGCTTGTGTTGGTGGTGAGTGTCTTCATTACACGCAAGTTGTTTGGCAAAGCTCTTATAGAGTTGGGTGTGCAAGAGTTCAATGCAACGATGGTTGGTGGTTTGTGTCTTGCAATTATGATCCTCCAGGCAATTGGGATGGGGAGTGGCCTTATTAG

Coding sequence (CDS)

ATGAGTGTTTTTCAGCTCTATTTTCTTTTCTTGACCCTTGTAGTTAAATCTTCTTATGCCCAAAACTCAGCTCAAGACTACATTAATGGCCACAACTCAGCAAGATCAATAGTGGGTGTTGGAAATATTGTATGGAACACAACTCTTGCAGCCTATGCTCAAACATATGCCAACTCAAGGAAAGCTGATTGCCAATTGGTGCATTCCAATGGGCCTTATGGAGAGAACCTTGCAAAGGGAAACAATGGATTCACTGGCTCAGCAGCAGTGAAGCTATGGGTTGATGAAAAGTCTTACTATAGTCATAATAACAATGCTTGTGTTGGTGGTGAGTGTCTTCATTACACGCAAGTTGTTTGGCAAAGCTCTTATAGAGTTGGGTGTGCAAGAGTTCAATGCAACGATGGTTGGTGGTTTGTGTCTTGCAATTATGATCCTCCAGGCAATTGGGATGGGGAGTGGCCTTATTAG

Protein sequence

MSVFQLYFLFLTLVVKSSYAQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPYGENLAKGNNGFTGSAAVKLWVDEKSYYSHNNNACVGGECLHYTQVVWQSSYRVGCARVQCNDGWWFVSCNYDPPGNWDGEWPY

Homology

[Close]

BLAST of Cla001624 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-50
Identity = 86/149 (57.72%), Postives = 112/149 (75.17%), Query Frame = 1


Query: 8   FLFLTLVVKSSYAQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLV 67
           F+   +++ SS AQNS QDY+N HN+AR  VGVG + W+  LAAYAQ YAN R  DC ++
Sbjct: 11  FITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMI 70

Query: 68  HSNGPYGENLAKGNNGFTGSAAVKLWVDEKSYYSHNNNACVGGECLHYTQVVWQSSYRVG 127
           HS+GPYGENLA        + AVK+WVDEK +Y +N+N+CVGG C HYTQVVW++S R+G
Sbjct: 71  HSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLG 130

Query: 128 CARVQCNDGWWFVSCNYDPPGNWDGEWPY 157
           CARV+ N+GW+F++CNYDPPGN+ G+ P+
Sbjct: 131 CARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Cla001624 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-47
Identity = 91/151 (60.26%), Postives = 112/151 (74.17%), Query Frame = 1


Query: 9   LFLTLVVKSSY-AQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLV 68
           L L LV+  S  AQNS QDY++ HN+AR+ VGV  + W+  +AAYAQ YA+   ADC LV
Sbjct: 18  LLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLV 77

Query: 69  HSNGPYGENLAKGNNGF-TGSAAVKLWVDEKSYYSHNNNACVGGE-CLHYTQVVWQSSYR 128
           HS+G YGENLA+G+  F T + AV++WVDEK YY H++N C  G+ C HYTQVVW++S R
Sbjct: 78  HSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVR 137

Query: 129 VGCARVQCNDGWWFVSCNYDPPGNWDGEWPY 157
           VGCARVQCN+G + VSCNYDPPGN+ GE PY
Sbjct: 138 VGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Cla001624 vs. Swiss-Prot
Match: PR04_SOLLC (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.6e-47
Identity = 90/161 (55.90%), Postives = 110/161 (68.32%), Query Frame = 1


Query: 1   MSVFQLYFLFLTLVVKSSY----AQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTY 60
           M +F +  L   L+V + +    AQNS QDY+  HN AR+ VGVG + W+  LA+ AQ Y
Sbjct: 1   MGLFNISLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNY 60

Query: 61  ANSRKADCQLVHSNGPYGENLAKGNNGFTGSAAVKLWVDEKSYYSHNNNACVGGE-CLHY 120
           ANSR  DC L+HS    GENLAKG   FTG AAV+LWV E+  Y++  N CVGG+ C HY
Sbjct: 61  ANSRAGDCNLIHSGA--GENLAKGGGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHY 120

Query: 121 TQVVWQSSYRVGCARVQCNDGWWFVSCNYDPPGNWDGEWPY 157
           TQVVW++S R+GC R +CN+GWWF+SCNYDP GNW GE PY
Sbjct: 121 TQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWVGERPY 159

[Close]

BLAST of Cla001624 vs. Swiss-Prot
Match: PR06_SOLLC (Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum GN=PR1B1 PE=1 SV=2)

HSP 1 Score: 189.1 bits (479), Expect = 3.6e-47
Identity = 89/161 (55.28%), Postives = 110/161 (68.32%), Query Frame = 1


Query: 1   MSVFQLYFLFLTLVVKSSY----AQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTY 60
           M +F +  L   L+V + +    AQNS QDY+  HN AR+ VGVG + W+  LA+ AQ Y
Sbjct: 1   MGLFNISLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNY 60

Query: 61  ANSRKADCQLVHSNGPYGENLAKGNNGFTGSAAVKLWVDEKSYYSHNNNACVGGE-CLHY 120
           ANSR  DC L+HS    GENLAKG   FTG AAV+LWV E+  Y++  N CVGG+ C HY
Sbjct: 61  ANSRAGDCNLIHSGA--GENLAKGGGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHY 120

Query: 121 TQVVWQSSYRVGCARVQCNDGWWFVSCNYDPPGNWDGEWPY 157
           TQVVW++S R+GC R +CN+GWWF+SCNYDP GNW G+ PY
Sbjct: 121 TQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY 159

[Close]

BLAST of Cla001624 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 6.2e-47
Identity = 90/158 (56.96%), Postives = 115/158 (72.78%), Query Frame = 1


Query: 2   SVFQLYFLFLTLVVK-SSYAQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANSR 61
           S F +  L L L++  SS+AQNS QDY++ HN+AR+ VGV  + W+  +AAYAQ Y +  
Sbjct: 11  SFFLVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQL 70

Query: 62  KADCQLVHSNGPYGENLAKGNNGF-TGSAAVKLWVDEKSYYSHNNNACVGGE-CLHYTQV 121
            ADC LVHS+G YGENLA+G+  F T + AV++WVDEK YY H++N C  G+ C HYTQV
Sbjct: 71  AADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQV 130

Query: 122 VWQSSYRVGCARVQCNDGWWFVSCNYDPPGNWDGEWPY 157
           VW++S RVGCARV+CN+G + VSCNYDPPGN  G+ PY
Sbjct: 131 VWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Cla001624 vs. TrEMBL
Match: A0A0A0K2D0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070252 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 4.9e-75
Identity = 130/157 (82.80%), Postives = 144/157 (91.72%), Query Frame = 1


Query: 1   MSVFQLYFL-FLTLVVKSSYAQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANS 60
           MSVFQL+ L  + LV+K   AQNSAQDYINGHNSARS VGVGNIVWNTTLAAYAQTYANS
Sbjct: 7   MSVFQLFLLAVVVLVLKRCEAQNSAQDYINGHNSARSTVGVGNIVWNTTLAAYAQTYANS 66

Query: 61  RKADCQLVHSNGPYGENLAKGNNGFTGSAAVKLWVDEKSYYSHNNNACVGGECLHYTQVV 120
           RK+DCQL+HSNGPYGEN+AKGNNGF+G+AAVKLWVDEK YYS++ NAC GGECLHYTQVV
Sbjct: 67  RKSDCQLIHSNGPYGENIAKGNNGFSGAAAVKLWVDEKPYYSYSKNACDGGECLHYTQVV 126

Query: 121 WQSSYRVGCARVQCNDGWWFVSCNYDPPGNWDGEWPY 157
           W++SYRVGCARVQCN+GWWF+SCNYDPPGNWD E PY
Sbjct: 127 WETSYRVGCARVQCNNGWWFISCNYDPPGNWDEERPY 163

[Close]

BLAST of Cla001624 vs. TrEMBL
Match: B9HN40_POPTR (Pathogenesis-related family protein OS=Populus trichocarpa GN=POPTR_0009s08700g PE=3 SV=2)

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-57
Identity = 102/151 (67.55%), Postives = 122/151 (80.79%), Query Frame = 1


Query: 6   LYFLFLTLVVKSSYAQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQ 65
           L +L    +   S+AQNS QDY+N HN+ARS V V NI+W+ T+AAYA  YANSR +DC 
Sbjct: 10  LVYLVSLALAHPSHAQNSQQDYLNAHNAARSQVTVANIIWDNTVAAYALNYANSRISDCN 69

Query: 66  LVHSNGPYGENLAKGNNGFTGSAAVKLWVDEKSYYSHNNNACVGGECLHYTQVVWQSSYR 125
           LVHSNGPYGENLAKG+  FTG+AAV LWV EK YY + +N+CVGG+CLHYTQVVW++S R
Sbjct: 70  LVHSNGPYGENLAKGSGSFTGTAAVNLWVAEKPYYDYASNSCVGGQCLHYTQVVWRNSVR 129

Query: 126 VGCARVQCNDGWWFVSCNYDPPGNWDGEWPY 157
           VGCARV+C +GWWFVSCNYDPPGN+ GE PY
Sbjct: 130 VGCARVKCTNGWWFVSCNYDPPGNYIGERPY 160

[Close]

BLAST of Cla001624 vs. TrEMBL
Match: E2GEV3_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.0e-56
Identity = 97/137 (70.80%), Postives = 116/137 (84.67%), Query Frame = 1


Query: 20  AQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPYGENLAK 79
           AQNS QDY++ HN+AR+ VGVG+I WN T+AAYAQ YAN R +DC LVHS GPYGENLAK
Sbjct: 25  AQNSPQDYVDAHNAARAQVGVGSITWNDTVAAYAQNYANQRISDCNLVHSGGPYGENLAK 84

Query: 80  GNNGFTGSAAVKLWVDEKSYYSHNNNACVGGECLHYTQVVWQSSYRVGCARVQCNDGWWF 139
           G+   TG+ AV LWV EKSYY +N+N+CVGGEC HYTQVVW++S R+GCARVQCN+GWWF
Sbjct: 85  GSGSLTGTDAVNLWVGEKSYYDYNSNSCVGGECGHYTQVVWRNSVRLGCARVQCNNGWWF 144

Query: 140 VSCNYDPPGNWDGEWPY 157
           V+CNYDPPGN+ G+ PY
Sbjct: 145 VTCNYDPPGNYVGQRPY 161

[Close]

BLAST of Cla001624 vs. TrEMBL
Match: F6HBN8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00700 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.1e-55
Identity = 96/137 (70.07%), Postives = 114/137 (83.21%), Query Frame = 1


Query: 20  AQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPYGENLAK 79
           AQNS QDY+N HN+AR+ VGVG++ WN T+AAYAQ YAN R +DC LVHS GPYGENLAK
Sbjct: 25  AQNSPQDYVNAHNAARAQVGVGSMTWNDTVAAYAQNYANKRISDCNLVHSGGPYGENLAK 84

Query: 80  GNNGFTGSAAVKLWVDEKSYYSHNNNACVGGECLHYTQVVWQSSYRVGCARVQCNDGWWF 139
           G+   TG+ AV LWV EK  Y +N+N+CVGGECLHYTQVVW +S R+GCARVQCN+GWWF
Sbjct: 85  GSGSLTGTDAVNLWVGEKPNYDYNSNSCVGGECLHYTQVVWSNSVRLGCARVQCNNGWWF 144

Query: 140 VSCNYDPPGNWDGEWPY 157
           V+CNYDPPGN+ G+ PY
Sbjct: 145 VTCNYDPPGNYVGQRPY 161

[Close]

BLAST of Cla001624 vs. TrEMBL
Match: E2GEW7_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.1e-55
Identity = 96/137 (70.07%), Postives = 114/137 (83.21%), Query Frame = 1


Query: 20  AQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPYGENLAK 79
           AQNS QDY+N HN+AR+ VGVG++ WN T+AAYAQ YAN R +DC LVHS GPYGENLAK
Sbjct: 25  AQNSPQDYVNAHNAARAQVGVGSMTWNDTVAAYAQNYANKRISDCNLVHSGGPYGENLAK 84

Query: 80  GNNGFTGSAAVKLWVDEKSYYSHNNNACVGGECLHYTQVVWQSSYRVGCARVQCNDGWWF 139
           G+   TG+ AV LWV EK  Y +N+N+CVGGECLHYTQVVW +S R+GCARVQCN+GWWF
Sbjct: 85  GSGSLTGTDAVNLWVGEKPNYDYNSNSCVGGECLHYTQVVWSNSVRLGCARVQCNNGWWF 144

Query: 140 VSCNYDPPGNWDGEWPY 157
           V+CNYDPPGN+ G+ PY
Sbjct: 145 VTCNYDPPGNYVGQRPY 161

[Close]

BLAST of Cla001624 vs. NCBI nr
Match: gi|659110131|ref|XP_008455065.1| (PREDICTED: pathogenesis-related leaf protein 6-like [Cucumis melo])

HSP 1 Score: 291.6 bits (745), Expect = 8.2e-76
Identity = 130/156 (83.33%), Postives = 142/156 (91.03%), Query Frame = 1


Query: 2   SVFQLYFL-FLTLVVKSSYAQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANSR 61
           SVFQL+ L  + L ++   AQNSAQDYINGHNSARS V VGNIVWN TLAAYAQTYANSR
Sbjct: 8   SVFQLFLLAVVVLTLRCCEAQNSAQDYINGHNSARSTVKVGNIVWNATLAAYAQTYANSR 67

Query: 62  KADCQLVHSNGPYGENLAKGNNGFTGSAAVKLWVDEKSYYSHNNNACVGGECLHYTQVVW 121
           K DCQL+HSNGPYGENLAKGNNGF+G+AAVKLWVDEK YYS++NNAC GGECLHYTQVVW
Sbjct: 68  KGDCQLIHSNGPYGENLAKGNNGFSGAAAVKLWVDEKPYYSYSNNACNGGECLHYTQVVW 127

Query: 122 QSSYRVGCARVQCNDGWWFVSCNYDPPGNWDGEWPY 157
           ++SYRVGCARVQCNDGWWF+SCNYDPPGNWDGEWPY
Sbjct: 128 KTSYRVGCARVQCNDGWWFISCNYDPPGNWDGEWPY 163

[Close]

BLAST of Cla001624 vs. NCBI nr
Match: gi|778724764|ref|XP_004136923.2| (PREDICTED: pathogenesis-related leaf protein 6-like [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 7.0e-75
Identity = 130/157 (82.80%), Postives = 144/157 (91.72%), Query Frame = 1


Query: 1   MSVFQLYFL-FLTLVVKSSYAQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANS 60
           MSVFQL+ L  + LV+K   AQNSAQDYINGHNSARS VGVGNIVWNTTLAAYAQTYANS
Sbjct: 7   MSVFQLFLLAVVVLVLKRCEAQNSAQDYINGHNSARSTVGVGNIVWNTTLAAYAQTYANS 66

Query: 61  RKADCQLVHSNGPYGENLAKGNNGFTGSAAVKLWVDEKSYYSHNNNACVGGECLHYTQVV 120
           RK+DCQL+HSNGPYGEN+AKGNNGF+G+AAVKLWVDEK YYS++ NAC GGECLHYTQVV
Sbjct: 67  RKSDCQLIHSNGPYGENIAKGNNGFSGAAAVKLWVDEKPYYSYSKNACDGGECLHYTQVV 126

Query: 121 WQSSYRVGCARVQCNDGWWFVSCNYDPPGNWDGEWPY 157
           W++SYRVGCARVQCN+GWWF+SCNYDPPGNWD E PY
Sbjct: 127 WETSYRVGCARVQCNNGWWFISCNYDPPGNWDEERPY 163

[Close]

BLAST of Cla001624 vs. NCBI nr
Match: gi|566187033|ref|XP_002313932.2| (pathogenesis-related family protein [Populus trichocarpa])

HSP 1 Score: 230.7 bits (587), Expect = 1.7e-57
Identity = 102/151 (67.55%), Postives = 122/151 (80.79%), Query Frame = 1


Query: 6   LYFLFLTLVVKSSYAQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQ 65
           L +L    +   S+AQNS QDY+N HN+ARS V V NI+W+ T+AAYA  YANSR +DC 
Sbjct: 10  LVYLVSLALAHPSHAQNSQQDYLNAHNAARSQVTVANIIWDNTVAAYALNYANSRISDCN 69

Query: 66  LVHSNGPYGENLAKGNNGFTGSAAVKLWVDEKSYYSHNNNACVGGECLHYTQVVWQSSYR 125
           LVHSNGPYGENLAKG+  FTG+AAV LWV EK YY + +N+CVGG+CLHYTQVVW++S R
Sbjct: 70  LVHSNGPYGENLAKGSGSFTGTAAVNLWVAEKPYYDYASNSCVGGQCLHYTQVVWRNSVR 129

Query: 126 VGCARVQCNDGWWFVSCNYDPPGNWDGEWPY 157
           VGCARV+C +GWWFVSCNYDPPGN+ GE PY
Sbjct: 130 VGCARVKCTNGWWFVSCNYDPPGNYIGERPY 160

[Close]

BLAST of Cla001624 vs. NCBI nr
Match: gi|727578372|ref|XP_010461858.1| (PREDICTED: pathogenesis-related leaf protein 6-like [Camelina sativa])

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-57
Identity = 100/152 (65.79%), Postives = 123/152 (80.92%), Query Frame = 1


Query: 6   LYFLFLTLVVKSSYAQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQ 65
           L  + ++ +V ++ AQNS QDY+  HN+AR+ VGV N+VW+TT+A YA  YAN+RKA+C 
Sbjct: 9   LLIVAISFLVIATTAQNSQQDYLTAHNNARAQVGVANLVWDTTVATYALNYANTRKANCS 68

Query: 66  LVHSNGPYGENLAKGNNGFTGSAAVKLWVDEKSYYSHNNNACVGG-ECLHYTQVVWQSSY 125
           L+HSNGPYGENLAKG+  FT  AAVKLWVDEK YYS+  NAC GG +CLHYTQVVW+ S 
Sbjct: 69  LIHSNGPYGENLAKGSGNFTAIAAVKLWVDEKPYYSYTTNACTGGQQCLHYTQVVWRESV 128

Query: 126 RVGCARVQCNDGWWFVSCNYDPPGNWDGEWPY 157
           ++GCARVQC +GWWFVSCNYD PGNW GE+PY
Sbjct: 129 KIGCARVQCTNGWWFVSCNYDAPGNWIGEYPY 160

[Close]

BLAST of Cla001624 vs. NCBI nr
Match: gi|727610581|ref|XP_010478439.1| (PREDICTED: pathogenesis-related leaf protein 6-like [Camelina sativa])

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-57
Identity = 100/152 (65.79%), Postives = 123/152 (80.92%), Query Frame = 1


Query: 6   LYFLFLTLVVKSSYAQNSAQDYINGHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQ 65
           L  + ++ +V ++ AQNS QDY+  HN+AR+ VGV N+VW+TT+A YA  YAN+RKA+C 
Sbjct: 9   LLIVAISFLVIATNAQNSQQDYLTAHNNARTQVGVANLVWDTTVATYALNYANTRKANCS 68

Query: 66  LVHSNGPYGENLAKGNNGFTGSAAVKLWVDEKSYYSHNNNACVGG-ECLHYTQVVWQSSY 125
           L+HSNGPYGENLAKG+  FT  AAVKLWVDEK YYS+  NAC GG +CLHYTQVVW+ S 
Sbjct: 69  LIHSNGPYGENLAKGSGNFTAIAAVKLWVDEKPYYSYTTNACTGGQQCLHYTQVVWRESV 128

Query: 126 RVGCARVQCNDGWWFVSCNYDPPGNWDGEWPY 157
           ++GCARVQC +GWWFVSCNYD PGNW GE+PY
Sbjct: 129 KIGCARVQCTNGWWFVSCNYDAPGNWIGEYPY 160

The following BLAST results are available for this feature:

BLAST of Cla001624 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	1.2e-50	57.72	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1A_TOBAC	1.6e-47	60.26	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PR04_SOLLC	3.6e-47	55.90	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1	[more]
PR06_SOLLC	3.6e-47	55.28	Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum GN=PR1B1 PE=1 SV=2	[more]
PR1B_TOBAC	6.2e-47	56.96	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]

BLAST of Cla001624 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2D0_CUCSA	4.9e-75	82.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070252 PE=3 SV=1	[more]
B9HN40_POPTR	1.2e-57	67.55	Pathogenesis-related family protein OS=Populus trichocarpa GN=POPTR_0009s08700g ...	[more]
E2GEV3_9ROSI	3.0e-56	70.80	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]
F6HBN8_VITVI	1.1e-55	70.07	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00700 PE=3 SV=...	[more]
E2GEW7_9ROSI	1.1e-55	70.07	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]

BLAST of Cla001624 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110131\|ref\|XP_008455065.1\|	8.2e-76	83.33	PREDICTED: pathogenesis-related leaf protein 6-like [Cucumis melo]	[more]
gi\|778724764\|ref\|XP_004136923.2\|	7.0e-75	82.80	PREDICTED: pathogenesis-related leaf protein 6-like [Cucumis sativus]	[more]
gi\|566187033\|ref\|XP_002313932.2\|	1.7e-57	67.55	pathogenesis-related family protein [Populus trichocarpa]	[more]
gi\|727578372\|ref\|XP_010461858.1\|	2.3e-57	65.79	PREDICTED: pathogenesis-related leaf protein 6-like [Camelina sativa]	[more]
gi\|727610581\|ref\|XP_010478439.1\|	2.3e-57	65.79	PREDICTED: pathogenesis-related leaf protein 6-like [Camelina sativa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla001624	Cla001624.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 89..102 score: 6.4E-18coord: 139..152 score: 6.4E-18coord: 112..128 score: 6.4E-18coord: 43..61 score: 6.4
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..156 score: 4.1
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 22..156 score: 2.2
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 29..144 score: 1.6
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 22..152 score: 1.6
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 21..156 score: 2.88
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 139..150 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..156 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla001624	CSPI07G06640	Wild cucumber (PI 183967)	cpiwmB623
Cla001624	CmaCh19G005320	Cucurbita maxima (Rimu)	cmawmB503
Cla001624	CmaCh11G016880	Cucurbita maxima (Rimu)	cmawmB127
Cla001624	CmoCh19G005400	Cucurbita moschata (Rifu)	cmowmB496
Cla001624	CmoCh04G004530	Cucurbita moschata (Rifu)	cmowmB721
Cla001624	Lsi03G006180	Bottle gourd (USVL1VR-Ls)	lsiwmB268
Cla001624	Cp4.1LG15g04200	Cucurbita pepo (Zucchini)	cpewmB268
Cla001624	Cp4.1LG04g07460	Cucurbita pepo (Zucchini)	cpewmB665
Cla001624	MELO3C018034.2	Melon (DHL92) v3.6.1	medwmB522
Cla001624	CsaV3_7G007610	Cucumber (Chinese Long) v3	cucwmB635

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla001624	Melon (DHL92) v3.6.1	medwmB232
Cla001624	Watermelon (97103) v2	wmwmbB317
Cla001624	Wax gourd	wgowmB279
Cla001624	Cucumber (Gy14) v1	cgywmB427
Cla001624	Cucurbita moschata (Rifu)	cmowmB109
Cla001624	Melon (DHL92) v3.5.1	mewmB240
Cla001624	Watermelon (Charleston Gray)	wcgwmB198
Cla001624	Cucumber (Chinese Long) v2	cuwmB605