CmaCh11G003290 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G003290
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	tRNA pseudouridine synthase
Location	Cma_Chr11 : 1642672 .. 1648842 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTTTCTCTCTTACATCTGCTTGACTGCAACATCTACGTGGATTTACATTATCGTCCCTGCCGCGCCGGCGGCTGCAACTGCAAAATACTGTCGTCCGCTCAGGTTGGGTGGTGCGGTGGTTATGCTACCAAATCCAAGGGCTAGACTGCTATCACCATCAGGTGCCGGTTTCGGTTTCGGTTTCGGTTTCGGTATTAAGTGTCTGATGGAGAATCGAGCTCAGAAAAAGGACTATCTTCACTATAACCACACTGATCGCTGCAGAAATGCCCGATGGACTTCCAGGTTTTACTTTCGTACATTTTCGTTATCTATTGCTTTAATCGATTTGAAATTTCCCGTGAGGTACTTCGAATCGGATTCTGTATCTGCGAGAGGTTCGCTTTTGTGTGTAGTAATTCAATCTGAATCTGAGAAGGTTGTCAATCAAGATGTTGTATGCTTTTGGCAGGGAAAGCTACCAATTGATGTATGAAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCTCATGCTGTTAATGGAAGATTATCACTGTCCTCGCTTAGAACTGAGGTGGGTATCCAATATCAACGATTTCTATAAACTTATTTTCATTTGCAAACTTGTTGCCTCTTTCTTTATGACTCTTCCGTTTCTTAAGATGAAAGCAATGGAATTGTGAACTAGGAATCTTTTTCCCTCCCTTGCGACCGTGTGAATCTCTCTCTCTCTCTCTCTCTCTTGTGATGCTAACTCTAAGAACGAGCTTTATATATTTCATGCCGCTTACATTGTAATGTTGTATCAGCATGAGTTACTTTCGTTTATTCCAAGCAATGCAGTTCCATGAGTAGTTAAAAACAATCATGAATCCTCCTCCTGCAACCTAAAATAGTAGGGAAAAGAACGAGGATAATGTAATTGTTGTACGACTTTGTAAATCTAAGGTCTTGGATTTCTTTTTGTTCAGGTTCTCTGGTTCTTAACTTAATATCTGCTTTAGTACTAATTTTTTCTTGGATTCTCAGTTTTAGAGATGAGTTTTAATCAAATCCTTGCTATCAATTCTTACATTTGATTTGGTGATCGGCTTCATGTTTTTTTAGAAAATTTTGTTTTATAAATTCCATTGGTTGATTACAATTAGAAAAAATGAGGATGAAAATTTTGTTCTTTAATTATCTTTCTGTATAAAACAAGAAGATGTCATTTATTTATTTATAGTTTTTAGTACTTTATCCACAGACAGTTCGTGATCATGATGATACTGAGATTCAACCGGTTTGCAACACTGCAGAGTTAAACAGAGCTCCGGTTAAAGATGGGACTGGGAGGTGGGCAAGGGCAACATTTAAGATTGTTCTTTCCTACCATGGAAATTCTTTTGATGGGTGGCAAAAGCAGCCAGAGTTGAATACTGTTCAGGGGTAAGCATGTTTCAAGAAAATGTGAACCATATGCCAAGTAATATACATACGCAATTGGGAGCTTTTGAAGCTAGCAATGTTCTTTTCATTATGAAGTCTTAATAAAAAAAATCTTAAGTATTTGTAAGTTTTAGATAATGTTTGAGAAGATAGTTCTAGAGATACAATTGAGGAATCTTTTTTTGTGGAGAATCGAGTGCTAGAGATACAATTGAAAATCCAATGCCTCCAGTTCAAGTGAAACATTCCTCTTGAGTTCATTGTCCAAATTTGGTCAACCAACCTTGCTAATCTCACTTTTCCTTTTATCGTATCTCCTTCTTCTAGTATAATAGCTTAAAGTAGTATTTTAATACCTTTTGATCCATAAATAGTTTGATTGCAATCTAGAAATGGAAAGCACTCCTGTATATTATATGATTATTTCTACTTGTATCCTTTGGCAGTGTGGTGGAAAAATCTCTTGGGAAATTTGTAGATGAGAAAAAAGCTCAGCAGCTGAAAGATAGATGCTTACCGATAGAAGGATGTGCTGTGGTTGCTGGGCGCACTGACAAAGGGGTGACAGCTTTGCGACAAGTTTGCTCATTCTGTATGTTAGTTTTAATCTTTATTGACATGACTTTTTTGCTTGTTTAGATATTTAATTCCACAACTCTGTTATATTTTTCTTAGATTTTATCTCATCTAAAAAATGAAGTCTTATATTAGAATAAATTTTATCTTCTATATTATTTCTTGACATCTTTGGTAGTTGTTGAAAGTAAGTAGTATTAAAACAGGCATGGTGTATACTCTGTTTAATATAATCATAGTTCTTTTATTGATTAAGGTCTCATAAAATTTTCCTTTTTTAAATAATCGGTAGGAGGTGCTACACTGGAACTAAGCCAGGGAATAACTTTCCCATAAAAAGTAGCCAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAACGGCCATACTGTGTTATTAACTCATCTGCATACAGCTTAGAAGACTTGACCAAGATACCCATCACCGGTTATTAACTCATCTGCCATGAGACTTGGGAGTGCATTTCTTTTTACCATTTGCAGAGTTCCATATCTGATGCTATATGAAAGGAAAGTTGGTGAAGAAGATTGAAGTTTTTGTTTCAATTATTTCCAATCTGGATCTCAACAACGATAATAGAATTCAAGCTAGGCATCAAAAATACTTGAGCATCACAATACCAATAATATAATTCAAGCGGAACCATGCTTCCTTTGGATTGAGTTCTTTAACATAAATTTATACATGTGAAATTGTTTAGAAAAACACAATTAATAGATGAAGTATTTGAGTTATTTTGGTTGGAGCATAATCGCCGGATATTCGAGGACAAAGTTACTAATTTTGATTCATTTTTCAAACACCTTACTTACCTTGCTCTCTCTTAGTGTAAATTCTCCTCTCATTTCCATGATTATAGGCTTTCATCTCTCATTATCCAATGGAAATGTTTTTTTAATTCCTCTGGGCACATTTTTTGTTCTTTTGTAATTTCATCTCTTCAATGAAATGAGGGAAGCTATGTTTCTTCAATGAAATGAGGGAAGCTATGTTTCTTCAATGAAAGAGTTGTAGCAATTTCTTTCCTTCATTGGTTTCAAATTTCCATTGGAAAGGAAAACGATTCTCTTTCTGACTTCACTCACTTAATTGTTAATGTTCCATTTTAGAGATGCAATATCTGACTAAACTCCAATCACTTGTAGATACTTGGCGCACAGATGTTAAACCTCAAGACATTGAAGGTTCCATCAATAATGCAGCACCGGGAAAACTCAGAGTCTTATCCGTTTCTCAGGTAATATTAAGGATTTGTTTTATTTATTTTTTATTTTTTATGAAAATGTGTCATTGGAATGAACGTGATGCTCCAGTGTCTAGCTTTAATATTGTTGCAGAACTGAGTGGTTTAACTTATCTTTCTATTTTTCTTGTCTCGATCTTTCAGATATGTAACTTCTCATATCACTTTCTGCTGTAGGTGTCTCGTATGTTCCATCCAAACTTCTCTGCTAAATGGAGGCGATATCTGTATATTTTTCCTCTGAAAGACGGAGAGAACATGGAGCCAAATTTTGCAATTTTGGAAGATGTAGAAAACAGTAGAGAAGAGGAATATCGTGATAAAATAGAAGTTTTACATGGTGAATGCAAGGATGAGATCCTGAATAATTTGATCCTCAGTCAGGATGATGAGGAGCCTGCATCAGCTAATAAGCCTCAAACATTTAGTATAATGAGGGTTAACCAACTACTAAGGAAACTAGAAGGAAAGTTATTGTCATACAAGATGTTTGCACGTGACACCAAAGCATCTAGAAACGAGTGAGAATCATGAATTGAATAAATTATTGGTTTTTTTTCCTCTTCTTTTTCCTCTTTTTTTTTAGTTGTTCTAGCGTCAAGTTTGATTATCATTGTTCTTTTTTTTTTTTTTCCCCAAAACTTTCTGCTCATAAAGGCTATTGTCACTTTCCTTCTTATTCTGCTCATAAAGCCTATCTACATTTTCCTTCTTATTCCGTTAGTCACTCATTTGAATTCTTTTAGAAGCTATTTATAGGAATATGAAATGGATGAATCCAGTCTATATGCTCTTTTGTGGGATCTGTGGATAAAAAGGAACATGGTTTGTTCTCTCATAAAAATAAGGAAGGGAGGAGAGATGGACAATGTTAAATTTGTAAGCAGTCGAACCCAAGTTCAATTACCTACCTAATATAATTGACTCTTCCTTGAACAGTTTTTCTAGGTCCTTCGTGGTACTTCTGTTTCCCCTTTTGTACTTCTCATCCCATCAAGTTCTTTTGAGAGAGGAAAAAAAAAAAAATAATAAAAAGAAGAAGATTTGATTTTAGATATGATCAGGATGGATAGTTTGAAGATTGACTTAGCAAAGTTAAGGGCTGTTTGGAGTGTCTTTCCTAGTGCTTAAAACACTTCTTTAAGCACCTAGAAATCCTCCCAAACCGGCTCTTAGTTATATAGTTTATCAGTTGAGAATTTTTTGTTTATGTTATCATGAGATGAATGTGCGTGTAGATATGATCAGGATAGCTAGTCTGCAGATCGACTAAACAAAGTTAGTAATACAATTTGTCAATCGAGAACTTTTTGTTTGTGTCAACGTGAGATTAATATGCTTGCTTGTAGCTTTCCTTTTCCCAAATGTTTTCTTATCAATGATAGGATGAGGTTCGGATCTTTTTGACATGTACTAATGGTGACTTTCCTCCTTTTCAGAGGTCCACCTACGGAGTGTTTTGTATACCATGCCCGAGCAATGGAAGCTAGATTACCATGCTTGGTATCCACTTGTGGTCCCTTCATGCTCTCGACCTCCTTTTCTTTGATTATCTTTTTCCTTCATCCCCTTCTTGAAATCTCTTTGTGGATTTGTAACTGTAGAACATTATTCTATGCTCACTTACACTTAAAAAAGGAAGAAACTTGTTTTTTGCCTTGTGTTTTCCACTGGTTGAGAACATAGAGAACTGAAGATGAATTTGTGGGAAAGTGAGTGTCAGTCGAGGAGACATAGAATCTGTGGAAAATTATTTCAAAGCAAACGAGTCCAAGCATGAGCTCGATTCAATGCAAATTAAAATTTTATTGACAAGGGTTGCGTTCTCTTCTGTCAGTATCTTAATTTGGATAACCTTAGACAAATTCTGTTCCTTTCTGATCATACAGACTTGTATATTTATTTGTTTATCCATGTCTTAATATTCCAACAAAACCAGTGACGTGCTCTTGAATAACCCTATTCCGAATTTAGAGATCTAAGTGGTAGTGTTGTATTGACAGGACCAAGGCGTAGGAAGAAGTGTTATGTGTGTTGAGCTGGTTGCTAATCGCTTCTTGAGGAAGGTAACATCTCCAGGGTTAATTATGCTAATGGTTGTATTGTACTGAACGTAAAATTGGCCTATTTAGATCCAACCTTTTCACCAACTGCTCAAACTTAAGCGTAAGCATTGGAATTTCCCCCCAGTTATAGCAATGTTATACAACCATAAGGCTCCTTCATATTTTGATGGCACTAATTATGGTCTTCGGTTGAATACTACCAATTATAAAGGAATCTAATCATGACCTTGCAGATGGTGCGGGTGCTTGTTGCGACAGCAATTAGAGAGGCAGCTGCTGGTGCTGGAGAGGATGCGTTACTAAAGCTGATGGATGCCACATGTCGACGTGCCACTGCACCTCCTGCGCCTCCTGATGGCCTCAGTCTCGTTGATGTAGGTTATACAGAATTTGATCCACAAAATTGCTTCATATTAAATGACTAA

mRNA sequence

ATGGGCTTTCTCTCTTACATCTGCTTGACTGCAACATCTACGTGGATTTACATTATCGTCCCTGCCGCGCCGGCGGCTGCAACTGCAAAATACTGTCGTCCGCTCAGGTTGGGTGGTGCGGTGGTTATGCTACCAAATCCAAGGGCTAGACTGCTATCACCATCAGGTGCCGGTTTCGGTTTCGGTTTCGGTTTCGGTATTAAGTGTCTGATGGAGAATCGAGCTCAGAAAAAGGACTATCTTCACTATAACCACACTGATCGCTGCAGAAATGCCCGATGGACTTCCAGGGAAAGCTACCAATTGATGTATGAAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCTCATGCTGTTAATGGAAGATTATCACTGTCCTCGCTTAGAACTGAGACAGTTCGTGATCATGATGATACTGAGATTCAACCGGTTTGCAACACTGCAGAGTTAAACAGAGCTCCGGTTAAAGATGGGACTGGGAGGTGGGCAAGGGCAACATTTAAGATTGTTCTTTCCTACCATGGAAATTCTTTTGATGGGTGGCAAAAGCAGCCAGAGTTGAATACTGTTCAGGGTGTGGTGGAAAAATCTCTTGGGAAATTTGTAGATGAGAAAAAAGCTCAGCAGCTGAAAGATAGATGCTTACCGATAGAAGGATGTGCTGTGGTTGCTGGGCGCACTGACAAAGGGGTGACAGCTTTGCGACAAGTTTGCTCATTCTATACTTGGCGCACAGATGTTAAACCTCAAGACATTGAAGGTTCCATCAATAATGCAGCACCGGGAAAACTCAGAGTCTTATCCGTTTCTCAGGTGTCTCGTATGTTCCATCCAAACTTCTCTGCTAAATGGAGGCGATATCTGTATATTTTTCCTCTGAAAGACGGAGAGAACATGGAGCCAAATTTTGCAATTTTGGAAGATGTAGAAAACAGTAGAGAAGAGGAATATCGTGATAAAATAGAAGTTTTACATGGTGAATGCAAGGATGAGATCCTGAATAATTTGATCCTCAGTCAGGATGATGAGGAGCCTGCATCAGCTAATAAGCCTCAAACATTTAGTATAATGAGGGTTAACCAACTACTAAGGAAACTAGAAGGAAAGTTATTGTCATACAAGATGTTTGCACGTGACACCAAAGCATCTAGAAACGAAGGTCCACCTACGGAGTGTTTTGTATACCATGCCCGAGCAATGGAAGCTAGATTACCATGCTTGGACCAAGGCGTAGGAAGAAGTGTTATGTGTGTTGAGCTGGTTGCTAATCGCTTCTTGAGGAAGATGGTGCGGGTGCTTGTTGCGACAGCAATTAGAGAGGCAGCTGCTGGTGCTGGAGAGGATGCGTTACTAAAGCTGATGGATGCCACATGTCGACGTGCCACTGCACCTCCTGCGCCTCCTGATGGCCTCAGTCTCGTTGATGTAGGTTATACAGAATTTGATCCACAAAATTGCTTCATATTAAATGACTAA

Coding sequence (CDS)

ATGGGCTTTCTCTCTTACATCTGCTTGACTGCAACATCTACGTGGATTTACATTATCGTCCCTGCCGCGCCGGCGGCTGCAACTGCAAAATACTGTCGTCCGCTCAGGTTGGGTGGTGCGGTGGTTATGCTACCAAATCCAAGGGCTAGACTGCTATCACCATCAGGTGCCGGTTTCGGTTTCGGTTTCGGTTTCGGTATTAAGTGTCTGATGGAGAATCGAGCTCAGAAAAAGGACTATCTTCACTATAACCACACTGATCGCTGCAGAAATGCCCGATGGACTTCCAGGGAAAGCTACCAATTGATGTATGAAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCTCATGCTGTTAATGGAAGATTATCACTGTCCTCGCTTAGAACTGAGACAGTTCGTGATCATGATGATACTGAGATTCAACCGGTTTGCAACACTGCAGAGTTAAACAGAGCTCCGGTTAAAGATGGGACTGGGAGGTGGGCAAGGGCAACATTTAAGATTGTTCTTTCCTACCATGGAAATTCTTTTGATGGGTGGCAAAAGCAGCCAGAGTTGAATACTGTTCAGGGTGTGGTGGAAAAATCTCTTGGGAAATTTGTAGATGAGAAAAAAGCTCAGCAGCTGAAAGATAGATGCTTACCGATAGAAGGATGTGCTGTGGTTGCTGGGCGCACTGACAAAGGGGTGACAGCTTTGCGACAAGTTTGCTCATTCTATACTTGGCGCACAGATGTTAAACCTCAAGACATTGAAGGTTCCATCAATAATGCAGCACCGGGAAAACTCAGAGTCTTATCCGTTTCTCAGGTGTCTCGTATGTTCCATCCAAACTTCTCTGCTAAATGGAGGCGATATCTGTATATTTTTCCTCTGAAAGACGGAGAGAACATGGAGCCAAATTTTGCAATTTTGGAAGATGTAGAAAACAGTAGAGAAGAGGAATATCGTGATAAAATAGAAGTTTTACATGGTGAATGCAAGGATGAGATCCTGAATAATTTGATCCTCAGTCAGGATGATGAGGAGCCTGCATCAGCTAATAAGCCTCAAACATTTAGTATAATGAGGGTTAACCAACTACTAAGGAAACTAGAAGGAAAGTTATTGTCATACAAGATGTTTGCACGTGACACCAAAGCATCTAGAAACGAAGGTCCACCTACGGAGTGTTTTGTATACCATGCCCGAGCAATGGAAGCTAGATTACCATGCTTGGACCAAGGCGTAGGAAGAAGTGTTATGTGTGTTGAGCTGGTTGCTAATCGCTTCTTGAGGAAGATGGTGCGGGTGCTTGTTGCGACAGCAATTAGAGAGGCAGCTGCTGGTGCTGGAGAGGATGCGTTACTAAAGCTGATGGATGCCACATGTCGACGTGCCACTGCACCTCCTGCGCCTCCTGATGGCCTCAGTCTCGTTGATGTAGGTTATACAGAATTTGATCCACAAAATTGCTTCATATTAAATGACTAA

Protein sequence

MGFLSYICLTATSTWIYIIVPAAPAAATAKYCRPLRLGGAVVMLPNPRARLLSPSGAGFGFGFGFGIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSLSSLRTETVRDHDDTEIQPVCNTAELNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFAILEDVENSREEEYRDKIEVLHGECKDEILNNLILSQDDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND

Homology

[Close]

BLAST of CmaCh11G003290 vs. Swiss-Prot
Match: TRUA_LACCB (tRNA pseudouridine synthase A OS=Lactobacillus casei (strain BL23) GN=truA PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.8e-13
Identity = 44/123 (35.77%), Postives = 70/123 (56.91%), Query Frame = 1


Query: 167 FKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGR 226
           +K+ L+Y G +F G+Q QP+  TVQGV++K+L K          K + + ++G    +GR
Sbjct: 4   YKVTLAYDGTNFAGYQVQPKQRTVQGVLQKALTKMT--------KGQPVHVDG----SGR 63

Query: 227 TDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRR 286
           TD GV AL QV SF  +  ++  + +  ++N+  P  + +L    V   FH  +SAK +R
Sbjct: 64  TDSGVHALGQVISF-DYPGNIPAESMLKAMNSLMPLDIEILKAEIVDADFHARYSAKGKR 113

Query: 287 YLY 290
           YLY
Sbjct: 124 YLY 113

[Close]

BLAST of CmaCh11G003290 vs. Swiss-Prot
Match: TRUA_LACC3 (tRNA pseudouridine synthase A OS=Lactobacillus casei (strain ATCC 334) GN=truA PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.8e-13
Identity = 44/123 (35.77%), Postives = 70/123 (56.91%), Query Frame = 1


Query: 167 FKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGR 226
           +K+ L+Y G +F G+Q QP+  TVQGV++K+L K          K + + ++G    +GR
Sbjct: 4   YKVTLAYDGTNFAGYQVQPKQRTVQGVLQKALTKMT--------KGQPVHVDG----SGR 63

Query: 227 TDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRR 286
           TD GV AL QV SF  +  ++  + +  ++N+  P  + +L    V   FH  +SAK +R
Sbjct: 64  TDSGVHALGQVISF-DYPGNIPAESMLKAMNSLMPLDIEILKAEIVDADFHARYSAKGKR 113

Query: 287 YLY 290
           YLY
Sbjct: 124 YLY 113

[Close]

BLAST of CmaCh11G003290 vs. Swiss-Prot
Match: TRUA_LEPBP (tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=truA PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 6.3e-13
Identity = 44/123 (35.77%), Postives = 60/123 (48.78%), Query Frame = 1


Query: 167 FKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGR 226
           + +++ Y G  F+GWQKQ  L TVQ  +E +LG  +    A +L            VAGR
Sbjct: 4   YALLVEYDGTHFNGWQKQKNLPTVQSSIESALGIILRRNPASRLS-----------VAGR 63

Query: 227 TDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRR 286
           TD GV AL  VC+F T         +  S+N   P  + V +V +V   FH  FS   R 
Sbjct: 64  TDTGVHALGMVCNFKTEHPIPNFHKLLVSLNALTPTGVSVKNVVEVPSDFHARFSCTGRE 115

Query: 287 YLY 290
           Y+Y
Sbjct: 124 YIY 115

[Close]

BLAST of CmaCh11G003290 vs. Swiss-Prot
Match: TRUA_LEPBA (tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=truA PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 6.3e-13
Identity = 44/123 (35.77%), Postives = 60/123 (48.78%), Query Frame = 1


Query: 167 FKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGR 226
           + +++ Y G  F+GWQKQ  L TVQ  +E +LG  +    A +L            VAGR
Sbjct: 4   YALLVEYDGTHFNGWQKQKNLPTVQSSIESALGIILRRNPASRLS-----------VAGR 63

Query: 227 TDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRR 286
           TD GV AL  VC+F T         +  S+N   P  + V +V +V   FH  FS   R 
Sbjct: 64  TDTGVHALGMVCNFKTEHPIPNFHKLLVSLNALTPTGVSVKNVVEVPSDFHARFSCTGRE 115

Query: 287 YLY 290
           Y+Y
Sbjct: 124 YIY 115

[Close]

BLAST of CmaCh11G003290 vs. Swiss-Prot
Match: TRUA_METI4 (tRNA pseudouridine synthase A OS=Methylacidiphilum infernorum (isolate V4) GN=truA PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 8.2e-13
Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 1


Query: 167 FKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGR 226
           +K+ LSY G+ F GWQ+Q EL TVQ  +E+++ K  +E          +P+EG    AGR
Sbjct: 8   YKLTLSYCGSGFHGWQRQGELPTVQRALEEAVAKIWEEP---------IPVEG----AGR 67

Query: 227 TDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRR 286
           TD GV A  QV SF   R  ++P+ ++ ++N   P  +RV     V R F   F A  + 
Sbjct: 68  TDAGVHAKGQVASFAAPR-KLEPEVLKRALNYHLPDTVRVWDARIVPREFSARFDAVSKT 117

Query: 287 YLYI 291
           Y Y+
Sbjct: 128 YQYL 117

[Close]

BLAST of CmaCh11G003290 vs. TrEMBL
Match: A0A0A0LV59_CUCSA (tRNA pseudouridine synthase OS=Cucumis sativus GN=Csa_1G025830 PE=3 SV=1)

HSP 1 Score: 740.0 bits (1909), Expect = 1.9e-210
Identity = 373/451 (82.71%), Postives = 399/451 (88.47%), Query Frame = 1


Query: 43  MLPNPRARLLSPSGAGFGFGFGFGIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQL 102
           M+PNPRARL+SPS AGFG      +K LMENRAQ+KDYLHYNHTDRCR+ARWT+RESYQ 
Sbjct: 1   MIPNPRARLVSPSSAGFG------LKILMENRAQRKDYLHYNHTDRCRSARWTARESYQF 60

Query: 103 MYERPWQEVLDFYSHAVNGRLSLSSLR-TETVRDHDDTEIQPVCNTAELNRAPVKDGTGR 162
           MY RPWQEVLDFYSHAVNGR SLSSL  TE  RDHDD E   + N+AELNRA VKD TGR
Sbjct: 61  MYGRPWQEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGR 120

Query: 163 WARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCA 222
           WARATFKIVLSY GNSFDGWQKQP LNTVQG+VE+SLGKFVDEKKAQ LKD+CLP+EGCA
Sbjct: 121 WARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCA 180

Query: 223 VVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFS 282
           +VAGRTDKGVTALRQVCSFYTWRTDVKPQDIE SIN+AAPGKLR  SVSQVSR+FHPNFS
Sbjct: 181 LVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFS 240

Query: 283 AKWRRYLYIFPLKDGENMEPNFAILEDVENSREEEYRDKIEVLHGE-CKDEILNNLILSQ 342
           AKWRRYLYI PL DGENMEP+    E+VEN REEE   KIE  +GE C D I +NL+LS 
Sbjct: 241 AKWRRYLYILPLNDGENMEPDSTTWENVEN-REEENFVKIEASNGEKCVDGIHDNLVLSP 300

Query: 343 DDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAM 402
           +D+E  SA+KPQTFSI RVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARA 
Sbjct: 301 NDQELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAA 360

Query: 403 EARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRR 462
           E RLPCL+QGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALL+LMDATCRR
Sbjct: 361 ETRLPCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRR 420

Query: 463 ATAPPAPPDGLSLVDVGYTEFDPQNCFILND 492
           ATAPPAPPDGLSLVDVGYT+FD Q CFILND
Sbjct: 421 ATAPPAPPDGLSLVDVGYTDFDSQICFILND 444

[Close]

BLAST of CmaCh11G003290 vs. TrEMBL
Match: B9SDU2_RICCO (tRNA pseudouridine synthase OS=Ricinus communis GN=RCOM_1712560 PE=3 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 4.8e-161
Identity = 288/418 (68.90%), Postives = 330/418 (78.95%), Query Frame = 1


Query: 72  ENRAQKKDYLHYNHTDRCRNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSLSSL-RT 131
           E + Q K Y HYNHTD C++ RWT+RES+Q MY RPWQEV DFYS+ VNGRLS   L R+
Sbjct: 26  ETKTQNKIYFHYNHTDSCKSFRWTARESFQFMYARPWQEVSDFYSNVVNGRLSFLELFRS 85

Query: 132 ETVRDHDDTEIQPVCNTAELNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTV 191
           +     DD +IQ   N  EL     +D  GRWAR  FKI LSYHG SFDGWQKQP LNTV
Sbjct: 86  QMHFVRDDAKIQEDSNKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTV 145

Query: 192 QGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQ 251
           QG+VEKSLGKFVDEKKAQQLK+ C P+EGCAVVAGRTDKGV+ALRQVCSFYTWR DV+P 
Sbjct: 146 QGLVEKSLGKFVDEKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVRPH 205

Query: 252 DIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFAILEDVE 311
           +IE +IN++APGK+RV+SVS+VSR+FHPNFSAKWRRYLYIFP+ DGE+ E +F   ED+E
Sbjct: 206 EIEDAINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQSFD-SEDLE 265

Query: 312 NSREEEYRDKIEVLHGECKDEILNNLILSQDDEEPASANKPQTFSIMRVNQLLRKLEGKL 371
           N R  E  D+      E   E     +++ D +E   A KP+ FSI RVNQLL++LEGKL
Sbjct: 266 NLRSYEKYDEQRNGCAELTSEEHVEELITSDKDELEGAKKPRIFSICRVNQLLQQLEGKL 325

Query: 372 LSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMV 431
           LSYK+FARDTKASRN GPPTECF+YHARA EARLPC D G GR VMCVELVANRFLRKMV
Sbjct: 326 LSYKIFARDTKASRNVGPPTECFIYHARATEARLPCPDHGEGRKVMCVELVANRFLRKMV 385

Query: 432 RVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFI 489
           RVLVAT+IREAAAGA +DALLKLMDA+CRRA+APPAPPDGL L DVGYTEFD Q C +
Sbjct: 386 RVLVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLFDVGYTEFDAQICIV 442

[Close]

BLAST of CmaCh11G003290 vs. TrEMBL
Match: A0A067JV59_JATCU (tRNA pseudouridine synthase OS=Jatropha curcas GN=JCGZ_19781 PE=3 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 3.1e-160
Identity = 286/418 (68.42%), Postives = 336/418 (80.38%), Query Frame = 1


Query: 74  RAQKKDYLHYNHTDRCRNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSLSSL-RTET 133
           +AQ K Y+HYNHTD C+  RWT+RES+Q MY RPW+EV++FYS+ VNG LSLS L  T+ 
Sbjct: 38  QAQNKVYVHYNHTDSCKFLRWTARESFQFMYARPWEEVVEFYSNVVNGHLSLSELFGTQI 97

Query: 134 VRDHDDTEIQPVCNTAELNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQG 193
              HD+ +IQ     ++L     KD  GRWAR TFKIVLSYHG SFDGWQKQP LNTVQG
Sbjct: 98  HFAHDNAKIQDSFVESKLEDFSDKDKFGRWARVTFKIVLSYHGASFDGWQKQPGLNTVQG 157

Query: 194 VVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDI 253
           +VE+SLG FVDEKK+QQLKD+C P+EGCAVVAGRTDKGV+A +Q+CSFYTWR DV+P +I
Sbjct: 158 LVERSLGTFVDEKKSQQLKDKCKPLEGCAVVAGRTDKGVSAFQQICSFYTWRKDVRPHEI 217

Query: 254 EGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFAILEDVENS 313
           E +IN++APGKLRV+SVS+VSR FHPNFSAKWRRYLYIFPL DGEN        EDVEN 
Sbjct: 218 EDAINSSAPGKLRVVSVSEVSRAFHPNFSAKWRRYLYIFPLNDGENG-------EDVENF 277

Query: 314 REEEYRDKIEVLHGE--CKDEILNNLILSQDDEEPASANKPQTFSIMRVNQLLRKLEGKL 373
              +  D+     GE   K+++  + I+  D +EP    KP+TFS+ RVNQLL++LEGKL
Sbjct: 278 SSHDKYDEQRPGSGELTSKEKLDESFII--DKDEPEGTIKPRTFSVCRVNQLLQQLEGKL 337

Query: 374 LSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMV 433
           LSYK+FARDTKASRNEGPPTECF+YHARA E RLPC D G GR V+C+ELVANRFLRKMV
Sbjct: 338 LSYKIFARDTKASRNEGPPTECFIYHARATEMRLPCSDHGQGRKVICIELVANRFLRKMV 397

Query: 434 RVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFI 489
           RVLVAT+IREAAAGA +DALLKLMDA+CRRA+APPAPPDGL LVDVGYTEFDPQ+C I
Sbjct: 398 RVLVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLVDVGYTEFDPQSCII 446

[Close]

BLAST of CmaCh11G003290 vs. TrEMBL
Match: W9S3H9_9ROSA (tRNA pseudouridine synthase OS=Morus notabilis GN=L484_008208 PE=3 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 1.4e-157
Identity = 291/428 (67.99%), Postives = 330/428 (77.10%), Query Frame = 1


Query: 66  GIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSL 125
           G+   ME  +  KDY+HYNH+D CR +RWT+RESYQ MY RPWQ+VLDFYS+ VNG  S 
Sbjct: 24  GVVVEMETHSTNKDYVHYNHSDPCRFSRWTARESYQFMYGRPWQQVLDFYSNLVNGTTSF 83

Query: 126 SSL----RTETVRDHD-DTEIQPVCNTAELNRAPVKDGTGRWARATFKIVLSYHGNSFDG 185
           SSL    +   V D D D EI P  +  ++     ++ +GRWARATFK+VL YHG SFDG
Sbjct: 84  SSLFPLHKKYQVDDDDYDAEI-PEISDDKVKLKKSEERSGRWARATFKVVLGYHGASFDG 143

Query: 186 WQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSF 245
           WQKQP LNTVQG+VE+SLG+FVDEKKAQ LKD+CLP+E C VVAGRTDKGVTAL+QVCSF
Sbjct: 144 WQKQPGLNTVQGLVERSLGRFVDEKKAQLLKDKCLPLEACTVVAGRTDKGVTALQQVCSF 203

Query: 246 YTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGENME 305
           YTWR D+  QDIE +INNAA GKL+  SVS+VSR+FHPNFSAKWRRYLYIFP  D E+ E
Sbjct: 204 YTWRKDITCQDIEEAINNAALGKLKAKSVSEVSRVFHPNFSAKWRRYLYIFPFNDEEDEE 263

Query: 306 PNFAILEDVENSREEEYRDKIEVLHGECKDEILNNLILSQDDEEPASANKPQTFSIMRVN 365
                 +  +N    E  +KIE   GE  DE   NLI+  D EE  S  KP +FS+ RV+
Sbjct: 264 ------QSNKNGENLETYEKIESGCGEWNDESFGNLIID-DSEELESGKKPSSFSVSRVD 323

Query: 366 QLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVEL 425
           QLLR LEGKLLSYKMFARDTKASRNEGPPTECF+YHARA EARLP  D   GR +MCVEL
Sbjct: 324 QLLRLLEGKLLSYKMFARDTKASRNEGPPTECFIYHARAAEARLPTSDCTEGRKIMCVEL 383

Query: 426 VANRFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTE 485
           VANRFLRKMVRVLVAT+IREAAAGA EDALLKLMDATCRRATAPPAPPDGL LVDVGY+E
Sbjct: 384 VANRFLRKMVRVLVATSIREAAAGAEEDALLKLMDATCRRATAPPAPPDGLCLVDVGYSE 443

Query: 486 FDPQNCFI 489
           F P NC I
Sbjct: 444 FKPNNCLI 443

[Close]

BLAST of CmaCh11G003290 vs. TrEMBL
Match: U5FJE5_POPTR (tRNA pseudouridine synthase OS=Populus trichocarpa GN=POPTR_0018s14400g PE=3 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 2.3e-155
Identity = 287/422 (68.01%), Postives = 329/422 (77.96%), Query Frame = 1


Query: 78  KDYLHYNHTDRCRNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSLSSLRTETVRD-H 137
           K Y+ YNHTD C+ +RWT+RES+Q M+ RPWQEV+DFYS +VNG+LSL  L      D H
Sbjct: 36  KVYVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLELFGTQAHDVH 95

Query: 138 DDTEIQPVCN-TAELNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQGVVE 197
            D +I+ V N T  L      D +GRWAR TFKIVLSYHG SFDGWQKQP LNTVQG+VE
Sbjct: 96  CDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVE 155

Query: 198 KSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGS 257
           KSLG+FVDEKKAQQLK++C P+EGCA VAGRTDKGV+AL+QVCSFYTWR DVKP +IE +
Sbjct: 156 KSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDA 215

Query: 258 INNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGENME--------PNFAILE 317
           IN+ APGK+RV S+S+VSR FHPNFSAKWRRYLYIFPL DGEN E         NF+  E
Sbjct: 216 INDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIEGEGGIENFSSHE 275

Query: 318 DVENSREEEYRDKIEVLHGE-CKDEILNNLILSQDDEEPASANKPQTFSIMRVNQLLRKL 377
           + E  R E          GE   +E + N I+S D++E   A KP++FS+ RVNQLL++L
Sbjct: 276 NCEKQRNE---------CGELASEENVENSIIS-DEDELQGAKKPRSFSVCRVNQLLQQL 335

Query: 378 EGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFL 437
           EGKLLSYKMFARDTKASRN GPPTECF+YHARA E RLP  D   G  VMCVEL+ANRFL
Sbjct: 336 EGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELIANRFL 395

Query: 438 RKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNC 489
           RKMVRVLVAT++REAAAGA EDALLKLMDATCRRATAPPAPPDGL LVDVGYTEFDP+NC
Sbjct: 396 RKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNC 447

[Close]

BLAST of CmaCh11G003290 vs. TAIR10
Match: AT5G35400.2 (AT5G35400.2 Pseudouridine synthase family protein)

HSP 1 Score: 377.9 bits (969), Expect = 9.7e-105
Identity = 205/367 (55.86%), Postives = 258/367 (70.30%), Query Frame = 1


Query: 80  YLHYNHTDRCRNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSLSSL-RTETVRDHDD 139
           Y+HY+H D C  ARW +RE+++ MY+RPWQ VLDFYS+AV G LS+ SL + +    HDD
Sbjct: 6   YVHYHHADACSKARWNARETFRFMYDRPWQHVLDFYSNAVEGNLSVLSLFQPKKSLVHDD 65

Query: 140 TEIQPVCNTAELNRAPVKDG-TGRWARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKS 199
              + +   +E   +  KDG +GRW R  FKIVLSY+G SFDGWQKQP+L+TVQGVVEKS
Sbjct: 66  GITEEMLLESEPETSTRKDGRSGRWERVNFKIVLSYNGASFDGWQKQPDLHTVQGVVEKS 125

Query: 200 LGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSIN 259
           LG FVDE+KAQ LK +C P+EG  +VAGRTDKGV+AL QVCSFYTWR D++P  IE +IN
Sbjct: 126 LGGFVDERKAQLLKKKCKPLEGRVLVAGRTDKGVSALNQVCSFYTWRKDIEPIAIEDAIN 185

Query: 260 NAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFAILEDVENSREEEY 319
             A GKLRV+S+S+VSR FHPNFSAKWRRYLYIFPL D E +  +    E+ EN   +E 
Sbjct: 186 KDASGKLRVVSISKVSRSFHPNFSAKWRRYLYIFPLDDAEPLRKSG---ENHENFIFDEN 245

Query: 320 RDKIEVLHGECKDEILNNLILSQDD----EEPASA----NKPQTFSIMRVNQLLRKLEGK 379
           + K    +G   +EI   +I+S+DD    EE ++A     KP  FS+ +V+QLL+ L+GK
Sbjct: 246 KKKQR--NGLLSEEIAEEVIMSEDDELEIEETSNALEVVEKPSDFSVSKVDQLLQHLQGK 305

Query: 380 LLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKM 437
           +LSYKMFARDTKA+RNEGPPTECF+YHARA E RL         S   V  VA  F   +
Sbjct: 306 VLSYKMFARDTKAARNEGPPTECFMYHARAAEIRL---------SSSVVHFVAWVFGGSI 358

[Close]

BLAST of CmaCh11G003290 vs. TAIR10
Match: AT1G20370.1 (AT1G20370.1 Pseudouridine synthase family protein)

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-08
Identity = 46/148 (31.08%), Postives = 68/148 (45.95%), Query Frame = 1


Query: 146 NTAELNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEK 205
           N AE  RAP      ++ R    IV ++ G  + G QK P   T++G +E++L       
Sbjct: 46  NVAE-RRAP------KYRRRKVAIVFAFCGVGYQGMQKNPGAKTIEGELEEAL----FHA 105

Query: 206 KAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLR 265
            A    DR  P       + RTDKGV+A+ QV S    R  V P      +N+  P ++R
Sbjct: 106 GAVPDADRNKPRNYEWARSARTDKGVSAVGQVVS---GRFYVDPPGFVERLNSKLPDQIR 165

Query: 266 VLSVSQVSRMFHPNFSAKWRRYLYIFPL 294
           V    +V+  F        RRY+Y+ P+
Sbjct: 166 VFGYKRVAPSFSSKKFCDRRRYVYLIPV 179

[Close]

BLAST of CmaCh11G003290 vs. NCBI nr
Match: gi|659107096|ref|XP_008453520.1| (PREDICTED: uncharacterized protein LOC103494203 [Cucumis melo])

HSP 1 Score: 751.9 bits (1940), Expect = 7.0e-214
Identity = 380/451 (84.26%), Postives = 403/451 (89.36%), Query Frame = 1


Query: 43  MLPNPRARLLSPSGAGFGFGFGFGIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQL 102
           M+PNPRARL+SPS AGFG      +K LMENRAQ+KDYLHYNHTDRCRNARWT+RES+Q 
Sbjct: 1   MIPNPRARLVSPSSAGFG------LKILMENRAQQKDYLHYNHTDRCRNARWTARESFQF 60

Query: 103 MYERPWQEVLDFYSHAVNGRLSLSSLR-TETVRDHDDTEIQPVCNTAELNRAPVKDGTGR 162
           MY RPWQEVLDFYSHAVNGRLSLSSL  TE  RDHDD E   + N+AELNRA VKD TGR
Sbjct: 61  MYGRPWQEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGR 120

Query: 163 WARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCA 222
           WARA FKIVLSYHGNSFDGWQKQP LNTVQG+VE+SLGKFVDEKKAQ LKD+CLP+EGCA
Sbjct: 121 WARANFKIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCA 180

Query: 223 VVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFS 282
           VVAGRTDKGVTALRQVCSFYTWRTDVKPQDIE SIN+AAPGKLR LSVSQVSR+FHPNFS
Sbjct: 181 VVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFS 240

Query: 283 AKWRRYLYIFPLKDGENMEPNFAILEDVENSREEEYRDKIEVLHGE-CKDEILNNLILSQ 342
           AKWRRYLYI PL DGENMEP+ AI EDVEN REEE   KIE L+GE C D I +NL+LS 
Sbjct: 241 AKWRRYLYILPLNDGENMEPDSAIWEDVEN-REEENCVKIEALNGEKCVDGIHDNLVLSP 300

Query: 343 DDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAM 402
           +D+E  SA+KPQTFSI RVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARA 
Sbjct: 301 NDDELVSADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAA 360

Query: 403 EARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRR 462
           E RLPCL+QGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALL+LM ATCRR
Sbjct: 361 ETRLPCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRR 420

Query: 463 ATAPPAPPDGLSLVDVGYTEFDPQNCFILND 492
           ATAPPAPPDGLSLVDVGYTEFD Q CFILND
Sbjct: 421 ATAPPAPPDGLSLVDVGYTEFDSQICFILND 444

[Close]

BLAST of CmaCh11G003290 vs. NCBI nr
Match: gi|449439176|ref|XP_004137363.1| (PREDICTED: uncharacterized protein LOC101205562 [Cucumis sativus])

HSP 1 Score: 740.0 bits (1909), Expect = 2.8e-210
Identity = 373/451 (82.71%), Postives = 399/451 (88.47%), Query Frame = 1


Query: 43  MLPNPRARLLSPSGAGFGFGFGFGIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQL 102
           M+PNPRARL+SPS AGFG      +K LMENRAQ+KDYLHYNHTDRCR+ARWT+RESYQ 
Sbjct: 1   MIPNPRARLVSPSSAGFG------LKILMENRAQRKDYLHYNHTDRCRSARWTARESYQF 60

Query: 103 MYERPWQEVLDFYSHAVNGRLSLSSLR-TETVRDHDDTEIQPVCNTAELNRAPVKDGTGR 162
           MY RPWQEVLDFYSHAVNGR SLSSL  TE  RDHDD E   + N+AELNRA VKD TGR
Sbjct: 61  MYGRPWQEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGR 120

Query: 163 WARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCA 222
           WARATFKIVLSY GNSFDGWQKQP LNTVQG+VE+SLGKFVDEKKAQ LKD+CLP+EGCA
Sbjct: 121 WARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCA 180

Query: 223 VVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFS 282
           +VAGRTDKGVTALRQVCSFYTWRTDVKPQDIE SIN+AAPGKLR  SVSQVSR+FHPNFS
Sbjct: 181 LVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFS 240

Query: 283 AKWRRYLYIFPLKDGENMEPNFAILEDVENSREEEYRDKIEVLHGE-CKDEILNNLILSQ 342
           AKWRRYLYI PL DGENMEP+    E+VEN REEE   KIE  +GE C D I +NL+LS 
Sbjct: 241 AKWRRYLYILPLNDGENMEPDSTTWENVEN-REEENFVKIEASNGEKCVDGIHDNLVLSP 300

Query: 343 DDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAM 402
           +D+E  SA+KPQTFSI RVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARA 
Sbjct: 301 NDQELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAA 360

Query: 403 EARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRR 462
           E RLPCL+QGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALL+LMDATCRR
Sbjct: 361 ETRLPCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRR 420

Query: 463 ATAPPAPPDGLSLVDVGYTEFDPQNCFILND 492
           ATAPPAPPDGLSLVDVGYT+FD Q CFILND
Sbjct: 421 ATAPPAPPDGLSLVDVGYTDFDSQICFILND 444

[Close]

BLAST of CmaCh11G003290 vs. NCBI nr
Match: gi|1009129371|ref|XP_015881730.1| (PREDICTED: tRNA pseudouridine synthase A [Ziziphus jujuba])

HSP 1 Score: 590.5 bits (1521), Expect = 2.7e-165
Identity = 302/427 (70.73%), Postives = 340/427 (79.63%), Query Frame = 1


Query: 68  KCLMENRAQK---KDYLHYNHTDRCRNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLS 127
           K  MEN  Q    K Y HYNHTD CR +RWT+RESYQ MY RPW +VLDFYS+ +N  LS
Sbjct: 27  KIHMENFCQPPPDKVYFHYNHTDPCRFSRWTARESYQFMYARPWNQVLDFYSNLINANLS 86

Query: 128 LSSL-RTETVRDHDDTEIQPVCNTAELNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQK 187
           LS+L   ET   H+  EI  +  TAEL     ++ +GRWAR TFKIVLSYHG SFDGWQK
Sbjct: 87  LSALFGPETYHVHNAAEIPNISETAELKSVSPENRSGRWARLTFKIVLSYHGGSFDGWQK 146

Query: 188 QPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTW 247
           QP LNTVQG+VEKSLGKFVDEKKAQ LKD+CLP+EGCAVVAGRTDKGVTAL+QVCSFYTW
Sbjct: 147 QPGLNTVQGLVEKSLGKFVDEKKAQVLKDKCLPLEGCAVVAGRTDKGVTALQQVCSFYTW 206

Query: 248 RTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNF 307
           R D+K +DIE +IN+AAPG LRV SVS+VSR+FHPNFSAKWRRYLYIFP  DGE+ + + 
Sbjct: 207 RKDIKSEDIEVAINSAAPGTLRVKSVSEVSRVFHPNFSAKWRRYLYIFPFNDGEDGQQSS 266

Query: 308 AILEDVENSREEEYRDKIEVLHGECKDEILNNLILSQDDEEPASANKPQTFSIMRVNQLL 367
              ED+E  R  E  D++    GE   E + NLI++ D+EE  S NKP+TFS+ RVNQLL
Sbjct: 267 PSGEDIEQFRSNESGDELNNGCGESHYESVQNLIIN-DNEEIDSGNKPKTFSVRRVNQLL 326

Query: 368 RKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVAN 427
           ++LEGKLLSYKMFARDTKASRN GPPTECF+YHARA EARLPC D   GR VMCVELVAN
Sbjct: 327 QQLEGKLLSYKMFARDTKASRNVGPPTECFMYHARATEARLPCPDSIEGRRVMCVELVAN 386

Query: 428 RFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDP 487
           RFLRKMVRVLVAT+IREAAAGA EDALLKLMDATCRRATAPPAP DGL LVDVGY EF+P
Sbjct: 387 RFLRKMVRVLVATSIREAAAGAEEDALLKLMDATCRRATAPPAPADGLCLVDVGYAEFNP 446

Query: 488 QNCFILN 491
           QN  I N
Sbjct: 447 QNRLICN 452

[Close]

BLAST of CmaCh11G003290 vs. NCBI nr
Match: gi|255566350|ref|XP_002524161.1| (PREDICTED: tRNA pseudouridine synthase A isoform X1 [Ricinus communis])

HSP 1 Score: 575.9 bits (1483), Expect = 6.9e-161
Identity = 288/418 (68.90%), Postives = 330/418 (78.95%), Query Frame = 1


Query: 72  ENRAQKKDYLHYNHTDRCRNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSLSSL-RT 131
           E + Q K Y HYNHTD C++ RWT+RES+Q MY RPWQEV DFYS+ VNGRLS   L R+
Sbjct: 26  ETKTQNKIYFHYNHTDSCKSFRWTARESFQFMYARPWQEVSDFYSNVVNGRLSFLELFRS 85

Query: 132 ETVRDHDDTEIQPVCNTAELNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTV 191
           +     DD +IQ   N  EL     +D  GRWAR  FKI LSYHG SFDGWQKQP LNTV
Sbjct: 86  QMHFVRDDAKIQEDSNKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTV 145

Query: 192 QGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQ 251
           QG+VEKSLGKFVDEKKAQQLK+ C P+EGCAVVAGRTDKGV+ALRQVCSFYTWR DV+P 
Sbjct: 146 QGLVEKSLGKFVDEKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVRPH 205

Query: 252 DIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFAILEDVE 311
           +IE +IN++APGK+RV+SVS+VSR+FHPNFSAKWRRYLYIFP+ DGE+ E +F   ED+E
Sbjct: 206 EIEDAINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQSFD-SEDLE 265

Query: 312 NSREEEYRDKIEVLHGECKDEILNNLILSQDDEEPASANKPQTFSIMRVNQLLRKLEGKL 371
           N R  E  D+      E   E     +++ D +E   A KP+ FSI RVNQLL++LEGKL
Sbjct: 266 NLRSYEKYDEQRNGCAELTSEEHVEELITSDKDELEGAKKPRIFSICRVNQLLQQLEGKL 325

Query: 372 LSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMV 431
           LSYK+FARDTKASRN GPPTECF+YHARA EARLPC D G GR VMCVELVANRFLRKMV
Sbjct: 326 LSYKIFARDTKASRNVGPPTECFIYHARATEARLPCPDHGEGRKVMCVELVANRFLRKMV 385

Query: 432 RVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFI 489
           RVLVAT+IREAAAGA +DALLKLMDA+CRRA+APPAPPDGL L DVGYTEFD Q C +
Sbjct: 386 RVLVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLFDVGYTEFDAQICIV 442

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BLAST of CmaCh11G003290 vs. NCBI nr
Match: gi|802707316|ref|XP_012084292.1| (PREDICTED: uncharacterized protein LOC105643709 [Jatropha curcas])

HSP 1 Score: 573.2 bits (1476), Expect = 4.5e-160
Identity = 286/418 (68.42%), Postives = 336/418 (80.38%), Query Frame = 1


Query: 74  RAQKKDYLHYNHTDRCRNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSLSSL-RTET 133
           +AQ K Y+HYNHTD C+  RWT+RES+Q MY RPW+EV++FYS+ VNG LSLS L  T+ 
Sbjct: 38  QAQNKVYVHYNHTDSCKFLRWTARESFQFMYARPWEEVVEFYSNVVNGHLSLSELFGTQI 97

Query: 134 VRDHDDTEIQPVCNTAELNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQG 193
              HD+ +IQ     ++L     KD  GRWAR TFKIVLSYHG SFDGWQKQP LNTVQG
Sbjct: 98  HFAHDNAKIQDSFVESKLEDFSDKDKFGRWARVTFKIVLSYHGASFDGWQKQPGLNTVQG 157

Query: 194 VVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDI 253
           +VE+SLG FVDEKK+QQLKD+C P+EGCAVVAGRTDKGV+A +Q+CSFYTWR DV+P +I
Sbjct: 158 LVERSLGTFVDEKKSQQLKDKCKPLEGCAVVAGRTDKGVSAFQQICSFYTWRKDVRPHEI 217

Query: 254 EGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFAILEDVENS 313
           E +IN++APGKLRV+SVS+VSR FHPNFSAKWRRYLYIFPL DGEN        EDVEN 
Sbjct: 218 EDAINSSAPGKLRVVSVSEVSRAFHPNFSAKWRRYLYIFPLNDGENG-------EDVENF 277

Query: 314 REEEYRDKIEVLHGE--CKDEILNNLILSQDDEEPASANKPQTFSIMRVNQLLRKLEGKL 373
              +  D+     GE   K+++  + I+  D +EP    KP+TFS+ RVNQLL++LEGKL
Sbjct: 278 SSHDKYDEQRPGSGELTSKEKLDESFII--DKDEPEGTIKPRTFSVCRVNQLLQQLEGKL 337

Query: 374 LSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMV 433
           LSYK+FARDTKASRNEGPPTECF+YHARA E RLPC D G GR V+C+ELVANRFLRKMV
Sbjct: 338 LSYKIFARDTKASRNEGPPTECFIYHARATEMRLPCSDHGQGRKVICIELVANRFLRKMV 397

Query: 434 RVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFI 489
           RVLVAT+IREAAAGA +DALLKLMDA+CRRA+APPAPPDGL LVDVGYTEFDPQ+C I
Sbjct: 398 RVLVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLVDVGYTEFDPQSCII 446

The following BLAST results are available for this feature:

BLAST of CmaCh11G003290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRUA_LACCB	2.8e-13	35.77	tRNA pseudouridine synthase A OS=Lactobacillus casei (strain BL23) GN=truA PE=3 ...	[more]
TRUA_LACC3	2.8e-13	35.77	tRNA pseudouridine synthase A OS=Lactobacillus casei (strain ATCC 334) GN=truA P...	[more]
TRUA_LEPBP	6.3e-13	35.77	tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc ...	[more]
TRUA_LEPBA	6.3e-13	35.77	tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc ...	[more]
TRUA_METI4	8.2e-13	37.10	tRNA pseudouridine synthase A OS=Methylacidiphilum infernorum (isolate V4) GN=tr...	[more]

BLAST of CmaCh11G003290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV59_CUCSA	1.9e-210	82.71	tRNA pseudouridine synthase OS=Cucumis sativus GN=Csa_1G025830 PE=3 SV=1	[more]
B9SDU2_RICCO	4.8e-161	68.90	tRNA pseudouridine synthase OS=Ricinus communis GN=RCOM_1712560 PE=3 SV=1	[more]
A0A067JV59_JATCU	3.1e-160	68.42	tRNA pseudouridine synthase OS=Jatropha curcas GN=JCGZ_19781 PE=3 SV=1	[more]
W9S3H9_9ROSA	1.4e-157	67.99	tRNA pseudouridine synthase OS=Morus notabilis GN=L484_008208 PE=3 SV=1	[more]
U5FJE5_POPTR	2.3e-155	68.01	tRNA pseudouridine synthase OS=Populus trichocarpa GN=POPTR_0018s14400g PE=3 SV=...	[more]

BLAST of CmaCh11G003290 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35400.2	9.7e-105	55.86	Pseudouridine synthase family protein	[more]
AT1G20370.1	1.0e-08	31.08	Pseudouridine synthase family protein	[more]

BLAST of CmaCh11G003290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107096\|ref\|XP_008453520.1\|	7.0e-214	84.26	PREDICTED: uncharacterized protein LOC103494203 [Cucumis melo]	[more]
gi\|449439176\|ref\|XP_004137363.1\|	2.8e-210	82.71	PREDICTED: uncharacterized protein LOC101205562 [Cucumis sativus]	[more]
gi\|1009129371\|ref\|XP_015881730.1\|	2.7e-165	70.73	PREDICTED: tRNA pseudouridine synthase A [Ziziphus jujuba]	[more]
gi\|255566350\|ref\|XP_002524161.1\|	6.9e-161	68.90	PREDICTED: tRNA pseudouridine synthase A isoform X1 [Ricinus communis]	[more]
gi\|802707316\|ref\|XP_012084292.1\|	4.5e-160	68.42	PREDICTED: uncharacterized protein LOC105643709 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001406	PsdUridine_synth_TruA
IPR020094	Pseudouridine synthase I, TruA, N-terminal
IPR020095	PsdUridine_synth_TruA_C
IPR020097	PsdUridine_synth_TruA_a/b_dom
IPR020103	PsdUridine_synth_cat_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0001522	pseudouridine synthesis
GO:0009451	RNA modification

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0009982	pseudouridine synthase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0008033	tRNA processing
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G003290.1	CmaCh11G003290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 112..312 score: 1.6E-194coord: 350..488 score: 1.6E
IPR020094	Pseudouridine synthase I, TruA, N-terminal	GENE3D	G3DSA:3.30.70.580		coord: 166..282 score: 1.2
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	G3DSA:3.30.70.660		coord: 354..480 score: 4.2E-21coord: 283..311 score: 4.2
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 405..478 score: 2.
IPR020103	Pseudouridine synthase, catalytic domain	unknown	SSF55120	Pseudouridine synthase	coord: 166..306 score: 6.76E-46coord: 349..483 score: 6.76
None	No IPR available	PANTHER	PTHR11142:SF10	TRNA PSEUDOURIDINE SYNTHASE	coord: 112..312 score: 1.6E-194coord: 350..488 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh11G003290	Cucsa.111790	Cucumber (Gy14) v1	cgycmaB0259
CmaCh11G003290	Cla018900	Watermelon (97103) v1	cmawmB143
CmaCh11G003290	Csa1G025830	Cucumber (Chinese Long) v2	cmacuB087
CmaCh11G003290	MELO3C017384	Melon (DHL92) v3.5.1	cmameB120
CmaCh11G003290	ClCG06G014090	Watermelon (Charleston Gray)	cmawcgB135
CmaCh11G003290	CSPI01G04590	Wild cucumber (PI 183967)	cmacpiB086
CmaCh11G003290	CmoCh11G003350	Cucurbita moschata (Rifu)	cmacmoB112
CmaCh11G003290	Lsi06G012560	Bottle gourd (USVL1VR-Ls)	cmalsiB143
CmaCh11G003290	Cp4.1LG18g06710	Cucurbita pepo (Zucchini)	cmacpeB132
CmaCh11G003290	Cp4.1LG04g13450	Cucurbita pepo (Zucchini)	cmacpeB153
CmaCh11G003290	MELO3C017384.2	Melon (DHL92) v3.6.1	cmamedB128
CmaCh11G003290	CsaV3_1G004580	Cucumber (Chinese Long) v3	cmacucB0101
CmaCh11G003290	Cla97C06G123540	Watermelon (97103) v2	cmawmbB139
CmaCh11G003290	Bhi02G000128	Wax gourd	cmawgoB0152
CmaCh11G003290	CsGy1G004490	Cucumber (Gy14) v2	cgybcmaB029
CmaCh11G003290	Carg09083	Silver-seed gourd	carcmaB0830

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G003290	Cucurbita maxima (Rimu)	cmacmaB072
CmaCh11G003290	Cucurbita moschata (Rifu)	cmacmoB099
CmaCh11G003290	Silver-seed gourd	carcmaB1092