CSPI01G04590 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G04590
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	tRNA pseudouridine synthase
Location	Chr1 : 2893095 .. 2898958 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATCTTCTACGTGGATTTACAATCTCGTCCCTGCCCGACGGCGGCTGCAACTGCAAAATACGGTCGTCCGCTCTCAGGCGGGGCGGGGCGGGGCGGGCGGTTGTTATGATACCAAATCCGAGGGCCAGACTTGTATCACCATCAAGTGCCGGTTTTGGTTTGAAGATTCTGATGGAGAATCGAGCTCAACGAAAAGATTATCTTCACTATAACCACACTGATCGCTGTAGAAATGCTAGATGGACTGCCAGGTTTTTCTTTTGTATAATTTTCAATATCTATCGCTTTATTTGATTTTAGATTTTACTCATAGAATGAGCTTCGTACTATTATAAATGGTAATTCAATCTTAATCTGATAAGGTTGTTGTTATGTTATTGGTAGGGAAAGCTATCAATTCATGTATGGAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCTCACGCTGTTAATGGAAGGTTTTCTCTTAGCTCATTGCTTGGAACTGAGGCGAGTCTCTAATATCTTCGTTATCTTTAAATTGGTTCCTCTTTCTCTATAATTATTCCGTTTCTTGAAATAATAGCAACGAAATCGTGAGCTAGGACTCCGTTTCCCTCCCTTGCCAGTTTATGAATCCTTCTCTTTTGTCATAATGTTCTAGTTGGACAATTTTTTTTTTTTTTTTGCTACCTCTCGATATTGATATCTATGGTTAATTTTCATGCAATGGAAGTCCTAACTCTTAAAGGAATGTTATTTCTTCCGTTCAGATTATTTGATTTTTAAAGTAATGGCTACCATCTAAGATTATCAATTAACCATCATATAAATGGCTAAAAGGCCAAAGGTTTAATCTATGGCAGGCAACTACCTAGGAATCAATTTTAGTTTCTTTGACATACAAATGTTGTACGGTCAGACAAGTTGTTCCATGAGATTCTTCAAGGTGGATATAAGTTGGTCCGAACATTACAATATCAAAACAATAATGATAATAAATAATAATCTAAAACTGTCAATTGCTTGGACATTGTATTGTGCATGTTCTAAATTTAGTTTGGATTATAAGTTCTGGAGATGATTTTAAATGAAATCCTTGCTATTGGTTATTACACTTGATTTACCAATCATGTTTATGTCTTTTTAATTTTTTTTTTTATAAATTCCATTGGTCGATTCAAATTAGGAGAAATGAAGATGAAAATTTTGTTCTTTAATTATCTTGTACAAAACAAGAAGATATCATTTATTTTTTATTTATTTATTGTATACAGTATTTTATCAACAGATATGTCGTGATCATGATGATGCTGAGACTCCATCGATTTACAACTCAGCAGAGTTAAACAGAGCTGCAGTTAAAGATAAGACTGGGAGATGGGCAAGGGCAACATTTAAGATAGTTCTTTCCTACGATGGAAATTCTTTTGATGGGTGGCAAAAGCAGCCAGGCTTGAATACTGTTCAGGGGTAGGCTTATTTCGTGGAATTTACCATATGCGAAAGTAATATTGTATGCAATTGGGAGCTAGCGACATTCTTTTCGTTATTGAATTTTTAAACTAAAGAGTTGTTAAGAACCTGTAAATGTAATTTATAGTAAGTGTTTGAGAACTTAGTTCTAGAGGTACAATTGAAAATCTCATACCTTCATTTCAAATGAAACTTTTGTCTTGTGGACAATGCCCAAGTTAAGTCATTCAACCTTGTTAATCTCACCTTTCTGGTACTGTATCTTCTTATTCCAGTACGAGAGTTTAAAGTACTGTTTTAATATCTTTAGATTAGATGTATAAATAGTTTGATTTCAATCCAGAGATGGTAAACACTGATGTATCTGGATTATGTCGACTTGCATCCTTTGGCAGCTTGGTAGAAAGATCTCTAGGGAAGTTTGTAGATGAGAAGAAAGCTCAGATGCTCAAAGATAAATGCTTACCATTAGAAGGATGTGCTTTGGTTGCTGGGCGCACTGACAAAGGGGTGACAGCTCTGCGACAAGTTTGCTCATTTTGTATGTTGGCTTCCTAATCTCTGTTGATATGATTTTTTATTGTATATTTAATTGCATAACTATGTTTTCAGTTTTAGATTCTATCTCAGCTCAAAAATGAACTCTTATATTAGAATAAATTATATCTTTTATATCATTTCTTGACATCTTTAATAGTTGCAATTAATTGCTTGTCACATCCATTTCATGAACTCCACTTTGGTTGTGCTTCACCTGAACGCTCCAATAGTCAAATAGGTGATGTTGTCCTGACTGCCCTATGATCGAAGTGTTGGAAGGGTATGCTAGATTACCTGTTAAAAGCAATTAGTATTGAAACAAGGGAGGTGCGAAGTCCAAGAATTACTTCCCAGTAAAGTGTAGCAATAGTAAAAAAAAAAAATTGTACTTCTGACGGCATTTTAATTAGGTTAATATTTAGAAGCTTTTACCAAGATTCCCTTCGCTGATTATTACTTCAAGTAGTTTTGCAGAGTGGAAGTTGGGAGGGGATTTCTTTTTACCATCTGTAGAATTCCTTGTGTGATGCTATGGAAAGGAAAATTTAGCAAAGAAGATTGAAGTTTTTATTGGAATTGTTTCCAATCTGTGCCATTATTCCAACAATAGGATTCAAGCCAGAAATCCAAACTACTAGGCCGTCACAGTACCAATTATACAATTCAACCTGAACCATGCTTCCTTTGGTTTGAATTCTTTAACATAAATACATACATGGAACTTGTTTGGAAAGAGCAATTACTGTATGTGTACTTTTTGAGTTTTTGCTGTTTCTTTCCATTTTGGTTTTAAATTATCCTTGGAGGGTAATATTCTCTTTCTGACTTCACCCACTTAATTTTGTTATTGTTTTCTATTTTAGAGAATCACTGTTCATCTTTGGTTAAACTCCCACACTTGTAGATACTTGGCGTACCGATGTTAAACCTCAAGACATTGAAGATTCCATCAATAGTGCAGCTCCTGGAAAACTCAGAACATCCTCTGTCTCTCAGGTAAAATTAAGGTTATTGGAAATGATTGTGGTGCCCCCTGGAAAACTCACAAGTTACTTACTGTTGTAGGTCTCTCGAATCTTCCATCCAAACTTCTCTGCTAAATGGAGACGATATCTATATATTCTTCCTCTGAATGATGGAGAGAACATGGAGCCAGATTCTACAACTTGGGAAAATGTAGAAAATAGAGAAGAGGAAAATTTTGTTAAAATAGAAGCCTCAAATGGTGAAAAATGTGTGGACGGGATTCATGATAATTTGGTCCTCAGTCCAAATGACGAGGAGCTTGTGTCGGCTGATAAACCTCAAACATTTAGTATAACGAGGGTTAACCAACTACTTAGGAAACTAGAAGGGAAGTTGTTGTCGTACAAGATGTTTGCACGTGACACCAAAGCATCGAGAAATGAGTGAGAATCATGAACTGATCCAATTATTGGCTCTTTTTTGGAAGTCATTCTATCTTCTAATTTCATTAATTCTTGTTGTTTTTCTTCTTATTCCGTTTATAAAGAATATCACCAATTTTCTCTTATTTCTGCTAGTCACTCCTCTAGGAGCCATTTATAGAAATGTGAAGAGGGATGAATCCCGCGATGTGCTCTTTTGTGGGATCTCTGGATTGAAAGGAACAACAGTTTTTTCTCAATTTCCTTCATACAAATTAGGAAAATGAGGAGAGTTGGATAATGGAAAATTTTAAGCATCAACATGATAATTTTGTTAAGCCTCAGTTTTAAGGATCACTAACTGTTATTAAGTATTGTCTGTTCCATGAACAGGTCTTTTATGTTCTTCGTTTGGTTCTTCTGGTTCTCATTCTGTATTGAGTTCTCTTGAGTGAGGAAAAATAAATAAAACAATTAGCAGGATAGATAGTCACTGTGTTTCTTCTGGTTCTCATTCTGTATTGAGTTCTTTTGATTAGTGTAATTGTGGTATTAAAAAATACAGGGAGAAAGAGATTAATGTGCTTGTATCCTGAACATTAGCAGGATAGATAGTCACTGACTAAACAAAGTTAGTTATAGAATTTATATGCCAAGATTTTTGTTTTGTTTTTGTCAAATATGTGATTAAAGTACTTGCTCGCTTTCTTTTGAGAAATGCTTTCTTATCAATGACGGGAAGATGTTCAGAACTTTCTGACATGTACTAATGACAACTATTGTCCTTTTCAGAGGTCCACCTACGGAGTGTTTTGTTTATCATGCACGAGCAGCGGAAACTAGATTGCCATGCTTGGTATTTTTCCTACTTGGCCTCTTCATACTCTTGTCCTCCTTTTCTATGATTATACTTTTCCTTCTACACTTGAACCCCTCTTGAAATCTATCTGTAGTTTTGTAACAATATTCTATACTTCATAGCTCACTTACGCTGAAATGAGGTATTACCATGTTATTTGCATTGTGCTTTCGACTGATTCAGAACACTGAAAACAGATGATGAGCTTGTGGAAGAGTATGAACCGAGGAAACTTAAATAGAAAATTACTTTTACATTGTATCTTCAATGTGAAGTATTGGCATAGCAAACTACCTGTAGTTATGTGCTCGATTGAACGAAAATTCAAATTTTATTGACAATGGTTGCTCTTGGCCTCTCTTCTGTTTCTCTTCTGTTTCTCTTCTTCTTATTAGTTTTTGTATTCTAATCTTCTCTCTCTTTTCTCTCTAAACTTTTTTTCTTTTAGGAGAGGTTGTTTTCCTCCTATTTATATAGGGCTTTGTTTCTTAAATTGATACCTTATTCTTGGTTCGTTTTGGCTTGGATTTTCGGGATAATGGAAGCATGTTTCCTATTCCTCTCAACATGCTATCAACATTTTTCTCTATTGAACTGAATCTTTTATAGCATCAGCTGGGCTTCTTCCTACATTTAATCTTTTTCTGTCCAATTTTTTTTAATCTAATGAACTAATGAATGCAAGTACTCCAAATTTGGGTACCTGACTTAGTGTTCTATTGACAGGAGCAAGGAGTAGGAAGAAGTGTTATGTGCGTTGAGCTGGTTGCTAATCGCTTCCTGCGGAAGGTATCATATCATCTCTGGGGTTGACCTATGCTATAGATTATATTGTACAGATCGCAAAATTGCTCTATTAAAATTCCGATAATTCTTTCCTCAACTGCTTAAACTTGAGAGTTAATATCTTAAATATCAGGCTATCAACAAGAGGAATTTCCCCTTAGTTTTAGCTAAATGAAAAAATGGCACTAATTATTACGTCTTCGGTTAAATCCTTGGTTTTTTTAGCAGTTCAACCAACTAATGTTTAATATTCTACGAGTTTTCTTCACACTCAAATGTTGTAGGGTCAAGTTGTGAGATTTGTTGAGGTGTGCTATGTATAAGCTGACTTAGACACTCACAGATATTAAAATAACGATAATAATAATGGAATCTAACGATGACCCTTGCAGATGGTACGTGTACTTGTTGCAACAGCAATTAGAGAAGCAGCTGCTGGTGCAGGAGAGGATGCGTTACTAGAGCTGATGGATGCCACATGTCGACGTGCCACTGCACCACCTGCGCCTCCTGATGGCCTCAGTCTTGTTGATGTAGGGTATACAGATTTTGATTCACAAATTTGCTTCATTTTAAATGACTAATTTTGCCCTTCATTTTTTAACGTATCACCCACCCTTTTGATTGGTGGTGTTATTATTACCATATTGATTTAGTGATTGCATTGTAGGGTTTGAAAGTTGGTTTGCGTTTTATCACACATCACTTTAGGGTGTTTTGTATTTGTGTACGGTGAGTGACTAAGTTTTGTTTTGATCTTCACACGGATCCGTAAGACGACTCTAAATAGAATGAATTAAAGTTTATATAAAACAAATTACTACTTAACTGCTG

mRNA sequence

ATGATACCAAATCCGAGGGCCAGACTTGTATCACCATCAAGTGCCGGTTTTGGTTTGAAGATTCTGATGGAGAATCGAGCTCAACGAAAAGATTATCTTCACTATAACCACACTGATCGCTGTAGAAATGCTAGATGGACTGCCAGGGAAAGCTATCAATTCATGTATGGAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCTCACGCTGTTAATGGAAGGTTTTCTCTTAGCTCATTGCTTGGAACTGAGATATGTCGTGATCATGATGATGCTGAGACTCCATCGATTTACAACTCAGCAGAGTTAAACAGAGCTGCAGTTAAAGATAAGACTGGGAGATGGGCAAGGGCAACATTTAAGATAGTTCTTTCCTACGATGGAAATTCTTTTGATGGGTGGCAAAAGCAGCCAGGCTTGAATACTGTTCAGGGCTTGGTAGAAAGATCTCTAGGGAAGTTTGTAGATGAGAAGAAAGCTCAGATGCTCAAAGATAAATGCTTACCATTAGAAGGATGTGCTTTGGTTGCTGGGCGCACTGACAAAGGGGTGACAGCTCTGCGACAAGTTTGCTCATTTTATACTTGGCGTACCGATGTTAAACCTCAAGACATTGAAGATTCCATCAATAGTGCAGCTCCTGGAAAACTCAGAACATCCTCTGTCTCTCAGGTCTCTCGAATCTTCCATCCAAACTTCTCTGCTAAATGGAGACGATATCTATATATTCTTCCTCTGAATGATGGAGAGAACATGGAGCCAGATTCTACAACTTGGGAAAATGTAGAAAATAGAGAAGAGGAAAATTTTGTTAAAATAGAAGCCTCAAATGGTGAAAAATGTGTGGACGGGATTCATGATAATTTGGTCCTCAGTCCAAATGACGAGGAGCTTGTGTCGGCTGATAAACCTCAAACATTTAGTATAACGAGGGTTAACCAACTACTTAGGAAACTAGAAGGGAAGTTGTTGTCGTACAAGATGTTTGCACGTGACACCAAAGCATCGAGAAATGAAGGTCCACCTACGGAGTGTTTTGTTTATCATGCACGAGCAGCGGAAACTAGATTGCCATGCTTGGAGCAAGGAGTAGGAAGAAGTGTTATGTGCGTTGAGCTGGTTGCTAATCGCTTCCTGCGGAAGATGGTACGTGTACTTGTTGCAACAGCAATTAGAGAAGCAGCTGCTGGTGCAGGAGAGGATGCGTTACTAGAGCTGATGGATGCCACATGTCGACGTGCCACTGCACCACCTGCGCCTCCTGATGGCCTCAGTCTTGTTGATGTAGGGTATACAGATTTTGATTCACAAATTTGCTTCATTTTAAATGACTAA

Coding sequence (CDS)

ATGATACCAAATCCGAGGGCCAGACTTGTATCACCATCAAGTGCCGGTTTTGGTTTGAAGATTCTGATGGAGAATCGAGCTCAACGAAAAGATTATCTTCACTATAACCACACTGATCGCTGTAGAAATGCTAGATGGACTGCCAGGGAAAGCTATCAATTCATGTATGGAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCTCACGCTGTTAATGGAAGGTTTTCTCTTAGCTCATTGCTTGGAACTGAGATATGTCGTGATCATGATGATGCTGAGACTCCATCGATTTACAACTCAGCAGAGTTAAACAGAGCTGCAGTTAAAGATAAGACTGGGAGATGGGCAAGGGCAACATTTAAGATAGTTCTTTCCTACGATGGAAATTCTTTTGATGGGTGGCAAAAGCAGCCAGGCTTGAATACTGTTCAGGGCTTGGTAGAAAGATCTCTAGGGAAGTTTGTAGATGAGAAGAAAGCTCAGATGCTCAAAGATAAATGCTTACCATTAGAAGGATGTGCTTTGGTTGCTGGGCGCACTGACAAAGGGGTGACAGCTCTGCGACAAGTTTGCTCATTTTATACTTGGCGTACCGATGTTAAACCTCAAGACATTGAAGATTCCATCAATAGTGCAGCTCCTGGAAAACTCAGAACATCCTCTGTCTCTCAGGTCTCTCGAATCTTCCATCCAAACTTCTCTGCTAAATGGAGACGATATCTATATATTCTTCCTCTGAATGATGGAGAGAACATGGAGCCAGATTCTACAACTTGGGAAAATGTAGAAAATAGAGAAGAGGAAAATTTTGTTAAAATAGAAGCCTCAAATGGTGAAAAATGTGTGGACGGGATTCATGATAATTTGGTCCTCAGTCCAAATGACGAGGAGCTTGTGTCGGCTGATAAACCTCAAACATTTAGTATAACGAGGGTTAACCAACTACTTAGGAAACTAGAAGGGAAGTTGTTGTCGTACAAGATGTTTGCACGTGACACCAAAGCATCGAGAAATGAAGGTCCACCTACGGAGTGTTTTGTTTATCATGCACGAGCAGCGGAAACTAGATTGCCATGCTTGGAGCAAGGAGTAGGAAGAAGTGTTATGTGCGTTGAGCTGGTTGCTAATCGCTTCCTGCGGAAGATGGTACGTGTACTTGTTGCAACAGCAATTAGAGAAGCAGCTGCTGGTGCAGGAGAGGATGCGTTACTAGAGCTGATGGATGCCACATGTCGACGTGCCACTGCACCACCTGCGCCTCCTGATGGCCTCAGTCTTGTTGATGTAGGGTATACAGATTTTGATTCACAAATTTGCTTCATTTTAAATGACTAA

Homology

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BLAST of CSPI01G04590 vs. Swiss-Prot
Match: TRUA_LEPBA (tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=truA PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.7e-13
Identity = 53/179 (29.61%), Postives = 80/179 (44.69%), Query Frame = 1


Query: 120 FKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGR 179
           + +++ YDG  F+GWQKQ  L TVQ  +E +LG  +    A  L            VAGR
Sbjct: 4   YALLVEYDGTHFNGWQKQKNLPTVQSSIESALGIILRRNPASRLS-----------VAGR 63

Query: 180 TDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRR 239
           TD GV AL  VC+F T         +  S+N+  P  +   +V +V   FH  FS   R 
Sbjct: 64  TDTGVHALGMVCNFKTEHPIPNFHKLLVSLNALTPTGVSVKNVVEVPSDFHARFSCTGRE 123

Query: 240 YLYILPLNDGENMEPDSTT--------WENVE--------NREEENFVKIEASNGEKCV 283
           Y+Y L  +  E+   +           WE V+         ++  +F K ++  G++ V
Sbjct: 124 YIYKLYYSKYESSFVEGRAFWVKGHIDWERVKKQLQVLVGEKDFRSFTKAKSMAGKRAV 171

[Close]

BLAST of CSPI01G04590 vs. Swiss-Prot
Match: TRUA_LEPBP (tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=truA PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.7e-13
Identity = 53/179 (29.61%), Postives = 80/179 (44.69%), Query Frame = 1


Query: 120 FKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGR 179
           + +++ YDG  F+GWQKQ  L TVQ  +E +LG  +    A  L            VAGR
Sbjct: 4   YALLVEYDGTHFNGWQKQKNLPTVQSSIESALGIILRRNPASRLS-----------VAGR 63

Query: 180 TDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRR 239
           TD GV AL  VC+F T         +  S+N+  P  +   +V +V   FH  FS   R 
Sbjct: 64  TDTGVHALGMVCNFKTEHPIPNFHKLLVSLNALTPTGVSVKNVVEVPSDFHARFSCTGRE 123

Query: 240 YLYILPLNDGENMEPDSTT--------WENVE--------NREEENFVKIEASNGEKCV 283
           Y+Y L  +  E+   +           WE V+         ++  +F K ++  G++ V
Sbjct: 124 YIYKLYYSKYESSFVEGRAFWVKGHIDWERVKKQLQVLVGEKDFRSFTKAKSMAGKRAV 171

[Close]

BLAST of CSPI01G04590 vs. Swiss-Prot
Match: TRUA_DICT6 (tRNA pseudouridine synthase A OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=truA PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 9.7e-13
Identity = 55/169 (32.54%), Postives = 86/169 (50.89%), Query Frame = 1


Query: 120 FKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGR 179
           +K+ LSY G  F G+QKQPG  TVQG +E+ L         ++L D+ + + G    AGR
Sbjct: 4   WKVELSYIGKDFWGFQKQPGKRTVQGELEKVL---------KLLFDEDIKVIG----AGR 63

Query: 180 TDKGVTALRQVCSFYTWRT-DVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWR 239
           TD GV AL QV +F T  + +     +   +N   PG ++   V  V   FH  +SAK R
Sbjct: 64  TDAGVHALGQVVNFKTKESKNFSCDKLYKVLNKLLPGDIKIKKVEIVDDNFHARYSAKRR 123

Query: 240 RYLYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHD 288
            Y+Y++  N+ +N+      W  +    +++ + + A+       GIHD
Sbjct: 124 WYIYVIYNNEEKNLFLRDYCWW-INKPLDKDLLNLSAN----LFKGIHD 154

[Close]

BLAST of CSPI01G04590 vs. Swiss-Prot
Match: TRUA_BRAHW (tRNA pseudouridine synthase A OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=truA PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.2e-12
Identity = 45/124 (36.29%), Postives = 62/124 (50.00%), Query Frame = 1


Query: 121 KIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRT 180
           KI + YDG  F GWQ QP L TVQG + +++ K   EK         + + GC    GRT
Sbjct: 5   KITIQYDGTDFYGWQIQPNLRTVQGEIYKAVQKVYGEK---------ITIYGC----GRT 64

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRY 240
           D GV AL QV +F   +  V    +  ++NS     LR     ++   F+   SA +R Y
Sbjct: 65  DAGVHALGQVANFRVPKMLVPINKVHIALNSYLDRDLRIIKAEEMPDSFNARASATFREY 115

Query: 241 LYIL 245
           LYI+
Sbjct: 125 LYIV 115

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BLAST of CSPI01G04590 vs. Swiss-Prot
Match: TRUA_THESQ (tRNA pseudouridine synthase A OS=Thermotoga sp. (strain RQ2) GN=truA PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.8e-12
Identity = 42/137 (30.66%), Postives = 69/137 (50.36%), Query Frame = 1


Query: 123 VLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDK 182
           V+ YDG++F G+Q QP + TVQG++E +L +   ++                  AGRTD 
Sbjct: 7   VIEYDGSNFFGYQGQPDVRTVQGVIEDALERIFKQRIYTQ-------------AAGRTDA 66

Query: 183 GVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLY 242
           GV A  Q+ +F      +  +DI++++N+  P  +    V +VS+ FHP F  K R Y Y
Sbjct: 67  GVHANGQLIAFNCPNDRMTTEDIKNAMNANLPDDVYVKEVFEVSKNFHPRFDVKKRIYHY 126

Query: 243 ILPLNDGENMEPDSTTW 260
            +  +  +N+      W
Sbjct: 127 FILTSKQKNVFLRKYVW 130

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BLAST of CSPI01G04590 vs. TrEMBL
Match: A0A0A0LV59_CUCSA (tRNA pseudouridine synthase OS=Cucumis sativus GN=Csa_1G025830 PE=3 SV=1)

HSP 1 Score: 899.8 bits (2324), Expect = 1.3e-258
Identity = 441/444 (99.32%), Postives = 443/444 (99.77%), Query Frame = 1


Query: 1   MIPNPRARLVSPSSAGFGLKILMENRAQRKDYLHYNHTDRCRNARWTARESYQFMYGRPW 60
           MIPNPRARLVSPSSAGFGLKILMENRAQRKDYLHYNHTDRCR+ARWTARESYQFMYGRPW
Sbjct: 1   MIPNPRARLVSPSSAGFGLKILMENRAQRKDYLHYNHTDRCRSARWTARESYQFMYGRPW 60

Query: 61  QEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPSIYNSAELNRAAVKDKTGRWARATF 120
           QEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETP IYNSAELNRAAVKDKTGRWARATF
Sbjct: 61  QEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATF 120

Query: 121 KIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRT 180
           KIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRT
Sbjct: 121 KIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPNDEELVS 300
           LYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPND+ELVS
Sbjct: 241 LYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPNDQELVS 300

Query: 301 ADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360
           ADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL
Sbjct: 301 ADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360

Query: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAP 420
           EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAP
Sbjct: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAP 420

Query: 421 PDGLSLVDVGYTDFDSQICFILND 445
           PDGLSLVDVGYTDFDSQICFILND
Sbjct: 421 PDGLSLVDVGYTDFDSQICFILND 444

[Close]

BLAST of CSPI01G04590 vs. TrEMBL
Match: A0A067JV59_JATCU (tRNA pseudouridine synthase OS=Jatropha curcas GN=JCGZ_19781 PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 2.2e-160
Identity = 282/416 (67.79%), Postives = 336/416 (80.77%), Query Frame = 1


Query: 26  RAQRKDYLHYNHTDRCRNARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLLGTEI 85
           +AQ K Y+HYNHTD C+  RWTARES+QFMY RPW+EV++FYS+ VNG  SLS L GT+I
Sbjct: 38  QAQNKVYVHYNHTDSCKFLRWTARESFQFMYARPWEEVVEFYSNVVNGHLSLSELFGTQI 97

Query: 86  CRDHDDAETPSIYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQG 145
              HD+A+    +  ++L   + KDK GRWAR TFKIVLSY G SFDGWQKQPGLNTVQG
Sbjct: 98  HFAHDNAKIQDSFVESKLEDFSDKDKFGRWARVTFKIVLSYHGASFDGWQKQPGLNTVQG 157

Query: 146 LVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDI 205
           LVERSLG FVDEKK+Q LKDKC PLEGCA+VAGRTDKGV+A +Q+CSFYTWR DV+P +I
Sbjct: 158 LVERSLGTFVDEKKSQQLKDKCKPLEGCAVVAGRTDKGVSAFQQICSFYTWRKDVRPHEI 217

Query: 206 EDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSTTWENVENR 265
           ED+INS+APGKLR  SVS+VSR FHPNFSAKWRRYLYI PLNDGEN E D   + + +  
Sbjct: 218 EDAINSSAPGKLRVVSVSEVSRAFHPNFSAKWRRYLYIFPLNDGENGE-DVENFSSHDKY 277

Query: 266 EEENFVKIEASNGEKCVDGIHDNLVLSPNDEELVSADKPQTFSITRVNQLLRKLEGKLLS 325
           +E+     E ++ EK    + ++ ++  ++ E     KP+TFS+ RVNQLL++LEGKLLS
Sbjct: 278 DEQRPGSGELTSKEK----LDESFIIDKDEPE--GTIKPRTFSVCRVNQLLQQLEGKLLS 337

Query: 326 YKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGVGRSVMCVELVANRFLRKMVRV 385
           YK+FARDTKASRNEGPPTECF+YHARA E RLPC + G GR V+C+ELVANRFLRKMVRV
Sbjct: 338 YKIFARDTKASRNEGPPTECFIYHARATEMRLPCSDHGQGRKVICIELVANRFLRKMVRV 397

Query: 386 LVATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICFI 442
           LVAT+IREAAAGA +DALL+LMDA+CRRA+APPAPPDGL LVDVGYT+FD Q C I
Sbjct: 398 LVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLVDVGYTEFDPQSCII 446

[Close]

BLAST of CSPI01G04590 vs. TrEMBL
Match: B9SDU2_RICCO (tRNA pseudouridine synthase OS=Ricinus communis GN=RCOM_1712560 PE=3 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 1.8e-159
Identity = 283/421 (67.22%), Postives = 332/421 (78.86%), Query Frame = 1


Query: 24  ENRAQRKDYLHYNHTDRCRNARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLLGT 83
           E + Q K Y HYNHTD C++ RWTARES+QFMY RPWQEV DFYS+ VNGR S   L  +
Sbjct: 26  ETKTQNKIYFHYNHTDSCKSFRWTARESFQFMYARPWQEVSDFYSNVVNGRLSFLELFRS 85

Query: 84  EICRDHDDAETPSIYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTV 143
           ++    DDA+     N  EL   + +D+ GRWAR  FKI LSY G SFDGWQKQPGLNTV
Sbjct: 86  QMHFVRDDAKIQEDSNKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTV 145

Query: 144 QGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQ 203
           QGLVE+SLGKFVDEKKAQ LK+ C PLEGCA+VAGRTDKGV+ALRQVCSFYTWR DV+P 
Sbjct: 146 QGLVEKSLGKFVDEKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVRPH 205

Query: 204 DIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEP--DSTTWEN 263
           +IED+INS+APGK+R  SVS+VSR+FHPNFSAKWRRYLYI P+NDGE+ E   DS   EN
Sbjct: 206 EIEDAINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQSFDSEDLEN 265

Query: 264 VENREEENFVKIEASNG-EKCVDGIHDNLVLSPNDEELVSADKPQTFSITRVNQLLRKLE 323
           + + E+ +    E  NG  +     H   +++ + +EL  A KP+ FSI RVNQLL++LE
Sbjct: 266 LRSYEKYD----EQRNGCAELTSEEHVEELITSDKDELEGAKKPRIFSICRVNQLLQQLE 325

Query: 324 GKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGVGRSVMCVELVANRFLR 383
           GKLLSYK+FARDTKASRN GPPTECF+YHARA E RLPC + G GR VMCVELVANRFLR
Sbjct: 326 GKLLSYKIFARDTKASRNVGPPTECFIYHARATEARLPCPDHGEGRKVMCVELVANRFLR 385

Query: 384 KMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICF 442
           KMVRVLVAT+IREAAAGA +DALL+LMDA+CRRA+APPAPPDGL L DVGYT+FD+QIC 
Sbjct: 386 KMVRVLVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLFDVGYTEFDAQICI 442

[Close]

BLAST of CSPI01G04590 vs. TrEMBL
Match: W9S3H9_9ROSA (tRNA pseudouridine synthase OS=Morus notabilis GN=L484_008208 PE=3 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 5.3e-159
Identity = 290/428 (67.76%), Postives = 337/428 (78.74%), Query Frame = 1


Query: 18  GLKILMENRAQRKDYLHYNHTDRCRNARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSL 77
           G+ + ME  +  KDY+HYNH+D CR +RWTARESYQFMYGRPWQ+VLDFYS+ VNG  S 
Sbjct: 24  GVVVEMETHSTNKDYVHYNHSDPCRFSRWTARESYQFMYGRPWQQVLDFYSNLVNGTTSF 83

Query: 78  SSLLGT----EICRDHDDAETPSIYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDG 137
           SSL       ++  D  DAE P I +  ++     ++++GRWARATFK+VL Y G SFDG
Sbjct: 84  SSLFPLHKKYQVDDDDYDAEIPEISDD-KVKLKKSEERSGRWARATFKVVLGYHGASFDG 143

Query: 138 WQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSF 197
           WQKQPGLNTVQGLVERSLG+FVDEKKAQ+LKDKCLPLE C +VAGRTDKGVTAL+QVCSF
Sbjct: 144 WQKQPGLNTVQGLVERSLGRFVDEKKAQLLKDKCLPLEACTVVAGRTDKGVTALQQVCSF 203

Query: 198 YTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENME 257
           YTWR D+  QDIE++IN+AA GKL+  SVS+VSR+FHPNFSAKWRRYLYI P ND E+ E
Sbjct: 204 YTWRKDITCQDIEEAINNAALGKLKAKSVSEVSRVFHPNFSAKWRRYLYIFPFNDEEDEE 263

Query: 258 PDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPNDEELVSADKPQTFSITRVN 317
             +   EN+E  E     KIE+  GE   D    NL++  + EEL S  KP +FS++RV+
Sbjct: 264 QSNKNGENLETYE-----KIESGCGE-WNDESFGNLIID-DSEELESGKKPSSFSVSRVD 323

Query: 318 QLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGVGRSVMCVEL 377
           QLLR LEGKLLSYKMFARDTKASRNEGPPTECF+YHARAAE RLP  +   GR +MCVEL
Sbjct: 324 QLLRLLEGKLLSYKMFARDTKASRNEGPPTECFIYHARAAEARLPTSDCTEGRKIMCVEL 383

Query: 378 VANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGLSLVDVGYTD 437
           VANRFLRKMVRVLVAT+IREAAAGA EDALL+LMDATCRRATAPPAPPDGL LVDVGY++
Sbjct: 384 VANRFLRKMVRVLVATSIREAAAGAEEDALLKLMDATCRRATAPPAPPDGLCLVDVGYSE 443

Query: 438 FDSQICFI 442
           F    C I
Sbjct: 444 FKPNNCLI 443

[Close]

BLAST of CSPI01G04590 vs. TrEMBL
Match: A0A061GRT3_THECC (tRNA pseudouridine synthase OS=Theobroma cacao GN=TCM_039779 PE=3 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 1.2e-155
Identity = 283/426 (66.43%), Postives = 338/426 (79.34%), Query Frame = 1


Query: 22  LMENRAQRKDYLHYNHTDRCRNARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLL 81
           +MEN A+ K Y+HYNH+D C +ARWTARESY+FMY R WQ+V+DFYS+ VNGR +LS+L 
Sbjct: 32  VMENEAENKVYVHYNHSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTLF 91

Query: 82  GTEICRDHDDAETPSIYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLN 141
           GTE    HDD+ET  + +          +++GRW R TFKI++SY+G +FDGWQKQPGLN
Sbjct: 92  GTETSI-HDDSETVEVSDEKG-------ERSGRWERVTFKIIISYNGGAFDGWQKQPGLN 151

Query: 142 TVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVK 201
           TVQ +VERSLG+FVDEKKAQ+LK+K  PLEGCA+VAGRTDKGV+A+RQVCSFYTWR DVK
Sbjct: 152 TVQEIVERSLGRFVDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVK 211

Query: 202 PQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSTTWEN 261
           P DIED+INS APGKLR  SVS+VSR+FHPNFSAKWR YLYI PL+   N E +  + EN
Sbjct: 212 PWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLS---NQEIEKQSCEN 271

Query: 262 VENREEENFVKIEASNGEK--CVDGIH----DNLVLSPNDEELVSADKPQTFSITRVNQL 321
              +E ENF+     N ++   ++ I     +NL++S N   L +A+KP  FS+ RVNQL
Sbjct: 272 --KKEVENFISDGNYNEQRNGYLENIRWENVENLIISDN-MGLEAANKPTRFSVCRVNQL 331

Query: 322 LRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGVGRSVMCVELVA 381
           L++LE KLLSYKMFARDTKASRN GPPTECF+YHARAAE R+PC + G GR VMCVELVA
Sbjct: 332 LQQLERKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPCSDHGEGREVMCVELVA 391

Query: 382 NRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGLSLVDVGYTDFD 441
           NRFLRKMVRVLVAT+IREAAAGA EDALL+LM ATCRRATAPPAPPDGL LVDVGYT+FD
Sbjct: 392 NRFLRKMVRVLVATSIREAAAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDVGYTEFD 443

[Close]

BLAST of CSPI01G04590 vs. TAIR10
Match: AT5G35400.2 (AT5G35400.2 Pseudouridine synthase family protein)

HSP 1 Score: 386.7 bits (992), Expect = 1.9e-107
Identity = 200/362 (55.25%), Postives = 248/362 (68.51%), Query Frame = 1


Query: 32  YLHYNHTDRCRNARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLLGTEICRDHDD 91
           Y+HY+H D C  ARW ARE+++FMY RPWQ VLDFYS+AV G  S+ SL   +    HDD
Sbjct: 6   YVHYHHADACSKARWNARETFRFMYDRPWQHVLDFYSNAVEGNLSVLSLFQPKKSLVHDD 65

Query: 92  AETPSIYNSAELNRAAVKD-KTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERS 151
             T  +   +E   +  KD ++GRW R  FKIVLSY+G SFDGWQKQP L+TVQG+VE+S
Sbjct: 66  GITEEMLLESEPETSTRKDGRSGRWERVNFKIVLSYNGASFDGWQKQPDLHTVQGVVEKS 125

Query: 152 LGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSIN 211
           LG FVDE+KAQ+LK KC PLEG  LVAGRTDKGV+AL QVCSFYTWR D++P  IED+IN
Sbjct: 126 LGGFVDERKAQLLKKKCKPLEGRVLVAGRTDKGVSALNQVCSFYTWRKDIEPIAIEDAIN 185

Query: 212 SAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSTTWENV---ENREE 271
             A GKLR  S+S+VSR FHPNFSAKWRRYLYI PL+D E +       EN    EN+++
Sbjct: 186 KDASGKLRVVSISKVSRSFHPNFSAKWRRYLYIFPLDDAEPLRKSGENHENFIFDENKKK 245

Query: 272 ENFVKIEASNGEKCVDGIHDNLVLSPNDEELVSADKPQTFSITRVNQLLRKLEGKLLSYK 331
           +    +     E+ +    D L +      L   +KP  FS+++V+QLL+ L+GK+LSYK
Sbjct: 246 QRNGLLSEEIAEEVIMSEDDELEIEETSNALEVVEKPSDFSVSKVDQLLQHLQGKVLSYK 305

Query: 332 MFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGVGRSVMCVELVANRFLRKMVRVLV 390
           MFARDTKA+RNEGPPTECF+YHARAAE RL         S   V  VA  F   +V V++
Sbjct: 306 MFARDTKAARNEGPPTECFMYHARAAEIRL---------SSSVVHFVAWVFGGSIVLVIL 358

[Close]

BLAST of CSPI01G04590 vs. TAIR10
Match: AT1G20370.1 (AT1G20370.1 Pseudouridine synthase family protein)

HSP 1 Score: 60.1 bits (144), Expect = 4.1e-09
Identity = 41/136 (30.15%), Postives = 64/136 (47.06%), Query Frame = 1


Query: 114 RWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSL---GKFVDEKKAQMLKDKCLPL 173
           ++ R    IV ++ G  + G QK PG  T++G +E +L   G   D        D+  P 
Sbjct: 54  KYRRRKVAIVFAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPD-------ADRNKPR 113

Query: 174 EGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFH 233
                 + RTDKGV+A+ QV S    R  V P    + +NS  P ++R     +V+  F 
Sbjct: 114 NYEWARSARTDKGVSAVGQVVS---GRFYVDPPGFVERLNSKLPDQIRVFGYKRVAPSFS 173

Query: 234 PNFSAKWRRYLYILPL 247
                  RRY+Y++P+
Sbjct: 174 SKKFCDRRRYVYLIPV 179

[Close]

BLAST of CSPI01G04590 vs. TAIR10
Match: AT1G76120.1 (AT1G76120.1 Pseudouridine synthase family protein)

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-08
Identity = 39/125 (31.20%), Postives = 59/125 (47.20%), Query Frame = 1


Query: 122 IVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTD 181
           I+ ++ G  + G QK PG  T++G +E +L       ++   K K       A    RTD
Sbjct: 26  IIFAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPESIRGKPKLYDFARSA----RTD 85

Query: 182 KGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYL 241
           KGV+A+ QV S    R  V P    + +NS  P ++R      V+  F        RRY+
Sbjct: 86  KGVSAVGQVVS---GRFIVDPLGFVNRLNSNLPNQIRIFGYKHVTPSFSSKKFCDRRRYV 143

Query: 242 YILPL 247
           Y+LP+
Sbjct: 146 YLLPV 143

[Close]

BLAST of CSPI01G04590 vs. NCBI nr
Match: gi|449439176|ref|XP_004137363.1| (PREDICTED: uncharacterized protein LOC101205562 [Cucumis sativus])

HSP 1 Score: 899.8 bits (2324), Expect = 1.9e-258
Identity = 441/444 (99.32%), Postives = 443/444 (99.77%), Query Frame = 1


Query: 1   MIPNPRARLVSPSSAGFGLKILMENRAQRKDYLHYNHTDRCRNARWTARESYQFMYGRPW 60
           MIPNPRARLVSPSSAGFGLKILMENRAQRKDYLHYNHTDRCR+ARWTARESYQFMYGRPW
Sbjct: 1   MIPNPRARLVSPSSAGFGLKILMENRAQRKDYLHYNHTDRCRSARWTARESYQFMYGRPW 60

Query: 61  QEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPSIYNSAELNRAAVKDKTGRWARATF 120
           QEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETP IYNSAELNRAAVKDKTGRWARATF
Sbjct: 61  QEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATF 120

Query: 121 KIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRT 180
           KIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRT
Sbjct: 121 KIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPNDEELVS 300
           LYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPND+ELVS
Sbjct: 241 LYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPNDQELVS 300

Query: 301 ADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360
           ADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL
Sbjct: 301 ADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360

Query: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAP 420
           EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAP
Sbjct: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAP 420

Query: 421 PDGLSLVDVGYTDFDSQICFILND 445
           PDGLSLVDVGYTDFDSQICFILND
Sbjct: 421 PDGLSLVDVGYTDFDSQICFILND 444

[Close]

BLAST of CSPI01G04590 vs. NCBI nr
Match: gi|659107096|ref|XP_008453520.1| (PREDICTED: uncharacterized protein LOC103494203 [Cucumis melo])

HSP 1 Score: 869.4 bits (2245), Expect = 2.7e-249
Identity = 427/444 (96.17%), Postives = 433/444 (97.52%), Query Frame = 1


Query: 1   MIPNPRARLVSPSSAGFGLKILMENRAQRKDYLHYNHTDRCRNARWTARESYQFMYGRPW 60
           MIPNPRARLVSPSSAGFGLKILMENRAQ+KDYLHYNHTDRCRNARWTARES+QFMYGRPW
Sbjct: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60

Query: 61  QEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPSIYNSAELNRAAVKDKTGRWARATF 120
           QEVLDFYSHAVNGR SLSSLLGTEICRDHDDAETP IYNSAELNRAAVKDKTGRWARA F
Sbjct: 61  QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF 120

Query: 121 KIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRT 180
           KIVLSY GNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCA+VAGRT
Sbjct: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRT SVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPNDEELVS 300
           LYILPLNDGENMEPDS  WE+VENREEEN VKIEA NGEKCVDGIHDNLVLSPND+ELVS
Sbjct: 241 LYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDELVS 300

Query: 301 ADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360
           ADKPQTFSI RVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL
Sbjct: 301 ADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360

Query: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAP 420
           EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELM ATCRRATAPPAP
Sbjct: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPAP 420

Query: 421 PDGLSLVDVGYTDFDSQICFILND 445
           PDGLSLVDVGYT+FDSQICFILND
Sbjct: 421 PDGLSLVDVGYTEFDSQICFILND 444

[Close]

BLAST of CSPI01G04590 vs. NCBI nr
Match: gi|1009129371|ref|XP_015881730.1| (PREDICTED: tRNA pseudouridine synthase A [Ziziphus jujuba])

HSP 1 Score: 588.2 bits (1515), Expect = 1.2e-164
Identity = 299/439 (68.11%), Postives = 348/439 (79.27%), Query Frame = 1


Query: 9   LVSPSSAGFGLKILMENRAQR---KDYLHYNHTDRCRNARWTARESYQFMYGRPWQEVLD 68
           L+S S+     KI MEN  Q    K Y HYNHTD CR +RWTARESYQFMY RPW +VLD
Sbjct: 16  LLSNSNGNSITKIHMENFCQPPPDKVYFHYNHTDPCRFSRWTARESYQFMYARPWNQVLD 75

Query: 69  FYSHAVNGRFSLSSLLGTEICRDHDDAETPSIYNSAELNRAAVKDKTGRWARATFKIVLS 128
           FYS+ +N   SLS+L G E    H+ AE P+I  +AEL   + ++++GRWAR TFKIVLS
Sbjct: 76  FYSNLINANLSLSALFGPETYHVHNAAEIPNISETAELKSVSPENRSGRWARLTFKIVLS 135

Query: 129 YDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVT 188
           Y G SFDGWQKQPGLNTVQGLVE+SLGKFVDEKKAQ+LKDKCLPLEGCA+VAGRTDKGVT
Sbjct: 136 YHGGSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQVLKDKCLPLEGCAVVAGRTDKGVT 195

Query: 189 ALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILP 248
           AL+QVCSFYTWR D+K +DIE +INSAAPG LR  SVS+VSR+FHPNFSAKWRRYLYI P
Sbjct: 196 ALQQVCSFYTWRKDIKSEDIEVAINSAAPGTLRVKSVSEVSRVFHPNFSAKWRRYLYIFP 255

Query: 249 LNDGENMEPDSTTWENVEN-REEENFVKIEASNGEKCVDGIHDNLVLSPNDEELVSADKP 308
            NDGE+ +  S + E++E  R  E+  ++    GE   + +  NL+++ N EE+ S +KP
Sbjct: 256 FNDGEDGQQSSPSGEDIEQFRSNESGDELNNGCGESHYESV-QNLIINDN-EEIDSGNKP 315

Query: 309 QTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGV 368
           +TFS+ RVNQLL++LEGKLLSYKMFARDTKASRN GPPTECF+YHARA E RLPC +   
Sbjct: 316 KTFSVRRVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECFMYHARATEARLPCPDSIE 375

Query: 369 GRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGL 428
           GR VMCVELVANRFLRKMVRVLVAT+IREAAAGA EDALL+LMDATCRRATAPPAP DGL
Sbjct: 376 GRRVMCVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMDATCRRATAPPAPADGL 435

Query: 429 SLVDVGYTDFDSQICFILN 444
            LVDVGY +F+ Q   I N
Sbjct: 436 CLVDVGYAEFNPQNRLICN 452

[Close]

BLAST of CSPI01G04590 vs. NCBI nr
Match: gi|802707316|ref|XP_012084292.1| (PREDICTED: uncharacterized protein LOC105643709 [Jatropha curcas])

HSP 1 Score: 573.5 bits (1477), Expect = 3.1e-160
Identity = 282/416 (67.79%), Postives = 336/416 (80.77%), Query Frame = 1


Query: 26  RAQRKDYLHYNHTDRCRNARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLLGTEI 85
           +AQ K Y+HYNHTD C+  RWTARES+QFMY RPW+EV++FYS+ VNG  SLS L GT+I
Sbjct: 38  QAQNKVYVHYNHTDSCKFLRWTARESFQFMYARPWEEVVEFYSNVVNGHLSLSELFGTQI 97

Query: 86  CRDHDDAETPSIYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQG 145
              HD+A+    +  ++L   + KDK GRWAR TFKIVLSY G SFDGWQKQPGLNTVQG
Sbjct: 98  HFAHDNAKIQDSFVESKLEDFSDKDKFGRWARVTFKIVLSYHGASFDGWQKQPGLNTVQG 157

Query: 146 LVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDI 205
           LVERSLG FVDEKK+Q LKDKC PLEGCA+VAGRTDKGV+A +Q+CSFYTWR DV+P +I
Sbjct: 158 LVERSLGTFVDEKKSQQLKDKCKPLEGCAVVAGRTDKGVSAFQQICSFYTWRKDVRPHEI 217

Query: 206 EDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSTTWENVENR 265
           ED+INS+APGKLR  SVS+VSR FHPNFSAKWRRYLYI PLNDGEN E D   + + +  
Sbjct: 218 EDAINSSAPGKLRVVSVSEVSRAFHPNFSAKWRRYLYIFPLNDGENGE-DVENFSSHDKY 277

Query: 266 EEENFVKIEASNGEKCVDGIHDNLVLSPNDEELVSADKPQTFSITRVNQLLRKLEGKLLS 325
           +E+     E ++ EK    + ++ ++  ++ E     KP+TFS+ RVNQLL++LEGKLLS
Sbjct: 278 DEQRPGSGELTSKEK----LDESFIIDKDEPE--GTIKPRTFSVCRVNQLLQQLEGKLLS 337

Query: 326 YKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGVGRSVMCVELVANRFLRKMVRV 385
           YK+FARDTKASRNEGPPTECF+YHARA E RLPC + G GR V+C+ELVANRFLRKMVRV
Sbjct: 338 YKIFARDTKASRNEGPPTECFIYHARATEMRLPCSDHGQGRKVICIELVANRFLRKMVRV 397

Query: 386 LVATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICFI 442
           LVAT+IREAAAGA +DALL+LMDA+CRRA+APPAPPDGL LVDVGYT+FD Q C I
Sbjct: 398 LVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLVDVGYTEFDPQSCII 446

[Close]

BLAST of CSPI01G04590 vs. NCBI nr
Match: gi|255566350|ref|XP_002524161.1| (PREDICTED: tRNA pseudouridine synthase A isoform X1 [Ricinus communis])

HSP 1 Score: 570.5 bits (1469), Expect = 2.6e-159
Identity = 283/421 (67.22%), Postives = 332/421 (78.86%), Query Frame = 1


Query: 24  ENRAQRKDYLHYNHTDRCRNARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLLGT 83
           E + Q K Y HYNHTD C++ RWTARES+QFMY RPWQEV DFYS+ VNGR S   L  +
Sbjct: 26  ETKTQNKIYFHYNHTDSCKSFRWTARESFQFMYARPWQEVSDFYSNVVNGRLSFLELFRS 85

Query: 84  EICRDHDDAETPSIYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTV 143
           ++    DDA+     N  EL   + +D+ GRWAR  FKI LSY G SFDGWQKQPGLNTV
Sbjct: 86  QMHFVRDDAKIQEDSNKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTV 145

Query: 144 QGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQ 203
           QGLVE+SLGKFVDEKKAQ LK+ C PLEGCA+VAGRTDKGV+ALRQVCSFYTWR DV+P 
Sbjct: 146 QGLVEKSLGKFVDEKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVRPH 205

Query: 204 DIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEP--DSTTWEN 263
           +IED+INS+APGK+R  SVS+VSR+FHPNFSAKWRRYLYI P+NDGE+ E   DS   EN
Sbjct: 206 EIEDAINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQSFDSEDLEN 265

Query: 264 VENREEENFVKIEASNG-EKCVDGIHDNLVLSPNDEELVSADKPQTFSITRVNQLLRKLE 323
           + + E+ +    E  NG  +     H   +++ + +EL  A KP+ FSI RVNQLL++LE
Sbjct: 266 LRSYEKYD----EQRNGCAELTSEEHVEELITSDKDELEGAKKPRIFSICRVNQLLQQLE 325

Query: 324 GKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGVGRSVMCVELVANRFLR 383
           GKLLSYK+FARDTKASRN GPPTECF+YHARA E RLPC + G GR VMCVELVANRFLR
Sbjct: 326 GKLLSYKIFARDTKASRNVGPPTECFIYHARATEARLPCPDHGEGRKVMCVELVANRFLR 385

Query: 384 KMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICF 442
           KMVRVLVAT+IREAAAGA +DALL+LMDA+CRRA+APPAPPDGL L DVGYT+FD+QIC 
Sbjct: 386 KMVRVLVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLFDVGYTEFDAQICI 442

The following BLAST results are available for this feature:

BLAST of CSPI01G04590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRUA_LEPBA	5.7e-13	29.61	tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc ...	[more]
TRUA_LEPBP	5.7e-13	29.61	tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc ...	[more]
TRUA_DICT6	9.7e-13	32.54	tRNA pseudouridine synthase A OS=Dictyoglomus thermophilum (strain ATCC 35947 / ...	[more]
TRUA_BRAHW	2.2e-12	36.29	tRNA pseudouridine synthase A OS=Brachyspira hyodysenteriae (strain ATCC 49526 /...	[more]
TRUA_THESQ	2.8e-12	30.66	tRNA pseudouridine synthase A OS=Thermotoga sp. (strain RQ2) GN=truA PE=3 SV=1	[more]

BLAST of CSPI01G04590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV59_CUCSA	1.3e-258	99.32	tRNA pseudouridine synthase OS=Cucumis sativus GN=Csa_1G025830 PE=3 SV=1	[more]
A0A067JV59_JATCU	2.2e-160	67.79	tRNA pseudouridine synthase OS=Jatropha curcas GN=JCGZ_19781 PE=3 SV=1	[more]
B9SDU2_RICCO	1.8e-159	67.22	tRNA pseudouridine synthase OS=Ricinus communis GN=RCOM_1712560 PE=3 SV=1	[more]
W9S3H9_9ROSA	5.3e-159	67.76	tRNA pseudouridine synthase OS=Morus notabilis GN=L484_008208 PE=3 SV=1	[more]
A0A061GRT3_THECC	1.2e-155	66.43	tRNA pseudouridine synthase OS=Theobroma cacao GN=TCM_039779 PE=3 SV=1	[more]

BLAST of CSPI01G04590 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35400.2	1.9e-107	55.25	Pseudouridine synthase family protein	[more]
AT1G20370.1	4.1e-09	30.15	Pseudouridine synthase family protein	[more]
AT1G76120.1	2.6e-08	31.20	Pseudouridine synthase family protein	[more]

BLAST of CSPI01G04590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439176\|ref\|XP_004137363.1\|	1.9e-258	99.32	PREDICTED: uncharacterized protein LOC101205562 [Cucumis sativus]	[more]
gi\|659107096\|ref\|XP_008453520.1\|	2.7e-249	96.17	PREDICTED: uncharacterized protein LOC103494203 [Cucumis melo]	[more]
gi\|1009129371\|ref\|XP_015881730.1\|	1.2e-164	68.11	PREDICTED: tRNA pseudouridine synthase A [Ziziphus jujuba]	[more]
gi\|802707316\|ref\|XP_012084292.1\|	3.1e-160	67.79	PREDICTED: uncharacterized protein LOC105643709 [Jatropha curcas]	[more]
gi\|255566350\|ref\|XP_002524161.1\|	2.6e-159	67.22	PREDICTED: tRNA pseudouridine synthase A isoform X1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001406	PsdUridine_synth_TruA
IPR020094	Pseudouridine synthase I, TruA, N-terminal
IPR020095	PsdUridine_synth_TruA_C
IPR020097	PsdUridine_synth_TruA_a/b_dom
IPR020103	PsdUridine_synth_cat_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0001522	pseudouridine synthesis
GO:0009451	RNA modification

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0009982	pseudouridine synthase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0008033	tRNA processing
biological_process	GO:0009451	RNA modification
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G04590.1	CSPI01G04590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001406	Pseudouridine synthase I, TruA	HAMAP	MF_00171	TruA	coord: 118..431 score: 2
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 303..441 score: 1.0E-192coord: 70..265 score: 1.0E
IPR020094	Pseudouridine synthase I, TruA, N-terminal	GENE3D	G3DSA:3.30.70.580		coord: 119..235 score: 9.0
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	G3DSA:3.30.70.660		coord: 236..264 score: 9.4E-23coord: 307..433 score: 9.4
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 340..431 score: 8.
IPR020103	Pseudouridine synthase, catalytic domain	unknown	SSF55120	Pseudouridine synthase	coord: 119..259 score: 4.03E-46coord: 302..439 score: 4.03
None	No IPR available	PANTHER	PTHR11142:SF10	TRNA PSEUDOURIDINE SYNTHASE	coord: 303..441 score: 1.0E-192coord: 70..265 score: 1.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G04590	Cla018900	Watermelon (97103) v1	cpiwmB100
CSPI01G04590	Csa1G025830	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G04590	MELO3C017384	Melon (DHL92) v3.5.1	cpimeB056
CSPI01G04590	ClCG06G014090	Watermelon (Charleston Gray)	cpiwcgB084
CSPI01G04590	Lsi06G012560	Bottle gourd (USVL1VR-Ls)	cpilsiB071
CSPI01G04590	MELO3C017384.2	Melon (DHL92) v3.6.1	cpimedB050
CSPI01G04590	CsaV3_1G004580	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G04590	Cla97C06G123540	Watermelon (97103) v2	cpiwmbB080
CSPI01G04590	Bhi02G000128	Wax gourd	cpiwgoB079
CSPI01G04590	Cucsa.111790	Cucumber (Gy14) v1	cgycpiB137
CSPI01G04590	CmaCh11G003290	Cucurbita maxima (Rimu)	cmacpiB086
CSPI01G04590	CmaCh10G003430	Cucurbita maxima (Rimu)	cmacpiB051
CSPI01G04590	CmoCh11G003350	Cucurbita moschata (Rifu)	cmocpiB079
CSPI01G04590	CmoCh10G003720	Cucurbita moschata (Rifu)	cmocpiB042
CSPI01G04590	Cp4.1LG18g06710	Cucurbita pepo (Zucchini)	cpecpiB363
CSPI01G04590	CsGy1G004490	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G04590	Carg15191	Silver-seed gourd	carcpiB0821

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G04590	Silver-seed gourd	carcpiB0628
CSPI01G04590	Cucurbita pepo (Zucchini)	cpecpiB657