CmaCh11G000230 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAGCAAAAAGTCGAAGACAGCTACAACTTCCGTCTCTATTGTTGATTTGAAGTCCATCATTCATCAGTATGCAATGTTCTTCGACAAGTTAGTGGAGCTCATCCCTGCAAGATTCTACTTACCTAATGACGAAAACGACAAACCTTGGTTTCAGGGCCTTAGCAACACTGAGAAGGCTTTGGCTAAGAAGGAATCAAAGGAAAATCTTAAGAAAGCTCGAAGAGATCGAATGGACCCTGAAAAGTCAGCTAGATCAACCCTTGATTTGCTGAAGCAAAACTTGGAAAAGAAAAAGTTAGAAGATGAAAGCGATGATAATGAAATGGATGTTAAGCCAGTAACGTCTGGGTTGGATGGTGATGTTCAATCAGTTACATATGAAGAGCTTCGACAACGTCTTCATCGAAAGATTGAAGAGTTCCGAGCAAATAGAAATACAGGATGTTCGAATAGGGAAAAGAAGAGGAATGAAAGAAATGAGAGGAGGGAACTTATTCAGAAGAAACGCAAGAGAGGACATGGTCCTGAGGAAAAGAAATTAGCAGGCCACCACTCAAGAGATGAAGTGGAGAAGAATGTAGATGAAGCCTCTAAAGAACTTGCATTTAGTCATGTCAAACTCGGGACTGAAGAAGAGCATGGGAAGAAAAAGAAGAGAAAGCTCTCCAAGTTGGAGGAGCTTGAAAGAGCTAAAAAATTAGACGAAGCAAAGAGAGATCCTGAGAAAGGCGAGATAATCTCAAAGAAGCATTCTTGGAAAGCAGCCACAAGTAGAGCTGCGGGGGCTAAGGTCCACGATGATCCAAAACTCCTGATGAAGAGCTTAAAGAAGGAAAAGAAACAGCAGCTGAAGAATGTCGAGAAATGGAAGGATAGGATTGAAACAACCCAGAAGATGAAAGCAGAAAGACAACAAAAGAGGTCAGAAAACATTTCACAGAAAATTCACGATAAGAAGATGCGGCGAATTGCAAAGAGGGAGAAGAAACTTGTGCGTCCTGGCTTTGAAGGTCGCAAAGAAGGTTTCATCAACGGAAGCACCCCATAAAGTGAAAGCAGGTTTTGTTTTACCTTTGAAATGCAGTTGCTGCCCTGTTTTTCCTTAGTAGCTTTAACATATTTGTGTTTCTTTCTCAGTGAAAACAATAGAGAATGAAAAACAATAAATTGTTTTAAACCACGTCTCTTGTTCTTCGCTTGAAGGAAAAAAAGAGCCATACAATGTCTTGAGTAATATTTGTCCCACCGTAAATGATAATCTTAAAATACTTTCGGAACTACTAAGCAAATAGAATTAAGGTATAGAAATTTGTTAGGTAAATAAATACACATTGAATGGAGGAGGCAAGGGAGCGTACACATTGAATGGAGGAGGCAAGGGAGCGTAGGGGTTGATAAGGACCCTAATCCCCAAGAACTTTAAATTAATTAACACCTCGTGTGAAATTCGGACAACCAATAGATAAAGCTAGAATTAGATTATCTCGATCGAAAGATGACACAGAGATAAAGCTAGAATTAGATTACCAGCTAGATTTGTAACTTTGTTCTAAAAATTGAGTCACTCCACAAGAATTGATTGAAACATAAAAATGGCAAATATGATGCTCGGATTTCTAAGAGAAACGTCTTTTAATTTGAGATCTGAATTACATTCATCAACGAATCTGTTTTTTACCTAACATATTTCCGACAGAAGACGTTTGTGGTCCGAATTCAATCCCAATATGTTTGTGGCCGGGATTTATTCCCGATCCCCTTTAATCTACACAAAGAATAAGTCAAATTTACATAATTTATGAAATTAAACATAGATTTTTTCTAACAAATGTTATGTGCTTGAGTGGTTAATGCTACGGACTTGAAATTAATTGAGCTAATTGTGTTGTTGTTGACATATTTTTTTGAATCTTTTTTGCAATTGGTCCATTTTGAAGAAGGATTCTTTCTAATCAGAAAAAATTGTTACCTCCTTGGCGATTGGTCCATTTTCAGAAGGATTAGTCTCTAATCAGAAAAAATTATCACCTCCTTTTGAAAGTGTCCACGTGATTCTTATCATCTTCCCCCTCTTCAAAAGGATTCGTCTCTAATCATAAAAGATCATCATCTTCTTTTAGTCACCTCTTTTTGAAATTGTCCATTTGGAACACCGTGATTCTTATCAAAAGTAAGTCCGAAACATATAAAATGTTGTTAATCCTGAACAGGCTATTATTGCGAAATTCGGTGAATACAACCAACTATCATTAAGAATTTCATCTTTGGACCAAAAACAGGCAAGGGGTGAAATACCACAAAGAGAAAGGGTACCTAATAAAAAAGCGTTTTTTGTAATTGGCACATGCTTTGTTAAACTCCATAAGAACCATATTCTGACTTCGATCAATTGGTGTTACGACATAGCAGTGGATAAGTTCACCGACCAGGACCAGCGGGAAAAGAAGGAACACGTGAATTAAGATGGGGTAATCAAAGTTTTAAGTTTTAACTGAACAATAATATTTCAACGAATTGGTGCTAAATTCAAAGACGCGAGGAAGGAAGAATTATTCGACGATGAGCAGTGGTTGGCTTACTGGATCATCTATTCCTTTCTCACTCTCATGGAGATGGTTGTTCTGCAACCTTTGTTAGAGTGGTCAGTGGAAATTCTAGATTCCCCCCTTTTTGTTTTGAATAACATGGTTTTAATTCGTGGCTGAAAGAACAGTGACAGCTTCATTATTTGCGTTGCAGGATAGCAGTTTGGTATTGGGTGAAATTGGTATTTGGGGCATGGCCGGTTCTGCCACAGCTCAAAGGTGCAGCTTTCTTGTATGAAAGATTCGTGAGGCAGCAGATTAAGAAACATGGTTTGGGAAGCAATTCTCCTGATGCGTTGATTCACTAA ATGAAAAGCAAAAAGTCGAAGACAGCTACAACTTCCGTCTCTATTGTTGATTTGAAGTCCATCATTCATCAGTATGCAATGTTCTTCGACAAGTTAGTGGAGCTCATCCCTGCAAGATTCTACTTACCTAATGACGAAAACGACAAACCTTGGTTTCAGGGCCTTAGCAACACTGAGAAGGCTTTGGCTAAGAAGGAATCAAAGGAAAATCTTAAGAAAGCTCGAAGAGATCGAATGGACCCTGAAAAGTCAGCTAGATCAACCCTTGATTTGCTGAAGCAAAACTTGGAAAAGAAAAAGTTAGAAGATGAAAGCGATGATAATGAAATGGATGTTAAGCCAGTAACGTCTGGGTTGGATGGTGATGTTCAATCAGTTACATATGAAGAGCTTCGACAACGTCTTCATCGAAAGATTGAAGAGTTCCGAGCAAATAGAAATACAGGATGTTCGAATAGGGAAAAGAAGAGGAATGAAAGAAATGAGAGGAGGGAACTTATTCAGAAGAAACGCAAGAGAGGACATGGTCCTGAGGAAAAGAAATTAGCAGGCCACCACTCAAGAGATGAAGTGGAGAAGAATGTAGATGAAGCCTCTAAAGAACTTGCATTTAGTCATGTCAAACTCGGGACTGAAGAAGAGCATGGGAAGAAAAAGAAGAGAAAGCTCTCCAAGTTGGAGGAGCTTGAAAGAGCTAAAAAATTAGACGAAGCAAAGAGAGATCCTGAGAAAGGCGAGATAATCTCAAAGAAGCATTCTTGGAAAGCAGCCACAAGTAGAGCTGCGGGGGCTAAGGTCCACGATGATCCAAAACTCCTGATGAAGAGCTTAAAGAAGGAAAAGAAACAGCAGCTGAAGAATGTCGAGAAATGGAAGGATAGGATTGAAACAACCCAGAAGATGAAAGCAGAAAGACAACAAAAGAGGTCAGAAAACATTTCACAGAAAATTCACGATAAGAAGATGCGGCGAATTGCAAAGAGGGAGAAGAAACTTGTGCGTCCTGGCTTTGAAGGTCGCAAAGAAGACGCGAGGAAGGAAGAATTATTCGACGATGAGCAGTGGTTGGCTTACTGGATCATCTATTCCTTTCTCACTCTCATGGAGATGGTTGTTCTGCAACCTTTGTTAGAGTGGATAGCAGTTTGGTATTGGGTGAAATTGGTATTTGGGGCATGGCCGGTTCTGCCACAGCTCAAAGGTGCAGCTTTCTTGTATGAAAGATTCGTGAGGCAGCAGATTAAGAAACATGGTTTGGGAAGCAATTCTCCTGATGCGTTGATTCACTAA ATGAAAAGCAAAAAGTCGAAGACAGCTACAACTTCCGTCTCTATTGTTGATTTGAAGTCCATCATTCATCAGTATGCAATGTTCTTCGACAAGTTAGTGGAGCTCATCCCTGCAAGATTCTACTTACCTAATGACGAAAACGACAAACCTTGGTTTCAGGGCCTTAGCAACACTGAGAAGGCTTTGGCTAAGAAGGAATCAAAGGAAAATCTTAAGAAAGCTCGAAGAGATCGAATGGACCCTGAAAAGTCAGCTAGATCAACCCTTGATTTGCTGAAGCAAAACTTGGAAAAGAAAAAGTTAGAAGATGAAAGCGATGATAATGAAATGGATGTTAAGCCAGTAACGTCTGGGTTGGATGGTGATGTTCAATCAGTTACATATGAAGAGCTTCGACAACGTCTTCATCGAAAGATTGAAGAGTTCCGAGCAAATAGAAATACAGGATGTTCGAATAGGGAAAAGAAGAGGAATGAAAGAAATGAGAGGAGGGAACTTATTCAGAAGAAACGCAAGAGAGGACATGGTCCTGAGGAAAAGAAATTAGCAGGCCACCACTCAAGAGATGAAGTGGAGAAGAATGTAGATGAAGCCTCTAAAGAACTTGCATTTAGTCATGTCAAACTCGGGACTGAAGAAGAGCATGGGAAGAAAAAGAAGAGAAAGCTCTCCAAGTTGGAGGAGCTTGAAAGAGCTAAAAAATTAGACGAAGCAAAGAGAGATCCTGAGAAAGGCGAGATAATCTCAAAGAAGCATTCTTGGAAAGCAGCCACAAGTAGAGCTGCGGGGGCTAAGGTCCACGATGATCCAAAACTCCTGATGAAGAGCTTAAAGAAGGAAAAGAAACAGCAGCTGAAGAATGTCGAGAAATGGAAGGATAGGATTGAAACAACCCAGAAGATGAAAGCAGAAAGACAACAAAAGAGGTCAGAAAACATTTCACAGAAAATTCACGATAAGAAGATGCGGCGAATTGCAAAGAGGGAGAAGAAACTTGTGCGTCCTGGCTTTGAAGGTCGCAAAGAAGACGCGAGGAAGGAAGAATTATTCGACGATGAGCAGTGGTTGGCTTACTGGATCATCTATTCCTTTCTCACTCTCATGGAGATGGTTGTTCTGCAACCTTTGTTAGAGTGGATAGCAGTTTGGTATTGGGTGAAATTGGTATTTGGGGCATGGCCGGTTCTGCCACAGCTCAAAGGTGCAGCTTTCTTGTATGAAAGATTCGTGAGGCAGCAGATTAAGAAACATGGTTTGGGAAGCAATTCTCCTGATGCGTTGATTCACTAA MKSKKSKTATTSVSIVDLKSIIHQYAMFFDKLVELIPARFYLPNDENDKPWFQGLSNTEKALAKKESKENLKKARRDRMDPEKSARSTLDLLKQNLEKKKLEDESDDNEMDVKPVTSGLDGDVQSVTYEELRQRLHRKIEEFRANRNTGCSNREKKRNERNERRELIQKKRKRGHGPEEKKLAGHHSRDEVEKNVDEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAKRDPEKGEIISKKHSWKAATSRAAGAKVHDDPKLLMKSLKKEKKQQLKNVEKWKDRIETTQKMKAERQQKRSENISQKIHDKKMRRIAKREKKLVRPGFEGRKEDARKEELFDDEQWLAYWIIYSFLTLMEMVVLQPLLEWIAVWYWVKLVFGAWPVLPQLKGAAFLYERFVRQQIKKHGLGSNSPDALIH
BLAST of CmaCh11G000230 vs. Swiss-Prot
Match: HA22D_ARATH (HVA22-like protein d OS=Arabidopsis thaliana GN=HVA22D PE=2 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.9e-21 Identity = 49/69 (71.01%), Postives = 58/69 (84.06%), Query Frame = 1
BLAST of CmaCh11G000230 vs. Swiss-Prot
Match: HA22E_ARATH (HVA22-like protein e OS=Arabidopsis thaliana GN=HVA22E PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.2e-20 Identity = 47/69 (68.12%), Postives = 57/69 (82.61%), Query Frame = 1
BLAST of CmaCh11G000230 vs. Swiss-Prot
Match: HVA22_HORVU (Protein HVA22 OS=Hordeum vulgare GN=HVA22 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.3e-19 Identity = 45/76 (59.21%), Postives = 61/76 (80.26%), Query Frame = 1
BLAST of CmaCh11G000230 vs. Swiss-Prot
Match: HA22F_ARATH (HVA22-like protein f OS=Arabidopsis thaliana GN=HVA22F PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.7e-12 Identity = 45/110 (40.91%), Postives = 60/110 (54.55%), Query Frame = 1
BLAST of CmaCh11G000230 vs. Swiss-Prot
Match: HA22A_ARATH (HVA22-like protein a OS=Arabidopsis thaliana GN=HVA22A PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 7.9e-12 Identity = 30/61 (49.18%), Postives = 45/61 (73.77%), Query Frame = 1
BLAST of CmaCh11G000230 vs. TrEMBL
Match: A0A0A0LNJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G001420 PE=4 SV=1) HSP 1 Score: 493.4 bits (1269), Expect = 2.7e-136 Identity = 279/342 (81.58%), Postives = 308/342 (90.06%), Query Frame = 1
BLAST of CmaCh11G000230 vs. TrEMBL
Match: A0A0A0LKJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G169780 PE=4 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 4.2e-129 Identity = 264/342 (77.19%), Postives = 298/342 (87.13%), Query Frame = 1
BLAST of CmaCh11G000230 vs. TrEMBL
Match: A0A061EN28_THECC (Caldesmon, putative OS=Theobroma cacao GN=TCM_021036 PE=4 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 7.5e-110 Identity = 230/343 (67.06%), Postives = 281/343 (81.92%), Query Frame = 1
BLAST of CmaCh11G000230 vs. TrEMBL
Match: B9RJ85_RICCO (Caldesmon, putative OS=Ricinus communis GN=RCOM_1032260 PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 3.0e-106 Identity = 226/344 (65.70%), Postives = 279/344 (81.10%), Query Frame = 1
BLAST of CmaCh11G000230 vs. TrEMBL
Match: M5XBN7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008043mg PE=4 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 8.6e-106 Identity = 236/346 (68.21%), Postives = 279/346 (80.64%), Query Frame = 1
BLAST of CmaCh11G000230 vs. TAIR10
Match: AT5G05210.1 (AT5G05210.1 Surfeit locus protein 6) HSP 1 Score: 236.5 bits (602), Expect = 3.1e-62 Identity = 178/378 (47.09%), Postives = 229/378 (60.58%), Query Frame = 1
BLAST of CmaCh11G000230 vs. TAIR10
Match: AT2G27750.1 (AT2G27750.1 Surfeit locus protein 6) HSP 1 Score: 140.2 bits (352), Expect = 3.0e-33 Identity = 81/152 (53.29%), Postives = 113/152 (74.34%), Query Frame = 1
BLAST of CmaCh11G000230 vs. TAIR10
Match: AT4G24960.1 (AT4G24960.1 HVA22 homologue D) HSP 1 Score: 105.1 bits (261), Expect = 1.1e-22 Identity = 49/69 (71.01%), Postives = 58/69 (84.06%), Query Frame = 1
BLAST of CmaCh11G000230 vs. TAIR10
Match: AT5G50720.1 (AT5G50720.1 HVA22 homologue E) HSP 1 Score: 102.4 bits (254), Expect = 6.9e-22 Identity = 47/69 (68.12%), Postives = 57/69 (82.61%), Query Frame = 1
BLAST of CmaCh11G000230 vs. TAIR10
Match: AT2G42820.1 (AT2G42820.1 HVA22-like protein F) HSP 1 Score: 74.7 bits (182), Expect = 1.5e-13 Identity = 45/110 (40.91%), Postives = 60/110 (54.55%), Query Frame = 1
BLAST of CmaCh11G000230 vs. NCBI nr
Match: gi|659128866|ref|XP_008464410.1| (PREDICTED: ribosomal RNA-processing protein 14-C [Cucumis melo]) HSP 1 Score: 502.3 bits (1292), Expect = 8.5e-139 Identity = 284/342 (83.04%), Postives = 310/342 (90.64%), Query Frame = 1
BLAST of CmaCh11G000230 vs. NCBI nr
Match: gi|449440532|ref|XP_004138038.1| (PREDICTED: ribosomal RNA-processing protein 14-C [Cucumis sativus]) HSP 1 Score: 493.4 bits (1269), Expect = 3.9e-136 Identity = 279/342 (81.58%), Postives = 308/342 (90.06%), Query Frame = 1
BLAST of CmaCh11G000230 vs. NCBI nr
Match: gi|659121512|ref|XP_008460697.1| (PREDICTED: surfeit locus protein 6 homolog [Cucumis melo]) HSP 1 Score: 474.2 bits (1219), Expect = 2.5e-130 Identity = 268/341 (78.59%), Postives = 297/341 (87.10%), Query Frame = 1
BLAST of CmaCh11G000230 vs. NCBI nr
Match: gi|449458870|ref|XP_004147169.1| (PREDICTED: surfeit locus protein 6-like [Cucumis sativus]) HSP 1 Score: 469.5 bits (1207), Expect = 6.1e-129 Identity = 264/342 (77.19%), Postives = 298/342 (87.13%), Query Frame = 1
BLAST of CmaCh11G000230 vs. NCBI nr
Match: gi|590660105|ref|XP_007035310.1| (Caldesmon, putative [Theobroma cacao]) HSP 1 Score: 405.6 bits (1041), Expect = 1.1e-109 Identity = 230/343 (67.06%), Postives = 281/343 (81.92%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |