CmaCh10G000490 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh10G000490
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	HVA22-like protein
Location	Cma_Chr10 : 180893 .. 182957 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGGAAGGCAGCTCAGGCCATTAATATGAATAAGTTATGCTAATTGATGTTTTAGGTTAATAATCTCATTGATTAATGGGCGAGAGAGAGAGGCTTGGGCGTATTAATAATGGAAGGGCGGTGCTAAATTAACAGGCACGCCTTGAAGGAAGAATTAGATGCTGTCTCTATTGCTGCCACGTGTTAGTCCTTTTCAGGTCTTATAAAAATCTTTCCTCTTCCTCTTGCCCAATCACCACTACAATTCCCATTTCCGGAGTTCGTTCTTGTAGTTTTCCGCCTCCTCCTCCTCTATTTCTTCCCGAACAGAGAAAACAGCCCCCGATTTCGTGTAGAAAATGAGTAGATTTTGGACGTTGGTCACCCAACTTCATATTCTTTCTGGGTGAGTATAAACGGAACGCCTTCCTAACTTGGATGTTGGTTTTGTATCTTAGGGCTAATTAGTTTGTAATTTTCGCTGTTGATGATTCCCGCAGGCCGGTTTTGATGTTGCTGTATCCACTGTAAGTTCATCTCTCTCTCTCTCTCTCTCTCTTTCTCCGTGTGATGCTGTGTTTATATGTTGTCTCGATTTGATTTGAATCGTTCGCAAAACAACAGTTATGCGTCGGTGGTAGCCATCGAAAGCACATCCAAATTGGACGATGAGCAGTGGTTGGCTTATTGGATCATCTACTCCTTTCTTACTCTCATGGAAATGGTTCTTCAGCCTGTACTAGAGTGGTCAGTGCTAGCTCTAGATGATTTCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTTTCCCCCCCCCCCCCCCTTTTCTTTTCTTTTCAGTTACAAGATTTACTGAGGTTGAGAGATCGGATGGGGTTTTTGGTCGTTACTTAAATATATACGTTAAAAAACTGAGGGAGTTTTTGAAATTTTCAGGATACCAGTTTGGTATTCGGTGAAATTAGTATTTGTGGCGTGGCTGGTTCTGCCACAGTTCAAAGGTGCAGCTTTCTTGTATGATAGATTCGTGAGGCAGCAAATAAAGAAATATGGTGGTAGGGGAAGCAATTCTGCTGATGCGAAGGCCAAGAATCACTAATTCACATAACTATAGTGAGTCCCCCCCTTGTTTTTTAATAATTATGATTACACTCGCCATTGTGAGCTAATTTCACTCATCTTTTTGTAAAGAAGTTCAAGTGCACTAGTAAGATGTCTGTTCTTGTGTCCTTATGTGAACTGGATTGGGAAGGATGGGGGCAGGAATCTTGATGAAGAAGGCTATTGTAAAGAAGAGTTGGTTGCTTCGTGGTGGACCATCCTTGTGGATTTGACTTCTTCTGTCTTTTGTTTTCGTATGGTTATGTAAAAAAAGAACTTGTATTGGGCATATTTGTAAATGAAGCAACTCTTTTTTCCCCCTGGTTTTATAAAGCTTCTGTTCACACGGCTATACAACAACTCTTTTAAACTATATTCACACTCTCAAATGAAC

mRNA sequence

CGGGGAAGGCAGCTCAGGCCATTAATATGAATAAGTTATGCTAATTGATGTTTTAGGTTAATAATCTCATTGATTAATGGGCGAGAGAGAGAGGCTTGGGCGTATTAATAATGGAAGGGCGGTGCTAAATTAACAGGCACGCCTTGAAGGAAGAATTAGATGCTGTCTCTATTGCTGCCACGTGTTAGTCCTTTTCAGGTCTTATAAAAATCTTTCCTCTTCCTCTTGCCCAATCACCACTACAATTCCCATTTCCGGAGTTCGTTCTTGTAGTTTTCCGCCTCCTCCTCCTCTATTTCTTCCCGAACAGAGAAAACAGCCCCCGATTTCGTGTAGAAAATGAGTAGATTTTGGACGTTGGTCACCCAACTTCATATTCTTTCTGGGCCGGTTTTGATGTTGCTGTATCCACTTTATGCGTCGGTGGTAGCCATCGAAAGCACATCCAAATTGGACGATGAGCAGTGGTTGGCTTATTGGATCATCTACTCCTTTCTTACTCTCATGGAAATGGTTCTTCAGCCTGTACTAGAGTGGATACCAGTTTGGTATTCGGTGAAATTAGTATTTGTGGCGTGGCTGGTTCTGCCACAGTTCAAAGGTGCAGCTTTCTTGTATGATAGATTCGTGAGGCAGCAAATAAAGAAATATGGTGGTAGGGGAAGCAATTCTGCTGATGCGAAGGCCAAGAATCACTAATTCACATAACTATAAAGTTCAAGTGCACTAGTAAGATGTCTGTTCTTGTGTCCTTATGTGAACTGGATTGGGAAGGATGGGGGCAGGAATCTTGATGAAGAAGGCTATTGTAAAGAAGAGTTGGTTGCTTCGTGGTGGACCATCCTTGTGGATTTGACTTCTTCTGTCTTTTGTTTTCGTATGGTTATGTAAAAAAAGAACTTGTATTGGGCATATTTGTAAATGAAGCAACTCTTTTTTCCCCCTGGTTTTATAAAGCTTCTGTTCACACGGCTATACAACAACTCTTTTAAACTATATTCACACTCTCAAATGAAC

Coding sequence (CDS)

ATGAGTAGATTTTGGACGTTGGTCACCCAACTTCATATTCTTTCTGGGCCGGTTTTGATGTTGCTGTATCCACTTTATGCGTCGGTGGTAGCCATCGAAAGCACATCCAAATTGGACGATGAGCAGTGGTTGGCTTATTGGATCATCTACTCCTTTCTTACTCTCATGGAAATGGTTCTTCAGCCTGTACTAGAGTGGATACCAGTTTGGTATTCGGTGAAATTAGTATTTGTGGCGTGGCTGGTTCTGCCACAGTTCAAAGGTGCAGCTTTCTTGTATGATAGATTCGTGAGGCAGCAAATAAAGAAATATGGTGGTAGGGGAAGCAATTCTGCTGATGCGAAGGCCAAGAATCACTAA

Protein sequence

MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVLQPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGRGSNSADAKAKNH

Homology

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BLAST of CmaCh10G000490 vs. Swiss-Prot
Match: HA22E_ARATH (HVA22-like protein e OS=Arabidopsis thaliana GN=HVA22E PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 8.6e-41
Identity = 76/105 (72.38%), Postives = 95/105 (90.48%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M++ WT ++ LH L+GPV+MLLYPLYASV+AIES SK+DDEQWLAYWI+YSFLTL E++L
Sbjct: 1   MTKLWTSLSALHSLAGPVVMLLYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELIL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYG 106
           Q +LEWIP+WY+ KLVFVAWLVLPQF+GAAF+Y++ VR+Q KKYG
Sbjct: 61  QSLLEWIPIWYTAKLVFVAWLVLPQFRGAAFIYNKVVREQFKKYG 105

[Close]

BLAST of CmaCh10G000490 vs. Swiss-Prot
Match: HA22D_ARATH (HVA22-like protein d OS=Arabidopsis thaliana GN=HVA22D PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.1e-40
Identity = 75/105 (71.43%), Postives = 96/105 (91.43%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M +FWT +T LH  +GP++MLLYPLYASV+A+EST+K+DDEQWLAYWIIYSFL+L E++L
Sbjct: 1   MDKFWTFLTALHSGAGPIVMLLYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELIL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYG 106
           Q ++EWIP+WY+VKLVFVAWLVLPQF+GAAF+Y+R VR+Q KK+G
Sbjct: 61  QSLIEWIPIWYTVKLVFVAWLVLPQFQGAAFIYNRVVREQFKKHG 105

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BLAST of CmaCh10G000490 vs. Swiss-Prot
Match: HVA22_HORVU (Protein HVA22 OS=Hordeum vulgare GN=HVA22 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 9.5e-40
Identity = 79/119 (66.39%), Postives = 97/119 (81.51%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M + W L+T LH ++GP + LLYPLYASV A+ES SK+DDEQWLAYWI+YSF+TL+EMV 
Sbjct: 1   MGKSWALLTHLHSVAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVA 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGRGSNSADAKAKNH 120
           +PVL WIPVWY VKL+FVAWL LPQFKGA+F+YD+ VR+Q++KY GR  N  DA  K H
Sbjct: 61  EPVLYWIPVWYPVKLLFVAWLALPQFKGASFIYDKVVREQLRKYRGRNRN-GDADHKVH 118

[Close]

BLAST of CmaCh10G000490 vs. Swiss-Prot
Match: HA22A_ARATH (HVA22-like protein a OS=Arabidopsis thaliana GN=HVA22A PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 7.3e-24
Identity = 48/92 (52.17%), Postives = 69/92 (75.00%), Query Frame = 1


Query: 7   LVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVLQPVLEW 66
           L+    +L+GPV+ L+YPLYASV AIE+ S  DD+QWL YW++YS LTL+E+    ++EW
Sbjct: 12  LLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIELTFAKLIEW 71

Query: 67  IPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVR 99
           +P+W  +KL+   WLV+P F GAA++Y+ FVR
Sbjct: 72  LPIWSYMKLILTCWLVIPYFSGAAYVYEHFVR 103

[Close]

BLAST of CmaCh10G000490 vs. Swiss-Prot
Match: HA22F_ARATH (HVA22-like protein f OS=Arabidopsis thaliana GN=HVA22F PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 7.3e-24
Identity = 57/106 (53.77%), Postives = 73/106 (68.87%), Query Frame = 1


Query: 14  LSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVLQPVLEWIPVWYSV 73
           L GP +MLLYPLYAS  AIES + LDD+QWL YWIIYS +T+ E+ +  VL W+P W  +
Sbjct: 14  LVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWRVLAWLPFWPYL 73

Query: 74  KLVFVAWLVLPQFKGAAFLYDRFVRQQIK--KYGGRGSNSADAKAK 118
           KL+F  WLVLP F GAA++Y  FVRQ +K     G G+N  D + +
Sbjct: 74  KLLFCMWLVLPMFSGAAYIYSNFVRQYVKIGMNVGGGTNYTDEQRR 119

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BLAST of CmaCh10G000490 vs. TrEMBL
Match: A0A0A0LR70_CUCSA (HVA22-like protein OS=Cucumis sativus GN=Csa_1G001410 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.5e-52
Identity = 107/119 (89.92%), Postives = 110/119 (92.44%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MS+FWTL TQLH LSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MSKFWTLATQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGRGSNSADAKAKNH 120
           QPVLEWIP+WYSVKLVFVAWLVLPQFKGAAFLY+RF R  IKKY G G NSADAK KNH
Sbjct: 61  QPVLEWIPIWYSVKLVFVAWLVLPQFKGAAFLYERFARPHIKKY-GVGGNSADAKPKNH 118

[Close]

BLAST of CmaCh10G000490 vs. TrEMBL
Match: W9QCA6_9ROSA (HVA22-like protein OS=Morus notabilis GN=L484_010130 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-42
Identity = 89/120 (74.17%), Postives = 103/120 (85.83%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M +F T +TQ+H L+GP L LLYPLYAS+VAIESTSKLDDEQWLAYWI+YSFLTL+EMV+
Sbjct: 1   MGKFGTFLTQVHSLAGPSLTLLYPLYASIVAIESTSKLDDEQWLAYWILYSFLTLVEMVI 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGRGSN--SADAKAKN 119
           QP L+WIP+WY VKLVFVAWLVLPQFKGAAFLY+RFVR+ IKKY G G +  S + K KN
Sbjct: 61  QPALDWIPIWYDVKLVFVAWLVLPQFKGAAFLYERFVRENIKKYKGHGPHHKSPNGKGKN 120

[Close]

BLAST of CmaCh10G000490 vs. TrEMBL
Match: V4TJZ1_9ROSI (HVA22-like protein OS=Citrus clementina GN=CICLE_v10033011mg PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.9e-42
Identity = 86/106 (81.13%), Postives = 97/106 (91.51%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MSRFW L+  +H L+GPVLMLLYPLYASVVAIES SK+DDEQWLAYWI+YSFLTL EMVL
Sbjct: 1   MSRFWNLIYGVHSLAGPVLMLLYPLYASVVAIESPSKVDDEQWLAYWILYSFLTLTEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGG 107
           QPVLEWIP+WYSVKLV  AWLVLPQF+GAAF+Y+RFVRQQI++Y G
Sbjct: 61  QPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVRQQIRQYRG 106

[Close]

BLAST of CmaCh10G000490 vs. TrEMBL
Match: A0A067FMK6_CITSI (HVA22-like protein OS=Citrus sinensis GN=CISIN_1g032264mg PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.9e-42
Identity = 86/106 (81.13%), Postives = 97/106 (91.51%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MSRFW L+  +H L+GPVLMLLYPLYASVVAIES SK+DDEQWLAYWI+YSFLTL EMVL
Sbjct: 1   MSRFWNLIYGVHSLAGPVLMLLYPLYASVVAIESPSKVDDEQWLAYWILYSFLTLTEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGG 107
           QPVLEWIP+WYSVKLV  AWLVLPQF+GAAF+Y+RFVRQQI++Y G
Sbjct: 61  QPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVRQQIRQYRG 106

[Close]

BLAST of CmaCh10G000490 vs. TrEMBL
Match: D7SH16_VITVI (HVA22-like protein OS=Vitis vinifera GN=VIT_17s0000g01080 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.2e-42
Identity = 85/119 (71.43%), Postives = 101/119 (84.87%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M R WTL T LH L+GPV MLLYPLYASV+AIEST+K+DDEQWLAYWI+YSFLTLMEM+L
Sbjct: 1   MGRLWTLATHLHSLAGPVTMLLYPLYASVMAIESTTKVDDEQWLAYWILYSFLTLMEMLL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGRGSNSADAKAKNH 120
           QP+L+WIP+WY VKLVFVAWLVLPQF+GAAF+Y++FVR+QI K+G  G     A   +H
Sbjct: 61  QPILKWIPIWYDVKLVFVAWLVLPQFRGAAFIYEKFVREQIWKHGRAGRAENRASTSHH 119

[Close]

BLAST of CmaCh10G000490 vs. TAIR10
Match: AT5G50720.1 (AT5G50720.1 HVA22 homologue E)

HSP 1 Score: 167.5 bits (423), Expect = 4.8e-42
Identity = 76/105 (72.38%), Postives = 95/105 (90.48%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M++ WT ++ LH L+GPV+MLLYPLYASV+AIES SK+DDEQWLAYWI+YSFLTL E++L
Sbjct: 1   MTKLWTSLSALHSLAGPVVMLLYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELIL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYG 106
           Q +LEWIP+WY+ KLVFVAWLVLPQF+GAAF+Y++ VR+Q KKYG
Sbjct: 61  QSLLEWIPIWYTAKLVFVAWLVLPQFRGAAFIYNKVVREQFKKYG 105

[Close]

BLAST of CmaCh10G000490 vs. TAIR10
Match: AT4G24960.1 (AT4G24960.1 HVA22 homologue D)

HSP 1 Score: 167.2 bits (422), Expect = 6.3e-42
Identity = 75/105 (71.43%), Postives = 96/105 (91.43%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M +FWT +T LH  +GP++MLLYPLYASV+A+EST+K+DDEQWLAYWIIYSFL+L E++L
Sbjct: 1   MDKFWTFLTALHSGAGPIVMLLYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELIL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYG 106
           Q ++EWIP+WY+VKLVFVAWLVLPQF+GAAF+Y+R VR+Q KK+G
Sbjct: 61  QSLIEWIPIWYTVKLVFVAWLVLPQFQGAAFIYNRVVREQFKKHG 105

[Close]

BLAST of CmaCh10G000490 vs. TAIR10
Match: AT1G74520.1 (AT1G74520.1 HVA22 homologue A)

HSP 1 Score: 111.3 bits (277), Expect = 4.1e-25
Identity = 48/92 (52.17%), Postives = 69/92 (75.00%), Query Frame = 1


Query: 7   LVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVLQPVLEW 66
           L+    +L+GPV+ L+YPLYASV AIE+ S  DD+QWL YW++YS LTL+E+    ++EW
Sbjct: 12  LLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIELTFAKLIEW 71

Query: 67  IPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVR 99
           +P+W  +KL+   WLV+P F GAA++Y+ FVR
Sbjct: 72  LPIWSYMKLILTCWLVIPYFSGAAYVYEHFVR 103

[Close]

BLAST of CmaCh10G000490 vs. TAIR10
Match: AT2G42820.1 (AT2G42820.1 HVA22-like protein F)

HSP 1 Score: 111.3 bits (277), Expect = 4.1e-25
Identity = 57/106 (53.77%), Postives = 73/106 (68.87%), Query Frame = 1


Query: 14  LSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVLQPVLEWIPVWYSV 73
           L GP +MLLYPLYAS  AIES + LDD+QWL YWIIYS +T+ E+ +  VL W+P W  +
Sbjct: 14  LVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWRVLAWLPFWPYL 73

Query: 74  KLVFVAWLVLPQFKGAAFLYDRFVRQQIK--KYGGRGSNSADAKAK 118
           KL+F  WLVLP F GAA++Y  FVRQ +K     G G+N  D + +
Sbjct: 74  KLLFCMWLVLPMFSGAAYIYSNFVRQYVKIGMNVGGGTNYTDEQRR 119

[Close]

BLAST of CmaCh10G000490 vs. TAIR10
Match: AT1G69700.1 (AT1G69700.1 HVA22 homologue C)

HSP 1 Score: 97.8 bits (242), Expect = 4.7e-21
Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 1


Query: 7   LVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVLQPVLEW 66
           L+    +L+ P++ L+YPLYASV AIE+ S  +DEQWL YW++Y+ ++L E+     LEW
Sbjct: 14  LIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISLFELTFSKPLEW 73

Query: 67  IPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVR 99
            P+W  +KL  + WLVLPQF GA  +Y  F+R
Sbjct: 74  FPIWPYMKLFGICWLVLPQFNGAEHIYKHFIR 105

[Close]

BLAST of CmaCh10G000490 vs. NCBI nr
Match: gi|449440530|ref|XP_004138037.1| (PREDICTED: HVA22-like protein e [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-51
Identity = 107/119 (89.92%), Postives = 110/119 (92.44%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MS+FWTL TQLH LSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MSKFWTLATQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGRGSNSADAKAKNH 120
           QPVLEWIP+WYSVKLVFVAWLVLPQFKGAAFLY+RF R  IKKY G G NSADAK KNH
Sbjct: 61  QPVLEWIPIWYSVKLVFVAWLVLPQFKGAAFLYERFARPHIKKY-GVGGNSADAKPKNH 118

[Close]

BLAST of CmaCh10G000490 vs. NCBI nr
Match: gi|659128862|ref|XP_008464408.1| (PREDICTED: HVA22-like protein e [Cucumis melo])

HSP 1 Score: 209.5 bits (532), Expect = 3.1e-51
Identity = 107/119 (89.92%), Postives = 110/119 (92.44%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MS+FWTLVTQLH LSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MSKFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGRGSNSADAKAKNH 120
           QPVLEWIP+WYSVKLVF AWLVLPQFKGAAFLY+RF R  IKKYG  GS SADAK KNH
Sbjct: 61  QPVLEWIPIWYSVKLVFAAWLVLPQFKGAAFLYERFARPHIKKYGVGGS-SADAKPKNH 118

[Close]

BLAST of CmaCh10G000490 vs. NCBI nr
Match: gi|657965144|ref|XP_008374217.1| (PREDICTED: HVA22-like protein e isoform X1 [Malus domestica])

HSP 1 Score: 187.2 bits (474), Expect = 1.7e-44
Identity = 93/123 (75.61%), Postives = 103/123 (83.74%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M + WT +TQLH L+GPVL LLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MGKAWTFLTQLHTLAGPVLTLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGG------RGSNSADA 118
           +P LEW+P+WY VKLVFVAWLVLPQFKGAAFLY+R+VR Q++KYGG       G  S   
Sbjct: 61  RPALEWLPIWYDVKLVFVAWLVLPQFKGAAFLYERYVRDQVRKYGGLKDHPKSGKTSPTG 120

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BLAST of CmaCh10G000490 vs. NCBI nr
Match: gi|657965146|ref|XP_008374219.1| (PREDICTED: HVA22-like protein e isoform X2 [Malus domestica])

HSP 1 Score: 187.2 bits (474), Expect = 1.7e-44
Identity = 93/123 (75.61%), Postives = 103/123 (83.74%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M + WT +TQLH L+GPVL LLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MGKAWTFLTQLHTLAGPVLTLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGG------RGSNSADA 118
           +P LEW+P+WY VKLVFVAWLVLPQFKGAAFLY+R+VR Q++KYGG       G  S   
Sbjct: 61  RPALEWLPIWYDVKLVFVAWLVLPQFKGAAFLYERYVRDQVRKYGGLKDHPKSGKTSPTG 120

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BLAST of CmaCh10G000490 vs. NCBI nr
Match: gi|694400164|ref|XP_009375180.1| (PREDICTED: HVA22-like protein e isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43
Identity = 89/123 (72.36%), Postives = 102/123 (82.93%), Query Frame = 1


Query: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M + WT +TQLH L+GP L LLYPLYASV+AIESTSKLDDEQWLAYW+IYSFLTLMEMVL
Sbjct: 1   MGKAWTFLTQLHTLAGPALTLLYPLYASVIAIESTSKLDDEQWLAYWVIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGG------RGSNSADA 118
           +P LEW+P+WY VKLVFVAW+VLPQFKGAAFLY+R+VR Q++KYGG       G  S   
Sbjct: 61  RPALEWLPIWYDVKLVFVAWMVLPQFKGAAFLYERYVRDQVRKYGGLKDHPKSGKTSPTG 120

The following BLAST results are available for this feature:

BLAST of CmaCh10G000490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HA22E_ARATH	8.6e-41	72.38	HVA22-like protein e OS=Arabidopsis thaliana GN=HVA22E PE=2 SV=1	[more]
HA22D_ARATH	1.1e-40	71.43	HVA22-like protein d OS=Arabidopsis thaliana GN=HVA22D PE=2 SV=1	[more]
HVA22_HORVU	9.5e-40	66.39	Protein HVA22 OS=Hordeum vulgare GN=HVA22 PE=2 SV=1	[more]
HA22A_ARATH	7.3e-24	52.17	HVA22-like protein a OS=Arabidopsis thaliana GN=HVA22A PE=2 SV=1	[more]
HA22F_ARATH	7.3e-24	53.77	HVA22-like protein f OS=Arabidopsis thaliana GN=HVA22F PE=2 SV=1	[more]

BLAST of CmaCh10G000490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR70_CUCSA	7.5e-52	89.92	HVA22-like protein OS=Cucumis sativus GN=Csa_1G001410 PE=3 SV=1	[more]
W9QCA6_9ROSA	1.1e-42	74.17	HVA22-like protein OS=Morus notabilis GN=L484_010130 PE=3 SV=1	[more]
V4TJZ1_9ROSI	1.9e-42	81.13	HVA22-like protein OS=Citrus clementina GN=CICLE_v10033011mg PE=3 SV=1	[more]
A0A067FMK6_CITSI	1.9e-42	81.13	HVA22-like protein OS=Citrus sinensis GN=CISIN_1g032264mg PE=3 SV=1	[more]
D7SH16_VITVI	3.2e-42	71.43	HVA22-like protein OS=Vitis vinifera GN=VIT_17s0000g01080 PE=3 SV=1	[more]

BLAST of CmaCh10G000490 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50720.1	4.8e-42	72.38	HVA22 homologue E	[more]
AT4G24960.1	6.3e-42	71.43	HVA22 homologue D	[more]
AT1G74520.1	4.1e-25	52.17	HVA22 homologue A	[more]
AT2G42820.1	4.1e-25	53.77	HVA22-like protein F	[more]
AT1G69700.1	4.7e-21	47.83	HVA22 homologue C	[more]

BLAST of CmaCh10G000490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449440530\|ref\|XP_004138037.1\|	1.1e-51	89.92	PREDICTED: HVA22-like protein e [Cucumis sativus]	[more]
gi\|659128862\|ref\|XP_008464408.1\|	3.1e-51	89.92	PREDICTED: HVA22-like protein e [Cucumis melo]	[more]
gi\|657965144\|ref\|XP_008374217.1\|	1.7e-44	75.61	PREDICTED: HVA22-like protein e isoform X1 [Malus domestica]	[more]
gi\|657965146\|ref\|XP_008374219.1\|	1.7e-44	75.61	PREDICTED: HVA22-like protein e isoform X2 [Malus domestica]	[more]
gi\|694400164\|ref\|XP_009375180.1\|	1.4e-43	72.36	PREDICTED: HVA22-like protein e isoform X1 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004345	TB2_DP1_HVA22

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0006950	response to stress
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G000490.1	CmaCh10G000490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004345	TB2/DP1/HVA22-related protein	PANTHER	PTHR12300	HVA22-LIKE PROTEINS	coord: 1..107 score: 2.5
IPR004345	TB2/DP1/HVA22-related protein	PFAM	PF03134	TB2_DP1_HVA22	coord: 24..99 score: 2.4
None	No IPR available	PANTHER	PTHR12300:SF56	SUBFAMILY NOT NAMED	coord: 1..107 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh10G000490	Cla019290	Watermelon (97103) v1	cmawmB072
CmaCh10G000490	Csa1G001410	Cucumber (Chinese Long) v2	cmacuB048
CmaCh10G000490	MELO3C026192	Melon (DHL92) v3.5.1	cmameB065
CmaCh10G000490	ClCG06G018060	Watermelon (Charleston Gray)	cmawcgB072
CmaCh10G000490	CSPI01G00390	Wild cucumber (PI 183967)	cmacpiB049
CmaCh10G000490	CmoCh10G000440	Cucurbita moschata (Rifu)	cmacmoB067
CmaCh10G000490	Lsi06G016550	Bottle gourd (USVL1VR-Ls)	cmalsiB072
CmaCh10G000490	Cp4.1LG18g09130	Cucurbita pepo (Zucchini)	cmacpeB080
CmaCh10G000490	MELO3C026192.2	Melon (DHL92) v3.6.1	cmamedB068
CmaCh10G000490	CsaV3_1G000410	Cucumber (Chinese Long) v3	cmacucB0058
CmaCh10G000490	Cla97C06G127800	Watermelon (97103) v2	cmawmbB082
CmaCh10G000490	Bhi02G000503	Wax gourd	cmawgoB0080
CmaCh10G000490	CsGy1G000410	Cucumber (Gy14) v2	cgybcmaB004
CmaCh10G000490	Carg10270	Silver-seed gourd	carcmaB0510

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh10G000490	CmaCh11G000230	Cucurbita maxima (Rimu)	cmacmaB073

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh10G000490	Cucurbita pepo (Zucchini)	cmacpeB082
CmaCh10G000490	Cucurbita pepo (Zucchini)	cmacpeB094
CmaCh10G000490	Bottle gourd (USVL1VR-Ls)	cmalsiB056
CmaCh10G000490	Cucumber (Gy14) v2	cgybcmaB025
CmaCh10G000490	Cucumber (Gy14) v2	cgybcmaB289
CmaCh10G000490	Melon (DHL92) v3.6.1	cmamedB053
CmaCh10G000490	Silver-seed gourd	carcmaB0686
CmaCh10G000490	Silver-seed gourd	carcmaB0853
CmaCh10G000490	Cucumber (Chinese Long) v3	cmacucB0078
CmaCh10G000490	Cucumber (Chinese Long) v3	cmacucB0085
CmaCh10G000490	Watermelon (97103) v2	cmawmbB068
CmaCh10G000490	Wax gourd	cmawgoB0066
CmaCh10G000490	Cucurbita maxima (Rimu)	cmacmaB092
CmaCh10G000490	Cucurbita maxima (Rimu)	cmacmaB101
CmaCh10G000490	Cucumber (Gy14) v1	cgycmaB0433
CmaCh10G000490	Cucurbita moschata (Rifu)	cmacmoB069
CmaCh10G000490	Cucurbita moschata (Rifu)	cmacmoB084
CmaCh10G000490	Wild cucumber (PI 183967)	cmacpiB063
CmaCh10G000490	Cucumber (Chinese Long) v2	cmacuB071
CmaCh10G000490	Melon (DHL92) v3.5.1	cmameB051
CmaCh10G000490	Watermelon (Charleston Gray)	cmawcgB061
CmaCh10G000490	Watermelon (97103) v1	cmawmB053