CmaCh11G000110 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh11G000110
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionNAC domain protein,
LocationCma_Chr11 : 56424 .. 57468 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAAGAATCCAGAGCTTTGATGATCAATCTTTCTTTCCCACCCAACTTTTGAAAACCCATAAACGAAGTTTGCGAAAGAAGGCCGCTCTTTCATTTCCTGCACGGAGCTTTATGTGTCATCTTTCCACTCATCGGTCCATACAAAATGGAGGCAAATTCAACTGAGAGGGCAGGATTGATGCAATGGGGTTATAAATGTGGTGGGATTTGGGTGATGAGTTGAGTACTGATGGATAAGTTGAAGTTTGGGAGGGATGGAATGAGGGGATTGCCTCCTGGGTTCCGATTTCAGCCGACGGAAGAAGAGCTTGTGTTTGAGTATCTAAAATGCAAGGTCTTCTCCTGCGCCTTGCCTGCTTCCATCATTCCAGAGGTCAATGTTTGCAACTTCGATCCTTGGGAGGTTCCAGGTGAGATTTGTTTCACTGCATTTAGGGCGTTGTGTTGGCTTGGAAAGTAATGATGGATAAATAATGCATGCAGGAGGGGATTGGGAGGTGAAACAGAGGTGCACATACTTGTTCAGCAACAAGGAAGAAACAGGAAAGAAGAATGGAAGATGCCTGTGGACTCCGAGTGGGTACTGGAAGGCCAAACCCAAAGGGCGTGAAAGGAGAGTAGTAAGCTCCAGTAGTAGCAGTCAGAGCGTGAGTGTGGGGATGAAGAAGACTCTGGTTTTCTACGCCAATAATAGGAACAGAGGTGGGAGTAGGACGGGGTGGATTATGCATCAGTATCGCCTCATCGCCACTCACCCTCCAACTCATACTCCAACTGCATTGAATAACATGAACAAGTGGGCTATTTGCCGCATCTTTTGGAGGAAACTCCAATCCAATAAATATAATCATCATCGTCAACATCATCTGCAACTCCAATATTATTCTATGTCTACGAACCATTCCGACGGCAACGCCTCCGCCGCCCCCTCCACCACCTCATCCTCTTCCAGTACTTCCACCAGTTTCTTCGCCAGCTCTGTCCAACAAAACTCTGACGATGATTTTTCTGCTTCTTAATTATATTTATTTATATATATTTCAT

mRNA sequence

ATAAAGAATCCAGAGCTTTGATGATCAATCTTTCTTTCCCACCCAACTTTTGAAAACCCATAAACGAAGTTTGCGAAAGAAGGCCGCTCTTTCATTTCCTGCACGGAGCTTTATGTGTCATCTTTCCACTCATCGGTCCATACAAAATGGAGGCAAATTCAACTGAGAGGGCAGGATTGATGCAATGGGGTTATAAATGTGGTGGGATTTGGGTGATGAGTTGAGTACTGATGGATAAGTTGAAGTTTGGGAGGGATGGAATGAGGGGATTGCCTCCTGGGTTCCGATTTCAGCCGACGGAAGAAGAGCTTGTGTTTGAGTATCTAAAATGCAAGGTCTTCTCCTGCGCCTTGCCTGCTTCCATCATTCCAGAGGTCAATGTTTGCAACTTCGATCCTTGGGAGGTTCCAGGAGGGGATTGGGAGGTGAAACAGAGGTGCACATACTTGTTCAGCAACAAGGAAGAAACAGGAAAGAAGAATGGAAGATGCCTGTGGACTCCGAGTGGGTACTGGAAGGCCAAACCCAAAGGGCGTGAAAGGAGAGTAGTAAGCTCCAGTAGTAGCAGTCAGAGCGTGAGTGTGGGGATGAAGAAGACTCTGGTTTTCTACGCCAATAATAGGAACAGAGGTGGGAGTAGGACGGGGTGGATTATGCATCAGTATCGCCTCATCGCCACTCACCCTCCAACTCATACTCCAACTGCATTGAATAACATGAACAAGTGGGCTATTTGCCGCATCTTTTGGAGGAAACTCCAATCCAATAAATATAATCATCATCGTCAACATCATCTGCAACTCCAATATTATTCTATGTCTACGAACCATTCCGACGGCAACGCCTCCGCCGCCCCCTCCACCACCTCATCCTCTTCCAGTACTTCCACCAGTTTCTTCGCCAGCTCTGTCCAACAAAACTCTGACGATGATTTTTCTGCTTCTTAATTATATTTATTTATATATATTTCAT

Coding sequence (CDS)

ATGGATAAGTTGAAGTTTGGGAGGGATGGAATGAGGGGATTGCCTCCTGGGTTCCGATTTCAGCCGACGGAAGAAGAGCTTGTGTTTGAGTATCTAAAATGCAAGGTCTTCTCCTGCGCCTTGCCTGCTTCCATCATTCCAGAGGTCAATGTTTGCAACTTCGATCCTTGGGAGGTTCCAGGAGGGGATTGGGAGGTGAAACAGAGGTGCACATACTTGTTCAGCAACAAGGAAGAAACAGGAAAGAAGAATGGAAGATGCCTGTGGACTCCGAGTGGGTACTGGAAGGCCAAACCCAAAGGGCGTGAAAGGAGAGTAGTAAGCTCCAGTAGTAGCAGTCAGAGCGTGAGTGTGGGGATGAAGAAGACTCTGGTTTTCTACGCCAATAATAGGAACAGAGGTGGGAGTAGGACGGGGTGGATTATGCATCAGTATCGCCTCATCGCCACTCACCCTCCAACTCATACTCCAACTGCATTGAATAACATGAACAAGTGGGCTATTTGCCGCATCTTTTGGAGGAAACTCCAATCCAATAAATATAATCATCATCGTCAACATCATCTGCAACTCCAATATTATTCTATGTCTACGAACCATTCCGACGGCAACGCCTCCGCCGCCCCCTCCACCACCTCATCCTCTTCCAGTACTTCCACCAGTTTCTTCGCCAGCTCTGTCCAACAAAACTCTGACGATGATTTTTCTGCTTCTTAA

Protein sequence

MDKLKFGRDGMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVPGGDWEVKQRCTYLFSNKEETGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVSVGMKKTLVFYANNRNRGGSRTGWIMHQYRLIATHPPTHTPTALNNMNKWAICRIFWRKLQSNKYNHHRQHHLQLQYYSMSTNHSDGNASAAPSTTSSSSSTSTSFFASSVQQNSDDDFSAS
Homology
[Close]
BLAST of CmaCh11G000110 vs. Swiss-Prot
Match: NAC83_ARATH (NAC domain-containing protein 83 OS=Arabidopsis thaliana GN=NAC083 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.9e-32
Identity = 100/263 (38.02%), Postives = 140/263 (53.23%), Query Frame = 1 

Query: 1   MDKLKFGRDGMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVP 60
           MD +K  ++G+  LPPGFRF PT+EELV +YLK KV S  LPASIIPE +VC  DPW++P
Sbjct: 1   MDNVKLVKNGVLRLPPGFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFDVCRADPWDLP 60

Query: 61  GGDWEVKQRCTYLFSNKE---ETGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVS 120
           G      ++  Y FS +E     G ++ R   T SGYWKA   G ++RVV+S  +     
Sbjct: 61  GN----LEKERYFFSTREAKYPNGNRSNRA--TGSGYWKA--TGIDKRVVTSRGNQ---I 120

Query: 121 VGMKKTLVFYANNRNRGGSRTGWIMHQYRLIATHPPTHTPTALNNMNKWAICRIFWRKLQ 180
           VG+KKTLVFY   +   GSRT WIMH+YRL ++ P +  PT       W +CRIF +K  
Sbjct: 121 VGLKKTLVFY-KGKPPHGSRTDWIMHEYRLSSSPPSSMGPT-----QNWVLCRIFLKKRA 180

Query: 181 SNK----------YNHHRQHHLQLQYYSMSTNHSDGNASA-------------------A 232
            NK            H+  ++   Q   ++T+ +D                        +
Sbjct: 181 GNKNDDDDGDSRNLRHNNNNNSSDQIEIITTDQTDDKTKPIFFDFMRKERTTDLNLLPSS 240

[Close]
BLAST of CmaCh11G000110 vs. Swiss-Prot
Match: NAC41_ARATH (NAC domain-containing protein 41 OS=Arabidopsis thaliana GN=NAC041 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.4e-28
Identity = 76/180 (42.22%), Postives = 109/180 (60.56%), Query Frame = 1 

Query: 10  GMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVPGGDWEVKQR 69
           G+  LPPGFRF PT+EELV +YL+ KV    LPAS+IPE +VC  DPW++P GD E +  
Sbjct: 11  GVLRLPPGFRFHPTDEELVVQYLRRKVTGLPLPASVIPETDVCKSDPWDLP-GDCESEM- 70

Query: 70  CTYLFSNKE---ETGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVSVGMKKTLVF 129
             Y FS +E     G ++ R   T SGYWKA   G ++++       + + VGMKKTLVF
Sbjct: 71  --YFFSTREAKYPNGNRSNRS--TGSGYWKA--TGLDKQI-----GKKKLVVGMKKTLVF 130

Query: 130 YANNRNRGGSRTGWIMHQYRLIATHPPTHTPTALNNMNKWAICRIFWRKLQSNKYNHHRQ 187
           Y   +   G+RT W++H+YRL+ +   +       NMN W +CR+F +K +SN  +  ++
Sbjct: 131 Y-KGKPPNGTRTNWVLHEYRLVDSQQDS---LYGQNMN-WVLCRVFLKK-RSNSNSKRKE 171

[Close]
BLAST of CmaCh11G000110 vs. Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-26
Identity = 76/186 (40.86%), Postives = 101/186 (54.30%), Query Frame = 1 

Query: 14  LPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVPGGDWEVKQRCTYL 73
           LPPGFRF PT+EELV  YLK K  S  LP +II +V++  FDPWE+P      +Q   Y 
Sbjct: 17  LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQE-WYF 76

Query: 74  FS---NKEETGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVSVGMKKTLVFYANN 133
           FS    K   G +  R     SGYWKA   G ++ V+S+     S  VG+KK LVFY+  
Sbjct: 77  FSPRDRKYPNGARPNRA--ATSGYWKA--TGTDKPVISTGGGG-SKKVGVKKALVFYSGK 136

Query: 134 RNRGGSRTGWIMHQYRLIATHPPTHTPTALNNMNK-----WAICRIFWRKLQSNKYNHHR 192
             + G ++ WIMH+YRL   + PTH     N  N      W +CRI+ +   +   +HH 
Sbjct: 137 PPK-GVKSDWIMHEYRL-TDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNSTASRHHHH 194

[Close]
BLAST of CmaCh11G000110 vs. Swiss-Prot
Match: NAC92_ARATH (NAC domain-containing protein 92 OS=Arabidopsis thaliana GN=NAC92 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.7e-24
Identity = 68/172 (39.53%), Postives = 95/172 (55.23%), Query Frame = 1 

Query: 14  LPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVPGGDWEVK--QRCT 73
           LPPGFRF PT+EEL+  YLK KVF+    A+ I EV++   +PW++P   W+ K  ++  
Sbjct: 20  LPPGFRFHPTDEELITHYLKPKVFNTFFSATAIGEVDLNKIEPWDLP---WKAKMGEKEW 79

Query: 74  YLF---SNKEETGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVSVGMKKTLVFYA 133
           Y F     K  TG +  R   T +GYWKA   G+++ +    S      VGMKKTLVFY 
Sbjct: 80  YFFCVRDRKYPTGLRTNRA--TEAGYWKA--TGKDKEIFKGKS-----LVGMKKTLVFY- 139

Query: 134 NNRNRGGSRTGWIMHQYRLIATHPPTHTPTALNNMNKWAICRIFWRKLQSNK 181
             R   G +T W+MH+YRL   +   + P      N+W ICR+F ++    K
Sbjct: 140 KGRAPKGVKTNWVMHEYRLEGKYCIENLPQTAK--NEWVICRVFQKRADGTK 176

[Close]
BLAST of CmaCh11G000110 vs. Swiss-Prot
Match: NAC29_ARATH (NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.5e-24
Identity = 68/172 (39.53%), Postives = 95/172 (55.23%), Query Frame = 1 

Query: 14  LPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVPGGDWEVKQRCTYL 73
           LPPGFRF PT+EEL+  YL+ +  S   P SIIPEV++  FDPW++P    E  +   Y 
Sbjct: 9   LPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLP-EKTEFGENEWYF 68

Query: 74  FSNKEE---TGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVSVGMKKTLVFYANN 133
           FS +E     G +  R     SGYWKA   G ++ + S SS     +VG+KK LVFY   
Sbjct: 69  FSPRERKYPNGVRPNRA--AVSGYWKA--TGTDKAIHSGSS-----NVGVKKALVFY-KG 128

Query: 134 RNRGGSRTGWIMHQYRLIATHPPTHTPTALNNMNKWAICRIFWRKLQSNKYN 183
           R   G +T WIMH+YRL  +   +        +++W +CRI+ ++  S   N
Sbjct: 129 RPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASKLLN 169

[Close]
BLAST of CmaCh11G000110 vs. TrEMBL
Match: B9I3W7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s10530g PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.3e-38
Identity = 98/196 (50.00%), Postives = 120/196 (61.22%), Query Frame = 1 

Query: 1   MDKLKFGRDGMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVP 60
           M+   F RDGM GLPPGFRFQPTEEELVF+YLK K+ S  LPAS+IPEVNVC +DPWE+P
Sbjct: 1   MENFNFVRDGMSGLPPGFRFQPTEEELVFQYLKRKILSWPLPASVIPEVNVCKYDPWELP 60

Query: 61  GGDWEVKQRCTYLFSNKE---ETGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVS 120
            GD E ++   Y FSNKE     G +  R   + SGYWKA   G +R++VSSS  +  V 
Sbjct: 61  -GDMEQER---YFFSNKEAKYPNGNRVNRA--SSSGYWKA--TGLDRQIVSSSWKNNHV- 120

Query: 121 VGMKKTLVFYANNRNRGGSRTGWIMHQYRLI--------ATHPPTH-------------T 173
           VGMKKTLVFY   +   GSRT W+MH+YRL+        +  P T              T
Sbjct: 121 VGMKKTLVFY-RGKAPHGSRTDWVMHEYRLVNLGVETTDSNFPQTENSAQASYYYIFYAT 180

[Close]
BLAST of CmaCh11G000110 vs. TrEMBL
Match: G7LI31_MEDTR (NAC transcription factor-like protein OS=Medicago truncatula GN=MTR_8g099750 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 9.5e-38
Identity = 102/238 (42.86%), Postives = 146/238 (61.34%), Query Frame = 1 

Query: 1   MDKLKFGRDGMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVP 60
           MDKL F ++G+  LPPGFRFQPT+EELVF YLKCK+FSC LPASIIPEVNVC +DPW++P
Sbjct: 1   MDKLNFIKNGVSRLPPGFRFQPTDEELVFNYLKCKIFSCPLPASIIPEVNVCKYDPWDLP 60

Query: 61  GGDWEVKQRCTYLFSNKEETGKKNGR-CLWTPSGYWKAKPKGRERRVVSSSSSSQSVSVG 120
           GG  E ++   + FS+KE   + + R    T  GYWKA   G ++++   SSS+ +   G
Sbjct: 61  GGCDEQER---HFFSSKEAKYRNSNRMSRTTKCGYWKA--TGSDKKI---SSSTCNGIAG 120

Query: 121 MKKTLVFYANNRNRGGSRTGWIMHQYRLIATHPPTHTPTAL-NNMNKWAICRIFWRKLQS 180
           ++KTLVFY   ++  GSRT WI+H+YRLI      ++     N + +W +CR+  RK   
Sbjct: 121 LRKTLVFY-EGKSPNGSRTDWILHEYRLINVETTNNSAQNYGNEIGEWVLCRLSVRKRSG 180

Query: 181 NKYNHHRQHHLQLQYYSMSTNHSDGNASAAPSTTSSSSSTSTSFFASSVQQNSDDDFS 237
            +Y      + +L +  M  N+         ST+SS SS+S +   SS  Q+ + D++
Sbjct: 181 LEYGSTSTPNSRLMFDFMMVNN-----KTCSSTSSSCSSSSNNIEVSSNVQDHEQDYA 224

[Close]
BLAST of CmaCh11G000110 vs. TrEMBL
Match: M5WSR9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa027024mg PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.0e-37
Identity = 105/242 (43.39%), Postives = 147/242 (60.74%), Query Frame = 1 

Query: 1   MDKLKFGRDGMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVP 60
           MDK  F R+GM  LPPGFRFQPT+EELVF+YL+CKVFSC LPASIIPEVNVC +DPW++P
Sbjct: 1   MDKFNFVRNGMIRLPPGFRFQPTDEELVFQYLRCKVFSCPLPASIIPEVNVCMYDPWDLP 60

Query: 61  GGDWEVKQRCTYLFSNKEETGKKNGRC-LWTPSGYWKAKPKGRERRVVSSSSSSQSVSVG 120
            GD E ++   Y FSNKE   +   R    T SGYWKA   G ++++V   SS ++  VG
Sbjct: 61  -GDLEQER---YFFSNKESKYRNGSRANRVTSSGYWKA--TGTDKKIV---SSRRNHIVG 120

Query: 121 MKKTLVFYANNRNRGGSRTGWIMHQYRLIATHPPTHTPTALNNMNK---WAICRIFWRK- 180
            KKTLVFY   +   G +T W+MH+Y L+         TA N +N+   W +CRIF +K 
Sbjct: 121 KKKTLVFY-RGKAPNGCKTDWVMHEYCLVNAETTASINTAENALNEKENWVLCRIFSKKR 180

Query: 181 -LQSNKYNHHRQHHLQLQYYSMSTNHSDGNASAAPSTTSSSSSTSTSFFASSVQQNSDDD 237
             +++     R ++ ++ +   + N    N S   S++S SSS+  +   SS +   +++
Sbjct: 181 SCKTDDEEGIRVNNAEMVHAPQTNN----NQSPVSSSSSCSSSSGITEVTSSSEAGDEEE 228

[Close]
BLAST of CmaCh11G000110 vs. TrEMBL
Match: R4NEP6_JATCU (NAC transcription factor 010 OS=Jatropha curcas GN=JCGZ_26399 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.0e-36
Identity = 113/252 (44.84%), Postives = 154/252 (61.11%), Query Frame = 1 

Query: 1   MDKLKFGRDGMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVP 60
           M+KL F R+GM  LPPGFRFQPT+EELVFEYLK KV S  LPASIIPE+NVC FDPW++P
Sbjct: 1   MEKLNFMREGMIKLPPGFRFQPTDEELVFEYLKRKVLSWPLPASIIPEINVCKFDPWDLP 60

Query: 61  GGDWEVKQRCTYLFSNKE---ETGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVS 120
            GD E ++   Y FSNKE     G +  R   T SGYWKA   G +R++   SSSS++  
Sbjct: 61  -GDMEQER---YFFSNKEAKYPNGNRINRA--TASGYWKA--TGVDRQI--GSSSSRNNI 120

Query: 121 VGMKKTLVFYANNRNRGGSRTGWIMHQYRLI------ATHPPTH--TPTALNNMNKWAIC 180
           +GMKKTLVFY   +    SRT WIMH+YRL+      +  P T+     + N + KW +C
Sbjct: 121 IGMKKTLVFY-RGKTPNASRTDWIMHEYRLVSLGTTASNFPLTNNSVQNSFNQLEKWVLC 180

Query: 181 RIFWRKLQS---NKYNHHRQHHLQLQYYSMSTNHSDGNASAAPSTTSSSSSTSTSFFASS 239
           RIF +K  S       + R ++ + ++Y   T  +    ++  S +SSS+ +S +  ASS
Sbjct: 181 RIFLKKRNSEIIEDCRNGRINNAEPRFYDFMTRDN----ASFDSVSSSSNCSSITDEASS 237

[Close]
BLAST of CmaCh11G000110 vs. TrEMBL
Match: C6T5H0_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.0e-36
Identity = 87/187 (46.52%), Postives = 120/187 (64.17%), Query Frame = 1 

Query: 1   MDKLKFGRDGMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVP 60
           M++L F ++G+  LPPGFRFQPT+EELVF+YLK K+FSC LPASIIPE+NV   DPW++P
Sbjct: 1   MERLNFIKNGVSRLPPGFRFQPTDEELVFQYLKRKIFSCQLPASIIPEINVSKNDPWDLP 60

Query: 61  GGDWEVKQRCTYLFSNKEETGKKNGRC-LWTPSGYWKAKPKGRERRVVSSSSSSQSVSVG 120
           G   E ++   Y FS+KE   +   R    T SGYWKA   G ++++  SSS S     G
Sbjct: 61  GNCDEQER---YFFSSKEVKYRNGNRMNRTTNSGYWKA--TGSDKKI--SSSISNIGFAG 120

Query: 121 MKKTLVFYANNRNRGGSRTGWIMHQYRLIA--THPPTHTPTALNNMNKWAICRIFWRKLQ 180
           ++KTLVFY   ++  GSRT W+MH+YRL++  T P   +    N +  W +CRIF +K  
Sbjct: 121 LRKTLVFY-EGKSPNGSRTDWVMHEYRLVSLETIPSNSSQNYANEIGDWILCRIFMKKRS 179

Query: 181 SNKYNHH 185
               N++
Sbjct: 181 IESDNNN 179

[Close]
BLAST of CmaCh11G000110 vs. TAIR10
Match: AT5G13180.1 (AT5G13180.1 NAC domain containing protein 83)

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33
Identity = 100/263 (38.02%), Postives = 140/263 (53.23%), Query Frame = 1 

Query: 1   MDKLKFGRDGMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVP 60
           MD +K  ++G+  LPPGFRF PT+EELV +YLK KV S  LPASIIPE +VC  DPW++P
Sbjct: 1   MDNVKLVKNGVLRLPPGFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFDVCRADPWDLP 60

Query: 61  GGDWEVKQRCTYLFSNKE---ETGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVS 120
           G      ++  Y FS +E     G ++ R   T SGYWKA   G ++RVV+S  +     
Sbjct: 61  GN----LEKERYFFSTREAKYPNGNRSNRA--TGSGYWKA--TGIDKRVVTSRGNQ---I 120

Query: 121 VGMKKTLVFYANNRNRGGSRTGWIMHQYRLIATHPPTHTPTALNNMNKWAICRIFWRKLQ 180
           VG+KKTLVFY   +   GSRT WIMH+YRL ++ P +  PT       W +CRIF +K  
Sbjct: 121 VGLKKTLVFY-KGKPPHGSRTDWIMHEYRLSSSPPSSMGPT-----QNWVLCRIFLKKRA 180

Query: 181 SNK----------YNHHRQHHLQLQYYSMSTNHSDGNASA-------------------A 232
            NK            H+  ++   Q   ++T+ +D                        +
Sbjct: 181 GNKNDDDDGDSRNLRHNNNNNSSDQIEIITTDQTDDKTKPIFFDFMRKERTTDLNLLPSS 240

[Close]
BLAST of CmaCh11G000110 vs. TAIR10
Match: AT2G33480.1 (AT2G33480.1 NAC domain containing protein 41)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-29
Identity = 76/180 (42.22%), Postives = 109/180 (60.56%), Query Frame = 1 

Query: 10  GMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVPGGDWEVKQR 69
           G+  LPPGFRF PT+EELV +YL+ KV    LPAS+IPE +VC  DPW++P GD E +  
Sbjct: 11  GVLRLPPGFRFHPTDEELVVQYLRRKVTGLPLPASVIPETDVCKSDPWDLP-GDCESEM- 70

Query: 70  CTYLFSNKE---ETGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVSVGMKKTLVF 129
             Y FS +E     G ++ R   T SGYWKA   G ++++       + + VGMKKTLVF
Sbjct: 71  --YFFSTREAKYPNGNRSNRS--TGSGYWKA--TGLDKQI-----GKKKLVVGMKKTLVF 130

Query: 130 YANNRNRGGSRTGWIMHQYRLIATHPPTHTPTALNNMNKWAICRIFWRKLQSNKYNHHRQ 187
           Y   +   G+RT W++H+YRL+ +   +       NMN W +CR+F +K +SN  +  ++
Sbjct: 131 Y-KGKPPNGTRTNWVLHEYRLVDSQQDS---LYGQNMN-WVLCRVFLKK-RSNSNSKRKE 171

[Close]
BLAST of CmaCh11G000110 vs. TAIR10
Match: AT1G52880.1 (AT1G52880.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-27
Identity = 76/186 (40.86%), Postives = 101/186 (54.30%), Query Frame = 1 

Query: 14  LPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVPGGDWEVKQRCTYL 73
           LPPGFRF PT+EELV  YLK K  S  LP +II +V++  FDPWE+P      +Q   Y 
Sbjct: 17  LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQE-WYF 76

Query: 74  FS---NKEETGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVSVGMKKTLVFYANN 133
           FS    K   G +  R     SGYWKA   G ++ V+S+     S  VG+KK LVFY+  
Sbjct: 77  FSPRDRKYPNGARPNRA--ATSGYWKA--TGTDKPVISTGGGG-SKKVGVKKALVFYSGK 136

Query: 134 RNRGGSRTGWIMHQYRLIATHPPTHTPTALNNMNK-----WAICRIFWRKLQSNKYNHHR 192
             + G ++ WIMH+YRL   + PTH     N  N      W +CRI+ +   +   +HH 
Sbjct: 137 PPK-GVKSDWIMHEYRL-TDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNSTASRHHHH 194

[Close]
BLAST of CmaCh11G000110 vs. TAIR10
Match: AT5G39610.1 (AT5G39610.1 NAC domain containing protein 6)

HSP 1 Score: 114.4 bits (285), Expect = 9.7e-26
Identity = 68/172 (39.53%), Postives = 95/172 (55.23%), Query Frame = 1 

Query: 14  LPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVPGGDWEVK--QRCT 73
           LPPGFRF PT+EEL+  YLK KVF+    A+ I EV++   +PW++P   W+ K  ++  
Sbjct: 20  LPPGFRFHPTDEELITHYLKPKVFNTFFSATAIGEVDLNKIEPWDLP---WKAKMGEKEW 79

Query: 74  YLF---SNKEETGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVSVGMKKTLVFYA 133
           Y F     K  TG +  R   T +GYWKA   G+++ +    S      VGMKKTLVFY 
Sbjct: 80  YFFCVRDRKYPTGLRTNRA--TEAGYWKA--TGKDKEIFKGKS-----LVGMKKTLVFY- 139

Query: 134 NNRNRGGSRTGWIMHQYRLIATHPPTHTPTALNNMNKWAICRIFWRKLQSNK 181
             R   G +T W+MH+YRL   +   + P      N+W ICR+F ++    K
Sbjct: 140 KGRAPKGVKTNWVMHEYRLEGKYCIENLPQTAK--NEWVICRVFQKRADGTK 176

[Close]
BLAST of CmaCh11G000110 vs. TAIR10
Match: AT1G69490.1 (AT1G69490.1 NAC-like, activated by AP3/PI)

HSP 1 Score: 112.5 bits (280), Expect = 3.7e-25
Identity = 68/172 (39.53%), Postives = 95/172 (55.23%), Query Frame = 1 

Query: 14  LPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVPGGDWEVKQRCTYL 73
           LPPGFRF PT+EEL+  YL+ +  S   P SIIPEV++  FDPW++P    E  +   Y 
Sbjct: 9   LPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLP-EKTEFGENEWYF 68

Query: 74  FSNKEE---TGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVSVGMKKTLVFYANN 133
           FS +E     G +  R     SGYWKA   G ++ + S SS     +VG+KK LVFY   
Sbjct: 69  FSPRERKYPNGVRPNRA--AVSGYWKA--TGTDKAIHSGSS-----NVGVKKALVFY-KG 128

Query: 134 RNRGGSRTGWIMHQYRLIATHPPTHTPTALNNMNKWAICRIFWRKLQSNKYN 183
           R   G +T WIMH+YRL  +   +        +++W +CRI+ ++  S   N
Sbjct: 129 RPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASKLLN 169

[Close]
BLAST of CmaCh11G000110 vs. NCBI nr
Match: gi|743899486|ref|XP_011043026.1| (PREDICTED: NAC transcription factor 25-like [Populus euphratica])

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-38
Identity = 96/185 (51.89%), Postives = 120/185 (64.86%), Query Frame = 1 

Query: 1   MDKLKFGRDGMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVP 60
           M+   F RDGM GLPPGFRFQPTEEELVF+YLK K+ S  LPAS+IPEVNVC +DPWE+P
Sbjct: 1   METFNFVRDGMSGLPPGFRFQPTEEELVFQYLKRKILSWPLPASVIPEVNVCKYDPWELP 60

Query: 61  GGDWEVKQRCTYLFSNKE---ETGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVS 120
            GD E ++   Y FSNKE     G +  R   + SGYWKA   G ++++VSSS  +  V 
Sbjct: 61  -GDMEQER---YFFSNKEAKYPNGNRVNRA--SSSGYWKA--TGLDKQIVSSSWKNNHV- 120

Query: 121 VGMKKTLVFYANNRNRGGSRTGWIMHQYRLI--------ATHPPTHTPTALNN--MNKWA 173
           VGMKKTLVFY   +   GSRT W+MH+YRL+        +  P T      ++  M+KW 
Sbjct: 121 VGMKKTLVFY-RGKAPHGSRTDWVMHEYRLVNLGVETTDSNFPQTENSAQNSSFQMDKWV 175

[Close]
BLAST of CmaCh11G000110 vs. NCBI nr
Match: gi|657965118|ref|XP_008374203.1| (PREDICTED: NAC transcription factor 25-like [Malus domestica])

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-38
Identity = 104/225 (46.22%), Postives = 140/225 (62.22%), Query Frame = 1 

Query: 1   MDKLKFGRDGMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVP 60
           MDK KF R+GM  LPPGFRFQPT+EELVF+YL+CKVFSC LPASIIPE+NVC +DPW++P
Sbjct: 1   MDKFKFVRNGMIRLPPGFRFQPTDEELVFQYLRCKVFSCPLPASIIPEINVCMYDPWDLP 60

Query: 61  GGDWEVKQRCTYLFSNKEETGKKNGRC-LWTPSGYWKAKPKGRERRVVSSSSSSQSVSVG 120
           G      ++  Y FSNKE   +   R    T SGYWKA   G ++++V   SS ++  VG
Sbjct: 61  GN----LEQERYFFSNKESKYRNGNRANRVTSSGYWKA--TGADKKIV---SSRRNHIVG 120

Query: 121 MKKTLVFYANNRNRGGSRTGWIMHQYRLI--ATHPPTH-TPTALNNMNKWAICRIFWRKL 180
            KKTLVFY   ++   S+T W+MH+Y L+   T    H T  AL     W +CR+F +K 
Sbjct: 121 KKKTLVFY-RGKSPHVSKTDWVMHEYCLVNAETTASIHATENALTPKGNWVLCRVFSKK- 180

Query: 181 QSNKYNHHRQHHLQLQYYSMSTNHSDGNASAAPSTTSSSSSTSTS 222
           +S K N      + + Y S+  N++   AS++ S +SSS  T  +
Sbjct: 181 RSGKMN----EEIVVNYNSIKVNNNANPASSSSSCSSSSGITEVT 210

[Close]
BLAST of CmaCh11G000110 vs. NCBI nr
Match: gi|224119758|ref|XP_002318155.1| (hypothetical protein POPTR_0012s10530g [Populus trichocarpa])

HSP 1 Score: 166.8 bits (421), Expect = 4.7e-38
Identity = 98/196 (50.00%), Postives = 120/196 (61.22%), Query Frame = 1 

Query: 1   MDKLKFGRDGMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVP 60
           M+   F RDGM GLPPGFRFQPTEEELVF+YLK K+ S  LPAS+IPEVNVC +DPWE+P
Sbjct: 1   MENFNFVRDGMSGLPPGFRFQPTEEELVFQYLKRKILSWPLPASVIPEVNVCKYDPWELP 60

Query: 61  GGDWEVKQRCTYLFSNKE---ETGKKNGRCLWTPSGYWKAKPKGRERRVVSSSSSSQSVS 120
            GD E ++   Y FSNKE     G +  R   + SGYWKA   G +R++VSSS  +  V 
Sbjct: 61  -GDMEQER---YFFSNKEAKYPNGNRVNRA--SSSGYWKA--TGLDRQIVSSSWKNNHV- 120

Query: 121 VGMKKTLVFYANNRNRGGSRTGWIMHQYRLI--------ATHPPTH-------------T 173
           VGMKKTLVFY   +   GSRT W+MH+YRL+        +  P T              T
Sbjct: 121 VGMKKTLVFY-RGKAPHGSRTDWVMHEYRLVNLGVETTDSNFPQTENSAQASYYYIFYAT 180

[Close]
BLAST of CmaCh11G000110 vs. NCBI nr
Match: gi|357520527|ref|XP_003630552.1| (NAC transcription factor-like protein [Medicago truncatula])

HSP 1 Score: 165.2 bits (417), Expect = 1.4e-37
Identity = 102/238 (42.86%), Postives = 146/238 (61.34%), Query Frame = 1 

Query: 1   MDKLKFGRDGMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVP 60
           MDKL F ++G+  LPPGFRFQPT+EELVF YLKCK+FSC LPASIIPEVNVC +DPW++P
Sbjct: 1   MDKLNFIKNGVSRLPPGFRFQPTDEELVFNYLKCKIFSCPLPASIIPEVNVCKYDPWDLP 60

Query: 61  GGDWEVKQRCTYLFSNKEETGKKNGR-CLWTPSGYWKAKPKGRERRVVSSSSSSQSVSVG 120
           GG  E ++   + FS+KE   + + R    T  GYWKA   G ++++   SSS+ +   G
Sbjct: 61  GGCDEQER---HFFSSKEAKYRNSNRMSRTTKCGYWKA--TGSDKKI---SSSTCNGIAG 120

Query: 121 MKKTLVFYANNRNRGGSRTGWIMHQYRLIATHPPTHTPTAL-NNMNKWAICRIFWRKLQS 180
           ++KTLVFY   ++  GSRT WI+H+YRLI      ++     N + +W +CR+  RK   
Sbjct: 121 LRKTLVFY-EGKSPNGSRTDWILHEYRLINVETTNNSAQNYGNEIGEWVLCRLSVRKRSG 180

Query: 181 NKYNHHRQHHLQLQYYSMSTNHSDGNASAAPSTTSSSSSTSTSFFASSVQQNSDDDFS 237
            +Y      + +L +  M  N+         ST+SS SS+S +   SS  Q+ + D++
Sbjct: 181 LEYGSTSTPNSRLMFDFMMVNN-----KTCSSTSSSCSSSSNNIEVSSNVQDHEQDYA 224

[Close]
BLAST of CmaCh11G000110 vs. NCBI nr
Match: gi|1012228628|ref|XP_015937761.1| (PREDICTED: NAC domain-containing protein 83 isoform X2 [Arachis duranensis])

HSP 1 Score: 165.2 bits (417), Expect = 1.4e-37
Identity = 101/233 (43.35%), Postives = 152/233 (65.24%), Query Frame = 1 

Query: 4   LKFGRDGMRGLPPGFRFQPTEEELVFEYLKCKVFSCALPASIIPEVNVCNFDPWEVPGGD 63
           +K  ++G+R LPPGFRFQPTEEEL+F+YLKCKVFS  LPASIIPE+NVCN+DPW++PG +
Sbjct: 9   VKKNKNGVRLLPPGFRFQPTEEELLFQYLKCKVFSFQLPASIIPEINVCNYDPWDLPGNN 68

Query: 64  ---WEVKQRCTYLFSNKEETGKKNGRC-LWTPSGYWKAKPKGRERRVVSSSSSSQSVS-- 123
               E ++R  YLFS+KE   +   R    T SGYWKA   G ++R++S+SS++ + +  
Sbjct: 69  NNYGEEEER--YLFSSKEVKYRNGNRMNRITKSGYWKA--TGSDKRIISTSSNNNNNNNI 128

Query: 124 VGMKKTLVFYANNRNRGGSRTGWIMHQYRLIATHPPTHTPTALNNMNKWAICRIFWRKLQ 183
           VG++KTLVFY + ++  GSRT WIM +YRL+ T  P+++   + ++  W +CRIF +K  
Sbjct: 129 VGIRKTLVFY-HGKSPNGSRTHWIMREYRLVTT--PSNSSQYVEDLGNWVLCRIFKKKRS 188

Query: 184 SNKYNHHRQHHLQLQYYSMSTNHSD-----GNASAAPSTTSSSSSTSTSFFAS 226
               +H  ++ +      ++ N+++            S  SSSSS+S+S  +S
Sbjct: 189 IESQHHMVKNKINNNVVEVANNNNNKPIFFDFMRLYDSPISSSSSSSSSCLSS 234

The following BLAST results are available for this feature:
BLAST of CmaCh11G000110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NAC83_ARATH2.9e-3238.02NAC domain-containing protein 83 OS=Arabidopsis thaliana GN=NAC083 PE=1 SV=1[more]
NAC41_ARATH3.4e-2842.22NAC domain-containing protein 41 OS=Arabidopsis thaliana GN=NAC041 PE=2 SV=1[more]
NAC18_ARATH2.4e-2640.86NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1[more]
NAC92_ARATH1.7e-2439.53NAC domain-containing protein 92 OS=Arabidopsis thaliana GN=NAC92 PE=1 SV=1[more]
NAC29_ARATH6.5e-2439.53NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1[more]
BLAST of CmaCh11G000110 vs. TrEMBL
Match NameE-valueIdentityDescription
B9I3W7_POPTR3.3e-3850.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s10530g PE=4 SV=1[more]
G7LI31_MEDTR9.5e-3842.86NAC transcription factor-like protein OS=Medicago truncatula GN=MTR_8g099750 PE=... [more]
M5WSR9_PRUPE8.0e-3743.39Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa027024mg PE=4 SV=1[more]
R4NEP6_JATCU1.0e-3644.84NAC transcription factor 010 OS=Jatropha curcas GN=JCGZ_26399 PE=4 SV=1[more]
C6T5H0_SOYBN4.0e-3646.52Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1[more]
BLAST of CmaCh11G000110 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G13180.11.7e-3338.02 NAC domain containing protein 83[more]
AT2G33480.11.9e-2942.22 NAC domain containing protein 41[more]
AT1G52880.11.4e-2740.86 NAC (No Apical Meristem) domain transcriptional regulator superfamil... [more]
AT5G39610.19.7e-2639.53 NAC domain containing protein 6[more]
AT1G69490.13.7e-2539.53 NAC-like, activated by AP3/PI[more]
BLAST of CmaCh11G000110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|743899486|ref|XP_011043026.1|1.6e-3851.89PREDICTED: NAC transcription factor 25-like [Populus euphratica][more]
gi|657965118|ref|XP_008374203.1|1.6e-3846.22PREDICTED: NAC transcription factor 25-like [Malus domestica][more]
gi|224119758|ref|XP_002318155.1|4.7e-3850.00hypothetical protein POPTR_0012s10530g [Populus trichocarpa][more]
gi|357520527|ref|XP_003630552.1|1.4e-3742.86NAC transcription factor-like protein [Medicago truncatula][more]
gi|1012228628|ref|XP_015937761.1|1.4e-3743.35PREDICTED: NAC domain-containing protein 83 isoform X2 [Arachis duranensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003441NAC-dom
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G000110.1CmaCh11G000110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003441NAC domainPFAMPF02365NAMcoord: 15..147
score: 1.5
IPR003441NAC domainPROFILEPS51005NACcoord: 14..174
score: 39
IPR003441NAC domainunknownSSF101941NAC domaincoord: 11..174
score: 4.71
NoneNo IPR availablePANTHERPTHR31989FAMILY NOT NAMEDcoord: 1..236
score: 3.3