CSPI01G00270 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G00270
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	NAC domain protein
Location	Chr1 : 149309 .. 150225 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGGATTGCCACCTGGATTTCGGTTTGAGCCAACAGAAGAAGAGCTTGTGTTTGAGTATCTAAAATGCAAGGTCTTCTCCTCAGCCTTGCCTGCTTCTATCATTCCAGAGATCAATGGCGTTTGGAGTTTGGATCCTTGGGATATTCCTGCTGCAGGTGAAATTAAGTTTATGATTTATGAATACATGAATTGGGATATATGTGTGTGTGTGTGTGTGTGTGTGGTTTTAATTAATTAAAATTAAAAGATGTATGTTATTGGAATTGGTTATTATAGGTGGTGGGGATGAAGAGAAATACTTATTCAGCAAGGAGGCAGAGGAACATAACAATAACAATAATGGAGAAGGAGGAGGAATAATTGGATGGAGTAAGAGTGGATACTGGAAGGCAAGAGGAAGGGAGAAGGAAATAGTAAGTAATGAGAATGGAGTGGCATTAATGGGTATGAAGAACACTCTGGATTTCTACACCAACAACATCAGGAAGATGAAGAAGACAGGTTGGGTGATGCATCAGTATCGTCTCATAATACCACATTCTCACTCTTCAACTAACAAATGGGTTCTTTGTCACATCCTTTCTCCTACTAATAAATTATTCAGTCATATTGTTCACCCCCACCGCCACCGCCGCCGCCTCCATTGTTCTATTTCTTCTACAAAGGATGTGAATGGGGATCATGAGGATGAGCATGATGAGCATGTGAATCACATCACTACTTCCACCGCCTTCTCCGACGACGAACATGATTCTGTTTCCTCCACCGCCTCATCCTCTTCCACATCCGCCACCTTCACCGATTTCACATCTACAGCTACTACTACTACATTCCACTTCTAGTTAATTATTCATTATTATGATCATTATTGTTCCCATCTTTCGTCGTCTCTTCTTATAACTATATCATATG

mRNA sequence

ATGAGAGGATTGCCACCTGGATTTCGGTTTGAGCCAACAGAAGAAGAGCTTGTGTTTGAGTATCTAAAATGCAAGGTCTTCTCCTCAGCCTTGCCTGCTTCTATCATTCCAGAGATCAATGGCGTTTGGAGTTTGGATCCTTGGGATATTCCTGCTGCAGGTGGTGGGGATGAAGAGAAATACTTATTCAGCAAGGAGGCAGAGGAACATAACAATAACAATAATGGAGAAGGAGGAGGAATAATTGGATGGAGTAAGAGTGGATACTGGAAGGCAAGAGGAAGGGAGAAGGAAATAGTAAGTAATGAGAATGGAGTGGCATTAATGGGTATGAAGAACACTCTGGATTTCTACACCAACAACATCAGGAAGATGAAGAAGACAGGTTGGGTGATGCATCAGTATCGTCTCATAATACCACATTCTCACTCTTCAACTAACAAATGGGTTCTTTGTCACATCCTTTCTCCTACTAATAAATTATTCAGTCATATTGTTCACCCCCACCGCCACCGCCGCCGCCTCCATTGTTCTATTTCTTCTACAAAGGATGTGAATGGGGATCATGAGGATGAGCATGATGAGCATGTGAATCACATCACTACTTCCACCGCCTTCTCCGACGACGAACATGATTCTGTTTCCTCCACCGCCTCATCCTCTTCCACATCCGCCACCTTCACCGATTTCACATCTACAGCTACTACTACTACATTCCACTTCTAG

Coding sequence (CDS)

ATGAGAGGATTGCCACCTGGATTTCGGTTTGAGCCAACAGAAGAAGAGCTTGTGTTTGAGTATCTAAAATGCAAGGTCTTCTCCTCAGCCTTGCCTGCTTCTATCATTCCAGAGATCAATGGCGTTTGGAGTTTGGATCCTTGGGATATTCCTGCTGCAGGTGGTGGGGATGAAGAGAAATACTTATTCAGCAAGGAGGCAGAGGAACATAACAATAACAATAATGGAGAAGGAGGAGGAATAATTGGATGGAGTAAGAGTGGATACTGGAAGGCAAGAGGAAGGGAGAAGGAAATAGTAAGTAATGAGAATGGAGTGGCATTAATGGGTATGAAGAACACTCTGGATTTCTACACCAACAACATCAGGAAGATGAAGAAGACAGGTTGGGTGATGCATCAGTATCGTCTCATAATACCACATTCTCACTCTTCAACTAACAAATGGGTTCTTTGTCACATCCTTTCTCCTACTAATAAATTATTCAGTCATATTGTTCACCCCCACCGCCACCGCCGCCGCCTCCATTGTTCTATTTCTTCTACAAAGGATGTGAATGGGGATCATGAGGATGAGCATGATGAGCATGTGAATCACATCACTACTTCCACCGCCTTCTCCGACGACGAACATGATTCTGTTTCCTCCACCGCCTCATCCTCTTCCACATCCGCCACCTTCACCGATTTCACATCTACAGCTACTACTACTACATTCCACTTCTAG

Homology

[Close]

BLAST of CSPI01G00270 vs. Swiss-Prot
Match: NAC41_ARATH (NAC domain-containing protein 41 OS=Arabidopsis thaliana GN=NAC041 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.3e-24
Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEKYLF 63
           LPPGFRF PT+EELV +YL+ KV    LPAS+IPE + V   DPWD+P  G  + E Y F
Sbjct: 15  LPPGFRFHPTDEELVVQYLRRKVTGLPLPASVIPETD-VCKSDPWDLP--GDCESEMYFF 74

Query: 64  S-KEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTNNI 123
           S +EA+  N N +    G      SGYWKA G +K+I   +    ++GMK TL FY    
Sbjct: 75  STREAKYPNGNRSNRSTG------SGYWKATGLDKQIGKKK---LVVGMKKTLVFYKGKP 134

Query: 124 RKMKKTGWVMHQYRLIIPHSHS---STNKWVLCHI 155
               +T WV+H+YRL+     S       WVLC +
Sbjct: 135 PNGTRTNWVLHEYRLVDSQQDSLYGQNMNWVLCRV 157

[Close]

BLAST of CSPI01G00270 vs. Swiss-Prot
Match: NAC83_ARATH (NAC domain-containing protein 83 OS=Arabidopsis thaliana GN=NAC083 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.7e-24
Identity = 86/237 (36.29%), Postives = 117/237 (49.37%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEKYLF 63
           LPPGFRF PT+EELV +YLK KV SS LPASIIPE + V   DPWD+P  G  ++E+Y F
Sbjct: 14  LPPGFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFD-VCRADPWDLP--GNLEKERYFF 73

Query: 64  S-KEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTNNI 123
           S +EA+  N N +    G      SGYWKA G +K +V++  G  ++G+K TL FY    
Sbjct: 74  STREAKYPNGNRSNRATG------SGYWKATGIDKRVVTS-RGNQIVGLKKTLVFYKGKP 133

Query: 124 RKMKKTGWVMHQYRLII--PHSHSSTNKWVLCHILSPTNKLFSHIVHPHRHRRRLHCSIS 183
               +T W+MH+YRL    P S   T  WVLC I                        + 
Sbjct: 134 PHGSRTDWIMHEYRLSSSPPSSMGPTQNWVLCRIF-----------------------LK 193

Query: 184 STKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTATTT 238
                  D +D    ++ H   +   S D+ + +++  +   T   F DF     TT
Sbjct: 194 KRAGNKNDDDDGDSRNLRHNNNNN--SSDQIEIITTDQTDDKTKPIFFDFMRKERTT 215

[Close]

BLAST of CSPI01G00270 vs. Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-23
Identity = 68/179 (37.99%), Postives = 95/179 (53.07%), Query Frame = 1


Query: 2   RGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIP-AAGGGDEEK 61
           RGLPPGFRF PT+EEL+  YL  K+F   L    I E++ +   +PW++P  A  G+ E 
Sbjct: 20  RGLPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVD-LNRCEPWELPEMAKMGEREW 79

Query: 62  YLFSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTN 121
           Y +S    ++              + +GYWKA G++KE+ S   G  L+GMK TL FY  
Sbjct: 80  YFYSLRDRKYPTGLRTNRA-----TTAGYWKATGKDKEVFSGGGG-QLVGMKKTLVFYKG 139

Query: 122 NIRKMKKTGWVMHQYRLIIPHSHSSTNK--WVLCHILSPTNK------LFSHIVHPHRH 172
              +  KT WVMH+YRL   HSH  T K  WV+C + + T        + + I + H H
Sbjct: 140 RAPRGLKTKWVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDRKNVGLIHNQISYLHNH 191

[Close]

BLAST of CSPI01G00270 vs. Swiss-Prot
Match: NAC10_ORYSJ (NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.9e-23
Identity = 68/181 (37.57%), Postives = 91/181 (50.28%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIP-AAGGGDEEKYL 63
           LPPGFRF PT+EELV  YLK K  S  LP +II E++ ++  DPWD+P  A  G++E Y 
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVD-LYKFDPWDLPEKANFGEQEWYF 88

Query: 64  FSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTNNI 123
           FS    ++ N            + SGYWKA G +K I+S+ +    +G+K  L FY    
Sbjct: 89  FSPRDRKYPNGARPNRA-----ATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKP 148

Query: 124 RKMKKTGWVMHQYRLIIPHSHSST-----------------------NKWVLCHILSPTN 161
            K  KT W+MH+YRL    S ++                        + WVLC I   TN
Sbjct: 149 PKGVKTNWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLCRIYKKTN 203

[Close]

BLAST of CSPI01G00270 vs. Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.4e-23
Identity = 71/186 (38.17%), Postives = 95/186 (51.08%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPA-AGGGDEEKYL 63
           LPPGFRF PT+EELV  YLK K  S  LP +II +++ ++  DPW++PA A  G++E Y 
Sbjct: 17  LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVD-LYKFDPWELPAKASFGEQEWYF 76

Query: 64  FSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVA-LMGMKNTLDFYTNN 123
           FS    ++ N            + SGYWKA G +K ++S   G +  +G+K  L FY+  
Sbjct: 77  FSPRDRKYPNGARPNRA-----ATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGK 136

Query: 124 IRKMKKTGWVMHQYRLI---IPHSHSSTNK--------WVLCHILSPTNKLFSHIVHPHR 177
             K  K+ W+MH+YRL      H     NK        WVLC I    N   S      R
Sbjct: 137 PPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNSTAS------R 190

[Close]

BLAST of CSPI01G00270 vs. TrEMBL
Match: A0A0A0LR52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000770 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 5.0e-135
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1


Query: 1   MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEK 60
           MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEK
Sbjct: 147 MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEK 206

Query: 61  YLFSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTN 120
           YLFSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTN
Sbjct: 207 YLFSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTN 266

Query: 121 NIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFSHIVHPHRHRRRLHCSIS 180
           NIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFSHIVHPHRHRRRLHCSIS
Sbjct: 267 NIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFSHIVHPHRHRRRLHCSIS 326

Query: 181 STKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTATTTTFH 240
           STKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTATTTTFH
Sbjct: 327 STKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTATTTTFH 386

Query: 241 F 242
           F
Sbjct: 387 F 387

[Close]

BLAST of CSPI01G00270 vs. TrEMBL
Match: B9RA97_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1504850 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 8.7e-31
Identity = 76/153 (49.67%), Postives = 99/153 (64.71%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEKYLF 63
           LPPGFRF+PT+EELVF+YLK KV S  LPASIIP+IN V   DPWD+P  G  ++E+Y F
Sbjct: 15  LPPGFRFQPTDEELVFQYLKRKVLSWPLPASIIPDIN-VCKFDPWDLP--GNTEQERYFF 74

Query: 64  SKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTNNIR 123
           S +  ++ N N      I   + SGYWKA G EK+I S+ +G  ++GMK TL FY     
Sbjct: 75  SNKESKYPNGNR-----INRATASGYWKATGLEKQIGSSSSGNHVVGMKKTLVFYRGKSP 134

Query: 124 KMKKTGWVMHQYRLIIPHSHS--STNKWVLCHI 155
              +T W+MH+YRL+   ++S     KWVLC I
Sbjct: 135 HATRTDWIMHEYRLVSAGTNSLNQLEKWVLCRI 159

[Close]

BLAST of CSPI01G00270 vs. TrEMBL
Match: A0A0B2QVX5_GLYSO (NAC domain-containing protein 29 OS=Glycine soja GN=glysoja_033946 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.7e-30
Identity = 79/162 (48.77%), Postives = 102/162 (62.96%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDE-EKYL 63
           LPPGFRF+PT+EELVF+YLKCK+FS  LPASIIPEIN V   DPWD+P  G  DE E+Y 
Sbjct: 14  LPPGFRFQPTDEELVFQYLKCKIFSCQLPASIIPEIN-VSKNDPWDLP--GNCDEQERYF 73

Query: 64  FSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTNNI 123
           FS +  ++ N N      +   + SGYWKA G +K+I S+ + +   G++ TL FY    
Sbjct: 74  FSSKEAKYRNGNR-----MNRTTNSGYWKATGSDKKISSSISNIGFAGLRKTLVFYEGKS 133

Query: 124 RKMKKTGWVMHQYRLI----IPHSHSSTN------KWVLCHI 155
               +T WVMH+YRL+    IP S+SS N       W+LC I
Sbjct: 134 PNGSRTDWVMHEYRLVSLETIP-SNSSQNYANEIGDWILCRI 166

[Close]

BLAST of CSPI01G00270 vs. TrEMBL
Match: A0A0R0JI22_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G166500 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.7e-30
Identity = 79/162 (48.77%), Postives = 102/162 (62.96%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDE-EKYL 63
           LPPGFRF+PT+EELVF+YLKCK+FS  LPASIIPEIN V   DPWD+P  G  DE E+Y 
Sbjct: 14  LPPGFRFQPTDEELVFQYLKCKIFSCQLPASIIPEIN-VSKNDPWDLP--GNCDEQERYF 73

Query: 64  FSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTNNI 123
           FS +  ++ N N      +   + SGYWKA G +K+I S+ + +   G++ TL FY    
Sbjct: 74  FSSKEAKYRNGNR-----MNRTTNSGYWKATGSDKKISSSISNIGFAGLRKTLVFYEGKS 133

Query: 124 RKMKKTGWVMHQYRLI----IPHSHSSTN------KWVLCHI 155
               +T WVMH+YRL+    IP S+SS N       W+LC I
Sbjct: 134 PNGSRTDWVMHEYRLVSLETIP-SNSSQNYANEIGDWILCRI 166

[Close]

BLAST of CSPI01G00270 vs. TrEMBL
Match: K7KVI1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.7e-30
Identity = 79/162 (48.77%), Postives = 102/162 (62.96%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDE-EKYL 63
           LPPGFRF+PT+EELVF+YLKCK+FS  LPASIIPEIN V   DPWD+P  G  DE E+Y 
Sbjct: 35  LPPGFRFQPTDEELVFQYLKCKIFSCQLPASIIPEIN-VSKNDPWDLP--GNCDEQERYF 94

Query: 64  FSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTNNI 123
           FS +  ++ N N      +   + SGYWKA G +K+I S+ + +   G++ TL FY    
Sbjct: 95  FSSKEAKYRNGNR-----MNRTTNSGYWKATGSDKKISSSISNIGFAGLRKTLVFYEGKS 154

Query: 124 RKMKKTGWVMHQYRLI----IPHSHSSTN------KWVLCHI 155
               +T WVMH+YRL+    IP S+SS N       W+LC I
Sbjct: 155 PNGSRTDWVMHEYRLVSLETIP-SNSSQNYANEIGDWILCRI 187

[Close]

BLAST of CSPI01G00270 vs. TAIR10
Match: AT2G33480.1 (AT2G33480.1 NAC domain containing protein 41)

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-25
Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEKYLF 63
           LPPGFRF PT+EELV +YL+ KV    LPAS+IPE + V   DPWD+P  G  + E Y F
Sbjct: 15  LPPGFRFHPTDEELVVQYLRRKVTGLPLPASVIPETD-VCKSDPWDLP--GDCESEMYFF 74

Query: 64  S-KEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTNNI 123
           S +EA+  N N +    G      SGYWKA G +K+I   +    ++GMK TL FY    
Sbjct: 75  STREAKYPNGNRSNRSTG------SGYWKATGLDKQIGKKK---LVVGMKKTLVFYKGKP 134

Query: 124 RKMKKTGWVMHQYRLIIPHSHS---STNKWVLCHI 155
               +T WV+H+YRL+     S       WVLC +
Sbjct: 135 PNGTRTNWVLHEYRLVDSQQDSLYGQNMNWVLCRV 157

[Close]

BLAST of CSPI01G00270 vs. TAIR10
Match: AT5G13180.1 (AT5G13180.1 NAC domain containing protein 83)

HSP 1 Score: 112.1 bits (279), Expect = 4.9e-25
Identity = 86/237 (36.29%), Postives = 117/237 (49.37%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEKYLF 63
           LPPGFRF PT+EELV +YLK KV SS LPASIIPE + V   DPWD+P  G  ++E+Y F
Sbjct: 14  LPPGFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFD-VCRADPWDLP--GNLEKERYFF 73

Query: 64  S-KEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTNNI 123
           S +EA+  N N +    G      SGYWKA G +K +V++  G  ++G+K TL FY    
Sbjct: 74  STREAKYPNGNRSNRATG------SGYWKATGIDKRVVTS-RGNQIVGLKKTLVFYKGKP 133

Query: 124 RKMKKTGWVMHQYRLII--PHSHSSTNKWVLCHILSPTNKLFSHIVHPHRHRRRLHCSIS 183
               +T W+MH+YRL    P S   T  WVLC I                        + 
Sbjct: 134 PHGSRTDWIMHEYRLSSSPPSSMGPTQNWVLCRIF-----------------------LK 193

Query: 184 STKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTATTT 238
                  D +D    ++ H   +   S D+ + +++  +   T   F DF     TT
Sbjct: 194 KRAGNKNDDDDGDSRNLRHNNNNN--SSDQIEIITTDQTDDKTKPIFFDFMRKERTT 215

[Close]

BLAST of CSPI01G00270 vs. TAIR10
Match: AT1G76420.1 (AT1G76420.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 8.4e-25
Identity = 68/179 (37.99%), Postives = 95/179 (53.07%), Query Frame = 1


Query: 2   RGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIP-AAGGGDEEK 61
           RGLPPGFRF PT+EEL+  YL  K+F   L    I E++ +   +PW++P  A  G+ E 
Sbjct: 20  RGLPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVD-LNRCEPWELPEMAKMGEREW 79

Query: 62  YLFSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTN 121
           Y +S    ++              + +GYWKA G++KE+ S   G  L+GMK TL FY  
Sbjct: 80  YFYSLRDRKYPTGLRTNRA-----TTAGYWKATGKDKEVFSGGGG-QLVGMKKTLVFYKG 139

Query: 122 NIRKMKKTGWVMHQYRLIIPHSHSSTNK--WVLCHILSPTNK------LFSHIVHPHRH 172
              +  KT WVMH+YRL   HSH  T K  WV+C + + T        + + I + H H
Sbjct: 140 RAPRGLKTKWVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDRKNVGLIHNQISYLHNH 191

[Close]

BLAST of CSPI01G00270 vs. TAIR10
Match: AT1G52880.1 (AT1G52880.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 109.0 bits (271), Expect = 4.1e-24
Identity = 71/186 (38.17%), Postives = 95/186 (51.08%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPA-AGGGDEEKYL 63
           LPPGFRF PT+EELV  YLK K  S  LP +II +++ ++  DPW++PA A  G++E Y 
Sbjct: 17  LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVD-LYKFDPWELPAKASFGEQEWYF 76

Query: 64  FSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVA-LMGMKNTLDFYTNN 123
           FS    ++ N            + SGYWKA G +K ++S   G +  +G+K  L FY+  
Sbjct: 77  FSPRDRKYPNGARPNRA-----ATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGK 136

Query: 124 IRKMKKTGWVMHQYRLI---IPHSHSSTNK--------WVLCHILSPTNKLFSHIVHPHR 177
             K  K+ W+MH+YRL      H     NK        WVLC I    N   S      R
Sbjct: 137 PPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNSTAS------R 190

[Close]

BLAST of CSPI01G00270 vs. TAIR10
Match: AT3G04060.1 (AT3G04060.1 NAC domain containing protein 46)

HSP 1 Score: 105.1 bits (261), Expect = 6.0e-23
Identity = 61/157 (38.85%), Postives = 91/157 (57.96%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPA-AGGGDEEKYL 63
           LPPGFRF PT+EE++  YLK KVF+    A+ I + + +   +PWD+P  A  G++E Y 
Sbjct: 20  LPPGFRFHPTDEEIITHYLKEKVFNIRFTAAAIGQAD-LNKNEPWDLPKIAKMGEKEFYF 79

Query: 64  FSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTNNI 123
           F +   ++          +     SGYWKA G++KEI   +    L+GMK TL FYT   
Sbjct: 80  FCQRDRKYPTGMRTNRATV-----SGYWKATGKDKEIFRGKG--CLVGMKKTLVFYTGRA 139

Query: 124 RKMKKTGWVMHQYRLIIPHSH-----SSTNKWVLCHI 155
            K +KT WVMH+YRL   +S+     ++ ++WV+C +
Sbjct: 140 PKGEKTNWVMHEYRLDGKYSYHNLPKTARDEWVVCRV 168

[Close]

BLAST of CSPI01G00270 vs. NCBI nr
Match: gi|449440516|ref|XP_004138030.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis sativus])

HSP 1 Score: 488.4 bits (1256), Expect = 7.1e-135
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1


Query: 1   MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEK 60
           MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEK
Sbjct: 2   MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEK 61

Query: 61  YLFSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTN 120
           YLFSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTN
Sbjct: 62  YLFSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTN 121

Query: 121 NIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFSHIVHPHRHRRRLHCSIS 180
           NIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFSHIVHPHRHRRRLHCSIS
Sbjct: 122 NIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFSHIVHPHRHRRRLHCSIS 181

Query: 181 STKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTATTTTFH 240
           STKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTATTTTFH
Sbjct: 182 STKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTATTTTFH 241

Query: 241 F 242
           F
Sbjct: 242 F 242

[Close]

BLAST of CSPI01G00270 vs. NCBI nr
Match: gi|700208358|gb|KGN63454.1| (hypothetical protein Csa_1G000770 [Cucumis sativus])

HSP 1 Score: 488.4 bits (1256), Expect = 7.1e-135
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1


Query: 1   MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEK 60
           MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEK
Sbjct: 147 MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEK 206

Query: 61  YLFSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTN 120
           YLFSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTN
Sbjct: 207 YLFSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTN 266

Query: 121 NIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFSHIVHPHRHRRRLHCSIS 180
           NIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFSHIVHPHRHRRRLHCSIS
Sbjct: 267 NIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFSHIVHPHRHRRRLHCSIS 326

Query: 181 STKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTATTTTFH 240
           STKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTATTTTFH
Sbjct: 327 STKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTATTTTFH 386

Query: 241 F 242
           F
Sbjct: 387 F 387

[Close]

BLAST of CSPI01G00270 vs. NCBI nr
Match: gi|659128826|ref|XP_008464389.1| (PREDICTED: NAC domain-containing protein 18-like [Cucumis melo])

HSP 1 Score: 442.6 bits (1137), Expect = 4.5e-121
Identity = 226/242 (93.39%), Postives = 232/242 (95.87%), Query Frame = 1


Query: 1   MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEK 60
           MR LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVW+LDPWDIPAAGGGDEEK
Sbjct: 2   MRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEK 61

Query: 61  YLFS-KEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYT 120
           YLFS KEAEE+NNNNNGE GGIIGWSKSGYWKARGREKEIVS+ENGVALMGMK+TLDFYT
Sbjct: 62  YLFSKKEAEEYNNNNNGE-GGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDFYT 121

Query: 121 NNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFSHIVHPHRHRRRLHCSI 180
           NNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLF HI+HPHRHRRRL  SI
Sbjct: 122 NNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSI 181

Query: 181 SSTKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTAT-TTT 240
           SSTKD NGD +DEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTST T TTT
Sbjct: 182 SSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTT 241

[Close]

BLAST of CSPI01G00270 vs. NCBI nr
Match: gi|223550237|gb|EEF51724.1| (transcription factor, putative [Ricinus communis])

HSP 1 Score: 142.1 bits (357), Expect = 1.3e-30
Identity = 76/153 (49.67%), Postives = 99/153 (64.71%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDEEKYLF 63
           LPPGFRF+PT+EELVF+YLK KV S  LPASIIP+IN V   DPWD+P  G  ++E+Y F
Sbjct: 15  LPPGFRFQPTDEELVFQYLKRKVLSWPLPASIIPDIN-VCKFDPWDLP--GNTEQERYFF 74

Query: 64  SKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTNNIR 123
           S +  ++ N N      I   + SGYWKA G EK+I S+ +G  ++GMK TL FY     
Sbjct: 75  SNKESKYPNGNR-----INRATASGYWKATGLEKQIGSSSSGNHVVGMKKTLVFYRGKSP 134

Query: 124 KMKKTGWVMHQYRLIIPHSHS--STNKWVLCHI 155
              +T W+MH+YRL+   ++S     KWVLC I
Sbjct: 135 HATRTDWIMHEYRLVSAGTNSLNQLEKWVLCRI 159

[Close]

BLAST of CSPI01G00270 vs. NCBI nr
Match: gi|356518858|ref|XP_003528094.1| (PREDICTED: NAC domain-containing protein 83 [Glycine max])

HSP 1 Score: 139.4 bits (350), Expect = 8.1e-30
Identity = 79/162 (48.77%), Postives = 102/162 (62.96%), Query Frame = 1


Query: 4   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGGDE-EKYL 63
           LPPGFRF+PT+EELVF+YLKCK+FS  LPASIIPEIN V   DPWD+P  G  DE E+Y 
Sbjct: 14  LPPGFRFQPTDEELVFQYLKCKIFSCQLPASIIPEIN-VSKNDPWDLP--GNCDEQERYF 73

Query: 64  FSKEAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKNTLDFYTNNI 123
           FS +  ++ N N      +   + SGYWKA G +K+I S+ + +   G++ TL FY    
Sbjct: 74  FSSKEAKYRNGNR-----MNRTTNSGYWKATGSDKKISSSISNIGFAGLRKTLVFYEGKS 133

Query: 124 RKMKKTGWVMHQYRLI----IPHSHSSTN------KWVLCHI 155
               +T WVMH+YRL+    IP S+SS N       W+LC I
Sbjct: 134 PNGSRTDWVMHEYRLVSLETIP-SNSSQNYANEIGDWILCRI 166

The following BLAST results are available for this feature:

BLAST of CSPI01G00270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NAC41_ARATH	2.3e-24	43.87	NAC domain-containing protein 41 OS=Arabidopsis thaliana GN=NAC041 PE=2 SV=1	[more]
NAC83_ARATH	8.7e-24	36.29	NAC domain-containing protein 83 OS=Arabidopsis thaliana GN=NAC083 PE=1 SV=1	[more]
NAC31_ARATH	1.5e-23	37.99	Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1	[more]
NAC10_ORYSJ	1.9e-23	37.57	NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2...	[more]
NAC18_ARATH	7.4e-23	38.17	NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1	[more]

BLAST of CSPI01G00270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR52_CUCSA	5.0e-135	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000770 PE=4 SV=1	[more]
B9RA97_RICCO	8.7e-31	49.67	Transcription factor, putative OS=Ricinus communis GN=RCOM_1504850 PE=4 SV=1	[more]
A0A0B2QVX5_GLYSO	5.7e-30	48.77	NAC domain-containing protein 29 OS=Glycine soja GN=glysoja_033946 PE=4 SV=1	[more]
A0A0R0JI22_SOYBN	5.7e-30	48.77	Uncharacterized protein OS=Glycine max GN=GLYMA_06G166500 PE=4 SV=1	[more]
K7KVI1_SOYBN	5.7e-30	48.77	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]

BLAST of CSPI01G00270 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33480.1	1.3e-25	43.87	NAC domain containing protein 41	[more]
AT5G13180.1	4.9e-25	36.29	NAC domain containing protein 83	[more]
AT1G76420.1	8.4e-25	37.99	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]
AT1G52880.1	4.1e-24	38.17	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]
AT3G04060.1	6.0e-23	38.85	NAC domain containing protein 46	[more]

BLAST of CSPI01G00270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449440516\|ref\|XP_004138030.1\|	7.1e-135	100.00	PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis sativus]	[more]
gi\|700208358\|gb\|KGN63454.1\|	7.1e-135	100.00	hypothetical protein Csa_1G000770 [Cucumis sativus]	[more]
gi\|659128826\|ref\|XP_008464389.1\|	4.5e-121	93.39	PREDICTED: NAC domain-containing protein 18-like [Cucumis melo]	[more]
gi\|223550237\|gb\|EEF51724.1\|	1.3e-30	49.67	transcription factor, putative [Ricinus communis]	[more]
gi\|356518858\|ref\|XP_003528094.1\|	8.1e-30	48.77	PREDICTED: NAC domain-containing protein 83 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003441	NAC-dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G00270.1	CSPI01G00270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 5..137 score: 3.6
IPR003441	NAC domain	PROFILE	PS51005	NAC	coord: 4..157 score: 3
IPR003441	NAC domain	unknown	SSF101941	NAC domain	coord: 2..155 score: 1.02
None	No IPR available	PANTHER	PTHR31719	FAMILY NOT NAMED	coord: 4..154 score: 6.8
None	No IPR available	PANTHER	PTHR31719:SF22	NAC DOMAIN CONTAINING PROTEIN 97	coord: 4..154 score: 6.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G00270	Cla019304	Watermelon (97103) v1	cpiwmB099
CSPI01G00270	Csa1G000770	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G00270	MELO3C026180	Melon (DHL92) v3.5.1	cpimeB055
CSPI01G00270	ClCG06G018160	Watermelon (Charleston Gray)	cpiwcgB083
CSPI01G00270	Lsi09G017540	Bottle gourd (USVL1VR-Ls)	cpilsiB001
CSPI01G00270	MELO3C026180.2	Melon (DHL92) v3.6.1	cpimedB049
CSPI01G00270	CsaV3_1G000260	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G00270	CsaV3_6G007920	Cucumber (Chinese Long) v3	cpicucB053
CSPI01G00270	Cla97C06G127940	Watermelon (97103) v2	cpiwmbB079
CSPI01G00270	Bhi02G000490	Wax gourd	cpiwgoB081
CSPI01G00270	Cucsa.157080	Cucumber (Gy14) v1	cgycpiB229
CSPI01G00270	CmaCh10G000370	Cucurbita maxima (Rimu)	cmacpiB049
CSPI01G00270	CmaCh11G000110	Cucurbita maxima (Rimu)	cmacpiB085
CSPI01G00270	CmoCh10G000330	Cucurbita moschata (Rifu)	cmocpiB040
CSPI01G00270	CmoCh11G000100	Cucurbita moschata (Rifu)	cmocpiB079
CSPI01G00270	Cp4.1LG04g16220	Cucurbita pepo (Zucchini)	cpecpiB656
CSPI01G00270	Cp4.1LG18g09070	Cucurbita pepo (Zucchini)	cpecpiB361
CSPI01G00270	CsGy1G000270	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G00270	Carg24557	Silver-seed gourd	carcpiB0642
CSPI01G00270	Carg10259	Silver-seed gourd	carcpiB0396

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G00270	Bottle gourd (USVL1VR-Ls)	cpilsiB041
CSPI01G00270	Bottle gourd (USVL1VR-Ls)	cpilsiB070
CSPI01G00270	Melon (DHL92) v3.6.1	cpimedB014
CSPI01G00270	Cucumber (Gy14) v2	cgybcpiB013
CSPI01G00270	Cucumber (Gy14) v2	cgybcpiB095
CSPI01G00270	Cucumber (Chinese Long) v3	cpicucB015
CSPI01G00270	Cucumber (Chinese Long) v3	cpicucB028
CSPI01G00270	Watermelon (97103) v2	cpiwmbB051
CSPI01G00270	Wax gourd	cpiwgoB061
CSPI01G00270	Wild cucumber (PI 183967)	cpicpiB003
CSPI01G00270	Wild cucumber (PI 183967)	cpicpiB014
CSPI01G00270	Cucurbita maxima (Rimu)	cmacpiB227
CSPI01G00270	Cucurbita moschata (Rifu)	cmocpiB213
CSPI01G00270	Cucurbita moschata (Rifu)	cmocpiB396
CSPI01G00270	Cucumber (Chinese Long) v2	cpicuB009
CSPI01G00270	Cucumber (Chinese Long) v2	cpicuB024
CSPI01G00270	Melon (DHL92) v3.5.1	cpimeB015
CSPI01G00270	Melon (DHL92) v3.5.1	cpimeB079
CSPI01G00270	Watermelon (Charleston Gray)	cpiwcgB053
CSPI01G00270	Watermelon (97103) v1	cpiwmB029
CSPI01G00270	Cucurbita pepo (Zucchini)	cpecpiB515