CmaCh09G012820 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G012820
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionATP synthase subunit delta, sodium ion specific
LocationCma_Chr09 : 8822951 .. 8823673 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCTTTCACCAAACCGCCGCCTCACTCCAGGCCAAACTCCTTCCAACAATCCGAATCTCCCGGACCACTCCGGCAAACCTCTCTTTCTCCGCCACTTTTCCTTCTGGAAGACTCCGCCTCGGCCAACACCGCTCTCACGGCGGCGCTAGAATGTCCGCCTCGGCTGCTGGAAGCTACGCTGCGGCGCTGGCCGAAGTCGCTGCGTCTAACAACACGCTGGATGCAACAAGCGGCGATGTCGAGAAGATCGAGAGCGTGTTCGCCGATTCGCAGGTGTTCGATTGCTTCGCGAATCCGACGATTAGCATCGAGAAGAAACTTGCGTTGGTGGATGAGATCGCGGCGTCGTCGTCTCTACTGCCGCATACGGCGAATTTCTTGAAGATCCTAGTGGACGCGAAGAGAATCGATATCGTGAAGGAGATCGTGACGGAGTTCGAATCCGTTTACAACAAAATTACGAACACGGAGCTTGCGGTGGTGAGTTCGGTTGTGCCGTTGGAGCAGCAGCATTTGGCGCAGATCGCGAAGCAGGTGCAGAAATTGAGTGGAGCTAAGAATGTGAGGATCAAGACGCAGATTGATCCGAGTCTGGTTGCTGGATTCACAGTCAGGTTTGGAAATTCTGGATCGAAACTCATTGATTTGAGCGTCAAGAAACAGCTTGAGGAAATTGCTTCTCAGCTTGATCTTGGTAATATTCAACTGGCTGTTTAA

mRNA sequence

ATGGCCGCCTTTCACCAAACCGCCGCCTCACTCCAGGCCAAACTCCTTCCAACAATCCGAATCTCCCGGACCACTCCGGCAAACCTCTCTTTCTCCGCCACTTTTCCTTCTGGAAGACTCCGCCTCGGCCAACACCGCTCTCACGGCGGCGCTAGAATGTCCGCCTCGGCTGCTGGAAGCTACGCTGCGGCGCTGGCCGAAGTCGCTGCGTCTAACAACACGCTGGATGCAACAAGCGGCGATGTCGAGAAGATCGAGAGCGTGTTCGCCGATTCGCAGGTGTTCGATTGCTTCGCGAATCCGACGATTAGCATCGAGAAGAAACTTGCGTTGGTGGATGAGATCGCGGCGTCGTCGTCTCTACTGCCGCATACGGCGAATTTCTTGAAGATCCTAGTGGACGCGAAGAGAATCGATATCGTGAAGGAGATCGTGACGGAGTTCGAATCCGTTTACAACAAAATTACGAACACGGAGCTTGCGGTGGTGAGTTCGGTTGTGCCGTTGGAGCAGCAGCATTTGGCGCAGATCGCGAAGCAGGTGCAGAAATTGAGTGGAGCTAAGAATGTGAGGATCAAGACGCAGATTGATCCGAGTCTGGTTGCTGGATTCACAGTCAGGTTTGGAAATTCTGGATCGAAACTCATTGATTTGAGCGTCAAGAAACAGCTTGAGGAAATTGCTTCTCAGCTTGATCTTGGTAATATTCAACTGGCTGTTTAA

Coding sequence (CDS)

ATGGCCGCCTTTCACCAAACCGCCGCCTCACTCCAGGCCAAACTCCTTCCAACAATCCGAATCTCCCGGACCACTCCGGCAAACCTCTCTTTCTCCGCCACTTTTCCTTCTGGAAGACTCCGCCTCGGCCAACACCGCTCTCACGGCGGCGCTAGAATGTCCGCCTCGGCTGCTGGAAGCTACGCTGCGGCGCTGGCCGAAGTCGCTGCGTCTAACAACACGCTGGATGCAACAAGCGGCGATGTCGAGAAGATCGAGAGCGTGTTCGCCGATTCGCAGGTGTTCGATTGCTTCGCGAATCCGACGATTAGCATCGAGAAGAAACTTGCGTTGGTGGATGAGATCGCGGCGTCGTCGTCTCTACTGCCGCATACGGCGAATTTCTTGAAGATCCTAGTGGACGCGAAGAGAATCGATATCGTGAAGGAGATCGTGACGGAGTTCGAATCCGTTTACAACAAAATTACGAACACGGAGCTTGCGGTGGTGAGTTCGGTTGTGCCGTTGGAGCAGCAGCATTTGGCGCAGATCGCGAAGCAGGTGCAGAAATTGAGTGGAGCTAAGAATGTGAGGATCAAGACGCAGATTGATCCGAGTCTGGTTGCTGGATTCACAGTCAGGTTTGGAAATTCTGGATCGAAACTCATTGATTTGAGCGTCAAGAAACAGCTTGAGGAAATTGCTTCTCAGCTTGATCTTGGTAATATTCAACTGGCTGTTTAA

Protein sequence

MAAFHQTAASLQAKLLPTIRISRTTPANLSFSATFPSGRLRLGQHRSHGGARMSASAAGSYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLALVDEIAASSSLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQQHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLDLGNIQLAV
Homology
[Close]
BLAST of CmaCh09G012820 vs. Swiss-Prot
Match: ATPD_ARATH (ATP synthase subunit delta, chloroplastic OS=Arabidopsis thaliana GN=ATPD PE=1 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.8e-66
Identity = 148/240 (61.67%), Postives = 184/240 (76.67%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLPT-IRISRTTPANLSFSATFPSGRLRLGQHRSHGGARMSASAAG 60
           MA+  QT  SLQ+KL P+  +I+R+ P       TFP   +R+    +  GARMSA+AA 
Sbjct: 1   MASLQQTLFSLQSKLPPSSFQIARSLPLR----KTFP---IRINNGGNAAGARMSATAAS 60

Query: 61  SYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLALVDEIAASS 120
           SYA ALA+VA  N+T++ T  D+EK+E VF+D QV + FANPTI++EKK  ++D+I  SS
Sbjct: 61  SYAMALADVAKRNDTMELTVTDIEKLEQVFSDPQVLNFFANPTITVEKKRQVIDDIVKSS 120

Query: 121 SLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQQHLAQIAK 180
           SL  HT+NFL +LVDA RI+IV EIV EFE VYNK+T+T+LA V SVV LE   LAQIAK
Sbjct: 121 SLQSHTSNFLNVLVDANRINIVTEIVKEFELVYNKLTDTQLAEVRSVVKLEAPQLAQIAK 180

Query: 181 QVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLDLGNIQLA 240
           QVQKL+GAKNVR+KT ID SLVAGFT+R+G SGSKLID+SVKKQLE+IASQL+LG IQLA
Sbjct: 181 QVQKLTGAKNVRVKTVIDASLVAGFTIRYGESGSKLIDMSVKKQLEDIASQLELGEIQLA 233

[Close]
BLAST of CmaCh09G012820 vs. Swiss-Prot
Match: ATPD_TOBAC (ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum GN=ATPD PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 9.1e-66
Identity = 145/248 (58.47%), Postives = 184/248 (74.19%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLPTIRISRTTPANLSFSA--TFPSGRLRLGQHRSH------GGAR 60
           MAA  QT  + Q++  P  +I     A LSFS     P   ++L  +R+        G++
Sbjct: 1   MAALQQTPITFQSRSPPPTQIISGPTAKLSFSGGLKLPKLTIKLRSNRTSRRGGGAAGSK 60

Query: 61  MSASAAGSYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLALV 120
           M ASAAGSYA ALA++A SN TL+ T+ D+EKIE +  D  VF+ F +P +  EKK  LV
Sbjct: 61  MVASAAGSYANALADIAKSNGTLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELV 120

Query: 121 DEIAASSSLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQQ 180
           DEI +SSS+ PH ANFL ILVD KR++++KEIV EFE VYN +T+TELAVV+SVV LE Q
Sbjct: 121 DEIVSSSSIQPHVANFLNILVDMKRVELIKEIVKEFEKVYNTLTDTELAVVTSVVKLESQ 180

Query: 181 HLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLD 240
           HLAQIAK VQ+L+G+KNVRIKT ID SLVAGFT+R+GNSGSKLID+SVKKQLE+IA+QL+
Sbjct: 181 HLAQIAKGVQRLTGSKNVRIKTVIDESLVAGFTIRYGNSGSKLIDMSVKKQLEDIAAQLE 240

[Close]
BLAST of CmaCh09G012820 vs. Swiss-Prot
Match: ATPD_PEA (ATP synthase delta chain, chloroplastic OS=Pisum sativum GN=ATPD PE=1 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.9e-63
Identity = 145/252 (57.54%), Postives = 186/252 (73.81%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLP--TIRISRTTPANLSFSATFPSGRLRLG-------QHRSHGGA 60
           MA+   T ASL +K +P  T  ++R    NLS S+TF S +L+L          RS GGA
Sbjct: 1   MASLQHTTASLHSKHIPKTTNILTRKPILNLS-SSTFYSPKLKLKLKLPLTKTRRSTGGA 60

Query: 61  ---RMSASAAGSYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKK 120
              RMS+ AAGSYAAALA++A SNNTLDA + D +KIE +F+D +VFD F++P +    K
Sbjct: 61  LGARMSSLAAGSYAAALADLANSNNTLDAITADFDKIEQLFSDPKVFDYFSSPIVEDSTK 120

Query: 121 LALVDEIAASSSLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVP 180
             L+ E A +S   PHT NFL +L+D+KRID++ +I+ EFE VYN +T+TEL VV+SVV 
Sbjct: 121 RQLIGEFATTSGFQPHTHNFLNVLIDSKRIDMIIDIIKEFEFVYNTLTDTELVVVTSVVK 180

Query: 181 LEQQHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIA 240
           LE  HLAQIAKQVQKL+GAK VR KT +DPSLVAGFTVR+GN+GSK ID+SVK++LEEIA
Sbjct: 181 LESHHLAQIAKQVQKLTGAKKVRTKTLLDPSLVAGFTVRYGNTGSKFIDMSVKRKLEEIA 240

[Close]
BLAST of CmaCh09G012820 vs. Swiss-Prot
Match: ATPD_SPIOL (ATP synthase delta chain, chloroplastic OS=Spinacia oleracea GN=ATPD PE=1 SV=2)

HSP 1 Score: 227.6 bits (579), Expect = 1.4e-58
Identity = 136/249 (54.62%), Postives = 177/249 (71.08%), Query Frame = 1 

Query: 3   AFHQTAASLQAKLLPTIRISRTTPANLSFS---ATFPSGRLRLGQH-----RSHGGA--- 62
           A      +  A L  +   S   P +LSFS   ATF   RL++        +  GGA   
Sbjct: 9   ALQSRTTTAVAALSTSSTTSTPKPFSLSFSSSTATFNPLRLKILTASKLTAKPRGGALGT 68

Query: 63  RMSASAAGSYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLAL 122
           RM  S A  YA+ALA+VA    TL+AT+ DVEK+  +F++  V+  FANP ISI+ K ++
Sbjct: 69  RMVDSTASRYASALADVADVTGTLEATNSDVEKLIRIFSEEPVYYFFANPVISIDNKRSV 128

Query: 123 VDEIAASSSLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQ 182
           +DEI  +S L PHTANF+ IL+D++RI++VKEI+ EFE V+NKIT TE+AVV+SVV LE 
Sbjct: 129 LDEIITTSGLQPHTANFINILIDSERINLVKEILNEFEDVFNKITGTEVAVVTSVVKLEN 188

Query: 183 QHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQL 241
            HLAQIAK VQK++GAKNVRIKT IDPSLVAGFT+R+GN GSKL+D+SVKKQLEEIA+QL
Sbjct: 189 DHLAQIAKGVQKITGAKNVRIKTVIDPSLVAGFTIRYGNEGSKLVDMSVKKQLEEIAAQL 248

[Close]
BLAST of CmaCh09G012820 vs. Swiss-Prot
Match: ATPD_SORBI (ATP synthase delta chain, chloroplastic OS=Sorghum bicolor GN=ATPD PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.1e-50
Identity = 111/218 (50.92%), Postives = 152/218 (69.72%), Query Frame = 1 

Query: 26  PANLSFSAT---FPSGRLRLGQHRSHGGARMSASAAGSYAAALAEVAASNNTLDATSGDV 85
           P + SF+      PS RL   + R       + +AA SYA+AL+EVA  N TL+ T  D+
Sbjct: 30  PRSASFARAARGLPSLRLAPPRRRGDLVRPRAEAAADSYASALSEVAVENGTLEQTVSDL 89

Query: 86  EKIESVFADSQVFDCFANPTISIEKKLALVDEIAASSSLLPHTANFLKILVDAKRIDIVK 145
           EK++ +FAD  V + F NPT+  E+K AL+DEIA S  L PH  NF+ ++VD  R  I+ 
Sbjct: 90  EKLQKIFADETVAEFFDNPTVPREEKTALIDEIAKSYELQPHVVNFINVVVDNFRATILP 149

Query: 146 EIVTEFESVYNKITNTELAVVSSVVPLEQQHLAQIAKQVQKLSGAKNVRIKTQIDPSLVA 205
           EIV EFE+++N +T TE+A V+SVV LE Q LAQIA+ VQK++GAKNVR+KTQ+DP L+A
Sbjct: 150 EIVVEFENIFNSLTGTEVATVTSVVQLESQDLAQIAQHVQKMTGAKNVRLKTQLDPELIA 209

Query: 206 GFTVRFGNSGSKLIDLSVKKQLEEIASQLDLGNIQLAV 241
           GFTV++G  GS LID+SV+KQ+EEI S+ +L ++ L V
Sbjct: 210 GFTVQYGRDGSSLIDMSVRKQIEEITSEFELPDVPLEV 247

[Close]
BLAST of CmaCh09G012820 vs. TrEMBL
Match: A0A0A0K7Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016970 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 6.3e-106
Identity = 217/240 (90.42%), Postives = 226/240 (94.17%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLPTIRISRTTPANLSFSATFPSGRLRLGQHRSHGGARMSASAAGS 60
           MAA HQT ASLQAKLLPT RISRTTP NLSFSATFPS  LRL QHRSHGGARMSA+AAGS
Sbjct: 1   MAALHQTTASLQAKLLPTARISRTTPVNLSFSATFPSRGLRLVQHRSHGGARMSATAAGS 60

Query: 61  YAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLALVDEIAASSS 120
           YAAALAEVAASNNTLDATS DVEKIESVFAD +VFD FANPTIS+EKK A+VDE+A+SSS
Sbjct: 61  YAAALAEVAASNNTLDATSSDVEKIESVFADQRVFDFFANPTISVEKKQAVVDEMASSSS 120

Query: 121 LLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQQHLAQIAKQ 180
           L PH+ANFLKILVDAKRIDI+KEIVTEFE VYNKITNTELAVVSSVV LEQQHLAQIAKQ
Sbjct: 121 LQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQ 180

Query: 181 VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLDLGNIQLAV 240
           VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIA+QLDLGNIQLAV
Sbjct: 181 VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV 240

[Close]
BLAST of CmaCh09G012820 vs. TrEMBL
Match: A0A061F8S8_THECC (ATP synthase delta-subunit protein OS=Theobroma cacao GN=TCM_032365 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.7e-82
Identity = 176/242 (72.73%), Postives = 206/242 (85.12%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLPTIRISRTTPA-NLSFSATFPSGRLRLGQHRS-HGGARMSASAA 60
           MA+F QT+ SLQ+KLLP+ ++ R  P+ NLSFSATFPS  L+L   R   GGA+MSA+AA
Sbjct: 1   MASFQQTSISLQSKLLPSSQLPRALPSLNLSFSATFPS--LKLSTTRPLQGGAKMSATAA 60

Query: 61  GSYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLALVDEIAAS 120
            SYA ALA+VA SNNTLD+TS D+E++E +F+D QV D FANPTI   KK  ++D+I  S
Sbjct: 61  SSYALALADVAKSNNTLDSTSSDIEQVEKIFSDPQVIDFFANPTIDAIKKRQVLDDIVKS 120

Query: 121 SSLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQQHLAQIA 180
           S L PHTANFL ILVDAKRIDI+KEIV EFESV+NK+T+TELAVVSSVVPLE QHLAQIA
Sbjct: 121 SGLQPHTANFLNILVDAKRIDIIKEIVKEFESVFNKLTDTELAVVSSVVPLESQHLAQIA 180

Query: 181 KQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLDLGNIQL 240
           KQVQKL+GAKNVRIKT IDPSLVAGFT+R+GNSGSKLID+SVKKQLEEIA+QLDLG+IQL
Sbjct: 181 KQVQKLTGAKNVRIKTAIDPSLVAGFTIRYGNSGSKLIDMSVKKQLEEIAAQLDLGDIQL 240

[Close]
BLAST of CmaCh09G012820 vs. TrEMBL
Match: A0A0D2NHU9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G037600 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.7e-79
Identity = 173/242 (71.49%), Postives = 201/242 (83.06%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLPTIRISRTTPA-NLSFSATFPSGRLRLGQHRS-HGGARMSASAA 60
           MA+  Q + SLQ KLL + +  R+ P+ NLSFSATFPS  L+L   R  HGGA+MSASAA
Sbjct: 1   MASLQQASISLQPKLLSSSQHPRSLPSLNLSFSATFPS--LKLSTTRPLHGGAKMSASAA 60

Query: 61  GSYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLALVDEIAAS 120
            SYA ALA+VA SNNTLDATS DVEK+E +F+D QV   F NPTI + KK  ++DEI +S
Sbjct: 61  SSYATALADVAKSNNTLDATSSDVEKVEKIFSDPQVLQFFTNPTIDVLKKRQVLDEIVSS 120

Query: 121 SSLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQQHLAQIA 180
           S L PHTANFL ILVDAKRID++KEIV EFE VYN++T+TELAVVSSVV LE QHLAQIA
Sbjct: 121 SELQPHTANFLNILVDAKRIDLIKEIVKEFELVYNELTDTELAVVSSVVKLESQHLAQIA 180

Query: 181 KQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLDLGNIQL 240
           KQVQKL+GAKNVRIKT IDPSLVAGFT+R+G+SGSKLID+SVKKQLEEIA+QLDLG+IQL
Sbjct: 181 KQVQKLTGAKNVRIKTMIDPSLVAGFTIRYGSSGSKLIDMSVKKQLEEIAAQLDLGDIQL 240

[Close]
BLAST of CmaCh09G012820 vs. TrEMBL
Match: A0A067JS97_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01954 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.9e-78
Identity = 173/247 (70.04%), Postives = 202/247 (81.78%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLPTIRISRTT----PANLSFSATFPSGRLR-LGQHRSHGG----A 60
           MAA   T  SLQ+K+ P+ R+S+T     P +LSFS+TFPS  L     HR+ GG    A
Sbjct: 1   MAALQNTPISLQSKIPPSARLSKTLSSQKPLSLSFSSTFPSFNLSSTTAHRARGGGATGA 60

Query: 61  RMSASAAGSYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLAL 120
           +MSA+AA SYAAALA+VA SNNTLD+T+ D+EKIE +F+D QV D F+NPTIS+EKK  +
Sbjct: 61  KMSATAAASYAAALADVAKSNNTLDSTAADIEKIEKLFSDPQVVDFFSNPTISVEKKREV 120

Query: 121 VDEIAASSSLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQ 180
           VDEIA S +L PHTANFL IL+DAKRID+ KEIV EFE VYNKIT+TELA V+SVV LE 
Sbjct: 121 VDEIAKSLALQPHTANFLNILIDAKRIDLAKEIVKEFELVYNKITDTELATVTSVVKLES 180

Query: 181 QHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQL 239
           QHLAQIAKQVQKL+GAKNVRIKT IDPSLVAGFTVRFG+SGSKLIDLSVKKQLEEIA+QL
Sbjct: 181 QHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTVRFGSSGSKLIDLSVKKQLEEIAAQL 240

[Close]
BLAST of CmaCh09G012820 vs. TrEMBL
Match: A0A059BZG6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04149 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 2.7e-77
Identity = 168/246 (68.29%), Postives = 199/246 (80.89%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLPTIRISRT-TPANLSFSATFPS-----GRLRLGQHRSHGGARMS 60
           MAA  Q   SLQ+K+ P+++      P+NLSFSATFPS       L L    +  GARMS
Sbjct: 1   MAALQQIPISLQSKI-PSLKTQFLHKPSNLSFSATFPSLKLAPAHLHLRPSSAASGARMS 60

Query: 61  ASAAGSYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLALVDE 120
           A+A GSYAAALA+VA SNNTLDATS DVEKIE +F+D  VF  F+NPT+ +EKK  +VDE
Sbjct: 61  ATAGGSYAAALADVAKSNNTLDATSADVEKIEKIFSDEGVFKFFSNPTVDLEKKRGMVDE 120

Query: 121 IAASSSLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQQHL 180
           I+ASS L PHTANFL IL++AKRID++K+IV EFE VYN++T TELA+VSSVV LE QHL
Sbjct: 121 ISASSGLQPHTANFLNILIEAKRIDLIKDIVKEFEMVYNRLTETELALVSSVVKLEPQHL 180

Query: 181 AQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLDLG 240
           AQIAKQVQKL+GAKNVRIKT IDPSLVAGFT+R+G+SGSKLID+SVKKQLE+IA QLDLG
Sbjct: 181 AQIAKQVQKLTGAKNVRIKTAIDPSLVAGFTIRYGSSGSKLIDMSVKKQLEDIAEQLDLG 240

[Close]
BLAST of CmaCh09G012820 vs. TAIR10
Match: AT4G09650.1 (AT4G09650.1 ATP synthase delta-subunit gene)

HSP 1 Score: 253.8 bits (647), Expect = 1.0e-67
Identity = 148/240 (61.67%), Postives = 184/240 (76.67%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLPT-IRISRTTPANLSFSATFPSGRLRLGQHRSHGGARMSASAAG 60
           MA+  QT  SLQ+KL P+  +I+R+ P       TFP   +R+    +  GARMSA+AA 
Sbjct: 1   MASLQQTLFSLQSKLPPSSFQIARSLPLR----KTFP---IRINNGGNAAGARMSATAAS 60

Query: 61  SYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLALVDEIAASS 120
           SYA ALA+VA  N+T++ T  D+EK+E VF+D QV + FANPTI++EKK  ++D+I  SS
Sbjct: 61  SYAMALADVAKRNDTMELTVTDIEKLEQVFSDPQVLNFFANPTITVEKKRQVIDDIVKSS 120

Query: 121 SLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQQHLAQIAK 180
           SL  HT+NFL +LVDA RI+IV EIV EFE VYNK+T+T+LA V SVV LE   LAQIAK
Sbjct: 121 SLQSHTSNFLNVLVDANRINIVTEIVKEFELVYNKLTDTQLAEVRSVVKLEAPQLAQIAK 180

Query: 181 QVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLDLGNIQLA 240
           QVQKL+GAKNVR+KT ID SLVAGFT+R+G SGSKLID+SVKKQLE+IASQL+LG IQLA
Sbjct: 181 QVQKLTGAKNVRVKTVIDASLVAGFTIRYGESGSKLIDMSVKKQLEDIASQLELGEIQLA 233

[Close]
BLAST of CmaCh09G012820 vs. NCBI nr
Match: gi|659126215|ref|XP_008463069.1| (PREDICTED: ATP synthase delta chain, chloroplastic [Cucumis melo])

HSP 1 Score: 395.6 bits (1015), Expect = 6.2e-107
Identity = 219/240 (91.25%), Postives = 227/240 (94.58%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLPTIRISRTTPANLSFSATFPSGRLRLGQHRSHGGARMSASAAGS 60
           MAA HQTAASLQAKLLPT RISRTTP NLSFSATFPS  LRLGQHRSHGGARMSA+AAGS
Sbjct: 1   MAALHQTAASLQAKLLPTARISRTTPVNLSFSATFPSRGLRLGQHRSHGGARMSATAAGS 60

Query: 61  YAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLALVDEIAASSS 120
           YAAALAEVAASNNTLDATS DVEKIESVFAD QV D F+NPTIS+EKK A+VDEIA+SSS
Sbjct: 61  YAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEIASSSS 120

Query: 121 LLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQQHLAQIAKQ 180
           L PH+ANFLKILVDAKRIDI+KEIVTEFE VYNKITNTELAVVSSVV LEQQHLAQIAKQ
Sbjct: 121 LQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQ 180

Query: 181 VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLDLGNIQLAV 240
           VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIA+QLDLGNIQLAV
Sbjct: 181 VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV 240

[Close]
BLAST of CmaCh09G012820 vs. NCBI nr
Match: gi|449441205|ref|XP_004138373.1| (PREDICTED: ATP synthase subunit delta, chloroplastic [Cucumis sativus])

HSP 1 Score: 391.7 bits (1005), Expect = 9.0e-106
Identity = 217/240 (90.42%), Postives = 226/240 (94.17%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLPTIRISRTTPANLSFSATFPSGRLRLGQHRSHGGARMSASAAGS 60
           MAA HQT ASLQAKLLPT RISRTTP NLSFSATFPS  LRL QHRSHGGARMSA+AAGS
Sbjct: 1   MAALHQTTASLQAKLLPTARISRTTPVNLSFSATFPSRGLRLVQHRSHGGARMSATAAGS 60

Query: 61  YAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLALVDEIAASSS 120
           YAAALAEVAASNNTLDATS DVEKIESVFAD +VFD FANPTIS+EKK A+VDE+A+SSS
Sbjct: 61  YAAALAEVAASNNTLDATSSDVEKIESVFADQRVFDFFANPTISVEKKQAVVDEMASSSS 120

Query: 121 LLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQQHLAQIAKQ 180
           L PH+ANFLKILVDAKRIDI+KEIVTEFE VYNKITNTELAVVSSVV LEQQHLAQIAKQ
Sbjct: 121 LQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQ 180

Query: 181 VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLDLGNIQLAV 240
           VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIA+QLDLGNIQLAV
Sbjct: 181 VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV 240

[Close]
BLAST of CmaCh09G012820 vs. NCBI nr
Match: gi|590611778|ref|XP_007022200.1| (ATP synthase delta-subunit gene [Theobroma cacao])

HSP 1 Score: 313.9 bits (803), Expect = 2.4e-82
Identity = 176/242 (72.73%), Postives = 206/242 (85.12%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLPTIRISRTTPA-NLSFSATFPSGRLRLGQHRS-HGGARMSASAA 60
           MA+F QT+ SLQ+KLLP+ ++ R  P+ NLSFSATFPS  L+L   R   GGA+MSA+AA
Sbjct: 1   MASFQQTSISLQSKLLPSSQLPRALPSLNLSFSATFPS--LKLSTTRPLQGGAKMSATAA 60

Query: 61  GSYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLALVDEIAAS 120
            SYA ALA+VA SNNTLD+TS D+E++E +F+D QV D FANPTI   KK  ++D+I  S
Sbjct: 61  SSYALALADVAKSNNTLDSTSSDIEQVEKIFSDPQVIDFFANPTIDAIKKRQVLDDIVKS 120

Query: 121 SSLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQQHLAQIA 180
           S L PHTANFL ILVDAKRIDI+KEIV EFESV+NK+T+TELAVVSSVVPLE QHLAQIA
Sbjct: 121 SGLQPHTANFLNILVDAKRIDIIKEIVKEFESVFNKLTDTELAVVSSVVPLESQHLAQIA 180

Query: 181 KQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLDLGNIQL 240
           KQVQKL+GAKNVRIKT IDPSLVAGFT+R+GNSGSKLID+SVKKQLEEIA+QLDLG+IQL
Sbjct: 181 KQVQKLTGAKNVRIKTAIDPSLVAGFTIRYGNSGSKLIDMSVKKQLEEIAAQLDLGDIQL 240

[Close]
BLAST of CmaCh09G012820 vs. NCBI nr
Match: gi|823130593|ref|XP_012453807.1| (PREDICTED: ATP synthase subunit delta, chloroplastic [Gossypium raimondii])

HSP 1 Score: 303.9 bits (777), Expect = 2.5e-79
Identity = 173/242 (71.49%), Postives = 201/242 (83.06%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLPTIRISRTTPA-NLSFSATFPSGRLRLGQHRS-HGGARMSASAA 60
           MA+  Q + SLQ KLL + +  R+ P+ NLSFSATFPS  L+L   R  HGGA+MSASAA
Sbjct: 1   MASLQQASISLQPKLLSSSQHPRSLPSLNLSFSATFPS--LKLSTTRPLHGGAKMSASAA 60

Query: 61  GSYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLALVDEIAAS 120
            SYA ALA+VA SNNTLDATS DVEK+E +F+D QV   F NPTI + KK  ++DEI +S
Sbjct: 61  SSYATALADVAKSNNTLDATSSDVEKVEKIFSDPQVLQFFTNPTIDVLKKRQVLDEIVSS 120

Query: 121 SSLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQQHLAQIA 180
           S L PHTANFL ILVDAKRID++KEIV EFE VYN++T+TELAVVSSVV LE QHLAQIA
Sbjct: 121 SELQPHTANFLNILVDAKRIDLIKEIVKEFELVYNELTDTELAVVSSVVKLESQHLAQIA 180

Query: 181 KQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLDLGNIQL 240
           KQVQKL+GAKNVRIKT IDPSLVAGFT+R+G+SGSKLID+SVKKQLEEIA+QLDLG+IQL
Sbjct: 181 KQVQKLTGAKNVRIKTMIDPSLVAGFTIRYGSSGSKLIDMSVKKQLEEIAAQLDLGDIQL 240

[Close]
BLAST of CmaCh09G012820 vs. NCBI nr
Match: gi|802761111|ref|XP_012089674.1| (PREDICTED: ATP synthase subunit delta, chloroplastic [Jatropha curcas])

HSP 1 Score: 300.4 bits (768), Expect = 2.7e-78
Identity = 173/247 (70.04%), Postives = 202/247 (81.78%), Query Frame = 1 

Query: 1   MAAFHQTAASLQAKLLPTIRISRTT----PANLSFSATFPSGRLR-LGQHRSHGG----A 60
           MAA   T  SLQ+K+ P+ R+S+T     P +LSFS+TFPS  L     HR+ GG    A
Sbjct: 1   MAALQNTPISLQSKIPPSARLSKTLSSQKPLSLSFSSTFPSFNLSSTTAHRARGGGATGA 60

Query: 61  RMSASAAGSYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLAL 120
           +MSA+AA SYAAALA+VA SNNTLD+T+ D+EKIE +F+D QV D F+NPTIS+EKK  +
Sbjct: 61  KMSATAAASYAAALADVAKSNNTLDSTAADIEKIEKLFSDPQVVDFFSNPTISVEKKREV 120

Query: 121 VDEIAASSSLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQ 180
           VDEIA S +L PHTANFL IL+DAKRID+ KEIV EFE VYNKIT+TELA V+SVV LE 
Sbjct: 121 VDEIAKSLALQPHTANFLNILIDAKRIDLAKEIVKEFELVYNKITDTELATVTSVVKLES 180

Query: 181 QHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQL 239
           QHLAQIAKQVQKL+GAKNVRIKT IDPSLVAGFTVRFG+SGSKLIDLSVKKQLEEIA+QL
Sbjct: 181 QHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTVRFGSSGSKLIDLSVKKQLEEIAAQL 240

The following BLAST results are available for this feature:
BLAST of CmaCh09G012820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATPD_ARATH1.8e-6661.67ATP synthase subunit delta, chloroplastic OS=Arabidopsis thaliana GN=ATPD PE=1 S... [more]
ATPD_TOBAC9.1e-6658.47ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum GN=ATPD PE=2 SV=1[more]
ATPD_PEA1.9e-6357.54ATP synthase delta chain, chloroplastic OS=Pisum sativum GN=ATPD PE=1 SV=1[more]
ATPD_SPIOL1.4e-5854.62ATP synthase delta chain, chloroplastic OS=Spinacia oleracea GN=ATPD PE=1 SV=2[more]
ATPD_SORBI3.1e-5050.92ATP synthase delta chain, chloroplastic OS=Sorghum bicolor GN=ATPD PE=2 SV=1[more]
BLAST of CmaCh09G012820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7Z3_CUCSA6.3e-10690.42Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016970 PE=3 SV=1[more]
A0A061F8S8_THECC1.7e-8272.73ATP synthase delta-subunit protein OS=Theobroma cacao GN=TCM_032365 PE=3 SV=1[more]
A0A0D2NHU9_GOSRA1.7e-7971.49Uncharacterized protein OS=Gossypium raimondii GN=B456_002G037600 PE=3 SV=1[more]
A0A067JS97_JATCU1.9e-7870.04Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01954 PE=3 SV=1[more]
A0A059BZG6_EUCGR2.7e-7768.29Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04149 PE=3 SV=1[more]
BLAST of CmaCh09G012820 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G09650.11.0e-6761.67 ATP synthase delta-subunit gene[more]
BLAST of CmaCh09G012820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659126215|ref|XP_008463069.1|6.2e-10791.25PREDICTED: ATP synthase delta chain, chloroplastic [Cucumis melo][more]
gi|449441205|ref|XP_004138373.1|9.0e-10690.42PREDICTED: ATP synthase subunit delta, chloroplastic [Cucumis sativus][more]
gi|590611778|ref|XP_007022200.1|2.4e-8272.73ATP synthase delta-subunit gene [Theobroma cacao][more]
gi|823130593|ref|XP_012453807.1|2.5e-7971.49PREDICTED: ATP synthase subunit delta, chloroplastic [Gossypium raimondii][more]
gi|802761111|ref|XP_012089674.1|2.7e-7870.04PREDICTED: ATP synthase subunit delta, chloroplastic [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000711ATPase_OSCP/dsu
IPR020781ATPase_OSCP/d_CS
IPR026015ATP_synth_OSCP/delta_N_sf
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0042742 defense response to bacterium
biological_process GO:0044802 single-organism membrane organization
biological_process GO:0007165 signal transduction
biological_process GO:0009735 response to cytokinin
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0009772 photosynthetic electron transport in photosystem II
biological_process GO:0031347 regulation of defense response
biological_process GO:0032787 monocarboxylic acid metabolic process
biological_process GO:0019682 glyceraldehyde-3-phosphate metabolic process
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0051186 cofactor metabolic process
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0071310 cellular response to organic substance
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0009409 response to cold
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010287 plastoglobule
cellular_component GO:0045259 proton-transporting ATP synthase complex
cellular_component GO:0010319 stromule
cellular_component GO:0016020 membrane
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G012820.1CmaCh09G012820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000711ATPase, OSCP/delta subunitPRINTSPR00125ATPASEDELTAcoord: 137..151
score: 1.1E-23coord: 206..224
score: 1.1E-23coord: 188..203
score: 1.1E-23coord: 57..76
score: 1.1E-23coord: 126..137
score: 1.1
IPR000711ATPase, OSCP/delta subunitHAMAPMF_01416ATP_synth_delta_bactcoord: 53..233
score: 17
IPR000711ATPase, OSCP/delta subunitPANTHERPTHR11910ATP SYNTHASE DELTA CHAINcoord: 56..235
score: 7.6
IPR000711ATPase, OSCP/delta subunitPFAMPF00213OSCPcoord: 58..231
score: 1.6
IPR000711ATPase, OSCP/delta subunitTIGRFAMsTIGR01145TIGR01145coord: 58..231
score: 1.4
IPR020781ATPase, OSCP/delta subunit, conserved sitePROSITEPS00389ATPASE_DELTAcoord: 190..209
scor
IPR026015F1F0 ATP synthase OSCP/delta subunit, N-terminal domainGENE3DG3DSA:1.10.520.20coord: 58..154
score: 2.8
IPR026015F1F0 ATP synthase OSCP/delta subunit, N-terminal domainunknownSSF47928N-terminal domain of the delta subunit of the F1F0-ATP synthasecoord: 55..157
score: 2.62
NoneNo IPR availablePANTHERPTHR11910:SF7F-TYPE H+-TRANSPORTING ATPASE SUBUNIT DELTAcoord: 56..235
score: 7.6