CmaCh09G012500 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G012500
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Rieske domain containing protein
Location	Cma_Chr09 : 8368964 .. 8372357 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGACCCTTTCCTGTTATCCATTTCATGTGGTCTATGGCAAATCCTCCATTTTCTCTCTCTAAATCCCTCTCTCTCTCTCCTCCCCTGCTTCTTCTCTCACTGTCATTCACCTCCTCCATTCCCCTTCCACTTCCACCTCCCAATGGCCGTCAATTCCACTAACCTCACTTCCCATTTTGCCCTCCCTTTCCGCCGGACCCACCCGATCTCCTCCCCATGCACCGCCGCCCTTCCCATTCTCAAACCCGGCCTTCGTCGTTCCCTTTTCGCCTCTCCTCCTTCCGGTCCCCGGAAAATCTTGTGCAAAGCGTCGGAGGTCTCGGTGGCTGAGGAATCGTCGGCGTCTGGTAACTGGGTGCCCGTGGTTCCGTTGTCGGCGCTGCCGAAAGGGGAGCGGCGCGTGATTATTCAGGGTGGGGAGACGGTTTTGCTGCTTTGGTATAAGGAGAAGATTTTTGCTATTGAGAATCGGTCCCCTGCTGAAGGTGCTTACACTGAAGGTCTCCTTAATGCCAAACTCACTAAGGTTAATTTCATTTCCTCTGTTTCTTCTTTTCTTGTGACTGTCAGAATTGTAGAATTATCTGAATTCTGCCGTTGTTTCATATGATTCATAGAGAATAACTGTGATGATTTCCGAATTGGGGAGGACATATTTTCCTGATTTAGAGAAGATTAGGTTCGTTATTGCATCAAAGACGGTTAGGAATCACGAATCTCCACGATAGTATGATATTGTCCACTTTGAGTATAAGTTCTCACGGCTTTGTTTTTGGTTTCCCCATAAGGCTTCGTACCAATGGAGATGTATTACTTACTTATAAACCTAGGATCGTTTTCTTAATTAGTTAATGTGGGACTCCCTCACAACCATACTCCTCTTGAACAAAGTATACCATAGAGCTTTCCTTGAGGCCTATGGAGTCCTCGAATAGTCTCCCCTTAATTGAGGCTCGACTCCTTTCTCTGGAGCACTCGAACAAAGTACACCATTTGTTCGACACTTGAGTCACTTTTGACTACACTTTCGAGTGTCCCAATTTCTTTGTTCGGTATTTGAGGATTCTGTTGACATGGCTAAGTTAAGGGCATGACTCTCATACCATGTTAGGAATCACGAATCTTCATAATTGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTACTTTTGGTTTCCCCAAAAGGCCTTATACGAAGGGAGATGTATTCCCTACTTATAAATCCATGATCATTCCCTTAATTAGCCAATGTGGGAGCCCTCGAACGAAGTACACTATTTATTCGACACTTGAGTCACTTTTGACTACACTTTCGAGGGTCCCAATTTCTTTGTTTGACATTTGAAGATTCTATTGGCATAGCTAAGTTAAGGGCATGACTACGATGTCATGTTAGGAATCACGAATCTCCACAATGATATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCGTTTGGTTTTCCCAAAGGGCCTCATACTAATGGAGATGTATTCCTTACTTCAAAAAGGGCCTCATACTAATGGAGATGTATTCCTTATTTATAAACCCATGATCATTCCATTAATTAGCCGATCATTCCCTTAATTAACCAATATGGAACTCCCTTCTAACCATCCTCAATATGGACAATAGATTCCTTTTCTTCTTTTACAATGGTACGATAGAGTCAATTGGATCAAGCTCGATTTCACCTAAACACCAAATAGAATGGAAATGTTCAACTCCTTACGGCTGGATAGATAAAACTTTGGTTCTTACTCATTCAAATTGACTGTTGGGCTTCAATGTTCTTCATATTTATCAGCATTTCAGTTTTTGAAACTAGAATAAGTTCTAATGCTTGCAATGTAGAACACTTCATTGAATGATCATACCCTTTCTCTACTCAGGATGGCTGTATTGTCTGTCCAACGACAGATAGCACATTTGACCTCCAAACTGGAGACATCAAGGAATGGTATCCAAACAATCCTGTCCTCAGAGTCCTCACACCAGCCTTAAGGAAGCTTTTTGTATACCCTGTAAAAACTGATGAAAACAACATCTATATCAACATGAGAGGAAACGTGATATCAGATTCATCTGCTGAGATTGTCTTCAGTGGGAAAGCTCAACCCGGTGTAACTGCTACCGATGTCAATGTCGATGAGGTAACTATGGAATTGTTTAGTCGAACGTATTCTGTTTTTTTGTCGATAGTTTTCTTCGGTTCTTGAACTTCTACTTTGTGTTATGTCCATGTCGACGAGGTAACTATGGAATGGTTTAGTTGAACGTATTCTGTTTTTTTGCTGATAGTTTTCTTTAGTTCTTGAACTTCTACTTTGTGTTATGTCTATGTTACCGTCGAACATATTCTATTATTTTGCCGATAGTTTTCTTCAGTCCTTGAACTTCTCCTTTGTGTTATGTCCATGTCGACGAGGTAACTATGGAATGATTTAGTCGAACATATTCTGTTTTTTTGCGGATAGTTTTCTTCAGTTCTTGAACTTCTACCTTGTGTTATGTTCATGTCGACGAGGCAACTATGGAATTGTTTAGTCGAACGTATTCTATTTTTTTGCCAATAGTTTTCTTCCGTTCTTGAACTTCTACCTTGTGTTATATTGATCGACAAGGTAACTATGGAATTGTTGAGTTTGTTTAGTCGAACGTATTTTGTTTTTTTTTTGCCAATAGTTTTCTTCCGTTCTTGAACTTCTACCCTTGTGTTATGTTCATGTCGACGAGGTAACTATGGAATGGTTTAGTCGAACGTATTCTGTTTTTTTGCGGATAGTTTTCTTCTGTTCTTGAACTTCTACCCTTGTGTTATGTTGAAGGTGAAAATGGTGGTTGATGAAGAACTTGAAGGGTTTGGCTTCACTGGAAAGAATGAAGTAATAAATGGAAAGGCAGCAGTGATTGGGTTCTTGTTGTTGTTGGATTTTGAGCTCTTAACTGGGAAGGGTCTTCTCAAGGGAACTGGATTCTTGGACTTCATTTATTCTGCTTCAGATGCTTTCAAATAGATGTAAGTTCATATTCTCTTCTGCCTTGGGAAATGATATCATATCTGTTCTTGTATACTATATACAATAGCAACAAAATAGATGCTTTTTTTGAACCAAAAAATTGTGCCCATCTTTTATTGAAGTTTACAGATGAACTCGACTCAGAAAACGTACTGTTTATTCAACTGATAATCAGATCAAAACATTCATTAACAACATTCTATAGGAAAACTTGTGATTTCATTCCAGCTTCTGGGCCTGTAGGCTTTGTGGTGAGTTAGGGGCAAGTAGTAGTCGTCTAGGCGACGCTCCCTCCAAAACCAGCCTCCCGCTCCCGCTCCCGCTCCCACTGGCTTCATATACGGGCATTCCCGTCCC

mRNA sequence

ATTGACCCTTTCCTGTTATCCATTTCATGTGGTCTATGGCAAATCCTCCATTTTCTCTCTCTAAATCCCTCTCTCTCTCTCCTCCCCTGCTTCTTCTCTCACTGTCATTCACCTCCTCCATTCCCCTTCCACTTCCACCTCCCAATGGCCGTCAATTCCACTAACCTCACTTCCCATTTTGCCCTCCCTTTCCGCCGGACCCACCCGATCTCCTCCCCATGCACCGCCGCCCTTCCCATTCTCAAACCCGGCCTTCGTCGTTCCCTTTTCGCCTCTCCTCCTTCCGGTCCCCGGAAAATCTTGTGCAAAGCGTCGGAGGTCTCGGTGGCTGAGGAATCGTCGGCGTCTGGTAACTGGGTGCCCGTGGTTCCGTTGTCGGCGCTGCCGAAAGGGGAGCGGCGCGTGATTATTCAGGGTGGGGAGACGGTTTTGCTGCTTTGGTATAAGGAGAAGATTTTTGCTATTGAGAATCGGTCCCCTGCTGAAGGTGCTTACACTGAAGGTCTCCTTAATGCCAAACTCACTAAGGATGGCTGTATTGTCTGTCCAACGACAGATAGCACATTTGACCTCCAAACTGGAGACATCAAGGAATGGTATCCAAACAATCCTGTCCTCAGAGTCCTCACACCAGCCTTAAGGAAGCTTTTTGTATACCCTGTAAAAACTGATGAAAACAACATCTATATCAACATGAGAGGAAACGTGATATCAGATTCATCTGCTGAGATTGTCTTCAGTGGGAAAGCTCAACCCGGTGTAACTGCTACCGATGTCAATGTCGATGAGGTGAAAATGGTGGTTGATGAAGAACTTGAAGGGTTTGGCTTCACTGGAAAGAATGAAGTAATAAATGGAAAGGCAGCAGTGATTGGGTTCTTGTTGTTGTTGGATTTTGAGCTCTTAACTGGGAAGGGTCTTCTCAAGGGAACTGGATTCTTGGACTTCATTTATTCTGCTTCAGATGCTTTCAAATAGATGTAAGTTCATATTCTCTTCTGCCTTGGGAAATGATATCATATCTGTTCTTGTATACTATATACAATAGCAACAAAATAGATGCTTTTTTTGAACCAAAAAATTGTGCCCATCTTTTATTGAAGTTTACAGATGAACTCGACTCAGAAAACGTACTGTTTATTCAACTGATAATCAGATCAAAACATTCATTAACAACATTCTATAGGAAAACTTGTGATTTCATTCCAGCTTCTGGGCCTGTAGGCTTTGTGGTGAGTTAGGGGCAAGTAGTAGTCGTCTAGGCGACGCTCCCTCCAAAACCAGCCTCCCGCTCCCGCTCCCGCTCCCACTGGCTTCATATACGGGCATTCCCGTCCC

Coding sequence (CDS)

ATGGCCGTCAATTCCACTAACCTCACTTCCCATTTTGCCCTCCCTTTCCGCCGGACCCACCCGATCTCCTCCCCATGCACCGCCGCCCTTCCCATTCTCAAACCCGGCCTTCGTCGTTCCCTTTTCGCCTCTCCTCCTTCCGGTCCCCGGAAAATCTTGTGCAAAGCGTCGGAGGTCTCGGTGGCTGAGGAATCGTCGGCGTCTGGTAACTGGGTGCCCGTGGTTCCGTTGTCGGCGCTGCCGAAAGGGGAGCGGCGCGTGATTATTCAGGGTGGGGAGACGGTTTTGCTGCTTTGGTATAAGGAGAAGATTTTTGCTATTGAGAATCGGTCCCCTGCTGAAGGTGCTTACACTGAAGGTCTCCTTAATGCCAAACTCACTAAGGATGGCTGTATTGTCTGTCCAACGACAGATAGCACATTTGACCTCCAAACTGGAGACATCAAGGAATGGTATCCAAACAATCCTGTCCTCAGAGTCCTCACACCAGCCTTAAGGAAGCTTTTTGTATACCCTGTAAAAACTGATGAAAACAACATCTATATCAACATGAGAGGAAACGTGATATCAGATTCATCTGCTGAGATTGTCTTCAGTGGGAAAGCTCAACCCGGTGTAACTGCTACCGATGTCAATGTCGATGAGGTGAAAATGGTGGTTGATGAAGAACTTGAAGGGTTTGGCTTCACTGGAAAGAATGAAGTAATAAATGGAAAGGCAGCAGTGATTGGGTTCTTGTTGTTGTTGGATTTTGAGCTCTTAACTGGGAAGGGTCTTCTCAAGGGAACTGGATTCTTGGACTTCATTTATTCTGCTTCAGATGCTTTCAAATAG

Protein sequence

MAVNSTNLTSHFALPFRRTHPISSPCTAALPILKPGLRRSLFASPPSGPRKILCKASEVSVAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKEKIFAIENRSPAEGAYTEGLLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNIYINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK

Homology

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BLAST of CmaCh09G012500 vs. TrEMBL
Match: A0A0A0KXX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650460 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 2.6e-140
Identity = 251/277 (90.61%), Postives = 263/277 (94.95%), Query Frame = 1


Query: 1   MAVNSTNLTSHFALPFRRTHPISSPCTAALPILKPGLRRSLFASPPSGPRKILCKASEVS 60
           MA+NSTN TSHFA  FRR HPIS+PCTAALP+LKP L RSLFASP    RKI CKASE+S
Sbjct: 1   MALNSTNFTSHFASTFRRIHPISAPCTAALPLLKPALHRSLFASPLPLARKISCKASEIS 60

Query: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKEKIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALP+GERRVIIQGGET+LLLWYK++IFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKDRIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTG+IKEWYP NPVLRVLTPALRKLF+Y VKTDENNI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGEIKEWYPKNPVLRVLTPALRKLFIYAVKTDENNI 180

Query: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVINGKA 240
           YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEV+MVVDE+LEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVRMVVDEDLEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 278
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYS SDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 277

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BLAST of CmaCh09G012500 vs. TrEMBL
Match: K7K5E9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G231900 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 3.1e-109
Identity = 205/263 (77.95%), Postives = 231/263 (87.83%), Query Frame = 1


Query: 21  PISSPCTAALPIL-KPGLRRSLFASPPSGPR-----KILCKASEVSVAEESSASG-NWVP 80
           P+S  C++   IL  P   + LF    S  R     ++ CKA++VSVAEESSASG NWVP
Sbjct: 64  PLSISCSSKTHILCLPSPPKPLFLCRHSLLRYRSTPRLTCKAAQVSVAEESSASGDNWVP 123

Query: 81  VVPLSALPKGERRVIIQGGETVLLLWYKEKIFAIENRSPAEGAYTEGLLNAKLTKDGCIV 140
           VVPLSALPKGERRVIIQ GET+LLLWYK+++FAIENRSPAEGAYTEGLLNAKLT+DGCIV
Sbjct: 124 VVPLSALPKGERRVIIQDGETILLLWYKDQVFAIENRSPAEGAYTEGLLNAKLTQDGCIV 183

Query: 141 CPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNIYINMRGNVISDSS 200
           CP+TDSTFDL+TGDIKEWYP NPVLRVLTPALRKLF+YPVKTDE NIYI++RG V SD+S
Sbjct: 184 CPSTDSTFDLRTGDIKEWYPKNPVLRVLTPALRKLFIYPVKTDEQNIYISIRGGVRSDAS 243

Query: 201 AEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVINGKAAVIGFLLLLDFEL 260
           AEIVFSGKAQPG TATDVNVDEVKM+VDE+ EGFGFTGKNE+ING+AAVIGFLLLLDFEL
Sbjct: 244 AEIVFSGKAQPGFTATDVNVDEVKMIVDEDQEGFGFTGKNEIINGRAAVIGFLLLLDFEL 303

Query: 261 LTGKGLLKGTGFLDFIYSASDAF 277
           LTGKGLLKGTGFLDF+YS ++AF
Sbjct: 304 LTGKGLLKGTGFLDFLYSVTNAF 326

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BLAST of CmaCh09G012500 vs. TrEMBL
Match: D7TLI1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g06720 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 2.0e-108
Identity = 204/279 (73.12%), Postives = 234/279 (83.87%), Query Frame = 1


Query: 5   STNLTSHF---ALPFRRTHPISSPCTAALPILKPGLRRSLFASPPSGPRKILCKASEVSV 64
           +T LT H    + P RR  P+       LP   P   RS   +     R+I CKA+EVSV
Sbjct: 6   ATKLTPHLLSLSSPLRRRKPLLHH----LPPPLPRNDRSSALTLGLSSRRITCKATEVSV 65

Query: 65  AEESSASG---NWVPVVPLSALPKGERRVIIQGGETVLLLWYKEKIFAIENRSPAEGAYT 124
           AEESSA+G   NWVPVVPLSALPKGERRVIIQ GET+LLLWYK++++AIENRSPAEGAY+
Sbjct: 66  AEESSAAGDGGNWVPVVPLSALPKGERRVIIQDGETILLLWYKDQVYAIENRSPAEGAYS 125

Query: 125 EGLLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDEN 184
           EGLLNAKLT+DGCIVCPTTDSTFDLQTG+IK+WYP NPVLRVLTPALR LF+YPVKTD+ 
Sbjct: 126 EGLLNAKLTQDGCIVCPTTDSTFDLQTGEIKDWYPKNPVLRVLTPALRTLFIYPVKTDDK 185

Query: 185 NIYINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVING 244
           NIYI M G V SD+SAEIVFSGKAQPG+TATDVNV+EV+M+VDE+ EGFGFTGKNE+ING
Sbjct: 186 NIYIRMSGGVSSDASAEIVFSGKAQPGLTATDVNVEEVRMIVDEDQEGFGFTGKNELING 245

Query: 245 KAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 278
           KAAV+GFLLLLDFELLTGKG+LKGTGFLDF+Y+ S+AFK
Sbjct: 246 KAAVVGFLLLLDFELLTGKGILKGTGFLDFLYAVSNAFK 280

[Close]

BLAST of CmaCh09G012500 vs. TrEMBL
Match: A0A0L9TAV7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan442s010800 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.1e-106
Identity = 205/277 (74.01%), Postives = 231/277 (83.39%), Query Frame = 1


Query: 12  FALPFRRTHPISSPCTAALPILKPGLRRSLFA-----------SPPSGPRKILCKASEVS 71
           F L   +TH +  P     P+L    R SL             S PS    + CKA++VS
Sbjct: 6   FPLSCSKTHILRLPAPPKPPLLCH--RHSLLCRRYRYSYSYTYSYPSCAPSLTCKAAQVS 65

Query: 72  VAEESSASG-NWVPVVPLSALPKGERRVIIQGGETVLLLWYKEKIFAIENRSPAEGAYTE 131
           VAEESSASG NWVPVVPL+ALP+GERRVIIQ GET+LLLWYK+++FAIENRSPAEGAYTE
Sbjct: 66  VAEESSASGDNWVPVVPLAALPRGERRVIIQDGETILLLWYKDQVFAIENRSPAEGAYTE 125

Query: 132 GLLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENN 191
           GLLNAKLT+DGCIVCP+TDSTFDL+TGDIKEWYP NPVLRVLTPALRKLF YPVK+DE N
Sbjct: 126 GLLNAKLTQDGCIVCPSTDSTFDLRTGDIKEWYPKNPVLRVLTPALRKLFTYPVKSDEQN 185

Query: 192 IYINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVINGK 251
           IYI++RG   +D+SAEIVFSGKAQPGVTATDVNV+EVKMVVDE+ EGFGFTGKNE+ING+
Sbjct: 186 IYISLRGGK-TDASAEIVFSGKAQPGVTATDVNVEEVKMVVDEDQEGFGFTGKNEIINGR 245

Query: 252 AAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAF 277
           AAVIGFLLLLDFELLTGKGLLKGTGFLDF+YS S+AF
Sbjct: 246 AAVIGFLLLLDFELLTGKGLLKGTGFLDFLYSVSNAF 279

[Close]

BLAST of CmaCh09G012500 vs. TrEMBL
Match: V7CI12_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G035200g PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 4.2e-106
Identity = 204/275 (74.18%), Postives = 230/275 (83.64%), Query Frame = 1


Query: 12  FALPFRRTHPISSPCTAALPILKPGLRRSLFA---------SPPSGPRKILCKASEVSVA 71
           F L   +TH +  P     P+L    R +L           S PS    + CKA++VSVA
Sbjct: 6   FPLSCSKTHILRLPAPPKPPLLYR--RHALLCRRYRYRYSYSYPSCTPSLKCKAAQVSVA 65

Query: 72  EESSASG-NWVPVVPLSALPKGERRVIIQGGETVLLLWYKEKIFAIENRSPAEGAYTEGL 131
           EESSASG NWVPVVPL+ALP+GERRVIIQ  +T+LLLWYK++IFAIENRSPAEGAYTEGL
Sbjct: 66  EESSASGDNWVPVVPLAALPRGERRVIIQDADTILLLWYKDQIFAIENRSPAEGAYTEGL 125

Query: 132 LNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNIY 191
           LNAKLT+DGCIVCPTTDSTFDL+TGDIKEWYP NPVLRVLTP+LRKLF YPVKTDE NIY
Sbjct: 126 LNAKLTQDGCIVCPTTDSTFDLRTGDIKEWYPKNPVLRVLTPSLRKLFTYPVKTDEQNIY 185

Query: 192 INMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVINGKAA 251
           I++R    SD+SAEIVFSGKAQPGVTA+DVNV+EVKMV+DEE EGFGFTGKNE+ING+AA
Sbjct: 186 ISLRSGK-SDASAEIVFSGKAQPGVTASDVNVEEVKMVIDEEQEGFGFTGKNEIINGRAA 245

Query: 252 VIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAF 277
           VIGFLLLLDFELLTGKGLLKGTGFLDF+YSAS+AF
Sbjct: 246 VIGFLLLLDFELLTGKGLLKGTGFLDFLYSASNAF 277

[Close]

BLAST of CmaCh09G012500 vs. TAIR10
Match: AT1G71500.1 (AT1G71500.1 Rieske (2Fe-2S) domain-containing protein)

HSP 1 Score: 369.0 bits (946), Expect = 2.5e-102
Identity = 180/227 (79.30%), Postives = 206/227 (90.75%), Query Frame = 1


Query: 52  ILCKASEVSVAEESSASG-NWVPVVPLSALPKGERRVIIQGGETVLLLWYKEKIFAIENR 111
           + C+A+EVS +   S  G NWVPVVPLSALPKGERRV+IQ  ET+LLLWYK  +FAIENR
Sbjct: 61  VRCEATEVSSSSSVSTPGRNWVPVVPLSALPKGERRVVIQDDETILLLWYKNDVFAIENR 120

Query: 112 SPAEGAYTEGLLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFV 171
           SPAEGAY+EGLLNA+LT+DGCIVCP+TDSTFDL+TG+I+EWYP NPVLRVLTPALRKLFV
Sbjct: 121 SPAEGAYSEGLLNARLTQDGCIVCPSTDSTFDLRTGEIREWYPKNPVLRVLTPALRKLFV 180

Query: 172 YPVKTDENNIYINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFT 231
           YPVK DE NIYI++R +  ++++AEIVFSGKAQPG+TAT+VNVDEV+M+VDE  EGFGFT
Sbjct: 181 YPVKYDEENIYISIRDSGKTEAAAEIVFSGKAQPGLTATNVNVDEVRMIVDEGSEGFGFT 240

Query: 232 GKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 278
            KNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDF+YSASDAFK
Sbjct: 241 KKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFLYSASDAFK 287

[Close]

BLAST of CmaCh09G012500 vs. NCBI nr
Match: gi|659119378|ref|XP_008459624.1| (PREDICTED: uncharacterized protein LOC103498694 [Cucumis melo])

HSP 1 Score: 509.6 bits (1311), Expect = 3.4e-141
Identity = 252/277 (90.97%), Postives = 263/277 (94.95%), Query Frame = 1


Query: 1   MAVNSTNLTSHFALPFRRTHPISSPCTAALPILKPGLRRSLFASPPSGPRKILCKASEVS 60
           MA+NSTN TSHF   FRR HPIS+PCTAALP+LKP L RSL ASP    RKI CKASE+S
Sbjct: 1   MALNSTNFTSHFPSTFRRIHPISAPCTAALPLLKPALHRSLLASPLPPARKISCKASEIS 60

Query: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKEKIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALP+GERRVIIQGGET+LLLWYK++IFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKDRIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLF+YPVKTDENNI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFIYPVKTDENNI 180

Query: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVINGKA 240
           YINMRGNVISD+SAEIVFSGKAQPGVTATDVNVDEVKMVVDE+LEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDASAEIVFSGKAQPGVTATDVNVDEVKMVVDEDLEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 278
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYS SDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 277

[Close]

BLAST of CmaCh09G012500 vs. NCBI nr
Match: gi|449447593|ref|XP_004141552.1| (PREDICTED: uncharacterized protein LOC101206141 [Cucumis sativus])

HSP 1 Score: 506.1 bits (1302), Expect = 3.8e-140
Identity = 251/277 (90.61%), Postives = 263/277 (94.95%), Query Frame = 1


Query: 1   MAVNSTNLTSHFALPFRRTHPISSPCTAALPILKPGLRRSLFASPPSGPRKILCKASEVS 60
           MA+NSTN TSHFA  FRR HPIS+PCTAALP+LKP L RSLFASP    RKI CKASE+S
Sbjct: 1   MALNSTNFTSHFASTFRRIHPISAPCTAALPLLKPALHRSLFASPLPLARKISCKASEIS 60

Query: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKEKIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALP+GERRVIIQGGET+LLLWYK++IFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKDRIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTG+IKEWYP NPVLRVLTPALRKLF+Y VKTDENNI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGEIKEWYPKNPVLRVLTPALRKLFIYAVKTDENNI 180

Query: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVINGKA 240
           YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEV+MVVDE+LEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVRMVVDEDLEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 278
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYS SDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 277

[Close]

BLAST of CmaCh09G012500 vs. NCBI nr
Match: gi|947129900|gb|KRH77754.1| (hypothetical protein GLYMA_01G231900 [Glycine max])

HSP 1 Score: 402.9 bits (1034), Expect = 4.5e-109
Identity = 205/263 (77.95%), Postives = 231/263 (87.83%), Query Frame = 1


Query: 21  PISSPCTAALPIL-KPGLRRSLFASPPSGPR-----KILCKASEVSVAEESSASG-NWVP 80
           P+S  C++   IL  P   + LF    S  R     ++ CKA++VSVAEESSASG NWVP
Sbjct: 64  PLSISCSSKTHILCLPSPPKPLFLCRHSLLRYRSTPRLTCKAAQVSVAEESSASGDNWVP 123

Query: 81  VVPLSALPKGERRVIIQGGETVLLLWYKEKIFAIENRSPAEGAYTEGLLNAKLTKDGCIV 140
           VVPLSALPKGERRVIIQ GET+LLLWYK+++FAIENRSPAEGAYTEGLLNAKLT+DGCIV
Sbjct: 124 VVPLSALPKGERRVIIQDGETILLLWYKDQVFAIENRSPAEGAYTEGLLNAKLTQDGCIV 183

Query: 141 CPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNIYINMRGNVISDSS 200
           CP+TDSTFDL+TGDIKEWYP NPVLRVLTPALRKLF+YPVKTDE NIYI++RG V SD+S
Sbjct: 184 CPSTDSTFDLRTGDIKEWYPKNPVLRVLTPALRKLFIYPVKTDEQNIYISIRGGVRSDAS 243

Query: 201 AEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVINGKAAVIGFLLLLDFEL 260
           AEIVFSGKAQPG TATDVNVDEVKM+VDE+ EGFGFTGKNE+ING+AAVIGFLLLLDFEL
Sbjct: 244 AEIVFSGKAQPGFTATDVNVDEVKMIVDEDQEGFGFTGKNEIINGRAAVIGFLLLLDFEL 303

Query: 261 LTGKGLLKGTGFLDFIYSASDAF 277
           LTGKGLLKGTGFLDF+YS ++AF
Sbjct: 304 LTGKGLLKGTGFLDFLYSVTNAF 326

[Close]

BLAST of CmaCh09G012500 vs. NCBI nr
Match: gi|1021517406|ref|XP_016202207.1| (PREDICTED: uncharacterized protein LOC107643147 [Arachis ipaensis])

HSP 1 Score: 401.0 bits (1029), Expect = 1.7e-108
Identity = 196/231 (84.85%), Postives = 217/231 (93.94%), Query Frame = 1


Query: 47  SGPRKILCKASEVSVAEESSASG--NWVPVVPLSALPKGERRVIIQGGETVLLLWYKEKI 106
           S  R++ CKA++VSVAEESS+SG  NWVPVVPL ALPKGERRVIIQ GET+LLLWYK+++
Sbjct: 54  SSRRRVACKAAQVSVAEESSSSGGENWVPVVPLGALPKGERRVIIQDGETILLLWYKDEV 113

Query: 107 FAIENRSPAEGAYTEGLLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPA 166
           FAIENRSPAEGAY+EGLLNAKLT+DGCIVCPTTDSTFDL+TG+IKEWYP NPVLRVLTPA
Sbjct: 114 FAIENRSPAEGAYSEGLLNAKLTQDGCIVCPTTDSTFDLRTGEIKEWYPKNPVLRVLTPA 173

Query: 167 LRKLFVYPVKTDENNIYINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEEL 226
           LR LFVYPVKTDE NIYI+MRG V SD+SAEIVFSGKAQPG+TA+DVNVDEV+MVVDE+ 
Sbjct: 174 LRSLFVYPVKTDEQNIYISMRGGVTSDASAEIVFSGKAQPGLTASDVNVDEVRMVVDEDS 233

Query: 227 EGFGFTGKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDA 276
           EGFGFTGKNE+INGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYS S+A
Sbjct: 234 EGFGFTGKNELINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSNA 284

[Close]

BLAST of CmaCh09G012500 vs. NCBI nr
Match: gi|359495241|ref|XP_003634942.1| (PREDICTED: uncharacterized protein LOC100248314 [Vitis vinifera])

HSP 1 Score: 400.2 bits (1027), Expect = 2.9e-108
Identity = 204/279 (73.12%), Postives = 234/279 (83.87%), Query Frame = 1


Query: 5   STNLTSHF---ALPFRRTHPISSPCTAALPILKPGLRRSLFASPPSGPRKILCKASEVSV 64
           +T LT H    + P RR  P+       LP   P   RS   +     R+I CKA+EVSV
Sbjct: 6   ATKLTPHLLSLSSPLRRRKPLLHH----LPPPLPRNDRSSALTLGLSSRRITCKATEVSV 65

Query: 65  AEESSASG---NWVPVVPLSALPKGERRVIIQGGETVLLLWYKEKIFAIENRSPAEGAYT 124
           AEESSA+G   NWVPVVPLSALPKGERRVIIQ GET+LLLWYK++++AIENRSPAEGAY+
Sbjct: 66  AEESSAAGDGGNWVPVVPLSALPKGERRVIIQDGETILLLWYKDQVYAIENRSPAEGAYS 125

Query: 125 EGLLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDEN 184
           EGLLNAKLT+DGCIVCPTTDSTFDLQTG+IK+WYP NPVLRVLTPALR LF+YPVKTD+ 
Sbjct: 126 EGLLNAKLTQDGCIVCPTTDSTFDLQTGEIKDWYPKNPVLRVLTPALRTLFIYPVKTDDK 185

Query: 185 NIYINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVING 244
           NIYI M G V SD+SAEIVFSGKAQPG+TATDVNV+EV+M+VDE+ EGFGFTGKNE+ING
Sbjct: 186 NIYIRMSGGVSSDASAEIVFSGKAQPGLTATDVNVEEVRMIVDEDQEGFGFTGKNELING 245

Query: 245 KAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 278
           KAAV+GFLLLLDFELLTGKG+LKGTGFLDF+Y+ S+AFK
Sbjct: 246 KAAVVGFLLLLDFELLTGKGILKGTGFLDFLYAVSNAFK 280

The following BLAST results are available for this feature:

BLAST of CmaCh09G012500 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh09G012500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXX5_CUCSA	2.6e-140	90.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650460 PE=4 SV=1	[more]
K7K5E9_SOYBN	3.1e-109	77.95	Uncharacterized protein OS=Glycine max GN=GLYMA_01G231900 PE=4 SV=1	[more]
D7TLI1_VITVI	2.0e-108	73.12	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g06720 PE=4 SV=...	[more]
A0A0L9TAV7_PHAAN	1.1e-106	74.01	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan442s010800 PE=4 SV=1	[more]
V7CI12_PHAVU	4.2e-106	74.18	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G035200g PE=4 SV=1	[more]

BLAST of CmaCh09G012500 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71500.1	2.5e-102	79.30	Rieske (2Fe-2S) domain-containing protein	[more]

BLAST of CmaCh09G012500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119378\|ref\|XP_008459624.1\|	3.4e-141	90.97	PREDICTED: uncharacterized protein LOC103498694 [Cucumis melo]	[more]
gi\|449447593\|ref\|XP_004141552.1\|	3.8e-140	90.61	PREDICTED: uncharacterized protein LOC101206141 [Cucumis sativus]	[more]
gi\|947129900\|gb\|KRH77754.1\|	4.5e-109	77.95	hypothetical protein GLYMA_01G231900 [Glycine max]	[more]
gi\|1021517406\|ref\|XP_016202207.1\|	1.7e-108	84.85	PREDICTED: uncharacterized protein LOC107643147 [Arachis ipaensis]	[more]
gi\|359495241\|ref\|XP_003634942.1\|	2.9e-108	73.12	PREDICTED: uncharacterized protein LOC100248314 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012748	Nitri_red_NirD
IPR017941	Rieske_2Fe-2S
IPR023329	Chlorophyll_a/b-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0008942	nitrite reductase [NAD(P)H] activity
GO:0051537	2 iron, 2 sulfur cluster binding
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0042128	nitrate assimilation
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042128	nitrate assimilation
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0051213	dioxygenase activity
molecular_function	GO:0008942	nitrite reductase [NAD(P)H] activity
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G012500.1	CmaCh09G012500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012748	Nitrite reductase [NAD(P)H] small subunit, NirD	PFAM	PF13806	Rieske_2	coord: 70..183 score: 1.9
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	GENE3D	G3DSA:2.102.10.10		coord: 66..185 score: 3.9
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROFILE	PS51296	RIESKE	coord: 72..182 score: 13
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	unknown	SSF50022	ISP domain	coord: 70..184 score: 3.01
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 223..261 score: 5.8
None	No IPR available	PANTHER	PTHR21496	FERREDOXIN-RELATED	coord: 49..277 score: 2.2E
None	No IPR available	PANTHER	PTHR21496:SF0	RIESKE DOMAIN-CONTAINING PROTEIN	coord: 49..277 score: 2.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G012500	Cucsa.236980	Cucumber (Gy14) v1	cgycmaB0657
CmaCh09G012500	Cla012489	Watermelon (97103) v1	cmawmB015
CmaCh09G012500	Csa5G650460	Cucumber (Chinese Long) v2	cmacuB030
CmaCh09G012500	MELO3C022193	Melon (DHL92) v3.5.1	cmameB010
CmaCh09G012500	ClCG08G000730	Watermelon (Charleston Gray)	cmawcgB030
CmaCh09G012500	CSPI05G31110	Wild cucumber (PI 183967)	cmacpiB030
CmaCh09G012500	CmoCh09G012940	Cucurbita moschata (Rifu)	cmacmoB029
CmaCh09G012500	Lsi08G000570	Bottle gourd (USVL1VR-Ls)	cmalsiB033
CmaCh09G012500	Cp4.1LG06g09950	Cucurbita pepo (Zucchini)	cmacpeB062
CmaCh09G012500	MELO3C022193.2	Melon (DHL92) v3.6.1	cmamedB011
CmaCh09G012500	CsaV3_5G040160	Cucumber (Chinese Long) v3	cmacucB0037
CmaCh09G012500	Cla97C08G145050	Watermelon (97103) v2	cmawmbB036
CmaCh09G012500	Bhi06G000003	Wax gourd	cmawgoB0013
CmaCh09G012500	CsGy5G030410	Cucumber (Gy14) v2	cgybcmaB579

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G012500	Cucurbita maxima (Rimu)	cmacmaB046
CmaCh09G012500	Cucurbita moschata (Rifu)	cmacmoB043
CmaCh09G012500	Cucurbita pepo (Zucchini)	cmacpeB056