Cla012489 (gene) Watermelon (97103) v1

Overview
NameCla012489
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionRieske (2Fe-2S) domain protein (AHRD V1 *-*- C7QP67_CYAP0); contains Interpro domain(s) IPR017941 Rieske [2Fe-2S] iron-sulphur domain
LocationChr8 : 466890 .. 468859 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGTCAATTCCACTAATCTCACTTCCCATTTTGCCCCCACATTCCGCCGAACCCACCCCATCTCCGCACCATGCACCGCCGCCCTGCCCCTTCTGAAACCCGCCCCTCACCGCTCCCTTTTCGCTTCACCTCCGCCCGCTGCCCGGAAAATCTGCTGCAAAGCCTCCGAGATCTCGGTGGCCGAGGAGTCTTCGGCATCTGGTAACTGGGTTCCGGTGGTTCCGTTGTCAGCGCTGCCGAGAGGGGAGCGGCGCGTGATTATTCAGGGCGGTGAAACTATTTTGCTTCTTTGGTATAAGGATAAGATTTTTGCTATTGAGAATCGGTCCCCTGCTGAAGGTGCTTACACTGAAGGTCTCCTCAATGCCAAGCTCACCAAGGTTAATCTCATTTCCACTGTTTTCTTTTTTTCTTGCGACTGTCAACAAAAATTATAGAACTCTCTGATTTTCATTGAGAATGAAGAACTCCTTATTTGGGATCTGTGTCTTGTCTGGACTTGGATATGTTGGTTGCAGGCACTTGAATTGTTGATTATTCTTTCGCCACTCCATTGTCTTTCTTCCTATGGTTCCTAGATAATAATGACGATAAGCTCCCAATTGGAGATAACATATTTTCTTGATTTAGAGAAGTTTATGTTCGTTATTGGCTTCAAGGAAGTATCGCAATTCCCCTTCCAAGCAACTAAGTTTCAAAAAGTCATTGCTGCTTTAGTAGAGTTTGGAGAACGGATCACTCCCTTTTCTTTACAATGTTTTGACAATGTCCATTGGGTCAAGCTCGATTTCATCTAAAAGCCTCATATAATGGAAATGTTATCCTCATATATAGTGTGGATCAAGCTTGATTTCACCCAGTAGACCTCCTACAATAGAGATGTATACCATAGATCATCAACTTCTCAACTAGTTGATTCTAAAACTTACTCAAAATTTTGGTAATGCATGGCCAAAATTAACTTTTAAATGTTCTTTTTCCTTCATAAGTACTTTTAAGTCTATCATTTAGTGATTTGTATAAATACTTATTGTTTGAATTCTCGATAAGTAGTCTCAACGTCTCAAAATATTGTATATTATACAGAAAGCAATTTGGTTCACGTCCATGAAATCTAGTTAAAATACCACTTCTTTGATTATAAGCATTCGAACCAACTTATGTATATCTGGCAAATGCTTATGACATCCCTTCCTATGGCTTGCAACAATGGTTTTTCTAGTGATTTGAAGTCAGCAAACGATACACCATACGACTGGAAAAGTGTATGGTTTCTTACTCATTTAAATTCTGTTAAGACTCCAATGTTCTTAATGTTTATCACCATTCAGTTTACAAACAGTAATGAGTTCTAATGTATTATTGCAACTTAGAACACTTCATTGAATGATCATACCCTTTCCTTACTCAGGATGGCTGTATTGTCTGTCCAACGACAGATAGCACATTTGACCTCCAAACTGGAGACATCAAGGAATGGTATCCAAAGAACCCAGTCCTCAGAGCCCTCACACCAGCCTTAAGGAAGCTTTTCATTTACCCTGTTAAAACTGATGAGGACAACATCTATATCAACATGAGAGCAAATGTAATATCAGATGCATCTGCTGAGATTGTCTTCAGTGGGAAAGCTCAACCTGGCGTAACTGCAACTGATGTCAATGTCGACGAGGTAACTAGAGAATGTTGGATCCTGAGACAAATCAATCCTGTTCTCTCTTTTTTTTCCCCCTAGTTTTCTTCAGATCTTGAACTTCTGCCTTGTGTTATGTTCAAGGTGAAAATGGTGGTTGATGAAGGTCTTGAAGGGTTTGGCTTCACTGGAAAGAACGAAGTGATAAATGGAAAGGCAGCAGTGATTGGCTTTTTGCTGTTGTTGGATTTTGAGCTTCTAACTGGGAAGGGTCTTCTCAAGGGAACTGGTTTCTTAGACTTCATTTATTCTGTTTCAGATGCTTTCAAATAG

mRNA sequence

ATGGCCGTCAATTCCACTAATCTCACTTCCCATTTTGCCCCCACATTCCGCCGAACCCACCCCATCTCCGCACCATGCACCGCCGCCCTGCCCCTTCTGAAACCCGCCCCTCACCGCTCCCTTTTCGCTTCACCTCCGCCCGCTGCCCGGAAAATCTGCTGCAAAGCCTCCGAGATCTCGGTGGCCGAGGAGTCTTCGGCATCTGGTAACTGGGTTCCGGTGGTTCCGTTGTCAGCGCTGCCGAGAGGGGAGCGGCGCGTGATTATTCAGGGCGGTGAAACTATTTTGCTTCTTTGGTATAAGGATAAGATTTTTGCTATTGAGAATCGGTCCCCTGCTGAAGGTGCTTACACTGAAGGTCTCCTCAATGCCAAGCTCACCAAGGATGGCTGTATTGTCTGTCCAACGACAGATAGCACATTTGACCTCCAAACTGGAGACATCAAGGAATGGTATCCAAAGAACCCAGTCCTCAGAGCCCTCACACCAGCCTTAAGGAAGCTTTTCATTTACCCTGTTAAAACTGATGAGGACAACATCTATATCAACATGAGAGCAAATGTAATATCAGATGCATCTGCTGAGATTGTCTTCAGTGGGAAAGCTCAACCTGGCGTAACTGCAACTGATGTCAATGTCGACGAGGTGAAAATGGTGGTTGATGAAGGTCTTGAAGGGTTTGGCTTCACTGGAAAGAACGAAGTGATAAATGGAAAGGCAGCAGTGATTGGCTTTTTGCTGTTGTTGGATTTTGAGCTTCTAACTGGGAAGGGTCTTCTCAAGGGAACTGGTTTCTTAGACTTCATTTATTCTGTTTCAGATGCTTTCAAATAG

Coding sequence (CDS)

ATGGCCGTCAATTCCACTAATCTCACTTCCCATTTTGCCCCCACATTCCGCCGAACCCACCCCATCTCCGCACCATGCACCGCCGCCCTGCCCCTTCTGAAACCCGCCCCTCACCGCTCCCTTTTCGCTTCACCTCCGCCCGCTGCCCGGAAAATCTGCTGCAAAGCCTCCGAGATCTCGGTGGCCGAGGAGTCTTCGGCATCTGGTAACTGGGTTCCGGTGGTTCCGTTGTCAGCGCTGCCGAGAGGGGAGCGGCGCGTGATTATTCAGGGCGGTGAAACTATTTTGCTTCTTTGGTATAAGGATAAGATTTTTGCTATTGAGAATCGGTCCCCTGCTGAAGGTGCTTACACTGAAGGTCTCCTCAATGCCAAGCTCACCAAGGATGGCTGTATTGTCTGTCCAACGACAGATAGCACATTTGACCTCCAAACTGGAGACATCAAGGAATGGTATCCAAAGAACCCAGTCCTCAGAGCCCTCACACCAGCCTTAAGGAAGCTTTTCATTTACCCTGTTAAAACTGATGAGGACAACATCTATATCAACATGAGAGCAAATGTAATATCAGATGCATCTGCTGAGATTGTCTTCAGTGGGAAAGCTCAACCTGGCGTAACTGCAACTGATGTCAATGTCGACGAGGTGAAAATGGTGGTTGATGAAGGTCTTGAAGGGTTTGGCTTCACTGGAAAGAACGAAGTGATAAATGGAAAGGCAGCAGTGATTGGCTTTTTGCTGTTGTTGGATTTTGAGCTTCTAACTGGGAAGGGTCTTCTCAAGGGAACTGGTTTCTTAGACTTCATTTATTCTGTTTCAGATGCTTTCAAATAG

Protein sequence

MAVNSTNLTSHFAPTFRRTHPISAPCTAALPLLKPAPHRSLFASPPPAARKICCKASEISVAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKDKIFAIENRSPAEGAYTEGLLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPKNPVLRALTPALRKLFIYPVKTDEDNIYINMRANVISDASAEIVFSGKAQPGVTATDVNVDEVKMVVDEGLEGFGFTGKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK
Homology
[Close]
BLAST of Cla012489 vs. TrEMBL
Match: A0A0A0KXX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650460 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 5.1e-144
Identity = 260/277 (93.86%), Postives = 266/277 (96.03%), Query Frame = 1 

Query: 1   MAVNSTNLTSHFAPTFRRTHPISAPCTAALPLLKPAPHRSLFASPPPAARKICCKASEIS 60
           MA+NSTN TSHFA TFRR HPISAPCTAALPLLKPA HRSLFASP P ARKI CKASEIS
Sbjct: 1   MALNSTNFTSHFASTFRRIHPISAPCTAALPLLKPALHRSLFASPLPLARKISCKASEIS 60

Query: 61  VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKDKIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKD+IFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKDRIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPKNPVLRALTPALRKLFIYPVKTDEDNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTG+IKEWYPKNPVLR LTPALRKLFIY VKTDE+NI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGEIKEWYPKNPVLRVLTPALRKLFIYAVKTDENNI 180

Query: 181 YINMRANVISDASAEIVFSGKAQPGVTATDVNVDEVKMVVDEGLEGFGFTGKNEVINGKA 240
           YINMR NVISD+SAEIVFSGKAQPGVTATDVNVDEV+MVVDE LEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVRMVVDEDLEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 278
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 277

[Close]
BLAST of Cla012489 vs. TrEMBL
Match: K7K5E9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G231900 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 1.7e-110
Identity = 206/263 (78.33%), Postives = 231/263 (87.83%), Query Frame = 1 

Query: 21  PISAPCTAALPLL-KPAPHRSLFASPPPAAR-----KICCKASEISVAEESSASG-NWVP 80
           P+S  C++   +L  P+P + LF       R     ++ CKA+++SVAEESSASG NWVP
Sbjct: 64  PLSISCSSKTHILCLPSPPKPLFLCRHSLLRYRSTPRLTCKAAQVSVAEESSASGDNWVP 123

Query: 81  VVPLSALPRGERRVIIQGGETILLLWYKDKIFAIENRSPAEGAYTEGLLNAKLTKDGCIV 140
           VVPLSALP+GERRVIIQ GETILLLWYKD++FAIENRSPAEGAYTEGLLNAKLT+DGCIV
Sbjct: 124 VVPLSALPKGERRVIIQDGETILLLWYKDQVFAIENRSPAEGAYTEGLLNAKLTQDGCIV 183

Query: 141 CPTTDSTFDLQTGDIKEWYPKNPVLRALTPALRKLFIYPVKTDEDNIYINMRANVISDAS 200
           CP+TDSTFDL+TGDIKEWYPKNPVLR LTPALRKLFIYPVKTDE NIYI++R  V SDAS
Sbjct: 184 CPSTDSTFDLRTGDIKEWYPKNPVLRVLTPALRKLFIYPVKTDEQNIYISIRGGVRSDAS 243

Query: 201 AEIVFSGKAQPGVTATDVNVDEVKMVVDEGLEGFGFTGKNEVINGKAAVIGFLLLLDFEL 260
           AEIVFSGKAQPG TATDVNVDEVKM+VDE  EGFGFTGKNE+ING+AAVIGFLLLLDFEL
Sbjct: 244 AEIVFSGKAQPGFTATDVNVDEVKMIVDEDQEGFGFTGKNEIINGRAAVIGFLLLLDFEL 303

Query: 261 LTGKGLLKGTGFLDFIYSVSDAF 277
           LTGKGLLKGTGFLDF+YSV++AF
Sbjct: 304 LTGKGLLKGTGFLDFLYSVTNAF 326

[Close]
BLAST of Cla012489 vs. TrEMBL
Match: D7TLI1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g06720 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.7e-108
Identity = 206/280 (73.57%), Postives = 234/280 (83.57%), Query Frame = 1 

Query: 5   STNLTSHF----APTFRRTHPISAPCTAALPLLKPAPHRSLFASPPPAARKICCKASEIS 64
           +T LT H     +P  RR      P    LP   P   RS   +   ++R+I CKA+E+S
Sbjct: 6   ATKLTPHLLSLSSPLRRRK-----PLLHHLPPPLPRNDRSSALTLGLSSRRITCKATEVS 65

Query: 65  VAEESSASG---NWVPVVPLSALPRGERRVIIQGGETILLLWYKDKIFAIENRSPAEGAY 124
           VAEESSA+G   NWVPVVPLSALP+GERRVIIQ GETILLLWYKD+++AIENRSPAEGAY
Sbjct: 66  VAEESSAAGDGGNWVPVVPLSALPKGERRVIIQDGETILLLWYKDQVYAIENRSPAEGAY 125

Query: 125 TEGLLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPKNPVLRALTPALRKLFIYPVKTDE 184
           +EGLLNAKLT+DGCIVCPTTDSTFDLQTG+IK+WYPKNPVLR LTPALR LFIYPVKTD+
Sbjct: 126 SEGLLNAKLTQDGCIVCPTTDSTFDLQTGEIKDWYPKNPVLRVLTPALRTLFIYPVKTDD 185

Query: 185 DNIYINMRANVISDASAEIVFSGKAQPGVTATDVNVDEVKMVVDEGLEGFGFTGKNEVIN 244
            NIYI M   V SDASAEIVFSGKAQPG+TATDVNV+EV+M+VDE  EGFGFTGKNE+IN
Sbjct: 186 KNIYIRMSGGVSSDASAEIVFSGKAQPGLTATDVNVEEVRMIVDEDQEGFGFTGKNELIN 245

Query: 245 GKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 278
           GKAAV+GFLLLLDFELLTGKG+LKGTGFLDF+Y+VS+AFK
Sbjct: 246 GKAAVVGFLLLLDFELLTGKGILKGTGFLDFLYAVSNAFK 280

[Close]
BLAST of Cla012489 vs. TrEMBL
Match: A0A0L9TAV7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan442s010800 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.9e-107
Identity = 198/234 (84.62%), Postives = 217/234 (92.74%), Query Frame = 1 

Query: 44  SPPPAARKICCKASEISVAEESSASG-NWVPVVPLSALPRGERRVIIQGGETILLLWYKD 103
           S P  A  + CKA+++SVAEESSASG NWVPVVPL+ALPRGERRVIIQ GETILLLWYKD
Sbjct: 47  SYPSCAPSLTCKAAQVSVAEESSASGDNWVPVVPLAALPRGERRVIIQDGETILLLWYKD 106

Query: 104 KIFAIENRSPAEGAYTEGLLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPKNPVLRALT 163
           ++FAIENRSPAEGAYTEGLLNAKLT+DGCIVCP+TDSTFDL+TGDIKEWYPKNPVLR LT
Sbjct: 107 QVFAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGDIKEWYPKNPVLRVLT 166

Query: 164 PALRKLFIYPVKTDEDNIYINMRANVISDASAEIVFSGKAQPGVTATDVNVDEVKMVVDE 223
           PALRKLF YPVK+DE NIYI++R    +DASAEIVFSGKAQPGVTATDVNV+EVKMVVDE
Sbjct: 167 PALRKLFTYPVKSDEQNIYISLRGGK-TDASAEIVFSGKAQPGVTATDVNVEEVKMVVDE 226

Query: 224 GLEGFGFTGKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAF 277
             EGFGFTGKNE+ING+AAVIGFLLLLDFELLTGKGLLKGTGFLDF+YSVS+AF
Sbjct: 227 DQEGFGFTGKNEIINGRAAVIGFLLLLDFELLTGKGLLKGTGFLDFLYSVSNAF 279

[Close]
BLAST of Cla012489 vs. TrEMBL
Match: A0A151SCU8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_025397 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.5e-106
Identity = 207/266 (77.82%), Postives = 226/266 (84.96%), Query Frame = 1 

Query: 21  PISAPCTAALPLLKP---------APHRSLFASPPPAARKICCKASEISVAEESSASGN- 80
           P+S P T  L    P         AP+  L    PP    + C+A+++SVAE SSA G+ 
Sbjct: 7   PLSCPKTHILRFSLPSKPFFLCHSAPNSLLSHRYPP----LRCRAAQVSVAEGSSAPGDS 66

Query: 81  WVPVVPLSALPRGERRVIIQGGETILLLWYKDKIFAIENRSPAEGAYTEGLLNAKLTKDG 140
           WVPVVPLSALPRGERRVIIQ GETILLLWYKD++FAIENRSPAEGAY+EGLLNAKLT+DG
Sbjct: 67  WVPVVPLSALPRGERRVIIQEGETILLLWYKDQVFAIENRSPAEGAYSEGLLNAKLTQDG 126

Query: 141 CIVCPTTDSTFDLQTGDIKEWYPKNPVLRALTPALRKLFIYPVKTDEDNIYINMRANVIS 200
           CIVCPTTDSTFDL+TG+IKEWYPKNPVLR LTPALRKLF YPVKTDE NIYI+MR  V S
Sbjct: 127 CIVCPTTDSTFDLRTGEIKEWYPKNPVLRVLTPALRKLFTYPVKTDEQNIYISMR-GVKS 186

Query: 201 DASAEIVFSGKAQPGVTATDVNVDEVKMVVDEGLEGFGFTGKNEVINGKAAVIGFLLLLD 260
           DASAEIVFSGKAQPG TATDVNVDEVKMVVDE LEGFGFTGKNE+INGKAAVIGFLLLLD
Sbjct: 187 DASAEIVFSGKAQPGFTATDVNVDEVKMVVDEELEGFGFTGKNEIINGKAAVIGFLLLLD 246

Query: 261 FELLTGKGLLKGTGFLDFIYSVSDAF 277
           FELLTGKGLLKGTGFLDF+YSV++AF
Sbjct: 247 FELLTGKGLLKGTGFLDFLYSVTNAF 267

[Close]
BLAST of Cla012489 vs. NCBI nr
Match: gi|659119378|ref|XP_008459624.1| (PREDICTED: uncharacterized protein LOC103498694 [Cucumis melo])

HSP 1 Score: 519.2 bits (1336), Expect = 4.3e-144
Identity = 261/277 (94.22%), Postives = 264/277 (95.31%), Query Frame = 1 

Query: 1   MAVNSTNLTSHFAPTFRRTHPISAPCTAALPLLKPAPHRSLFASPPPAARKICCKASEIS 60
           MA+NSTN TSHF  TFRR HPISAPCTAALPLLKPA HRSL ASP P ARKI CKASEIS
Sbjct: 1   MALNSTNFTSHFPSTFRRIHPISAPCTAALPLLKPALHRSLLASPLPPARKISCKASEIS 60

Query: 61  VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKDKIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKD+IFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKDRIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPKNPVLRALTPALRKLFIYPVKTDEDNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYP NPVLR LTPALRKLFIYPVKTDE+NI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFIYPVKTDENNI 180

Query: 181 YINMRANVISDASAEIVFSGKAQPGVTATDVNVDEVKMVVDEGLEGFGFTGKNEVINGKA 240
           YINMR NVISDASAEIVFSGKAQPGVTATDVNVDEVKMVVDE LEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDASAEIVFSGKAQPGVTATDVNVDEVKMVVDEDLEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 278
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 277

[Close]
BLAST of Cla012489 vs. NCBI nr
Match: gi|449447593|ref|XP_004141552.1| (PREDICTED: uncharacterized protein LOC101206141 [Cucumis sativus])

HSP 1 Score: 518.5 bits (1334), Expect = 7.4e-144
Identity = 260/277 (93.86%), Postives = 266/277 (96.03%), Query Frame = 1 

Query: 1   MAVNSTNLTSHFAPTFRRTHPISAPCTAALPLLKPAPHRSLFASPPPAARKICCKASEIS 60
           MA+NSTN TSHFA TFRR HPISAPCTAALPLLKPA HRSLFASP P ARKI CKASEIS
Sbjct: 1   MALNSTNFTSHFASTFRRIHPISAPCTAALPLLKPALHRSLFASPLPLARKISCKASEIS 60

Query: 61  VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKDKIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKD+IFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKDRIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPKNPVLRALTPALRKLFIYPVKTDEDNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTG+IKEWYPKNPVLR LTPALRKLFIY VKTDE+NI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGEIKEWYPKNPVLRVLTPALRKLFIYAVKTDENNI 180

Query: 181 YINMRANVISDASAEIVFSGKAQPGVTATDVNVDEVKMVVDEGLEGFGFTGKNEVINGKA 240
           YINMR NVISD+SAEIVFSGKAQPGVTATDVNVDEV+MVVDE LEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVRMVVDEDLEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 278
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 277

[Close]
BLAST of Cla012489 vs. NCBI nr
Match: gi|947129900|gb|KRH77754.1| (hypothetical protein GLYMA_01G231900 [Glycine max])

HSP 1 Score: 407.1 bits (1045), Expect = 2.4e-110
Identity = 206/263 (78.33%), Postives = 231/263 (87.83%), Query Frame = 1 

Query: 21  PISAPCTAALPLL-KPAPHRSLFASPPPAAR-----KICCKASEISVAEESSASG-NWVP 80
           P+S  C++   +L  P+P + LF       R     ++ CKA+++SVAEESSASG NWVP
Sbjct: 64  PLSISCSSKTHILCLPSPPKPLFLCRHSLLRYRSTPRLTCKAAQVSVAEESSASGDNWVP 123

Query: 81  VVPLSALPRGERRVIIQGGETILLLWYKDKIFAIENRSPAEGAYTEGLLNAKLTKDGCIV 140
           VVPLSALP+GERRVIIQ GETILLLWYKD++FAIENRSPAEGAYTEGLLNAKLT+DGCIV
Sbjct: 124 VVPLSALPKGERRVIIQDGETILLLWYKDQVFAIENRSPAEGAYTEGLLNAKLTQDGCIV 183

Query: 141 CPTTDSTFDLQTGDIKEWYPKNPVLRALTPALRKLFIYPVKTDEDNIYINMRANVISDAS 200
           CP+TDSTFDL+TGDIKEWYPKNPVLR LTPALRKLFIYPVKTDE NIYI++R  V SDAS
Sbjct: 184 CPSTDSTFDLRTGDIKEWYPKNPVLRVLTPALRKLFIYPVKTDEQNIYISIRGGVRSDAS 243

Query: 201 AEIVFSGKAQPGVTATDVNVDEVKMVVDEGLEGFGFTGKNEVINGKAAVIGFLLLLDFEL 260
           AEIVFSGKAQPG TATDVNVDEVKM+VDE  EGFGFTGKNE+ING+AAVIGFLLLLDFEL
Sbjct: 244 AEIVFSGKAQPGFTATDVNVDEVKMIVDEDQEGFGFTGKNEIINGRAAVIGFLLLLDFEL 303

Query: 261 LTGKGLLKGTGFLDFIYSVSDAF 277
           LTGKGLLKGTGFLDF+YSV++AF
Sbjct: 304 LTGKGLLKGTGFLDFLYSVTNAF 326

[Close]
BLAST of Cla012489 vs. NCBI nr
Match: gi|359495241|ref|XP_003634942.1| (PREDICTED: uncharacterized protein LOC100248314 [Vitis vinifera])

HSP 1 Score: 399.8 bits (1026), Expect = 3.8e-108
Identity = 206/280 (73.57%), Postives = 234/280 (83.57%), Query Frame = 1 

Query: 5   STNLTSHF----APTFRRTHPISAPCTAALPLLKPAPHRSLFASPPPAARKICCKASEIS 64
           +T LT H     +P  RR      P    LP   P   RS   +   ++R+I CKA+E+S
Sbjct: 6   ATKLTPHLLSLSSPLRRRK-----PLLHHLPPPLPRNDRSSALTLGLSSRRITCKATEVS 65

Query: 65  VAEESSASG---NWVPVVPLSALPRGERRVIIQGGETILLLWYKDKIFAIENRSPAEGAY 124
           VAEESSA+G   NWVPVVPLSALP+GERRVIIQ GETILLLWYKD+++AIENRSPAEGAY
Sbjct: 66  VAEESSAAGDGGNWVPVVPLSALPKGERRVIIQDGETILLLWYKDQVYAIENRSPAEGAY 125

Query: 125 TEGLLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPKNPVLRALTPALRKLFIYPVKTDE 184
           +EGLLNAKLT+DGCIVCPTTDSTFDLQTG+IK+WYPKNPVLR LTPALR LFIYPVKTD+
Sbjct: 126 SEGLLNAKLTQDGCIVCPTTDSTFDLQTGEIKDWYPKNPVLRVLTPALRTLFIYPVKTDD 185

Query: 185 DNIYINMRANVISDASAEIVFSGKAQPGVTATDVNVDEVKMVVDEGLEGFGFTGKNEVIN 244
            NIYI M   V SDASAEIVFSGKAQPG+TATDVNV+EV+M+VDE  EGFGFTGKNE+IN
Sbjct: 186 KNIYIRMSGGVSSDASAEIVFSGKAQPGLTATDVNVEEVRMIVDEDQEGFGFTGKNELIN 245

Query: 245 GKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 278
           GKAAV+GFLLLLDFELLTGKG+LKGTGFLDF+Y+VS+AFK
Sbjct: 246 GKAAVVGFLLLLDFELLTGKGILKGTGFLDFLYAVSNAFK 280

[Close]
BLAST of Cla012489 vs. NCBI nr
Match: gi|1021517406|ref|XP_016202207.1| (PREDICTED: uncharacterized protein LOC107643147 [Arachis ipaensis])

HSP 1 Score: 398.3 bits (1022), Expect = 1.1e-107
Identity = 195/228 (85.53%), Postives = 215/228 (94.30%), Query Frame = 1 

Query: 50  RKICCKASEISVAEESSASG--NWVPVVPLSALPRGERRVIIQGGETILLLWYKDKIFAI 109
           R++ CKA+++SVAEESS+SG  NWVPVVPL ALP+GERRVIIQ GETILLLWYKD++FAI
Sbjct: 57  RRVACKAAQVSVAEESSSSGGENWVPVVPLGALPKGERRVIIQDGETILLLWYKDEVFAI 116

Query: 110 ENRSPAEGAYTEGLLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPKNPVLRALTPALRK 169
           ENRSPAEGAY+EGLLNAKLT+DGCIVCPTTDSTFDL+TG+IKEWYPKNPVLR LTPALR 
Sbjct: 117 ENRSPAEGAYSEGLLNAKLTQDGCIVCPTTDSTFDLRTGEIKEWYPKNPVLRVLTPALRS 176

Query: 170 LFIYPVKTDEDNIYINMRANVISDASAEIVFSGKAQPGVTATDVNVDEVKMVVDEGLEGF 229
           LF+YPVKTDE NIYI+MR  V SDASAEIVFSGKAQPG+TA+DVNVDEV+MVVDE  EGF
Sbjct: 177 LFVYPVKTDEQNIYISMRGGVTSDASAEIVFSGKAQPGLTASDVNVDEVRMVVDEDSEGF 236

Query: 230 GFTGKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDA 276
           GFTGKNE+INGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVS+A
Sbjct: 237 GFTGKNELINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSNA 284

The following BLAST results are available for this feature:
BLAST of Cla012489 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXX5_CUCSA5.1e-14493.86Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650460 PE=4 SV=1[more]
K7K5E9_SOYBN1.7e-11078.33Uncharacterized protein OS=Glycine max GN=GLYMA_01G231900 PE=4 SV=1[more]
D7TLI1_VITVI2.7e-10873.57Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g06720 PE=4 SV=... [more]
A0A0L9TAV7_PHAAN2.9e-10784.62Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan442s010800 PE=4 SV=1[more]
A0A151SCU8_CAJCA2.5e-10677.82Uncharacterized protein OS=Cajanus cajan GN=KK1_025397 PE=4 SV=1[more]
BLAST of Cla012489 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659119378|ref|XP_008459624.1|4.3e-14494.22PREDICTED: uncharacterized protein LOC103498694 [Cucumis melo][more]
gi|449447593|ref|XP_004141552.1|7.4e-14493.86PREDICTED: uncharacterized protein LOC101206141 [Cucumis sativus][more]
gi|947129900|gb|KRH77754.1|2.4e-11078.33hypothetical protein GLYMA_01G231900 [Glycine max][more]
gi|359495241|ref|XP_003634942.1|3.8e-10873.57PREDICTED: uncharacterized protein LOC100248314 [Vitis vinifera][more]
gi|1021517406|ref|XP_016202207.1|1.1e-10785.53PREDICTED: uncharacterized protein LOC107643147 [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012748Nitri_red_NirD
IPR017941Rieske_2Fe-2S
IPR023329Chlorophyll_a/b-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008942nitrite reductase [NAD(P)H] activity
GO:00515372 iron, 2 sulfur cluster binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0042128nitrate assimilation
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042128 nitrate assimilation
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0051213 dioxygenase activity
molecular_function GO:0008942 nitrite reductase [NAD(P)H] activity
molecular_function GO:0016491 oxidoreductase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU59592watermelon EST collection version 2.0transcribed_cluster
WMU75718watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012489Cla012489.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU59592WMU59592transcribed_cluster
WMU75718WMU75718transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012748Nitrite reductase [NAD(P)H] small subunit, NirDPFAMPF13806Rieske_2coord: 70..183
score: 6.1
IPR017941Rieske [2Fe-2S] iron-sulphur domainGENE3DG3DSA:2.102.10.10coord: 66..186
score: 5.6
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROFILEPS51296RIESKEcoord: 72..182
score: 1
IPR017941Rieske [2Fe-2S] iron-sulphur domainunknownSSF50022ISP domaincoord: 70..183
score: 1.83
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 223..261
score: 5.3
NoneNo IPR availablePANTHERPTHR21496FERREDOXIN-RELATEDcoord: 50..277
score: 7.5E
NoneNo IPR availablePANTHERPTHR21496:SF0RIESKE DOMAIN-CONTAINING PROTEINcoord: 50..277
score: 7.5E