CmaCh09G010060 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G010060
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Na(+)-translocating NADH-quinone reductase subunit A
Location	Cma_Chr09 : 5133774 .. 5136761 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCTTTAAATTTGAAGTTTCTTCGGGAATCGCGTTGGGTCGTGGTGGGGTTGATCATTTTTTTCCCCTTCCTTTCTGGGCTTTAGCGCCCTGAGGCCACTGAAATCCATGCTCGTCGGTATTCAATGGACCCGTCGTCTGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGGTAATCTTTGTTCTTTGATTCTTGAATCTCTTTTCTCCTATCGGAAATGGAATTTGTTCTTCCATTGAGTTACCGTGGATTGAAAATTTTGGAATCTGCGATGGAATTTCGGGAATGTGTTTATGAACCCTAATGTTGAATGGTAGGTTTGTTTTTGTGTTTGTCTTCGGATCGATTAAACCTCCTTTTATTGGAAGATTGTGCTTGAATTTTATCTACGGATTTTGTCCCAATGTTGCTGATTGTTTGGTAATCTATGCTGAAGATTTCGTTGTTTTGTTTTCTGGATTTGGTGGTTTGTTCTTGGTAGTGGTGGAAATTTTGCTTCCCCTATTTCTGAGGCTTTGCTTTTATTGTTTCCACTTTCTTCTTTTACACGGCATGCTGAATACAAAAATTTGAGGTTTGGTTGAGTGAATCATAAGATGTTAAGATTGATCAAAAGAGTGCCCAAACTGAGAACAAAAGTAGTATAGTCTAACTCAGCTACAAACCTATACACATATTTCGAGAACACAAGTTAATAATTGAAGGATACTGATGTTGCTCCTTTGAGTTTCGGTCTTGCAACCGTAATCCCCAGGTGGAGGTACTCGAATTGGGAAAACTCAGACCGTGGAGATAAGAAAACCTGTCAGGAAGGATTTGATGAAAAACTCCGTTTAAACAACCTAAAGAATGCAGGAATAATCCGGTCTTATCGCAGTCCATATCCTCCATACTAATTCTTTAGCACGGGTTCAATGTTCAATTTGATTAAGTTAAAAGCCTAAATTTGACTCACTTAGCTGCTGGAGTTTCATGAGAGAAATCATTTCTGCTAAAAAAGTATTGTCATTCTCTGTCTGTGGTGGTTTCCTCATGAAAATGGAAAACGATGGATAGTTCTTGATGATATCTTTGCAAGGTACTTCGTGGAATGGTAGTGTTTTCCGTTCATTATGTGTAGCCGTTAGCTTGGAAATGGTTAATGTAATAGCATTAGATTCTACTTTCTAACTTGTTTCTTAGATGGGAAATAATTTTATAGATGATCAAAACTTACAAAAGAAGAAGGGAGGAGAGTCAAGTCTGAGCGTGTAGGAGACTTTGAAAAGTTCCTCTCATTGACCATAAGCATACAAAGAAAGAGCGGCCAAAGTTAGTGTAACAGCCTAAGTCTACCGCTAATAGATATTGTCCTCTTTGGGTTTTTCCTTCCCTTTCGGGGCTTCCCCTCAAGGTTTTTAAAACACTCCCTTCGGGGCTCAGCCTCCTCGCTGGCACATCGCCTGGTGTCTGGCTTTGATACCATTTATGACAGCTCAAGCTCACCGCTAGTAGGATATTTCCTTTTTGGGCTTTCCCTTTTGGGGCTTCCCCTCAAGGTTCTTAAAACGCGTCTGCTAGAGAGAGGTTTCCACACTCTTATAAAGAAGGTTTCGTTCTCCTCTCCAACCGATGTGGGATCTCACAAATAAGATCCGACTCTAGTGGCTTGATAGTAGAGGAGGTCCAAAATTATCTGTTACTCTTTTGCGTTTGTTGTTTCAGTTCCTTTGGGTGCCTGGATTATGATATTGTTCTTGAACTATGAATATATGCACTCAGTGAGCTGTTTATGATTAAATCTTCTGTACTGCCTAAACTTATAATCATAGAACCTTACTATCTCTCAAGCGACGGGAATCCATATTGATGATATCATTACATTTATTTGAACGGTCTATCTAAACTAGATATTTGCTTGTCAAATTACTTATGTCTAAGGTACAGAATCGTAGTAGTATTTAAACCATGAAAATTTCTTGATTGTCATAAATGGTTTGTGAACAATTCCTATCATTGTGGGGTACTACAGTAGTTGCTTGTGAGCAAGTTACTGTCATTTACTTCCTTGGCTCTTAGTCGTTTCCTCAAGAATATACAAACACATTACACACTCAAGTTTTTGTTGAAATGATAATCTTCATGAAGCATGGTACTGACTGGTGTGTGGTATCTTTTTGCAACAGACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAAGAAGAGACAGACCAAACTAAAGTTAGCTCTCCAAAAGTAGAGATCCAAGAGCCTCCTCCAAAGGTAGCTGTCAGTAACTCTTAATATAAATGTCAACAAAAACCACCTAGGAGATTGCCCAAAGATTTAGCAGATAAGCTGTAAATATCTATGAAAATGAAATATCGACACCGAATGAATATTATAGACTCAGATGATCATATTATAATTCTTCATGGCTAGGTTAAAGAAGAGATGACGATCTATCTTGGTCCACATGGCGCGCCACCATCACAGTCAAAACAAGATTTGAACCCCGCCAATCGTAAACATAGGTTAAAGCAGAAATTGAAGGAAGCAGATCGGAGGACCACGACCGGACGGGAGAATAAGTTGGAGAATTTGAGAGAGCTTGTAGGTGGTGGAAAATCAAGCACCAATATGACAAAAGGGTCTTCAAGGGACTGGCTTGACCCACATTGCCATGAGGCTCAGTTTGAGAAGTAATGCCCACAGAGATCAACTTAACAAAATTAGCATAGTTTTCAAGATAAAGATCTGATGGGTCATTTTGTCACGGTATTAACCGTCCTTTCGAGACAAATAATACCTTCTCTCTATATTTTTGGAAACTTAATGCCCAGAGTTTAGAACTATAATAAGTTTTGTATTGGAGCTTCGATGGTATAATTCAAGTAGTTGCTGTAAAAGCAGCATGTTTGGTGAAGCTAATCATTGAATGTTCTTAAACTTCCTAACAACAATGCCTCAATCTTACAAAATTGAATTACTCTAA

mRNA sequence

TTTCCTTTAAATTTGAAGTTTCTTCGGGAATCGCGTTGGGTCGTGGTGGGGTTGATCATTTTTTTCCCCTTCCTTTCTGGGCTTTAGCGCCCTGAGGCCACTGAAATCCATGCTCGTCGGTATTCAATGGACCCGTCGTCTGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAAGAAGAGACAGACCAAACTAAAGTTAGCTCTCCAAAAGTAGAGATCCAAGAGCCTCCTCCAAAGGTTAAAGAAGAGATGACGATCTATCTTGGTCCACATGGCGCGCCACCATCACAGTCAAAACAAGATTTGAACCCCGCCAATCGTAAACATAGGTTAAAGCAGAAATTGAAGGAAGCAGATCGGAGGACCACGACCGGACGGGAGAATAAGTTGGAGAATTTGAGAGAGCTTGTAGGTGGTGGAAAATCAAGCACCAATATGACAAAAGGGTCTTCAAGGGACTGGCTTGACCCACATTGCCATGAGGCTCAGTTTGAGAAGTAATGCCCACAGAGATCAACTTAACAAAATTAGCATAGTTTTCAAGATAAAGATCTGATGGGTCATTTTGTCACGGTATTAACCGTCCTTTCGAGACAAATAATACCTTCTCTCTATATTTTTGGAAACTTAATGCCCAGAGTTTAGAACTATAATAAGTTTTGTATTGGAGCTTCGATGGTATAATTCAAGTAGTTGCTGTAAAAGCAGCATGTTTGGTGAAGCTAATCATTGAATGTTCTTAAACTTCCTAACAACAATGCCTCAATCTTACAAAATTGAATTACTCTAA

Coding sequence (CDS)

ATGGACCCGTCGTCTGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAAGAAGAGACAGACCAAACTAAAGTTAGCTCTCCAAAAGTAGAGATCCAAGAGCCTCCTCCAAAGGTTAAAGAAGAGATGACGATCTATCTTGGTCCACATGGCGCGCCACCATCACAGTCAAAACAAGATTTGAACCCCGCCAATCGTAAACATAGGTTAAAGCAGAAATTGAAGGAAGCAGATCGGAGGACCACGACCGGACGGGAGAATAAGTTGGAGAATTTGAGAGAGCTTGTAGGTGGTGGAAAATCAAGCACCAATATGACAAAAGGGTCTTCAAGGGACTGGCTTGACCCACATTGCCATGAGGCTCAGTTTGAGAAGTAA

Protein sequence

MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK

Homology

[Close]

BLAST of CmaCh09G010060 vs. TrEMBL
Match: A0A0A0K8B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G099280 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.0e-63
Identity = 126/139 (90.65%), Postives = 129/139 (92.81%), Query Frame = 1


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIY 60
           MDPSSV KAPP EEDEWDTDGFVIPSLGIEE   DQT+V SPKVEI+EPPPKVKEE TIY
Sbjct: 1   MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEE--ADQTRVGSPKVEIEEPPPKVKEETTIY 60

Query: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120
           LGPHGAPPSQSKQDLNP NRK RLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM 
Sbjct: 61  LGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMA 120

Query: 121 KGSSRDWLDPHCHEAQFEK 140
           KGSSRDWLDPHCHEA+FEK
Sbjct: 121 KGSSRDWLDPHCHEAEFEK 137

[Close]

BLAST of CmaCh09G010060 vs. TrEMBL
Match: M5WVM2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012836mg PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-42
Identity = 97/144 (67.36%), Postives = 116/144 (80.56%), Query Frame = 1


Query: 1   MDPSSVHKAPPV-EEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPP-PKVKEEMT 60
           MDPS V    P+ EEDEWDTDGFVIPSL IE++  D++   +P +E  +PP PK K E  
Sbjct: 1   MDPSPVRTTQPLDEEDEWDTDGFVIPSLVIEDQ--DKSNHDAPTIEASKPPSPKAKGEEK 60

Query: 61  IYLGPHGAPPSQSKQ--DLNPANRKHRLKQKLKEADRRTT-TGRENKLENLRELVGGGKS 120
           IYLGPHGAPPSQSKQ  ++NP++RK + KQKLKEADRR+T TGRENK+ENLRELVGGGK 
Sbjct: 61  IYLGPHGAPPSQSKQQQEVNPSSRKQKFKQKLKEADRRSTGTGRENKVENLRELVGGGKG 120

Query: 121 STNMTKGSSRDWLDPHCHEAQFEK 140
           S++M K S+RDWLDPHCHE+QFEK
Sbjct: 121 SSSMAKDSNRDWLDPHCHESQFEK 142

[Close]

BLAST of CmaCh09G010060 vs. TrEMBL
Match: W9QQJ1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018227 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-40
Identity = 100/145 (68.97%), Postives = 113/145 (77.93%), Query Frame = 1


Query: 1   MDPSSVHKAPPV--EEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPP-PKVKEEM 60
           MDPS V   P +  EEDEWDTDGFVIPSLGI  EE DQT   +PKVE  +PP PK K E 
Sbjct: 1   MDPSPVRTTPSLEEEEDEWDTDGFVIPSLGI--EEPDQTNPDAPKVEPSKPPSPKAKIEE 60

Query: 61  TIYLGPHGAPPSQSK-QDLNPANRKHRLKQKLKEADRRTT-TGRENKLENLRELVGGGK- 120
           +IYLGPHGAPPSQSK Q++  ++RK R KQKLKEADRR +  GRENK+ENLRELVGGGK 
Sbjct: 61  SIYLGPHGAPPSQSKQQEVTSSSRKQRFKQKLKEADRRISGVGRENKVENLRELVGGGKV 120

Query: 121 SSTNMTKGSSRDWLDPHCHEAQFEK 140
            S +M KG+SRDWLD HCHEA+FEK
Sbjct: 121 GSGSMAKGTSRDWLDQHCHEAKFEK 143

[Close]

BLAST of CmaCh09G010060 vs. TrEMBL
Match: V4UTD1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009817mg PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-40
Identity = 97/144 (67.36%), Postives = 116/144 (80.56%), Query Frame = 1


Query: 1   MDPSSVHKAPPV-EEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPP-PKVKEEMT 60
           M+PS VH  P + EEDEWDTDGFVIPSLGI   ++DQ+K  + +VE  +PP PK K+E  
Sbjct: 1   MEPSPVHTTPQIEEEDEWDTDGFVIPSLGI--GDSDQSKRDAVEVESSKPPSPKGKKEEN 60

Query: 61  IYLGPHGAPPSQSK-QDLNPANRKHRLKQKLKEADRRTT-TGRENKLENLRELV-GGGKS 120
           IYLGPHGAPPS  K Q+LN ++RK R KQKLKEADRRT+  GRENK+ENLRELV GGG+ 
Sbjct: 61  IYLGPHGAPPSHPKHQELNSSSRKQRFKQKLKEADRRTSGPGRENKVENLRELVGGGGRV 120

Query: 121 STNMTKGSSRDWLDPHCHEAQFEK 140
           S NM+KGS+RDWLDPHCHE+QFE+
Sbjct: 121 SANMSKGSNRDWLDPHCHESQFER 142

[Close]

BLAST of CmaCh09G010060 vs. TrEMBL
Match: M5WI40_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012836mg PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.7e-40
Identity = 97/150 (64.67%), Postives = 117/150 (78.00%), Query Frame = 1


Query: 1   MDPSSVHKAPPV-EEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPP-PKV----- 60
           MDPS V    P+ EEDEWDTDGFVIPSL IE++  D++   +P +E  +PP PK+     
Sbjct: 1   MDPSPVRTTQPLDEEDEWDTDGFVIPSLVIEDQ--DKSNHDAPTIEASKPPSPKLSSFLQ 60

Query: 61  -KEEMTIYLGPHGAPPSQSKQ--DLNPANRKHRLKQKLKEADRRTT-TGRENKLENLREL 120
            K E  IYLGPHGAPPSQSKQ  ++NP++RK + KQKLKEADRR+T TGRENK+ENLREL
Sbjct: 61  AKGEEKIYLGPHGAPPSQSKQQQEVNPSSRKQKFKQKLKEADRRSTGTGRENKVENLREL 120

Query: 121 VGGGKSSTNMTKGSSRDWLDPHCHEAQFEK 140
           VGGGK S++M K S+RDWLDPHCHE+QFEK
Sbjct: 121 VGGGKGSSSMAKDSNRDWLDPHCHESQFEK 148

[Close]

BLAST of CmaCh09G010060 vs. TAIR10
Match: AT5G55640.1 (AT5G55640.1 unknown protein)

HSP 1 Score: 140.2 bits (352), Expect = 9.7e-34
Identity = 84/137 (61.31%), Postives = 100/137 (72.99%), Query Frame = 1


Query: 10  PPVEE-DEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPP-PKVKEEMTIYLGPHGAP 69
           P VE+ DEWDTDGFVIPSL IEE++ +    S  +VE  +P  PK K E  IYLGPHGAP
Sbjct: 11  PKVEDNDEWDTDGFVIPSLEIEEDKVNNNNDS--EVETSKPSSPKSKAEENIYLGPHGAP 70

Query: 70  PSQSKQD-LNPANRKHRLKQKLKEADRRTT-TGRENKLENLRELVGGG---KSSTNMTKG 129
           PSQ +    N ++RK R KQ LKEAD++ + +GRENK+ NLRELVGGG   +  TNM KG
Sbjct: 71  PSQLQDGGSNTSSRKQRFKQMLKEADQKMSGSGRENKMANLRELVGGGAGAEKGTNMGKG 130

Query: 130 SSRDWLDPHCHEAQFEK 140
            SRDWLDPHCHE+QFEK
Sbjct: 131 VSRDWLDPHCHESQFEK 145

[Close]

BLAST of CmaCh09G010060 vs. NCBI nr
Match: gi|778725337|ref|XP_004150791.2| (PREDICTED: uncharacterized protein LOC101216518 [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-63
Identity = 126/139 (90.65%), Postives = 129/139 (92.81%), Query Frame = 1


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIY 60
           MDPSSV KAPP EEDEWDTDGFVIPSLGIEE   DQT+V SPKVEI+EPPPKVKEE TIY
Sbjct: 1   MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEE--ADQTRVGSPKVEIEEPPPKVKEETTIY 60

Query: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120
           LGPHGAPPSQSKQDLNP NRK RLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM 
Sbjct: 61  LGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMA 120

Query: 121 KGSSRDWLDPHCHEAQFEK 140
           KGSSRDWLDPHCHEA+FEK
Sbjct: 121 KGSSRDWLDPHCHEAEFEK 137

[Close]

BLAST of CmaCh09G010060 vs. NCBI nr
Match: gi|659126065|ref|XP_008462996.1| (PREDICTED: uncharacterized protein LOC103501243 [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-62
Identity = 125/139 (89.93%), Postives = 128/139 (92.09%), Query Frame = 1


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIY 60
           MDPSSV KAPP EEDEWDTDGFVIPSLGIEE  TDQT+V SPKVEI+EPPPKVKEE TIY
Sbjct: 1   MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEE--TDQTRVGSPKVEIEEPPPKVKEETTIY 60

Query: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120
           LGPHGAPPSQSKQDLNP NRK RLK KLKEADRRTT GRENKLENLRELVG GKSSTNMT
Sbjct: 61  LGPHGAPPSQSKQDLNPTNRKQRLKLKLKEADRRTTMGRENKLENLRELVGAGKSSTNMT 120

Query: 121 KGSSRDWLDPHCHEAQFEK 140
           KGSSRDWLDPHCHEA+FEK
Sbjct: 121 KGSSRDWLDPHCHEAEFEK 137

[Close]

BLAST of CmaCh09G010060 vs. NCBI nr
Match: gi|694328805|ref|XP_009355193.1| (PREDICTED: uncharacterized protein LOC103946263 [Pyrus x bretschneideri])

HSP 1 Score: 182.6 bits (462), Expect = 4.8e-43
Identity = 98/142 (69.01%), Postives = 117/142 (82.39%), Query Frame = 1


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPP-PKVKEEMTI 60
           MDPS V   PP+EEDEWDTDGFVIPSL IEE+  D +  ++P VE  +PP PK K+E  I
Sbjct: 1   MDPSPVRTTPPLEEDEWDTDGFVIPSLVIEEQ--DSSNHNAPTVEASKPPSPKAKKEEKI 60

Query: 61  YLGPHGAPPSQSK-QDLNPANRKHRLKQKLKEADRRTT-TGRENKLENLRELVGGGKSST 120
           YLGPHGAPP QSK Q++NP++RK + KQKLKEAD+++T TGRENKLENLRELV GGK S+
Sbjct: 61  YLGPHGAPPLQSKQQEVNPSSRKQKFKQKLKEADKKSTRTGRENKLENLRELV-GGKGSS 120

Query: 121 NMTKGSSRDWLDPHCHEAQFEK 140
           +M KGS+RDWLDPHCHE+QFEK
Sbjct: 121 SMAKGSNRDWLDPHCHESQFEK 139

[Close]

BLAST of CmaCh09G010060 vs. NCBI nr
Match: gi|657987247|ref|XP_008385777.1| (PREDICTED: uncharacterized protein LOC103448309 [Malus domestica])

HSP 1 Score: 180.3 bits (456), Expect = 2.4e-42
Identity = 99/143 (69.23%), Postives = 118/143 (82.52%), Query Frame = 1


Query: 1   MDPSSVHKAPPV-EEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPP-PKVKEEMT 60
           MDPS V   PP+ EEDEWDTDGFVIPSL IEE+  D +  ++P VE  +PP PK K+E  
Sbjct: 1   MDPSPVRTTPPLEEEDEWDTDGFVIPSLVIEEQ--DSSNHNAPTVEASKPPSPKAKKEEK 60

Query: 61  IYLGPHGAPPSQSK-QDLNPANRKHRLKQKLKEADRRTT-TGRENKLENLRELVGGGKSS 120
           IYLGPHGAPPSQSK Q++NP++RK + KQKLKEAD+++T TGRENKLENLRELV GGK S
Sbjct: 61  IYLGPHGAPPSQSKQQEVNPSSRKQKFKQKLKEADKKSTRTGRENKLENLRELV-GGKGS 120

Query: 121 TNMTKGSSRDWLDPHCHEAQFEK 140
           ++M KGS+RDWLDPHCHE+QFEK
Sbjct: 121 SSMAKGSNRDWLDPHCHESQFEK 140

[Close]

BLAST of CmaCh09G010060 vs. NCBI nr
Match: gi|1000957780|ref|XP_002522756.2| (PREDICTED: uncharacterized protein LOC8286841 [Ricinus communis])

HSP 1 Score: 179.9 bits (455), Expect = 3.1e-42
Identity = 97/144 (67.36%), Postives = 112/144 (77.78%), Query Frame = 1


Query: 1   MDPSSVHKAPPV--EEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPP-PKVKEEM 60
           MDPS  H   P+  +EDEWDTDGFVIPSLGI  E+ + T   + +VE  +PP PK+K+E 
Sbjct: 1   MDPSQHHATSPLNDQEDEWDTDGFVIPSLGI--EDPNHTAADASEVEASKPPSPKIKKEE 60

Query: 61  TIYLGPHGAPPSQSK-QDLNPANRKHRLKQKLKEADRRTT-TGRENKLENLRELVGGGKS 120
            IYLGPHG PPSQSK QDLNP+ RK R KQKLKEADRR + TGRENKLENLRELVG G+ 
Sbjct: 61  NIYLGPHGVPPSQSKQQDLNPSGRKQRFKQKLKEADRRISGTGRENKLENLRELVGSGRG 120

Query: 121 STNMTKGSSRDWLDPHCHEAQFEK 140
           + NM KGS RDWLDPHCHE++FEK
Sbjct: 121 NPNMAKGSLRDWLDPHCHESEFEK 142

The following BLAST results are available for this feature:

BLAST of CmaCh09G010060 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh09G010060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8B7_CUCSA	1.0e-63	90.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G099280 PE=4 SV=1	[more]
M5WVM2_PRUPE	3.7e-42	67.36	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012836mg PE=4 SV=1	[more]
W9QQJ1_9ROSA	1.6e-40	68.97	Uncharacterized protein OS=Morus notabilis GN=L484_018227 PE=4 SV=1	[more]
V4UTD1_9ROSI	1.6e-40	67.36	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009817mg PE=4 SV=1	[more]
M5WI40_PRUPE	2.7e-40	64.67	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012836mg PE=4 SV=1	[more]

BLAST of CmaCh09G010060 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G55640.1	9.7e-34	61.31	unknown protein	[more]

BLAST of CmaCh09G010060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778725337\|ref\|XP_004150791.2\|	1.4e-63	90.65	PREDICTED: uncharacterized protein LOC101216518 [Cucumis sativus]	[more]
gi\|659126065\|ref\|XP_008462996.1\|	1.6e-62	89.93	PREDICTED: uncharacterized protein LOC103501243 [Cucumis melo]	[more]
gi\|694328805\|ref\|XP_009355193.1\|	4.8e-43	69.01	PREDICTED: uncharacterized protein LOC103946263 [Pyrus x bretschneideri]	[more]
gi\|657987247\|ref\|XP_008385777.1\|	2.4e-42	69.23	PREDICTED: uncharacterized protein LOC103448309 [Malus domestica]	[more]
gi\|1000957780\|ref\|XP_002522756.2\|	3.1e-42	67.36	PREDICTED: uncharacterized protein LOC8286841 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G010060.1	CmaCh09G010060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36075	FAMILY NOT NAMED	coord: 2..139 score: 4.8
None	No IPR available	PANTHER	PTHR36075:SF1	SUBFAMILY NOT NAMED	coord: 2..139 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G010060	Cla003305	Watermelon (97103) v1	cmawmB009
CmaCh09G010060	Csa7G099280	Cucumber (Chinese Long) v2	cmacuB041
CmaCh09G010060	MELO3C024930	Melon (DHL92) v3.5.1	cmameB014
CmaCh09G010060	ClCG09G021250	Watermelon (Charleston Gray)	cmawcgB007
CmaCh09G010060	CmoCh01G011240	Cucurbita moschata (Rifu)	cmacmoB048
CmaCh09G010060	CmoCh09G010090	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G010060	Lsi02G018380	Bottle gourd (USVL1VR-Ls)	cmalsiB018
CmaCh09G010060	Cp4.1LG06g08310	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G010060	Cp4.1LG02g00400	Cucurbita pepo (Zucchini)	cmacpeB046
CmaCh09G010060	MELO3C024930.2	Melon (DHL92) v3.6.1	cmamedB019
CmaCh09G010060	CsaV3_7G015090	Cucumber (Chinese Long) v3	cmacucB0052
CmaCh09G010060	Cla97C09G182660	Watermelon (97103) v2	cmawmbB048
CmaCh09G010060	Bhi09G001471	Wax gourd	cmawgoB0027
CmaCh09G010060	CsGy7G008030	Cucumber (Gy14) v2	cgybcmaB886
CmaCh09G010060	Carg12873	Silver-seed gourd	carcmaB1240
CmaCh09G010060	Carg22410	Silver-seed gourd	carcmaB1223

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh09G010060	CmaCh01G010780	Cucurbita maxima (Rimu)	cmacmaB052

The following block(s) are covering this gene:

None