CmaCh09G010060.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCCTTTAAATTTGAAGTTTCTTCGGGAATCGCGTTGGGTCGTGGTGGGGTTGATCATTTTTTTCCCCTTCCTTTCTGGGCTTTAGCGCCCTGAGGCCACTGAAATCCATGCTCGTCGGTATTCAATGGACCCGTCGTCTGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGGTAATCTTTGTTCTTTGATTCTTGAATCTCTTTTCTCCTATCGGAAATGGAATTTGTTCTTCCATTGAGTTACCGTGGATTGAAAATTTTGGAATCTGCGATGGAATTTCGGGAATGTGTTTATGAACCCTAATGTTGAATGGTAGGTTTGTTTTTGTGTTTGTCTTCGGATCGATTAAACCTCCTTTTATTGGAAGATTGTGCTTGAATTTTATCTACGGATTTTGTCCCAATGTTGCTGATTGTTTGGTAATCTATGCTGAAGATTTCGTTGTTTTGTTTTCTGGATTTGGTGGTTTGTTCTTGGTAGTGGTGGAAATTTTGCTTCCCCTATTTCTGAGGCTTTGCTTTTATTGTTTCCACTTTCTTCTTTTACACGGCATGCTGAATACAAAAATTTGAGGTTTGGTTGAGTGAATCATAAGATGTTAAGATTGATCAAAAGAGTGCCCAAACTGAGAACAAAAGTAGTATAGTCTAACTCAGCTACAAACCTATACACATATTTCGAGAACACAAGTTAATAATTGAAGGATACTGATGTTGCTCCTTTGAGTTTCGGTCTTGCAACCGTAATCCCCAGGTGGAGGTACTCGAATTGGGAAAACTCAGACCGTGGAGATAAGAAAACCTGTCAGGAAGGATTTGATGAAAAACTCCGTTTAAACAACCTAAAGAATGCAGGAATAATCCGGTCTTATCGCAGTCCATATCCTCCATACTAATTCTTTAGCACGGGTTCAATGTTCAATTTGATTAAGTTAAAAGCCTAAATTTGACTCACTTAGCTGCTGGAGTTTCATGAGAGAAATCATTTCTGCTAAAAAAGTATTGTCATTCTCTGTCTGTGGTGGTTTCCTCATGAAAATGGAAAACGATGGATAGTTCTTGATGATATCTTTGCAAGGTACTTCGTGGAATGGTAGTGTTTTCCGTTCATTATGTGTAGCCGTTAGCTTGGAAATGGTTAATGTAATAGCATTAGATTCTACTTTCTAACTTGTTTCTTAGATGGGAAATAATTTTATAGATGATCAAAACTTACAAAAGAAGAAGGGAGGAGAGTCAAGTCTGAGCGTGTAGGAGACTTTGAAAAGTTCCTCTCATTGACCATAAGCATACAAAGAAAGAGCGGCCAAAGTTAGTGTAACAGCCTAAGTCTACCGCTAATAGATATTGTCCTCTTTGGGTTTTTCCTTCCCTTTCGGGGCTTCCCCTCAAGGTTTTTAAAACACTCCCTTCGGGGCTCAGCCTCCTCGCTGGCACATCGCCTGGTGTCTGGCTTTGATACCATTTATGACAGCTCAAGCTCACCGCTAGTAGGATATTTCCTTTTTGGGCTTTCCCTTTTGGGGCTTCCCCTCAAGGTTCTTAAAACGCGTCTGCTAGAGAGAGGTTTCCACACTCTTATAAAGAAGGTTTCGTTCTCCTCTCCAACCGATGTGGGATCTCACAAATAAGATCCGACTCTAGTGGCTTGATAGTAGAGGAGGTCCAAAATTATCTGTTACTCTTTTGCGTTTGTTGTTTCAGTTCCTTTGGGTGCCTGGATTATGATATTGTTCTTGAACTATGAATATATGCACTCAGTGAGCTGTTTATGATTAAATCTTCTGTACTGCCTAAACTTATAATCATAGAACCTTACTATCTCTCAAGCGACGGGAATCCATATTGATGATATCATTACATTTATTTGAACGGTCTATCTAAACTAGATATTTGCTTGTCAAATTACTTATGTCTAAGGTACAGAATCGTAGTAGTATTTAAACCATGAAAATTTCTTGATTGTCATAAATGGTTTGTGAACAATTCCTATCATTGTGGGGTACTACAGTAGTTGCTTGTGAGCAAGTTACTGTCATTTACTTCCTTGGCTCTTAGTCGTTTCCTCAAGAATATACAAACACATTACACACTCAAGTTTTTGTTGAAATGATAATCTTCATGAAGCATGGTACTGACTGGTGTGTGGTATCTTTTTGCAACAGACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAAGAAGAGACAGACCAAACTAAAGTTAGCTCTCCAAAAGTAGAGATCCAAGAGCCTCCTCCAAAGGTAGCTGTCAGTAACTCTTAATATAAATGTCAACAAAAACCACCTAGGAGATTGCCCAAAGATTTAGCAGATAAGCTGTAAATATCTATGAAAATGAAATATCGACACCGAATGAATATTATAGACTCAGATGATCATATTATAATTCTTCATGGCTAGGTTAAAGAAGAGATGACGATCTATCTTGGTCCACATGGCGCGCCACCATCACAGTCAAAACAAGATTTGAACCCCGCCAATCGTAAACATAGGTTAAAGCAGAAATTGAAGGAAGCAGATCGGAGGACCACGACCGGACGGGAGAATAAGTTGGAGAATTTGAGAGAGCTTGTAGGTGGTGGAAAATCAAGCACCAATATGACAAAAGGGTCTTCAAGGGACTGGCTTGACCCACATTGCCATGAGGCTCAGTTTGAGAAGTAATGCCCACAGAGATCAACTTAACAAAATTAGCATAGTTTTCAAGATAAAGATCTGATGGGTCATTTTGTCACGGTATTAACCGTCCTTTCGAGACAAATAATACCTTCTCTCTATATTTTTGGAAACTTAATGCCCAGAGTTTAGAACTATAATAAGTTTTGTATTGGAGCTTCGATGGTATAATTCAAGTAGTTGCTGTAAAAGCAGCATGTTTGGTGAAGCTAATCATTGAATGTTCTTAAACTTCCTAACAACAATGCCTCAATCTTACAAAATTGAATTACTCTAA TTTCCTTTAAATTTGAAGTTTCTTCGGGAATCGCGTTGGGTCGTGGTGGGGTTGATCATTTTTTTCCCCTTCCTTTCTGGGCTTTAGCGCCCTGAGGCCACTGAAATCCATGCTCGTCGGTATTCAATGGACCCGTCGTCTGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAAGAAGAGACAGACCAAACTAAAGTTAGCTCTCCAAAAGTAGAGATCCAAGAGCCTCCTCCAAAGGTTAAAGAAGAGATGACGATCTATCTTGGTCCACATGGCGCGCCACCATCACAGTCAAAACAAGATTTGAACCCCGCCAATCGTAAACATAGGTTAAAGCAGAAATTGAAGGAAGCAGATCGGAGGACCACGACCGGACGGGAGAATAAGTTGGAGAATTTGAGAGAGCTTGTAGGTGGTGGAAAATCAAGCACCAATATGACAAAAGGGTCTTCAAGGGACTGGCTTGACCCACATTGCCATGAGGCTCAGTTTGAGAAGTAATGCCCACAGAGATCAACTTAACAAAATTAGCATAGTTTTCAAGATAAAGATCTGATGGGTCATTTTGTCACGGTATTAACCGTCCTTTCGAGACAAATAATACCTTCTCTCTATATTTTTGGAAACTTAATGCCCAGAGTTTAGAACTATAATAAGTTTTGTATTGGAGCTTCGATGGTATAATTCAAGTAGTTGCTGTAAAAGCAGCATGTTTGGTGAAGCTAATCATTGAATGTTCTTAAACTTCCTAACAACAATGCCTCAATCTTACAAAATTGAATTACTCTAA ATGGACCCGTCGTCTGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAAGAAGAGACAGACCAAACTAAAGTTAGCTCTCCAAAAGTAGAGATCCAAGAGCCTCCTCCAAAGGTTAAAGAAGAGATGACGATCTATCTTGGTCCACATGGCGCGCCACCATCACAGTCAAAACAAGATTTGAACCCCGCCAATCGTAAACATAGGTTAAAGCAGAAATTGAAGGAAGCAGATCGGAGGACCACGACCGGACGGGAGAATAAGTTGGAGAATTTGAGAGAGCTTGTAGGTGGTGGAAAATCAAGCACCAATATGACAAAAGGGTCTTCAAGGGACTGGCTTGACCCACATTGCCATGAGGCTCAGTTTGAGAAGTAA MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
BLAST of CmaCh09G010060.1 vs. TrEMBL
Match: A0A0A0K8B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G099280 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.0e-63 Identity = 126/139 (90.65%), Postives = 129/139 (92.81%), Query Frame = 1
BLAST of CmaCh09G010060.1 vs. TrEMBL
Match: M5WVM2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012836mg PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 3.7e-42 Identity = 97/144 (67.36%), Postives = 116/144 (80.56%), Query Frame = 1
BLAST of CmaCh09G010060.1 vs. TrEMBL
Match: W9QQJ1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018227 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.6e-40 Identity = 100/145 (68.97%), Postives = 113/145 (77.93%), Query Frame = 1
BLAST of CmaCh09G010060.1 vs. TrEMBL
Match: V4UTD1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009817mg PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.6e-40 Identity = 97/144 (67.36%), Postives = 116/144 (80.56%), Query Frame = 1
BLAST of CmaCh09G010060.1 vs. TrEMBL
Match: M5WI40_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012836mg PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 2.7e-40 Identity = 97/150 (64.67%), Postives = 117/150 (78.00%), Query Frame = 1
BLAST of CmaCh09G010060.1 vs. TAIR10
Match: AT5G55640.1 (AT5G55640.1 unknown protein) HSP 1 Score: 140.2 bits (352), Expect = 9.7e-34 Identity = 84/137 (61.31%), Postives = 100/137 (72.99%), Query Frame = 1
BLAST of CmaCh09G010060.1 vs. NCBI nr
Match: gi|778725337|ref|XP_004150791.2| (PREDICTED: uncharacterized protein LOC101216518 [Cucumis sativus]) HSP 1 Score: 250.8 bits (639), Expect = 1.4e-63 Identity = 126/139 (90.65%), Postives = 129/139 (92.81%), Query Frame = 1
BLAST of CmaCh09G010060.1 vs. NCBI nr
Match: gi|659126065|ref|XP_008462996.1| (PREDICTED: uncharacterized protein LOC103501243 [Cucumis melo]) HSP 1 Score: 247.3 bits (630), Expect = 1.6e-62 Identity = 125/139 (89.93%), Postives = 128/139 (92.09%), Query Frame = 1
BLAST of CmaCh09G010060.1 vs. NCBI nr
Match: gi|694328805|ref|XP_009355193.1| (PREDICTED: uncharacterized protein LOC103946263 [Pyrus x bretschneideri]) HSP 1 Score: 182.6 bits (462), Expect = 4.8e-43 Identity = 98/142 (69.01%), Postives = 117/142 (82.39%), Query Frame = 1
BLAST of CmaCh09G010060.1 vs. NCBI nr
Match: gi|657987247|ref|XP_008385777.1| (PREDICTED: uncharacterized protein LOC103448309 [Malus domestica]) HSP 1 Score: 180.3 bits (456), Expect = 2.4e-42 Identity = 99/143 (69.23%), Postives = 118/143 (82.52%), Query Frame = 1
BLAST of CmaCh09G010060.1 vs. NCBI nr
Match: gi|1000957780|ref|XP_002522756.2| (PREDICTED: uncharacterized protein LOC8286841 [Ricinus communis]) HSP 1 Score: 179.9 bits (455), Expect = 3.1e-42 Identity = 97/144 (67.36%), Postives = 112/144 (77.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
|