CmaCh09G005820 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G005820
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTarget SNARE coiled-coil domain protein
LocationCma_Chr09 : 2678812 .. 2682116 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTGTGCTCTCACCTTCCGAACCGAAGACTCTGAAACTGATCCTCGCAATTCGTCTGTTTCCGATCAGATTATTCGATTTCGGATTATCTTTTCATTCTGTATCTAATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCAACGCTGCTCCTTATCGCTCCAGGTATTGTCATCGTTCTTATCATGCTAACTTCCAGTACATTAACAGAAATAGAGGTATTGCAAGAACTGCGAGTTTTCTGTCACTTGTCTTGGGGAATTTCTCAAATTGTTTCTATGTTTACCGGTGTTAAGAATGATGATTACTCAATTCATGTCGCTTAATTGCGATCGTCCTTTGTTTTGAGGTATTCAGGGAGGGGCTTAGCACAAGAACGGCGGCTGCTTCCGATGAAATTCAACTTCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTAGGTCTTCACAGTCAAGTTAAAAGGCTTAGAAATGTGAGTATTATGGTTTTACGTTAATCTATGGTACAGCTTTGCACTTAGGTTTATTGAATTGCAAACTAGAACACGCAGCTAAGCCTTTATTGAAAGCACTCGGTGCTGGTAACTTCATCGAATAACTAGATATAAAGTACTCGAGATAAATCTGAACAGAAATCTTCAGATTTCTTGCGGTGCTCCTATAATATTTGAATTTAGCTATGTTCGAGGTTGATCTACTTGTAATGGTACTCTTGGAATTTGCATTGCTCGTGGTTCCTTTCTTAATGGAATTTACGAGCTGTACGTTCTGTATCAATACATCCCACATGGTATAGGTGCATGCTATGTGCTTAGTGATCGATTTCATTATCATGGCGGTCACAGACATTGTTTTCTTTCTGTGAAATTTTGTGAGTTTCCCTCCCTTCTTAGAAGAACGGAATATATGATACATTACATTCGACTGGTACAAGTTGAATCCATATTTACGAGTCTTTGTAGTTGCTGTTCTTGTCTATTGGCTCATCACCATTCAAAACGTATCATAGGCAATGAAAGGAATGCGTAATAGTAATGTAACAAGCATATAAATATAAATTATAATTGTCTGAAGAATTCTACTGAAACACAAACTGCATAGCATTCATTATTAAATGATCAACAAAATTCAGACGAACTAATTGCTTACCTTGTTTTCCTTCTTAAAAATGAGTTTGGAAAATAAAACCCCTGCAAATTCAAGACACAAAAACACGAGGCAAACCACAGTTTGAACCGTGCACAATTCTCTATCAACTACCATTAAAAGACTTCTAAAATCTCTTATCGAATTCATCCATGGTCATTCTGTTTTCTGGCAGTGGCTGTAATGCAGCGCTCACCTTCCCCCCACCTCCAACAACTTTTGATTATTATTGTCCATCTTCTTTTTGCTAAGTTGGAGTTGTTCCTTGGACGTCTTTCTCCGCTGTTTTTGGCTCGTATCATTTTTCTCTACAATTTGCCTCCGAATGCAATTTTCTTTTTTCCTGTTCTTTTTCTTCTTCTTCTTCTTCAGCATCTTAGTTGTACATTAGCAGCCTGATGGTTTGTTCCTTGAGTGGAGATTTGGTTTCTACAACAGTTGGTCTAGGAAATTGGTTTGCCAACACACCAGTTGTATGCCATCAAAATCTCGAAAATGAGGGGCATCTTTGCTTGACTGGCCAATTTTCTTCTTACAATAACATTGTTATTATTTGTAGAAAGATTTGTTTCTAAACGTTGAGCTAAGCGTTCTAGTGGGTTTGGTTTGAGATGGTACATGCCTAATTGTATGGCGGTCAATGTTGAGAAGCCCCTTCTGTCTCATATTATCGACGAAAGCTCATCTTGTTTCTTATTGAGTAAAAAAGAACAGATTTTGTAATGTTTTCTGGTCCAAAAGTCTCATAGTTTTATCATAATCTTAATCTTGTTGAGATCCTGTACAGATTATATATGCCAATTCGTTTAATTAATTCCATATTCGGCTTTTGATCTTTACAGATTGCTCATGACATTGGGACAGAAGCAAAGTTCCAGCATGATTTTCTAGATCAATTGGTATGCAATTTTTTTCTTAATGCTATTCATAGTTGTCATATTTCCATTTGTTTTTTGTATGTTGATTCAATTCTTGGTTTTTACTTACTGACGTTCTTACTTGTGAGAAAACTCTTTAGGTCCTGATTACTTGAGAAAATGGAAAATGATGGATAGAATGAGAATTAAAATTTTAAATATTGCATTTATTAAAATTACATTGGTACAAGGATCGGAGTGTTAATTATTCCAATTAATTGATTCCTCTTGGGATGATGGCAGGGAATGGAGTAAAATTATACAGGTTGCCTCATTTTTTATCCTCTAAGCCCACCGCTAGTAGTTAATGTCCTCTCTGGGCTTTCCCTTTCGGGTTTCCCTTCAAGGTTTTTAAAACGTGTCTGCTAGGGAGAGGTTTTCATACCGTTATAAAGAAGTTTCGTTGTCCTCCTCATCTGGTGTGGGATCTCACAATCCACCCTCCTTCAGGGCTCAGCGTCCTTGCTGGCACACTACCTCGTGTCCACTCCCCTTTAAGGCTTAGCCTCCTCACTGGCACATTGCCCGATGTCTGGCTCTGATACCATTTGTAACGTCTCAAACGCACCACTAGTCTCATATTTGATACAATTTGCTAACGATGGGCTTGAACCGTTACACTACCTCTTGCCAAAAGATAGAGTGGACCAAAATAGAGAACAAAAAGAACGAACAAATCAACGGTTCCCTTGATAACTTCAGTATAAAATGCATAGAGCTCTATCAGATTAAAAGAAACTAACTAAAGAAAACCAGTCTCATATCAACTTGTATCGGTTCCAAACGTGTGCAATGGCCAATATTTTTTTAGTTCTAACATATCCGATCATCTGTTTTCGGTCTTGTTGCAGCAAATGACATTGATCAAAGCTCAAGCAGGGGTGAAGGACAATGTAAGAAGATTGAACAAAAAAATCATACAGAACGGATCAAATCACGTCGTCCAGGTTGTCATATTTGCATTGATCTGTTTCTTTATAGTGTACATGTGGATGAAAATATCCAGAAAATGAATGTTCTTCCTCATTTTCTTCCTCATTATGAATGAAAAACCAGTTTGCTGGCCGGCAAAAAAGGGAAAAGAAACAGGAATGATGTTGAATATATTATCGCTGCCTCCCCCTCAGCTTAGAATATGGGACAGTGAAAATAGGCTTTTGATTTTCTCTTATAGGAACATTTTTGGTATACTTTTATACGCTATAAAGATTTGTATTGTGCCTCA

mRNA sequence

TCTGTGCTCTCACCTTCCGAACCGAAGACTCTGAAACTGATCCTCGCAATTCGTCTGTTTCCGATCAGATTATTCGATTTCGGATTATCTTTTCATTCTGTATCTAATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCAACGCTGCTCCTTATCGCTCCAGGGAGGGGCTTAGCACAAGAACGGCGGCTGCTTCCGATGAAATTCAACTTCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTAGGTCTTCACAGTCAAGTTAAAAGGCTTAGAAATATTGCTCATGACATTGGGACAGAAGCAAAGTTCCAGCATGATTTTCTAGATCAATTGCAAATGACATTGATCAAAGCTCAAGCAGGGGTGAAGGACAATGTAAGAAGATTGAACAAAAAAATCATACAGAACGGATCAAATCACGTCGTCCAGGTTGTCATATTTGCATTGATCTGTTTCTTTATAGTGTACATGTGGATGAAAATATCCAGAAAATGAATGTTCTTCCTCATTTTCTTCCTCATTATGAATGAAAAACCAGTTTGCTGGCCGGCAAAAAAGGGAAAAGAAACAGGAATGATGTTGAATATATTATCGCTGCCTCCCCCTCAGCTTAGAATATGGGACAGTGAAAATAGGCTTTTGATTTTCTCTTATAGGAACATTTTTGGTATACTTTTATACGCTATAAAGATTTGTATTGTGCCTCA

Coding sequence (CDS)

ATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCAACGCTGCTCCTTATCGCTCCAGGGAGGGGCTTAGCACAAGAACGGCGGCTGCTTCCGATGAAATTCAACTTCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTAGGTCTTCACAGTCAAGTTAAAAGGCTTAGAAATATTGCTCATGACATTGGGACAGAAGCAAAGTTCCAGCATGATTTTCTAGATCAATTGCAAATGACATTGATCAAAGCTCAAGCAGGGGTGAAGGACAATGTAAGAAGATTGAACAAAAAAATCATACAGAACGGATCAAATCACGTCGTCCAGGTTGTCATATTTGCATTGATCTGTTTCTTTATAGTGTACATGTGGATGAAAATATCCAGAAAATGA

Protein sequence

MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIFALICFFIVYMWMKISRK
Homology
[Close]
BLAST of CmaCh09G005820 vs. Swiss-Prot
Match: BETL1_ARATH (Bet1-like protein At4g14600 OS=Arabidopsis thaliana GN=At4g14600 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.3e-44
Identity = 89/138 (64.49%), Postives = 116/138 (84.06%), Query Frame = 1 

Query: 1   MASSSFRGGS--SFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQ 60
           MAS+  R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH Q
Sbjct: 1   MASNPHRSGAGGSLYGG-AAPYRSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQ 60

Query: 61  VKRLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVI 120
           V++L+NIA +IG+EAKFQ DFLD+LQMTLI+AQAGVK+N+R+LN  II++G+NH++ VV+
Sbjct: 61  VRQLKNIAQEIGSEAKFQRDFLDELQMTLIRAQAGVKNNIRKLNMSIIRSGNNHIMHVVL 120

Query: 121 FALICFFIVYMWMKISRK 137
           FAL+ FF++Y+W K+ ++
Sbjct: 121 FALLVFFVLYIWSKMFKR 137

[Close]
BLAST of CmaCh09G005820 vs. Swiss-Prot
Match: BETL2_ARATH (Bet1-like protein At1g29060 OS=Arabidopsis thaliana GN=At1g29060 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 8.0e-43
Identity = 87/136 (63.97%), Postives = 114/136 (83.82%), Query Frame = 1 

Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV+
Sbjct: 1   MASNRGAGGSLY--GGADPYRSREGLSTRNASGSEEIQLRIDPMHSDLDDEILGLHGQVR 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIFA 120
           +L+NIA +IG+EAK Q DFLD+LQMTLI+AQAGVK+N+R+LN  II++G+NH++ VV+FA
Sbjct: 61  QLKNIAQEIGSEAKSQRDFLDELQMTLIRAQAGVKNNIRKLNLSIIRSGNNHIMHVVLFA 120

Query: 121 LICFFIVYMWMKISRK 137
           L+ FFI+YMW K+ ++
Sbjct: 121 LLLFFILYMWSKMFKR 134

[Close]
BLAST of CmaCh09G005820 vs. TrEMBL
Match: A0A0A0LHL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889980 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.7e-60
Identity = 124/136 (91.18%), Postives = 130/136 (95.59%), Query Frame = 1 

Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNG+AA +RSREGLSTR AA+SDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIFA 120
           RLRNIA DIGTEAK Q DFLDQLQMTLIKAQAGVK+NVRRLNKKIIQNGSNHVVQVV+FA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWMKISRK 137
           LICFFIVYMW K+SRK
Sbjct: 121 LICFFIVYMWSKMSRK 136

[Close]
BLAST of CmaCh09G005820 vs. TrEMBL
Match: A0A0D2SM53_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G036600 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 7.5e-48
Identity = 101/137 (73.72%), Postives = 120/137 (87.59%), Query Frame = 1 

Query: 1   MASSSFR-GGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQV 60
           MAS+S R GG SFY G AAPYRSR+GLSTR  A+SDEIQL+IDPM  DLDDEI GL SQV
Sbjct: 1   MASTSNRTGGGSFYGG-AAPYRSRDGLSTRPVASSDEIQLRIDPMHADLDDEISGLRSQV 60

Query: 61  KRLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIF 120
           K+LRN+A +IG+EAKFQ DFLDQLQMT+IKAQAGVK+N+R+LNK II++GSNH+V VV+F
Sbjct: 61  KQLRNVAQEIGSEAKFQKDFLDQLQMTMIKAQAGVKNNIRKLNKSIIKHGSNHIVHVVLF 120

Query: 121 ALICFFIVYMWMKISRK 137
           AL CFF+VYMW K+SR+
Sbjct: 121 ALFCFFVVYMWSKVSRR 136

[Close]
BLAST of CmaCh09G005820 vs. TrEMBL
Match: A0A061FE80_THECC (Target SNARE coiled-coil domain protein OS=Theobroma cacao GN=TCM_034457 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 9.8e-48
Identity = 97/136 (71.32%), Postives = 116/136 (85.29%), Query Frame = 1 

Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+S R G   + G  APYRSREGLSTR  A+SDEIQL+IDPM  DLDDEI GL SQVK
Sbjct: 1   MASTSNRAGGGSFYGGGAPYRSREGLSTRPVASSDEIQLRIDPMHADLDDEITGLRSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIFA 120
           +LRN+A +IG+EAKFQ DFLDQLQMT+IKAQAGVK+N+R+LNK II++GSNH+V VV+FA
Sbjct: 61  QLRNVAQEIGSEAKFQKDFLDQLQMTVIKAQAGVKNNIRKLNKSIIKHGSNHIVHVVLFA 120

Query: 121 LICFFIVYMWMKISRK 137
           L CFF+VYMW K+SR+
Sbjct: 121 LFCFFVVYMWSKLSRR 136

[Close]
BLAST of CmaCh09G005820 vs. TrEMBL
Match: A0A067KZ44_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15854 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-46
Identity = 98/136 (72.06%), Postives = 119/136 (87.50%), Query Frame = 1 

Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MA+SS RGGS FY G AAPYRS++GLSTR AA+SDEIQL+IDPM  D DDEI GL SQVK
Sbjct: 1   MAASSSRGGS-FYGG-AAPYRSKDGLSTRPAASSDEIQLRIDPMHADFDDEISGLRSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIFA 120
           +LRN+A +IG+EAKFQ DFLDQLQMT+IKAQAGVK+N+R+LNK II+NG NH+V VV+FA
Sbjct: 61  QLRNVAQEIGSEAKFQKDFLDQLQMTVIKAQAGVKNNIRKLNKSIIKNGGNHIVHVVLFA 120

Query: 121 LICFFIVYMWMKISRK 137
           L+CF +VY+W K+SR+
Sbjct: 121 LLCFTVVYLWSKVSRR 134

[Close]
BLAST of CmaCh09G005820 vs. TrEMBL
Match: I3SAI6_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.6e-45
Identity = 98/136 (72.06%), Postives = 119/136 (87.50%), Query Frame = 1 

Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MA++S R GS FY G AAPYRS +GLSTR  AAS+EIQL+IDPM  DLDDE+ GLHSQV+
Sbjct: 1   MAANSQRPGS-FYGG-AAPYRSSDGLSTRPGAASEEIQLRIDPM--DLDDELTGLHSQVR 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIFA 120
           RL+NIA +IGTE K+Q DFL+QLQMT+IKAQAGVK+N+RRLNK IIQ+GSNH+V V++FA
Sbjct: 61  RLKNIAQEIGTEVKYQKDFLEQLQMTMIKAQAGVKNNLRRLNKSIIQSGSNHIVHVILFA 120

Query: 121 LICFFIVYMWMKISRK 137
           L+CFFIVY+W K+SRK
Sbjct: 121 LVCFFIVYLWSKMSRK 132

[Close]
BLAST of CmaCh09G005820 vs. TAIR10
Match: AT4G14600.1 (AT4G14600.1 Target SNARE coiled-coil domain protein)

HSP 1 Score: 177.9 bits (450), Expect = 4.1e-45
Identity = 89/138 (64.49%), Postives = 116/138 (84.06%), Query Frame = 1 

Query: 1   MASSSFRGGS--SFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQ 60
           MAS+  R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH Q
Sbjct: 1   MASNPHRSGAGGSLYGG-AAPYRSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQ 60

Query: 61  VKRLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVI 120
           V++L+NIA +IG+EAKFQ DFLD+LQMTLI+AQAGVK+N+R+LN  II++G+NH++ VV+
Sbjct: 61  VRQLKNIAQEIGSEAKFQRDFLDELQMTLIRAQAGVKNNIRKLNMSIIRSGNNHIMHVVL 120

Query: 121 FALICFFIVYMWMKISRK 137
           FAL+ FF++Y+W K+ ++
Sbjct: 121 FALLVFFVLYIWSKMFKR 137

[Close]
BLAST of CmaCh09G005820 vs. TAIR10
Match: AT1G29060.1 (AT1G29060.1 Target SNARE coiled-coil domain protein)

HSP 1 Score: 174.5 bits (441), Expect = 4.5e-44
Identity = 87/136 (63.97%), Postives = 114/136 (83.82%), Query Frame = 1 

Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV+
Sbjct: 1   MASNRGAGGSLY--GGADPYRSREGLSTRNASGSEEIQLRIDPMHSDLDDEILGLHGQVR 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIFA 120
           +L+NIA +IG+EAK Q DFLD+LQMTLI+AQAGVK+N+R+LN  II++G+NH++ VV+FA
Sbjct: 61  QLKNIAQEIGSEAKSQRDFLDELQMTLIRAQAGVKNNIRKLNLSIIRSGNNHIMHVVLFA 120

Query: 121 LICFFIVYMWMKISRK 137
           L+ FFI+YMW K+ ++
Sbjct: 121 LLLFFILYMWSKMFKR 134

[Close]
BLAST of CmaCh09G005820 vs. NCBI nr
Match: gi|659132416|ref|XP_008466185.1| (PREDICTED: bet1-like protein At1g29060 [Cucumis melo])

HSP 1 Score: 244.2 bits (622), Expect = 1.3e-61
Identity = 125/136 (91.91%), Postives = 131/136 (96.32%), Query Frame = 1 

Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNG+AAP+RSREGLSTR AAASDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIFA 120
           RLRNIA DIGTEAK Q DFLDQLQMTLIKAQAGVK+NVRRLNKKIIQNGSNHV+QVV+FA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120

Query: 121 LICFFIVYMWMKISRK 137
           LICFFIVYMW K+SRK
Sbjct: 121 LICFFIVYMWAKMSRK 136

[Close]
BLAST of CmaCh09G005820 vs. NCBI nr
Match: gi|449436970|ref|XP_004136265.1| (PREDICTED: bet1-like protein At1g29060 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 2.5e-60
Identity = 124/136 (91.18%), Postives = 130/136 (95.59%), Query Frame = 1 

Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MASSSFRGGSSFYNG+AA +RSREGLSTR AA+SDEIQLQIDPMQGDLDDEIVGLHSQVK
Sbjct: 1   MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIFA 120
           RLRNIA DIGTEAK Q DFLDQLQMTLIKAQAGVK+NVRRLNKKIIQNGSNHVVQVV+FA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFIVYMWMKISRK 137
           LICFFIVYMW K+SRK
Sbjct: 121 LICFFIVYMWSKMSRK 136

[Close]
BLAST of CmaCh09G005820 vs. NCBI nr
Match: gi|823238824|ref|XP_012452066.1| (PREDICTED: bet1-like protein At4g14600 [Gossypium raimondii])

HSP 1 Score: 198.0 bits (502), Expect = 1.1e-47
Identity = 101/137 (73.72%), Postives = 120/137 (87.59%), Query Frame = 1 

Query: 1   MASSSFR-GGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQV 60
           MAS+S R GG SFY G AAPYRSR+GLSTR  A+SDEIQL+IDPM  DLDDEI GL SQV
Sbjct: 1   MASTSNRTGGGSFYGG-AAPYRSRDGLSTRPVASSDEIQLRIDPMHADLDDEISGLRSQV 60

Query: 61  KRLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIF 120
           K+LRN+A +IG+EAKFQ DFLDQLQMT+IKAQAGVK+N+R+LNK II++GSNH+V VV+F
Sbjct: 61  KQLRNVAQEIGSEAKFQKDFLDQLQMTMIKAQAGVKNNIRKLNKSIIKHGSNHIVHVVLF 120

Query: 121 ALICFFIVYMWMKISRK 137
           AL CFF+VYMW K+SR+
Sbjct: 121 ALFCFFVVYMWSKVSRR 136

[Close]
BLAST of CmaCh09G005820 vs. NCBI nr
Match: gi|590595753|ref|XP_007018146.1| (Target SNARE coiled-coil domain protein [Theobroma cacao])

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-47
Identity = 97/136 (71.32%), Postives = 116/136 (85.29%), Query Frame = 1 

Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MAS+S R G   + G  APYRSREGLSTR  A+SDEIQL+IDPM  DLDDEI GL SQVK
Sbjct: 1   MASTSNRAGGGSFYGGGAPYRSREGLSTRPVASSDEIQLRIDPMHADLDDEITGLRSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIFA 120
           +LRN+A +IG+EAKFQ DFLDQLQMT+IKAQAGVK+N+R+LNK II++GSNH+V VV+FA
Sbjct: 61  QLRNVAQEIGSEAKFQKDFLDQLQMTVIKAQAGVKNNIRKLNKSIIKHGSNHIVHVVLFA 120

Query: 121 LICFFIVYMWMKISRK 137
           L CFF+VYMW K+SR+
Sbjct: 121 LFCFFVVYMWSKLSRR 136

[Close]
BLAST of CmaCh09G005820 vs. NCBI nr
Match: gi|802570014|ref|XP_012067949.1| (PREDICTED: bet1-like protein At4g14600 [Jatropha curcas])

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-46
Identity = 98/136 (72.06%), Postives = 119/136 (87.50%), Query Frame = 1 

Query: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60
           MA+SS RGGS FY G AAPYRS++GLSTR AA+SDEIQL+IDPM  D DDEI GL SQVK
Sbjct: 1   MAASSSRGGS-FYGG-AAPYRSKDGLSTRPAASSDEIQLRIDPMHADFDDEISGLRSQVK 60

Query: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIFA 120
           +LRN+A +IG+EAKFQ DFLDQLQMT+IKAQAGVK+N+R+LNK II+NG NH+V VV+FA
Sbjct: 61  QLRNVAQEIGSEAKFQKDFLDQLQMTVIKAQAGVKNNIRKLNKSIIKNGGNHIVHVVLFA 120

Query: 121 LICFFIVYMWMKISRK 137
           L+CF +VY+W K+SR+
Sbjct: 121 LLCFTVVYLWSKVSRR 134

The following BLAST results are available for this feature:
BLAST of CmaCh09G005820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BETL1_ARATH7.3e-4464.49Bet1-like protein At4g14600 OS=Arabidopsis thaliana GN=At4g14600 PE=2 SV=1[more]
BETL2_ARATH8.0e-4363.97Bet1-like protein At1g29060 OS=Arabidopsis thaliana GN=At1g29060 PE=2 SV=1[more]
BLAST of CmaCh09G005820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHL4_CUCSA1.7e-6091.18Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889980 PE=4 SV=1[more]
A0A0D2SM53_GOSRA7.5e-4873.72Uncharacterized protein OS=Gossypium raimondii GN=B456_010G036600 PE=4 SV=1[more]
A0A061FE80_THECC9.8e-4871.32Target SNARE coiled-coil domain protein OS=Theobroma cacao GN=TCM_034457 PE=4 SV... [more]
A0A067KZ44_JATCU1.1e-4672.06Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15854 PE=4 SV=1[more]
I3SAI6_LOTJA4.6e-4572.06Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
BLAST of CmaCh09G005820 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14600.14.1e-4564.49 Target SNARE coiled-coil domain protein[more]
AT1G29060.14.5e-4463.97 Target SNARE coiled-coil domain protein[more]
BLAST of CmaCh09G005820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659132416|ref|XP_008466185.1|1.3e-6191.91PREDICTED: bet1-like protein At1g29060 [Cucumis melo][more]
gi|449436970|ref|XP_004136265.1|2.5e-6091.18PREDICTED: bet1-like protein At1g29060 [Cucumis sativus][more]
gi|823238824|ref|XP_012452066.1|1.1e-4773.72PREDICTED: bet1-like protein At4g14600 [Gossypium raimondii][more]
gi|590595753|ref|XP_007018146.1|1.4e-4771.32Target SNARE coiled-coil domain protein [Theobroma cacao][more]
gi|802570014|ref|XP_012067949.1|1.6e-4672.06PREDICTED: bet1-like protein At4g14600 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G005820.1CmaCh09G005820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 37..104
score: 0.
IPR000727Target SNARE coiled-coil homology domainPROFILEPS50192T_SNAREcoord: 42..104
score: 11
NoneNo IPR availableGENE3DG3DSA:1.20.5.110coord: 34..103
score: 2.
NoneNo IPR availablePANTHERPTHR12791GOLGI SNARE BET1-RELATEDcoord: 10..136
score: 8.4
NoneNo IPR availablePANTHERPTHR12791:SF32SUBFAMILY NOT NAMEDcoord: 10..136
score: 8.4
NoneNo IPR availableunknownSSF58038SNARE fusion complexcoord: 37..103
score: 7.85

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh09G005820Cucsa.311760Cucumber (Gy14) v1cgycmaB0854
CmaCh09G005820Cla023040Watermelon (97103) v1cmawmB036
CmaCh09G005820Csa3G889980Cucumber (Chinese Long) v2cmacuB014
CmaCh09G005820MELO3C003542Melon (DHL92) v3.5.1cmameB034
CmaCh09G005820ClCG11G014400Watermelon (Charleston Gray)cmawcgB014
CmaCh09G005820CSPI03G45350Wild cucumber (PI 183967)cmacpiB014
CmaCh09G005820CmoCh01G016770Cucurbita moschata (Rifu)cmacmoB040
CmaCh09G005820CmoCh09G005690Cucurbita moschata (Rifu)cmacmoB027
CmaCh09G005820Lsi04G022650Bottle gourd (USVL1VR-Ls)cmalsiB022
CmaCh09G005820Cp4.1LG02g05310Cucurbita pepo (Zucchini)cmacpeB053
CmaCh09G005820Cp4.1LG06g04130Cucurbita pepo (Zucchini)cmacpeB060
CmaCh09G005820MELO3C003542.2Melon (DHL92) v3.6.1cmamedB033
CmaCh09G005820CsaV3_3G047800Cucumber (Chinese Long) v3cmacucB0021
CmaCh09G005820Cla97C11G220410Watermelon (97103) v2cmawmbB019
CmaCh09G005820Bhi09G002097Wax gourdcmawgoB0026
CmaCh09G005820CsGy3G042830Cucumber (Gy14) v2cgybcmaB285
CmaCh09G005820Carg02995Silver-seed gourdcarcmaB0889
CmaCh09G005820Carg26972Silver-seed gourdcarcmaB0809
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh09G005820CmaCh01G016320Cucurbita maxima (Rimu)cmacmaB044
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G005820Melon (DHL92) v3.6.1cmamedB030
CmaCh09G005820Silver-seed gourdcarcmaB0071
CmaCh09G005820Cucumber (Chinese Long) v3cmacucB0013
CmaCh09G005820Cucumber (Chinese Long) v3cmacucB0014
CmaCh09G005820Watermelon (97103) v2cmawmbB039
CmaCh09G005820Watermelon (97103) v2cmawmbB041
CmaCh09G005820Wax gourdcmawgoB0021
CmaCh09G005820Cucurbita maxima (Rimu)cmacmaB035
CmaCh09G005820Cucurbita moschata (Rifu)cmacmoB034
CmaCh09G005820Cucurbita moschata (Rifu)cmacmoB060
CmaCh09G005820Melon (DHL92) v3.5.1cmameB049
CmaCh09G005820Cucurbita pepo (Zucchini)cmacpeB029
CmaCh09G005820Cucurbita pepo (Zucchini)cmacpeB066
CmaCh09G005820Bottle gourd (USVL1VR-Ls)cmalsiB037
CmaCh09G005820Cucumber (Gy14) v2cgybcmaB145
CmaCh09G005820Cucumber (Gy14) v2cgybcmaB146