CmaCh09G005060 (gene) Cucurbita maxima (Rimu)

NameCmaCh09G005060
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionGGL domain protein
LocationCma_Chr09 : 2278141 .. 2279447 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTTCTCCCTCAATTGTCAAAATCTCCTTCCTCATCAAACAGGGAACCAGAAGAAGAACAAGACAGAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGAGAGGCGGAGAGAGAGGAAGAGGGCAAAAAGGCATACCTTAAGCAGCAACTGTAGTTCAGAAATTGCTTTTTTCTGATCTTTTGGTGTTACTTTTTTCACAGGGTTTTGACTGTCCACTTTATTCCTTTTCATCATAATCTCATCTCTTTTTCTTCTTTCTTCAATTATTCCAATTACATCACAAAAACACACATAAAACCTTGCTTTCATCATTTGTTTCCAGCTTTGGCCGCACCATTTCTTCACCTTTTTGAATGTTTTATAATATTCTCACCTTCCCCGCCCACCTTTTTCCTCACAAAACAACCTATAGTTCTTCTCCTTCTCTTCAATTCCCCTTGCTTTTCTAAGATTCCTGTATTTCTCTCTATTCTGCGATTTATCGTAACAGATAAGGAGTTCTGAATTTGATTTATTACCTGAAAGTTGCAACAATGGATGATGATAAACAGCACCAGTCACAGCCGATGTCCTCGCCGTCGCCGTCTGGAGAAGAGTCAGCGAAGAGACAAGAAGGAGTCAATTCAGAAACCAAATCAAAATCTGCAGTTCGGAGCAAGAACACCTTCTTTGGCAGACATAGAATCTCAGCGGCCATAACCAGACTCCAAAACGAAATCAATATCATCGAGGTGATCGCTATTTCGTTTACGATTCACAGATTTACCTTAATCGGACAATAAAATCCATATCTCCAGCCACGATTCTTTTCCCTCTGAGATTAAATACGATAATTTACCGTAATAATGCAGGAAGAATTGCGACAGCTCGAGAGCATAGGCGAATCCTCCACCGTCTGCGAAGAGTAAGCAAATAAATCAATTCCTTAGGGTTTCGAAAAATTCCTAATAGTTTAGGATCATCGTCTCCACTAATTTCTTCTCCTGTTTACGCACAGCCTCGTCTCCAGCGTCGTAGCGATTCCAGATCCTCTGCTTCCAGAGTAAGATTAAATCACCGTCAACACTAATTATCGATCTTCAAATAAAATGACAATTTCTTCCCCTAATCAACGAAGAATGATTCATCATATGCAGAACAATCGGTCCAACGGACGTCAACTGGGACCAGTGGTTCCGAGGAGCTCACGGCGGTCGCAACCACAGACGGTGGATCTGATTCCGAACACACAGGGAGATCCATTTTGGGGATCGCCGTTGATTTACAGGGGTTTGAGATCAACTAGTCCTGATCGATTGCAGCCATAA

mRNA sequence

CTTCTTCTCCCTCAATTGTCAAAATCTCCTTCCTCATCAAACAGGGAACCAGAAGAAGAACAAGACAGAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGAGAGGCGGAGAGAGAGGAAGAGGGCAAAAAGGCATACCTTAAGCAGCAACTGTAGTTCAGAAATTGCTTTTTTCTGATCTTTTGGTGTTACTTTTTTCACAGGGTTTTGACTGTCCACTTTATTCCTTTTCATCATAATCTCATCTCTTTTTCTTCTTTCTTCAATTATTCCAATTACATCACAAAAACACACATAAAACCTTGCTTTCATCATTTGTTTCCAGCTTTGGCCGCACCATTTCTTCACCTTTTTGAATGTTTTATAATATTCTCACCTTCCCCGCCCACCTTTTTCCTCACAAAACAACCTATAGTTCTTCTCCTTCTCTTCAATTCCCCTTGCTTTTCTAAGATTCCTGTATTTCTCTCTATTCTGCGATTTATCGTAACAGATAAGGAGTTCTGAATTTGATTTATTACCTGAAAGTTGCAACAATGGATGATGATAAACAGCACCAGTCACAGCCGATGTCCTCGCCGTCGCCGTCTGGAGAAGAGTCAGCGAAGAGACAAGAAGGAGTCAATTCAGAAACCAAATCAAAATCTGCAGTTCGGAGCAAGAACACCTTCTTTGGCAGACATAGAATCTCAGCGGCCATAACCAGACTCCAAAACGAAATCAATATCATCGAGGAAGAATTGCGACAGCTCGAGAGCATAGGCGAATCCTCCACCGTCTGCGAAGACCTCGTCTCCAGCGTCGTAGCGATTCCAGATCCTCTGCTTCCAGAAATGATTCATCATATGCAGAACAATCGGTCCAACGGACGTCAACTGGGACCAGTGGTTCCGAGGAGCTCACGGCGGTCGCAACCACAGACGGTGGATCTGATTCCGAACACACAGGGAGATCCATTTTGGGGATCGCCGTTGATTTACAGGGGTTTGAGATCAACTAGTCCTGATCGATTGCAGCCATAA

Coding sequence (CDS)

ATGGATGATGATAAACAGCACCAGTCACAGCCGATGTCCTCGCCGTCGCCGTCTGGAGAAGAGTCAGCGAAGAGACAAGAAGGAGTCAATTCAGAAACCAAATCAAAATCTGCAGTTCGGAGCAAGAACACCTTCTTTGGCAGACATAGAATCTCAGCGGCCATAACCAGACTCCAAAACGAAATCAATATCATCGAGGAAGAATTGCGACAGCTCGAGAGCATAGGCGAATCCTCCACCGTCTGCGAAGACCTCGTCTCCAGCGTCGTAGCGATTCCAGATCCTCTGCTTCCAGAAATGATTCATCATATGCAGAACAATCGGTCCAACGGACGTCAACTGGGACCAGTGGTTCCGAGGAGCTCACGGCGGTCGCAACCACAGACGGTGGATCTGATTCCGAACACACAGGGAGATCCATTTTGGGGATCGCCGTTGATTTACAGGGGTTTGAGATCAACTAGTCCTGATCGATTGCAGCCATAA

Protein sequence

MDDDKQHQSQPMSSPSPSGEESAKRQEGVNSETKSKSAVRSKNTFFGRHRISAAITRLQNEINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLPEMIHHMQNNRSNGRQLGPVVPRSSRRSQPQTVDLIPNTQGDPFWGSPLIYRGLRSTSPDRLQP
BLAST of CmaCh09G005060 vs. Swiss-Prot
Match: GG2_ARATH (Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis thaliana GN=GG2 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-07
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1

Query: 47  GRHRISAAITRLQNEINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLPE 100
           G+HRI A + RL+ E   +EEEL QLE +  +S  C++ + SV + PDPLLPE
Sbjct: 21  GKHRIQAELKRLEQEARFLEEELEQLEKMDNASASCKEFLDSVDSKPDPLLPE 73

BLAST of CmaCh09G005060 vs. Swiss-Prot
Match: GG1_ARATH (Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana GN=GG1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.2e-06
Identity = 24/52 (46.15%), Postives = 38/52 (73.08%), Query Frame = 1

Query: 47 GRHRISAAITRLQNEINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLP 99
          G+HRI A + R++ E+  +E+EL+++E+    STVCE+L+S +   PDPLLP
Sbjct: 19 GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLP 70

BLAST of CmaCh09G005060 vs. TrEMBL
Match: A0A0A0LJE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881640 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.9e-21
Identity = 67/106 (63.21%), Postives = 79/106 (74.53%), Query Frame = 1

Query: 4   DKQHQSQPMSSPSPSG--------EESAKRQEGVNSETKSKSAVRSKNTFFGRHRISAAI 63
           D+ HQS P SSPSPS         + + + QE VN E KSKS  ++ NTFFGRHRI+AAI
Sbjct: 3   DELHQSDPPSSPSPSPPPPPLPPRQLAKEEQEEVNPEIKSKSRCKN-NTFFGRHRITAAI 62

Query: 64  TRLQNEINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLPEMI 102
            RLQNEINII+EEL+QLE+IGESSTVC   +SSV +IPDPLLPE I
Sbjct: 63  NRLQNEINIIKEELQQLENIGESSTVCAGFISSVESIPDPLLPETI 107

BLAST of CmaCh09G005060 vs. TrEMBL
Match: B9H7G6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s20180g PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.5e-13
Identity = 47/83 (56.63%), Postives = 60/83 (72.29%), Query Frame = 1

Query: 16 SPSGEESAKRQEGVNSETKSKSAVRSKNTFFGRHRISAAITRLQNEINIIEEELRQLESI 75
          S S  E  KR+E V +ET S       N F  +HR+ AAIT+LQN+IN I+EEL QL+++
Sbjct: 13 SVSSLEEPKREESVVAETSSFIPRTRPNNFLSKHRMVAAITQLQNQINFIQEELDQLDTL 72

Query: 76 GESSTVCEDLVSSVVAIPDPLLP 99
          GESS VCE+L+SSV +IPDPLLP
Sbjct: 73 GESSIVCEELLSSVESIPDPLLP 95

BLAST of CmaCh09G005060 vs. TrEMBL
Match: A9PJY5_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.2e-13
Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 1

Query: 16 SPSGEESAKRQEGVNSETKSKSAVRSKNTFFGRHRISAAITRLQNEINIIEEELRQLESI 75
          S S  E  KR+E V +ET S       N F  +HR+ AAIT+LQN+IN I+EEL QL+++
Sbjct: 13 SVSSLEEPKREESVVAETSSFIPRTGPNNFLSKHRMVAAITQLQNQINFIQEELDQLDTL 72

Query: 76 GESSTVCEDLVSSVVAIPDPLLP 99
          GESS VC++L+SSV +IPDPLLP
Sbjct: 73 GESSIVCQELLSSVESIPDPLLP 95

BLAST of CmaCh09G005060 vs. TrEMBL
Match: K7LQ27_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.6e-12
Identity = 36/54 (66.67%), Postives = 48/54 (88.89%), Query Frame = 1

Query: 45 FFGRHRISAAITRLQNEINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLP 99
          F G+HR+ AAIT L N+I+I++EEL ++E+IGESSTVC+DL+SSV +IPDPLLP
Sbjct: 3  FIGKHRLQAAITNLNNQISILQEELEKVETIGESSTVCKDLISSVESIPDPLLP 56

BLAST of CmaCh09G005060 vs. TrEMBL
Match: I3SQN8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-11
Identity = 40/81 (49.38%), Postives = 59/81 (72.84%), Query Frame = 1

Query: 18 SGEESAKRQEGVNSETKSKSAVRSKNTFFGRHRISAAITRLQNEINIIEEELRQLESIGE 77
          S E    R+   +   +  +   S+  F+G+HR+ AAI++L N+I+I+EEEL+QLE+IGE
Sbjct: 6  SSEAENGRESSEDCRERDPAHPLSQTAFYGKHRLQAAISQLNNQISIMEEELKQLETIGE 65

Query: 78 SSTVCEDLVSSVVAIPDPLLP 99
          SS VC+D++SSV +IPDPLLP
Sbjct: 66 SSIVCKDVISSVESIPDPLLP 86

BLAST of CmaCh09G005060 vs. TAIR10
Match: AT3G22942.1 (AT3G22942.1 G-protein gamma subunit 2)

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-08
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1

Query: 47  GRHRISAAITRLQNEINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLPE 100
           G+HRI A + RL+ E   +EEEL QLE +  +S  C++ + SV + PDPLLPE
Sbjct: 21  GKHRIQAELKRLEQEARFLEEELEQLEKMDNASASCKEFLDSVDSKPDPLLPE 73

BLAST of CmaCh09G005060 vs. TAIR10
Match: AT3G63420.1 (AT3G63420.1 Ggamma-subunit 1)

HSP 1 Score: 53.1 bits (126), Expect = 1.8e-07
Identity = 24/52 (46.15%), Postives = 38/52 (73.08%), Query Frame = 1

Query: 47 GRHRISAAITRLQNEINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLP 99
          G+HRI A + R++ E+  +E+EL+++E+    STVCE+L+S +   PDPLLP
Sbjct: 19 GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLP 70

BLAST of CmaCh09G005060 vs. NCBI nr
Match: gi|659132699|ref|XP_008466337.1| (PREDICTED: guanine nucleotide-binding protein subunit gamma 2-like [Cucumis melo])

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-21
Identity = 68/104 (65.38%), Postives = 77/104 (74.04%), Query Frame = 1

Query: 4   DKQHQSQPMSSPSPSGEESAKRQ------EGVNSETKSKSAVRSKNTFFGRHRISAAITR 63
           D+ HQS P SSPSPS      RQ      E VN E KSKS  ++ NTFFGRHRI+AAI R
Sbjct: 3   DELHQSHPPSSPSPSPSPPPPRQSPKEEQEEVNPEIKSKSRCKN-NTFFGRHRITAAINR 62

Query: 64  LQNEINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLPEMI 102
           LQNEINII+EEL+QLE+IGESSTVC   +SSV +IPDPLLPE I
Sbjct: 63  LQNEINIIKEELQQLENIGESSTVCAGFISSVESIPDPLLPETI 105

BLAST of CmaCh09G005060 vs. NCBI nr
Match: gi|449437086|ref|XP_004136323.1| (PREDICTED: guanine nucleotide-binding protein subunit gamma 2-like [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 2.7e-21
Identity = 67/106 (63.21%), Postives = 79/106 (74.53%), Query Frame = 1

Query: 4   DKQHQSQPMSSPSPSG--------EESAKRQEGVNSETKSKSAVRSKNTFFGRHRISAAI 63
           D+ HQS P SSPSPS         + + + QE VN E KSKS  ++ NTFFGRHRI+AAI
Sbjct: 3   DELHQSDPPSSPSPSPPPPPLPPRQLAKEEQEEVNPEIKSKSRCKN-NTFFGRHRITAAI 62

Query: 64  TRLQNEINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLPEMI 102
            RLQNEINII+EEL+QLE+IGESSTVC   +SSV +IPDPLLPE I
Sbjct: 63  NRLQNEINIIKEELQQLENIGESSTVCAGFISSVESIPDPLLPETI 107

BLAST of CmaCh09G005060 vs. NCBI nr
Match: gi|1009136087|ref|XP_015885345.1| (PREDICTED: guanine nucleotide-binding protein subunit gamma 1-like [Ziziphus jujuba])

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-14
Identity = 54/106 (50.94%), Postives = 75/106 (70.75%), Query Frame = 1

Query: 1   MDDDKQHQSQPMSSPSPSGEESA---KRQEG-----VNSETKSKSAVRSKNTFFGRHRIS 60
           M+   Q+QS+P SS S S   S    KR++      + SE K+K+A  +  TFFG+HR++
Sbjct: 1   MEHHDQNQSKPSSSSSSSSPGSGGGTKREDEEVPLPLQSEDKAKAAAATYPTFFGKHRMT 60

Query: 61  AAITRLQNEINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLP 99
           AAI+ LQN+INII++EL QLE++G SS VC++LVSSV  +PDPLLP
Sbjct: 61  AAISHLQNQINIIQDELNQLETLGVSSIVCKELVSSVGNVPDPLLP 106

BLAST of CmaCh09G005060 vs. NCBI nr
Match: gi|224084910|ref|XP_002307445.1| (hypothetical protein POPTR_0005s20180g [Populus trichocarpa])

HSP 1 Score: 83.6 bits (205), Expect = 3.5e-13
Identity = 47/83 (56.63%), Postives = 60/83 (72.29%), Query Frame = 1

Query: 16 SPSGEESAKRQEGVNSETKSKSAVRSKNTFFGRHRISAAITRLQNEINIIEEELRQLESI 75
          S S  E  KR+E V +ET S       N F  +HR+ AAIT+LQN+IN I+EEL QL+++
Sbjct: 13 SVSSLEEPKREESVVAETSSFIPRTRPNNFLSKHRMVAAITQLQNQINFIQEELDQLDTL 72

Query: 76 GESSTVCEDLVSSVVAIPDPLLP 99
          GESS VCE+L+SSV +IPDPLLP
Sbjct: 73 GESSIVCEELLSSVESIPDPLLP 95

BLAST of CmaCh09G005060 vs. NCBI nr
Match: gi|118489776|gb|ABK96688.1| (unknown [Populus trichocarpa x Populus deltoides])

HSP 1 Score: 82.8 bits (203), Expect = 6.0e-13
Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 1

Query: 16 SPSGEESAKRQEGVNSETKSKSAVRSKNTFFGRHRISAAITRLQNEINIIEEELRQLESI 75
          S S  E  KR+E V +ET S       N F  +HR+ AAIT+LQN+IN I+EEL QL+++
Sbjct: 13 SVSSLEEPKREESVVAETSSFIPRTGPNNFLSKHRMVAAITQLQNQINFIQEELDQLDTL 72

Query: 76 GESSTVCEDLVSSVVAIPDPLLP 99
          GESS VC++L+SSV +IPDPLLP
Sbjct: 73 GESSIVCQELLSSVESIPDPLLP 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
GG2_ARATH3.8e-0749.06Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis thaliana GN=GG... [more]
GG1_ARATH3.2e-0646.15Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana GN=GG... [more]
Match NameE-valueIdentityDescription
A0A0A0LJE8_CUCSA1.9e-2163.21Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881640 PE=4 SV=1[more]
B9H7G6_POPTR2.5e-1356.63Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s20180g PE=4 SV=1[more]
A9PJY5_9ROSI4.2e-1355.42Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2... [more]
K7LQ27_SOYBN4.6e-1266.67Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I3SQN8_LOTJA1.0e-1149.38Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT3G22942.12.1e-0849.06 G-protein gamma subunit 2[more]
AT3G63420.11.8e-0746.15 Ggamma-subunit 1[more]
Match NameE-valueIdentityDescription
gi|659132699|ref|XP_008466337.1|1.2e-2165.38PREDICTED: guanine nucleotide-binding protein subunit gamma 2-like [Cucumis melo... [more]
gi|449437086|ref|XP_004136323.1|2.7e-2163.21PREDICTED: guanine nucleotide-binding protein subunit gamma 2-like [Cucumis sati... [more]
gi|1009136087|ref|XP_015885345.1|5.4e-1450.94PREDICTED: guanine nucleotide-binding protein subunit gamma 1-like [Ziziphus juj... [more]
gi|224084910|ref|XP_002307445.1|3.5e-1356.63hypothetical protein POPTR_0005s20180g [Populus trichocarpa][more]
gi|118489776|gb|ABK96688.1|6.0e-1355.42unknown [Populus trichocarpa x Populus deltoides][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015898G-protein_gamma-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004871signal transducer activity
Vocabulary: Cellular Component
TermDefinition
GO:0005834heterotrimeric G-protein complex
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0005834 heterotrimeric G-protein complex
molecular_function GO:0004871 signal transducer activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G005060.1CmaCh09G005060.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015898G-protein gamma-like domainPFAMPF00631G-gammacoord: 57..105
score: 3.
NoneNo IPR availableunknownCoilCoilcoord: 48..75
scor
NoneNo IPR availablePANTHERPTHR35129FAMILY NOT NAMEDcoord: 7..98
score: 1.4
NoneNo IPR availablePANTHERPTHR35129:SF1SUBFAMILY NOT NAMEDcoord: 7..98
score: 1.4

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh09G005060CmaCh01G015540Cucurbita maxima (Rimu)cmacmaB059