Cp4.1LG02g04680 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGGGCAAAAGAGGCATACCTTATTACAACTCTAGTCCTTTTCTTCGAGTTTTTGAGACTCTCCGCTTTATTCCCTTTTCATCGTAATCTCATCTCTTCCTTCTTCAATTATTCCAATCACATCAAACATTTGCACAAATTAACTCTTCAATTCCATTTGATTCTTTCCCCTTTCTCCTTCTCTATATTAATTTCCAAGACTTTCTCACCGTTGTTGTTGAATCTGAGTGCTGTGATTTGATTTGCCTGCAACAATGGATGAACACCACCAATCACCGCCGGGAGGTGGAGGAGAAAAATCGGCGAAGCGAGAAGAAGATGAAGAAGTCAGTTCAGAAGCCGAAGCCGAAGCCGAAGCGAAATCTAAATCCAAATCTGCCGCTCCGTGCAAGAACAGTTTCTTTGGTAGACATAGAATCTCAGCGGCCATTAACAGACTCCAAAACGAAATCAATATCATCGAGGTGATTACTATTTCGTTTTTCGATTCATATTTGCCTTAATCGGTTAATAATTCCATGTTTTCAGTCATTTTTTCCACTCTGAAACTAAAGACGAGGATAAATCGTGATGCAGGAAGAATTGCAACAGCTTGAGAGCGTAGGCGAATCCTCCACCGTCTGCAAAGAGTAAGAACTAAGCTGATTAATCAATTTATTAGGTTTACGAAAAAATTACAAATCATTTATATACTCATTTTCGAAACGAAATCATCGTCGCCATTACTCTAGGGCTTAATTTCTTCACCTGTTTACGTACAGACTCGTCTCGAGCGTTGAATCGGTTCCCGATCCTCTGCTTTCAGAGTAAGATTATCACCATTAACATTGATTATCGATCTTCAATTTATATGATAATTTCTTCCCCTAATCAACGAAGAATGATTCAAAATATACAGAACAATCGGCCCGCCGGACGTCAACTGGGACCAGTGGTTCCGAGGAGCTCACGACGGCCGCAACCACAGACGGTGGATCTGATTCCGAACACTCGAAGAGATCCATTTTGCGGTCGCCATTGATTTGTAGGTCTTTAGGACCATCCTTTTCTAATCGGTTGCCGCCATAACCAGAACGTGGAGAAGAAAAGAGAAGACTTGGGACATCGAAACGACGACGTCCCAATCGCGCGTGTACAAGTTTTTAGGTTCGATAATTTATTGTTGCTATTCTTAGAAGGAAAATTTAACTATTGCCACGTAGTATTTGCCTTTTTTTTTTTTTAATTTTTAATTTCACTTTATAATTAACATTTGTCTTAATGTCCCGACAATCTTGTTATTAAACTGATTAAATCGTTATAAATTTTAAAATCTTAT AAGGGCAAAAGAGGCATACCTTATTACAACTCTAGTCCTTTTCTTCGAGTTTTTGAGACTCTCCGCTTTATTCCCTTTTCATCGTAATCTCATCTCTTCCTTCTTCAATTATTCCAATCACATCAAACATTTGCACAAATTAACTCTTCAATTCCATTTGATTCTTTCCCCTTTCTCCTTCTCTATATTAATTTCCAAGACTTTCTCACCGTTGTTGTTGAATCTGAGTGCTGTGATTTGATTTGCCTGCAACAATGGATGAACACCACCAATCACCGCCGGGAGGTGGAGGAGAAAAATCGGCGAAGCGAGAAGAAGATGAAGAAGTCAGTTCAGAAGCCGAAGCCGAAGCCGAAGCGAAATCTAAATCCAAATCTGCCGCTCCGTGCAAGAACAGTTTCTTTGGTAGACATAGAATCTCAGCGGCCATTAACAGACTCCAAAACGAAATCAATATCATCGAGGAAGAATTGCAACAGCTTGAGAGCGTAGGCGAATCCTCCACCGTCTGCAAAGAACTCGTCTCGAGCGTTGAATCGGTTCCCGATCCTCTGCTTTCAGAAACAATCGGCCCGCCGGACGTCAACTGGGACCAGTGGTTCCGAGGAGCTCACGACGGCCGCAACCACAGACGGTGGATCTGATTCCGAACACTCGAAGAGATCCATTTTGCGGTCGCCATTGATTTGTAGGTCTTTAGGACCATCCTTTTCTAATCGGTTGCCGCCATAACCAGAACGTGGAGAAGAAAAGAGAAGACTTGGGACATCGAAACGACGACGTCCCAATCGCGCGTGTACAAGTTTTTAGGTTCGATAATTTATTGTTGCTATTCTTAGAAGGAAAATTTAACTATTGCCACGTAGTATTTGCCTTTTTTTTTTTTTAATTTTTAATTTCACTTTATAATTAACATTTGTCTTAATGTCCCGACAATCTTGTTATTAAACTGATTAAATCGTTATAAATTTTAAAATCTTAT ATGGATGAACACCACCAATCACCGCCGGGAGGTGGAGGAGAAAAATCGGCGAAGCGAGAAGAAGATGAAGAAGTCAGTTCAGAAGCCGAAGCCGAAGCCGAAGCGAAATCTAAATCCAAATCTGCCGCTCCGTGCAAGAACAGTTTCTTTGGTAGACATAGAATCTCAGCGGCCATTAACAGACTCCAAAACGAAATCAATATCATCGAGGAAGAATTGCAACAGCTTGAGAGCGTAGGCGAATCCTCCACCGTCTGCAAAGAACTCGTCTCGAGCGTTGAATCGGTTCCCGATCCTCTGCTTTCAGAAACAATCGGCCCGCCGGACGTCAACTGGGACCAGTGGTTCCGAGGAGCTCACGACGGCCGCAACCACAGACGGTGGATCTGA MDEHHQSPPGGGGEKSAKREEDEEVSSEAEAEAEAKSKSKSAAPCKNSFFGRHRISAAINRLQNEINIIEEELQQLESVGESSTVCKELVSSVESVPDPLLSETIGPPDVNWDQWFRGAHDGRNHRRWI
BLAST of Cp4.1LG02g04680 vs. Swiss-Prot
Match: GG2_ARATH (Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis thaliana GN=GG2 PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.4e-15 Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. Swiss-Prot
Match: GG1_ARATH (Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana GN=GG1 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12 Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. Swiss-Prot
Match: GG1_ORYSI (Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. indica GN=RGG1 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11 Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. Swiss-Prot
Match: GG1_ORYSJ (Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. japonica GN=RGG1 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11 Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. Swiss-Prot
Match: GG2_ORYSJ (Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. japonica GN=RGG2 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.2e-10 Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. TrEMBL
Match: A0A0A0LJE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881640 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.4e-32 Identity = 82/129 (63.57%), Postives = 92/129 (71.32%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. TrEMBL
Match: A0A151TZE6_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_004979 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.7e-23 Identity = 60/116 (51.72%), Postives = 81/116 (69.83%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. TrEMBL
Match: K7LQ27_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.6e-23 Identity = 50/81 (61.73%), Postives = 66/81 (81.48%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. TrEMBL
Match: A0A059BDS6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G01916 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.3e-22 Identity = 54/106 (50.94%), Postives = 77/106 (72.64%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. TrEMBL
Match: I3SQN8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 4.0e-22 Identity = 57/109 (52.29%), Postives = 80/109 (73.39%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. TAIR10
Match: AT3G22942.1 (AT3G22942.1 G-protein gamma subunit 2) HSP 1 Score: 84.0 bits (206), Expect = 7.6e-17 Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. TAIR10
Match: AT3G63420.1 (AT3G63420.1 Ggamma-subunit 1) HSP 1 Score: 74.3 bits (181), Expect = 6.0e-14 Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. NCBI nr
Match: gi|659132699|ref|XP_008466337.1| (PREDICTED: guanine nucleotide-binding protein subunit gamma 2-like [Cucumis melo]) HSP 1 Score: 150.6 bits (379), Expect = 1.9e-33 Identity = 84/129 (65.12%), Postives = 94/129 (72.87%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. NCBI nr
Match: gi|449437086|ref|XP_004136323.1| (PREDICTED: guanine nucleotide-binding protein subunit gamma 2-like [Cucumis sativus]) HSP 1 Score: 147.1 bits (370), Expect = 2.1e-32 Identity = 82/129 (63.57%), Postives = 92/129 (71.32%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. NCBI nr
Match: gi|1009136087|ref|XP_015885345.1| (PREDICTED: guanine nucleotide-binding protein subunit gamma 1-like [Ziziphus jujuba]) HSP 1 Score: 127.9 bits (320), Expect = 1.3e-26 Identity = 71/123 (57.72%), Postives = 91/123 (73.98%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. NCBI nr
Match: gi|1012361208|gb|KYP72391.1| (hypothetical protein KK1_004979 [Cajanus cajan]) HSP 1 Score: 116.3 bits (290), Expect = 3.9e-23 Identity = 60/116 (51.72%), Postives = 81/116 (69.83%), Query Frame = 1
BLAST of Cp4.1LG02g04680 vs. NCBI nr
Match: gi|645225950|ref|XP_008219813.1| (PREDICTED: guanine nucleotide-binding protein subunit gamma 1-like [Prunus mume]) HSP 1 Score: 114.8 bits (286), Expect = 1.1e-22 Identity = 61/123 (49.59%), Postives = 85/123 (69.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |