CmaCh09G002350 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G002350
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTranscription factor, putative
LocationCma_Chr09 : 1010148 .. 1010855 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATGATGATCTGAAATCGGAGGATCAGATGGAGATTATGATGATGATGCAACAAATGGAGAAAATCCCTGAATTTTACAATCATCTCTCACCGCCGTCTGATCATTTCAGCTCAAGCACCACCGACCCACATTGCCTGGAAACCCTTCAACAAGCCGCAGAGTCCTCGTCGCCTCCATTCACCAACAACCTACCTTATAATTTGCCTCAAACTGTTCCATTCCCCACCAGTTCACGGTGGCGAAACTCTGGCGGTGAAACGGACTTGCAGAAACAGAGGTCGGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATTCAGATAGACCCAGAAGCGGTGAAGCCACCGAAGAGGAGGAACGTCAAGATTTCAACTGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGAGAATTAGCGAGAGAATTAGGATACTCCAAAGATTGGTCCCTGGAGGTACCAAAATGGATACCGCTTCTATGTTGGATGAGGCTATACATTACGTAAAATTCTTGAAGACCCAAGTGCAATCCCTCGAAAGAGCCGCCACCAACAGGCCACTCCCTGATGCTGCTGCACCAGCATCTGGCGTAGGGTTTCCTCTGGAAATGTCAAGTGGCAGCTATGTCCCCATGGCCAAACCATCCCAAATGACTCACAACCTTGAGCAGTACGGAGATGCTTAA

mRNA sequence

ATGGAAAATGATGATCTGAAATCGGAGGATCAGATGGAGATTATGATGATGATGCAACAAATGGAGAAAATCCCTGAATTTTACAATCATCTCTCACCGCCGTCTGATCATTTCAGCTCAAGCACCACCGACCCACATTGCCTGGAAACCCTTCAACAAGCCGCAGAGTCCTCGTCGCCTCCATTCACCAACAACCTACCTTATAATTTGCCTCAAACTGTTCCATTCCCCACCAGTTCACGGTGGCGAAACTCTGGCGGTGAAACGGACTTGCAGAAACAGAGGTCGGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATTCAGATAGACCCAGAAGCGGTGAAGCCACCGAAGAGGAGGAACGTCAAGATTTCAACTGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGAGAATTAGCGAGAGAATTAGGATACTCCAAAGATTGGTCCCTGGAGGTACCAAAATGGATACCGCTTCTATGTTGGATGAGGCTATACATTACGTAAAATTCTTGAAGACCCAAGTGCAATCCCTCGAAAGAGCCGCCACCAACAGGCCACTCCCTGATGCTGCTGCACCAGCATCTGGCGTAGGGTTTCCTCTGGAAATGTCAAGTGGCAGCTATGTCCCCATGGCCAAACCATCCCAAATGACTCACAACCTTGAGCAGTACGGAGATGCTTAA

Coding sequence (CDS)

ATGGAAAATGATGATCTGAAATCGGAGGATCAGATGGAGATTATGATGATGATGCAACAAATGGAGAAAATCCCTGAATTTTACAATCATCTCTCACCGCCGTCTGATCATTTCAGCTCAAGCACCACCGACCCACATTGCCTGGAAACCCTTCAACAAGCCGCAGAGTCCTCGTCGCCTCCATTCACCAACAACCTACCTTATAATTTGCCTCAAACTGTTCCATTCCCCACCAGTTCACGGTGGCGAAACTCTGGCGGTGAAACGGACTTGCAGAAACAGAGGTCGGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATTCAGATAGACCCAGAAGCGGTGAAGCCACCGAAGAGGAGGAACGTCAAGATTTCAACTGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGAGAATTAGCGAGAGAATTAGGATACTCCAAAGATTGGTCCCTGGAGGTACCAAAATGGATACCGCTTCTATGTTGGATGAGGCTATACATTACGTAAAATTCTTGAAGACCCAAGTGCAATCCCTCGAAAGAGCCGCCACCAACAGGCCACTCCCTGATGCTGCTGCACCAGCATCTGGCGTAGGGTTTCCTCTGGAAATGTCAAGTGGCAGCTATGTCCCCATGGCCAAACCATCCCAAATGACTCACAACCTTGAGCAGTACGGAGATGCTTAA

Protein sequence

MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAPASGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA
Homology
[Close]
BLAST of CmaCh09G002350 vs. Swiss-Prot
Match: HEC2_ARATH (Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-46
Identity = 117/199 (58.79%), Postives = 136/199 (68.34%), Query Frame = 1 

Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSP-PSDH----FSSSTTDPHCLETLQQAA 60
           M+N D+         MMMQQMEK+PE +++ +P P+ H     S S T P          
Sbjct: 1   MDNSDILMN------MMMQQMEKLPEHFSNSNPNPNPHNIMMLSESNTHPFFFNPTH--- 60

Query: 61  ESSSPPFTNNLPYNLP----QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQ 120
             S  PF   +P++ P    +  P P+SS     GG +D     ++AAMREMIFRIAVMQ
Sbjct: 61  --SHLPFDQTMPHHQPGLNFRYAPSPSSSLPEKRGGCSD---NANMAAMREMIFRIAVMQ 120

Query: 121 PIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 180
           PI IDPE+VKPPKR+NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE
Sbjct: 121 PIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 180

Query: 181 AIHYVKFLKTQVQSLERAA 191
           AIHYVKFLK QVQSLE  A
Sbjct: 181 AIHYVKFLKKQVQSLEEHA 185

[Close]
BLAST of CmaCh09G002350 vs. Swiss-Prot
Match: HEC1_ARATH (Transcription factor HEC1 OS=Arabidopsis thaliana GN=HEC1 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.0e-42
Identity = 112/186 (60.22%), Postives = 122/186 (65.59%), Query Frame = 1 

Query: 16  MMMQQMEKIPEFYNHLSPPSDHFSS--STTDPHCLETLQQAAESS---SPPFT------N 75
           MMM QMEK+PEF N   P S  FS   + T P    +    ++ S    P F        
Sbjct: 8   MMMHQMEKLPEFCN---PNSSFFSPDHNNTYPFLFNSTHYQSDHSMTNEPGFRYGSGLLT 67

Query: 76  NLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPK 135
           N     P T         RN+    +     ++AAMREMIFRIAVMQPI IDPEAVKPPK
Sbjct: 68  NPSSISPNTAYSSVFLDKRNNSNNNN--NGTNMAAMREMIFRIAVMQPIHIDPEAVKPPK 127

Query: 136 RRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 191
           RRNV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQ
Sbjct: 128 RRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQ 187

[Close]
BLAST of CmaCh09G002350 vs. Swiss-Prot
Match: HEC3_ARATH (Transcription factor HEC3 OS=Arabidopsis thaliana GN=HEC3 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.8e-32
Identity = 83/168 (49.40%), Postives = 102/168 (60.71%), Query Frame = 1 

Query: 29  NHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGE 88
           N+ +   DH      DP  +   Q        PF+++    L  ++   T         E
Sbjct: 24  NNNNKNDDHHHQHNNDPIGMAMDQYTQLHIFNPFSSSHFPPLSSSLTTTTLLSGDQEDDE 83

Query: 89  TDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISE 148
            + +    + AM+EM+++IA MQ + IDP  VK PKRRNV+IS DPQSVAARHRRERISE
Sbjct: 84  DEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISE 143

Query: 149 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLP 197
           RIRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L       P P
Sbjct: 144 RIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTPPP 191

[Close]
BLAST of CmaCh09G002350 vs. Swiss-Prot
Match: BH087_ARATH (Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.5e-30
Identity = 70/132 (53.03%), Postives = 95/132 (71.97%), Query Frame = 1 

Query: 96  SVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 155
           ++A M+EMI+R A  +P+    E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 156 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAPASGVGFPLEMSSGS 215
           LVPGGTKMDTASMLDEA +Y+KFL+ QV++LE         + +  ++   FPL     S
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFPL--FHPS 360

Query: 216 YVPMAKPSQMTH 228
           ++P+  P+Q+ H
Sbjct: 361 FLPLQNPNQIHH 370

[Close]
BLAST of CmaCh09G002350 vs. Swiss-Prot
Match: IND_ARATH (Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3)

HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27
Identity = 71/130 (54.62%), Postives = 88/130 (67.69%), Query Frame = 1 

Query: 88  ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERIS 147
           + D +    + AM+EM + IAVMQP+ IDP  V  P RRNV+IS DPQ+V AR RRERIS
Sbjct: 76  DEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERIS 135

Query: 148 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAPASGVGF 207
           E+IRIL+R+VPGG KMDTASMLDEAI Y KFLK QV+ L+             P S +G 
Sbjct: 136 EKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ-------------PHSQIGA 190

Query: 208 PLEMSSGSYV 218
           P  M++ SY+
Sbjct: 196 P--MANPSYL 190

[Close]
BLAST of CmaCh09G002350 vs. TrEMBL
Match: A0A0A0L0B3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639900 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.9e-83
Identity = 188/243 (77.37%), Postives = 196/243 (80.66%), Query Frame = 1 

Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTD-PHCLETLQQAAESSS 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYN  SPPS  FSS+TTD PHC         SSS
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDHPHC-----HLDSSSS 60

Query: 61  PPF---------TNNLPYNLPQ--TVPFP--TSSRWRNSGG-ETD-LQKQRSVAAMREMI 120
           PP          +NN PYN PQ  TVPFP  +SSRWRNSG  ET+ LQKQRSVAAMREMI
Sbjct: 61  PPLFINNNSNNNSNNPPYNFPQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMI 120

Query: 121 FRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180
           FRIAVMQPI IDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD
Sbjct: 121 FRIAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180

Query: 181 TASMLDEAIHYVKFLKTQVQSLERAAT---NRPLPDAAAPASGVGFPLEMSSGSYVPMAK 225
           TASMLDEAIHYVKFLKTQVQSLERAA    NRP+    AP+S VGFPLEMS+GSY+P   
Sbjct: 181 TASMLDEAIHYVKFLKTQVQSLERAAVSAGNRPITGVGAPSS-VGFPLEMSTGSYIPNHH 237

[Close]
BLAST of CmaCh09G002350 vs. TrEMBL
Match: A0A061FIV8_THECC (Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_033818 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.2e-63
Identity = 160/271 (59.04%), Postives = 181/271 (66.79%), Query Frame = 1 

Query: 1   MENDDLKS--EDQMEIMMMMQQMEKIPEFYN------HLSPP--------SDHFSSSTTD 60
           ME D LKS  EDQME+MMMMQ M+K+PEFY        LSP         S + S+ST  
Sbjct: 1   MEIDQLKSATEDQMEMMMMMQ-MDKLPEFYGAYNEVVELSPAELAGASSNSSNNSTSTAT 60

Query: 61  PHCLETLQQAAESSSPPFTNNLPYNL-------------PQTVPFPTSSRWRNSGG---- 120
           PH +E        +SPPF N LP N+             P  +  P S+RWR +G     
Sbjct: 61  PHFVENPHVG---NSPPFMN-LPTNISFTGSTPVQEAGPPGFLSSPGSARWRGAGELSGA 120

Query: 121 ---ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRE 180
               T  QK+ S+AAMREMIFRIA MQPI IDPE+VKPPKRRNVKIS DPQSVAARHRRE
Sbjct: 121 NAFSTLSQKKNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRE 180

Query: 181 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAPASG 236
           RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER A NRP        +G
Sbjct: 181 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERVAANRP--------AG 240

[Close]
BLAST of CmaCh09G002350 vs. TrEMBL
Match: B9GNV1_POPTR (Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0002s12660g PE=4 SV=2)

HSP 1 Score: 238.8 bits (608), Expect = 6.7e-60
Identity = 153/278 (55.04%), Postives = 177/278 (63.67%), Query Frame = 1 

Query: 1   MENDDLKS--EDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSS----------------T 60
           ME D L+S  EDQME+MM+M   +K+PEFY+  +  +DH S +                T
Sbjct: 1   MEIDQLRSATEDQMEMMMLM---DKLPEFYDSYNDVADHLSPTEFLAASASNISISHFNT 60

Query: 61  TDPHCLETLQQAAESSSPPFTN---NLPYNLPQT----------VPFPTSSRWRNSGG-- 120
            +PH          +SSPPF N    L  N   T           P P+SSRWR  G   
Sbjct: 61  DNPH---------NASSPPFMNLQSTLSSNSNSTPTQDQSPQDFFPSPSSSRWRGLGELP 120

Query: 121 -----ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHR 180
                 T  QK+ S+A MREMIFRIA MQPIQIDPE+VKPPKRRNVKIS DPQSVAARHR
Sbjct: 121 EANDYATPSQKKNSMATMREMIFRIAAMQPIQIDPESVKPPKRRNVKISKDPQSVAARHR 180

Query: 181 RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAPA 236
           RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER   NRP        
Sbjct: 181 RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERFQANRP-----TTT 240

[Close]
BLAST of CmaCh09G002350 vs. TrEMBL
Match: A0A067KZW9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16128 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 8.7e-60
Identity = 158/277 (57.04%), Postives = 184/277 (66.43%), Query Frame = 1 

Query: 1   MENDDLK--SEDQMEIMMMMQQMEKIPEFYNHLSPPSD-----HFSSSTTD--------- 60
           ME D LK  +EDQME+MMMM   +K+PEFY   +  +D      F  +TT+         
Sbjct: 1   MEIDQLKCATEDQMEMMMMM---DKLPEFYTPYNDVTDLASPVEFPGATTNTNCINSVNA 60

Query: 61  -PHCLETLQQAAESSSPP---FTNNLPY---NLPQTV------------PFPTS-SRW-- 120
            PH ++   Q A S+SPP     +N+P+   N   T+            P PT+ SR   
Sbjct: 61  IPHFIDN-PQIANSNSPPFVTLPSNMPFASNNNSTTIHEESSQPHFLSNPLPTARSRGVG 120

Query: 121 ----RNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVA 180
                NS   T  QK+ S+AAMREMIFRIA MQPI IDPE+VKPPKRRNVKIS DPQSVA
Sbjct: 121 EFPAANSSYSTQSQKKNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVA 180

Query: 181 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDA 236
           ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA  NRP    
Sbjct: 181 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAQANRP---- 240

[Close]
BLAST of CmaCh09G002350 vs. TrEMBL
Match: E0CPU4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g10400 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 7.4e-59
Identity = 151/258 (58.53%), Postives = 175/258 (67.83%), Query Frame = 1 

Query: 1   MENDDLKS--EDQMEIMMMMQQMEKIPEF---YNHLSP-PSDHFSS--STTDPHCLETLQ 60
           M+ D LKS  EDQME+MMM  QM+K+PEF   YN ++  PS  FS   S T P   +   
Sbjct: 1   MDIDLLKSAPEDQMEMMMM--QMDKLPEFCGTYNEMAELPSMGFSGGGSATMPQIFDNPH 60

Query: 61  QAAES-----SSPPFTNNLPYNLPQTVPFPTSS---RWRNSGG-------ETDLQKQRSV 120
            A+ +     S+  F    P   P    F T+S   RWR +G         T  QK+ S+
Sbjct: 61  VASPTFINSPSTISFNGTTPPQEPTAPAFLTNSAVARWRGTGELSGVCNLSTPAQKRNSM 120

Query: 121 AAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLV 180
           AAMREMIFRIA MQP+ IDPE+VKPPKRRNVKIS DPQSVAARHRRERISE+IRILQRLV
Sbjct: 121 AAMREMIFRIAAMQPVHIDPESVKPPKRRNVKISKDPQSVAARHRRERISEKIRILQRLV 180

Query: 181 PGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAPASGVGFPLEMSSGSYV 236
           PGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA NRP        +G+GFP+ MS+GSY+
Sbjct: 181 PGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP--------AGIGFPVTMSNGSYL 240

[Close]
BLAST of CmaCh09G002350 vs. TAIR10
Match: AT3G50330.1 (AT3G50330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-47
Identity = 117/199 (58.79%), Postives = 136/199 (68.34%), Query Frame = 1 

Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSP-PSDH----FSSSTTDPHCLETLQQAA 60
           M+N D+         MMMQQMEK+PE +++ +P P+ H     S S T P          
Sbjct: 1   MDNSDILMN------MMMQQMEKLPEHFSNSNPNPNPHNIMMLSESNTHPFFFNPTH--- 60

Query: 61  ESSSPPFTNNLPYNLP----QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQ 120
             S  PF   +P++ P    +  P P+SS     GG +D     ++AAMREMIFRIAVMQ
Sbjct: 61  --SHLPFDQTMPHHQPGLNFRYAPSPSSSLPEKRGGCSD---NANMAAMREMIFRIAVMQ 120

Query: 121 PIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 180
           PI IDPE+VKPPKR+NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE
Sbjct: 121 PIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 180

Query: 181 AIHYVKFLKTQVQSLERAA 191
           AIHYVKFLK QVQSLE  A
Sbjct: 181 AIHYVKFLKKQVQSLEEHA 185

[Close]
BLAST of CmaCh09G002350 vs. TAIR10
Match: AT5G67060.1 (AT5G67060.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 172.9 bits (437), Expect = 2.3e-43
Identity = 112/186 (60.22%), Postives = 122/186 (65.59%), Query Frame = 1 

Query: 16  MMMQQMEKIPEFYNHLSPPSDHFSS--STTDPHCLETLQQAAESS---SPPFT------N 75
           MMM QMEK+PEF N   P S  FS   + T P    +    ++ S    P F        
Sbjct: 8   MMMHQMEKLPEFCN---PNSSFFSPDHNNTYPFLFNSTHYQSDHSMTNEPGFRYGSGLLT 67

Query: 76  NLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPK 135
           N     P T         RN+    +     ++AAMREMIFRIAVMQPI IDPEAVKPPK
Sbjct: 68  NPSSISPNTAYSSVFLDKRNNSNNNN--NGTNMAAMREMIFRIAVMQPIHIDPEAVKPPK 127

Query: 136 RRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 191
           RRNV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQ
Sbjct: 128 RRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQ 187

[Close]
BLAST of CmaCh09G002350 vs. TAIR10
Match: AT5G09750.1 (AT5G09750.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-33
Identity = 83/168 (49.40%), Postives = 102/168 (60.71%), Query Frame = 1 

Query: 29  NHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGE 88
           N+ +   DH      DP  +   Q        PF+++    L  ++   T         E
Sbjct: 24  NNNNKNDDHHHQHNNDPIGMAMDQYTQLHIFNPFSSSHFPPLSSSLTTTTLLSGDQEDDE 83

Query: 89  TDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISE 148
            + +    + AM+EM+++IA MQ + IDP  VK PKRRNV+IS DPQSVAARHRRERISE
Sbjct: 84  DEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISE 143

Query: 149 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLP 197
           RIRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L       P P
Sbjct: 144 RIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTPPP 191

[Close]
BLAST of CmaCh09G002350 vs. TAIR10
Match: AT3G21330.1 (AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-31
Identity = 70/132 (53.03%), Postives = 95/132 (71.97%), Query Frame = 1 

Query: 96  SVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 155
           ++A M+EMI+R A  +P+    E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 156 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAPASGVGFPLEMSSGS 215
           LVPGGTKMDTASMLDEA +Y+KFL+ QV++LE         + +  ++   FPL     S
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFPL--FHPS 360

Query: 216 YVPMAKPSQMTH 228
           ++P+  P+Q+ H
Sbjct: 361 FLPLQNPNQIHH 370

[Close]
BLAST of CmaCh09G002350 vs. TAIR10
Match: AT4G00120.1 (AT4G00120.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 9.3e-29
Identity = 71/130 (54.62%), Postives = 88/130 (67.69%), Query Frame = 1 

Query: 88  ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERIS 147
           + D +    + AM+EM + IAVMQP+ IDP  V  P RRNV+IS DPQ+V AR RRERIS
Sbjct: 76  DEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERIS 135

Query: 148 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAPASGVGF 207
           E+IRIL+R+VPGG KMDTASMLDEAI Y KFLK QV+ L+             P S +G 
Sbjct: 136 EKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ-------------PHSQIGA 190

Query: 208 PLEMSSGSYV 218
           P  M++ SY+
Sbjct: 196 P--MANPSYL 190

[Close]
BLAST of CmaCh09G002350 vs. NCBI nr
Match: gi|449447251|ref|XP_004141382.1| (PREDICTED: transcription factor HEC2-like [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 2.8e-83
Identity = 188/243 (77.37%), Postives = 196/243 (80.66%), Query Frame = 1 

Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTD-PHCLETLQQAAESSS 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYN  SPPS  FSS+TTD PHC         SSS
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDHPHC-----HLDSSSS 60

Query: 61  PPF---------TNNLPYNLPQ--TVPFP--TSSRWRNSGG-ETD-LQKQRSVAAMREMI 120
           PP          +NN PYN PQ  TVPFP  +SSRWRNSG  ET+ LQKQRSVAAMREMI
Sbjct: 61  PPLFINNNSNNNSNNPPYNFPQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMI 120

Query: 121 FRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180
           FRIAVMQPI IDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD
Sbjct: 121 FRIAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180

Query: 181 TASMLDEAIHYVKFLKTQVQSLERAAT---NRPLPDAAAPASGVGFPLEMSSGSYVPMAK 225
           TASMLDEAIHYVKFLKTQVQSLERAA    NRP+    AP+S VGFPLEMS+GSY+P   
Sbjct: 181 TASMLDEAIHYVKFLKTQVQSLERAAVSAGNRPITGVGAPSS-VGFPLEMSTGSYIPNHH 237

[Close]
BLAST of CmaCh09G002350 vs. NCBI nr
Match: gi|659103298|ref|XP_008452566.1| (PREDICTED: transcription factor HEC2-like [Cucumis melo])

HSP 1 Score: 313.5 bits (802), Expect = 3.1e-82
Identity = 185/235 (78.72%), Postives = 191/235 (81.28%), Query Frame = 1 

Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTD-PHCLETLQQAAESSS 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYN  SPPS  FSS+TTD PHC         SSS
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDNPHC-----HLDSSSS 60

Query: 61  PPF-------TNNLPYNLPQ--TVPFP--TSSRWRNSGG-ETD-LQKQRSVAAMREMIFR 120
           PP         NN PYN PQ  TVPFP  + SRWRNSG  ET+ LQKQRSVAAMREMIFR
Sbjct: 61  PPLFINNNNSNNNPPYNFPQQSTVPFPGTSPSRWRNSGSCETESLQKQRSVAAMREMIFR 120

Query: 121 IAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 180
           IAVMQPI IDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA
Sbjct: 121 IAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 180

Query: 181 SMLDEAIHYVKFLKTQVQSLERAAT---NRPLPDAAAPASGVGFPLEMSSGSYVP 219
           SMLDEAIHYVKFLKTQVQSLERAA    NRP+    AP+  VGFPLEMSSGSY+P
Sbjct: 181 SMLDEAIHYVKFLKTQVQSLERAAVSTGNRPITGGGAPS--VGFPLEMSSGSYIP 228

[Close]
BLAST of CmaCh09G002350 vs. NCBI nr
Match: gi|590592169|ref|XP_007017204.1| (Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao])

HSP 1 Score: 250.4 bits (638), Expect = 3.2e-63
Identity = 160/271 (59.04%), Postives = 181/271 (66.79%), Query Frame = 1 

Query: 1   MENDDLKS--EDQMEIMMMMQQMEKIPEFYN------HLSPP--------SDHFSSSTTD 60
           ME D LKS  EDQME+MMMMQ M+K+PEFY        LSP         S + S+ST  
Sbjct: 1   MEIDQLKSATEDQMEMMMMMQ-MDKLPEFYGAYNEVVELSPAELAGASSNSSNNSTSTAT 60

Query: 61  PHCLETLQQAAESSSPPFTNNLPYNL-------------PQTVPFPTSSRWRNSGG---- 120
           PH +E        +SPPF N LP N+             P  +  P S+RWR +G     
Sbjct: 61  PHFVENPHVG---NSPPFMN-LPTNISFTGSTPVQEAGPPGFLSSPGSARWRGAGELSGA 120

Query: 121 ---ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRE 180
               T  QK+ S+AAMREMIFRIA MQPI IDPE+VKPPKRRNVKIS DPQSVAARHRRE
Sbjct: 121 NAFSTLSQKKNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRE 180

Query: 181 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAPASG 236
           RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER A NRP        +G
Sbjct: 181 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERVAANRP--------AG 240

[Close]
BLAST of CmaCh09G002350 vs. NCBI nr
Match: gi|566157687|ref|XP_002301178.2| (basic helix-loop-helix family protein [Populus trichocarpa])

HSP 1 Score: 238.8 bits (608), Expect = 9.6e-60
Identity = 153/278 (55.04%), Postives = 177/278 (63.67%), Query Frame = 1 

Query: 1   MENDDLKS--EDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSS----------------T 60
           ME D L+S  EDQME+MM+M   +K+PEFY+  +  +DH S +                T
Sbjct: 1   MEIDQLRSATEDQMEMMMLM---DKLPEFYDSYNDVADHLSPTEFLAASASNISISHFNT 60

Query: 61  TDPHCLETLQQAAESSSPPFTN---NLPYNLPQT----------VPFPTSSRWRNSGG-- 120
            +PH          +SSPPF N    L  N   T           P P+SSRWR  G   
Sbjct: 61  DNPH---------NASSPPFMNLQSTLSSNSNSTPTQDQSPQDFFPSPSSSRWRGLGELP 120

Query: 121 -----ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHR 180
                 T  QK+ S+A MREMIFRIA MQPIQIDPE+VKPPKRRNVKIS DPQSVAARHR
Sbjct: 121 EANDYATPSQKKNSMATMREMIFRIAAMQPIQIDPESVKPPKRRNVKISKDPQSVAARHR 180

Query: 181 RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAPA 236
           RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER   NRP        
Sbjct: 181 RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERFQANRP-----TTT 240

[Close]
BLAST of CmaCh09G002350 vs. NCBI nr
Match: gi|802572356|ref|XP_012068336.1| (PREDICTED: transcription factor HEC2-like [Jatropha curcas])

HSP 1 Score: 238.4 bits (607), Expect = 1.2e-59
Identity = 158/277 (57.04%), Postives = 184/277 (66.43%), Query Frame = 1 

Query: 1   MENDDLK--SEDQMEIMMMMQQMEKIPEFYNHLSPPSD-----HFSSSTTD--------- 60
           ME D LK  +EDQME+MMMM   +K+PEFY   +  +D      F  +TT+         
Sbjct: 1   MEIDQLKCATEDQMEMMMMM---DKLPEFYTPYNDVTDLASPVEFPGATTNTNCINSVNA 60

Query: 61  -PHCLETLQQAAESSSPP---FTNNLPY---NLPQTV------------PFPTS-SRW-- 120
            PH ++   Q A S+SPP     +N+P+   N   T+            P PT+ SR   
Sbjct: 61  IPHFIDN-PQIANSNSPPFVTLPSNMPFASNNNSTTIHEESSQPHFLSNPLPTARSRGVG 120

Query: 121 ----RNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVA 180
                NS   T  QK+ S+AAMREMIFRIA MQPI IDPE+VKPPKRRNVKIS DPQSVA
Sbjct: 121 EFPAANSSYSTQSQKKNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVA 180

Query: 181 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDA 236
           ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA  NRP    
Sbjct: 181 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAQANRP---- 240

The following BLAST results are available for this feature:
BLAST of CmaCh09G002350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HEC2_ARATH2.1e-4658.79Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1[more]
HEC1_ARATH4.0e-4260.22Transcription factor HEC1 OS=Arabidopsis thaliana GN=HEC1 PE=1 SV=1[more]
HEC3_ARATH3.8e-3249.40Transcription factor HEC3 OS=Arabidopsis thaliana GN=HEC3 PE=1 SV=1[more]
BH087_ARATH3.5e-3053.03Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2 SV=1[more]
IND_ARATH1.6e-2754.62Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3[more]
BLAST of CmaCh09G002350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0B3_CUCSA1.9e-8377.37Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639900 PE=4 SV=1[more]
A0A061FIV8_THECC2.2e-6359.04Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM... [more]
B9GNV1_POPTR6.7e-6055.04Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0002s12660... [more]
A0A067KZW9_JATCU8.7e-6057.04Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16128 PE=4 SV=1[more]
E0CPU4_VITVI7.4e-5958.53Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g10400 PE=4 SV=... [more]
BLAST of CmaCh09G002350 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G50330.11.2e-4758.79 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G67060.12.3e-4360.22 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G09750.12.1e-3349.40 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G21330.12.0e-3153.03 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G00120.19.3e-2954.62 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of CmaCh09G002350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447251|ref|XP_004141382.1|2.8e-8377.37PREDICTED: transcription factor HEC2-like [Cucumis sativus][more]
gi|659103298|ref|XP_008452566.1|3.1e-8278.72PREDICTED: transcription factor HEC2-like [Cucumis melo][more]
gi|590592169|ref|XP_007017204.1|3.2e-6359.04Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao][more]
gi|566157687|ref|XP_002301178.2|9.6e-6055.04basic helix-loop-helix family protein [Populus trichocarpa][more]
gi|802572356|ref|XP_012068336.1|1.2e-5957.04PREDICTED: transcription factor HEC2-like [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G002350.1CmaCh09G002350.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 135..189
score: 5.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 140..179
score: 6.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 136..185
score: 1.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 130..179
score: 15
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 135..188
score: 4.32
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 1..221
score: 9.5
NoneNo IPR availablePANTHERPTHR12565:SF118SUBFAMILY NOT NAMEDcoord: 1..221
score: 9.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh09G002350Cucsa.352300Cucumber (Gy14) v1cgycmaB0960
CmaCh09G002350Cucsa.396050Cucumber (Gy14) v1cgycmaB1086
CmaCh09G002350Cla020660Watermelon (97103) v1cmawmB026
CmaCh09G002350Cla022582Watermelon (97103) v1cmawmB014
CmaCh09G002350Csa2G357190Cucumber (Chinese Long) v2cmacuB011
CmaCh09G002350Csa4G639900Cucumber (Chinese Long) v2cmacuB020
CmaCh09G002350MELO3C010848Melon (DHL92) v3.5.1cmameB023
CmaCh09G002350MELO3C016763Melon (DHL92) v3.5.1cmameB040
CmaCh09G002350ClCG05G019980Watermelon (Charleston Gray)cmawcgB021
CmaCh09G002350ClCG08G016020Watermelon (Charleston Gray)cmawcgB029
CmaCh09G002350CSPI02G19010Wild cucumber (PI 183967)cmacpiB011
CmaCh09G002350CSPI04G24200Wild cucumber (PI 183967)cmacpiB020
CmaCh09G002350CmoCh09G002290Cucurbita moschata (Rifu)cmacmoB027
CmaCh09G002350CmoCh05G001760Cucurbita moschata (Rifu)cmacmoB062
CmaCh09G002350Lsi08G014800Bottle gourd (USVL1VR-Ls)cmalsiB032
CmaCh09G002350Lsi04G015500Bottle gourd (USVL1VR-Ls)cmalsiB024
CmaCh09G002350Cp4.1LG11g01470Cucurbita pepo (Zucchini)cmacpeB030
CmaCh09G002350Cp4.1LG06g01720Cucurbita pepo (Zucchini)cmacpeB060
CmaCh09G002350MELO3C010848.2Melon (DHL92) v3.6.1cmamedB024
CmaCh09G002350MELO3C016763.2Melon (DHL92) v3.6.1cmamedB039
CmaCh09G002350CsaV3_4G034440Cucumber (Chinese Long) v3cmacucB0027
CmaCh09G002350CsaV3_2G026610Cucumber (Chinese Long) v3cmacucB0015
CmaCh09G002350Cla97C05G101640Watermelon (97103) v2cmawmbB026
CmaCh09G002350Cla97C08G159640Watermelon (97103) v2cmawmbB035
CmaCh09G002350Bhi09G002720Wax gourdcmawgoB0035
CmaCh09G002350Bhi04G000332Wax gourdcmawgoB0014
CmaCh09G002350CsGy4G022460Cucumber (Gy14) v2cgybcmaB465
CmaCh09G002350CsGy2G018890Cucumber (Gy14) v2cgybcmaB147
CmaCh09G002350Carg11853Silver-seed gourdcarcmaB0247
CmaCh09G002350Carg26318Silver-seed gourdcarcmaB1097
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh09G002350CmaCh05G001790Cucurbita maxima (Rimu)cmacmaB067
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G002350Watermelon (97103) v2cmawmbB013
CmaCh09G002350Cucurbita maxima (Rimu)cmacmaB033
CmaCh09G002350Cucurbita maxima (Rimu)cmacmaB042
CmaCh09G002350Cucurbita maxima (Rimu)cmacmaB051
CmaCh09G002350Cucurbita maxima (Rimu)cmacmaB063
CmaCh09G002350Cucurbita maxima (Rimu)cmacmaB071
CmaCh09G002350Cucumber (Gy14) v1cgycmaB0219
CmaCh09G002350Cucumber (Gy14) v1cgycmaB0961
CmaCh09G002350Cucurbita moschata (Rifu)cmacmoB038
CmaCh09G002350Cucurbita moschata (Rifu)cmacmoB047
CmaCh09G002350Cucurbita moschata (Rifu)cmacmoB058
CmaCh09G002350Cucurbita moschata (Rifu)cmacmoB065
CmaCh09G002350Wild cucumber (PI 183967)cmacpiB028
CmaCh09G002350Wild cucumber (PI 183967)cmacpiB032
CmaCh09G002350Cucumber (Chinese Long) v2cmacuB028
CmaCh09G002350Cucumber (Chinese Long) v2cmacuB033
CmaCh09G002350Melon (DHL92) v3.5.1cmameB039
CmaCh09G002350Melon (DHL92) v3.5.1cmameB047
CmaCh09G002350Watermelon (97103) v1cmawmB033
CmaCh09G002350Cucurbita pepo (Zucchini)cmacpeB027
CmaCh09G002350Cucurbita pepo (Zucchini)cmacpeB035
CmaCh09G002350Cucurbita pepo (Zucchini)cmacpeB042
CmaCh09G002350Cucurbita pepo (Zucchini)cmacpeB045
CmaCh09G002350Bottle gourd (USVL1VR-Ls)cmalsiB015
CmaCh09G002350Cucumber (Gy14) v2cgybcmaB699
CmaCh09G002350Melon (DHL92) v3.6.1cmamedB038
CmaCh09G002350Melon (DHL92) v3.6.1cmamedB045
CmaCh09G002350Silver-seed gourdcarcmaB1065
CmaCh09G002350Cucumber (Chinese Long) v3cmacucB0035
CmaCh09G002350Cucumber (Chinese Long) v3cmacucB0039