Carg26318 (gene) Silver-seed gourd

Overview
NameCarg26318
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTranscription factor, putative
LocationCucurbita_argyrosperma_scaffold_399 : 98226 .. 98939 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATGATGATCTGAAATCGGAGGATCAGATGGAGATTATGATGATGATGCAACAAATGGAGAAAATCCCTGAATTTTACAATCATCTCTCACCGCCCTCCGATCATTTCAGCTCAAGCACCACCGACCCACATTGCCTGGAAACCCTTCAACAAGCCGCGGAGTCCTCGTCGCCTCCATTCACCAACAACCTACCTTATAATTTGCCTCAAACTGTTCCATTCCCCACCAGTTCACGGTGGCGAAACTCTGGCGGTGAAACGGACTTGCAGAAACAGAGGTCGGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATCCAAATAGACCCAGAAGCGGTGAAGCCACCAAAGAGGAGGAACGTCAAGATTTCAACCGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGAGAATTAGCGAGAGAATTAGGATACTCCAAAGATTGGTCCCTGGAGGTACCAAAATGGATACCGCTTCTATGTTGGATGAGGCTATACATTACGTTAAATTCTTGAAGACCCAAGTGCAATCCCTCGAAAGAGCCGCCACCAACAGGCCACTCCCTGATGCTGCTGCAGCAGCAGCAGCATCTGGCGTAGGGTTTCCTCTGGAAATGTCAAGTGGCAGCTATGTCCCCATGGCCAAACCATCCCAAATCACTCACAACCTTGAGCAGTACGGAGATGCTTAA

mRNA sequence

ATGGAAAATGATGATCTGAAATCGGAGGATCAGATGGAGATTATGATGATGATGCAACAAATGGAGAAAATCCCTGAATTTTACAATCATCTCTCACCGCCCTCCGATCATTTCAGCTCAAGCACCACCGACCCACATTGCCTGGAAACCCTTCAACAAGCCGCGGAGTCCTCGTCGCCTCCATTCACCAACAACCTACCTTATAATTTGCCTCAAACTGTTCCATTCCCCACCAGTTCACGGTGGCGAAACTCTGGCGGTGAAACGGACTTGCAGAAACAGAGGTCGGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATCCAAATAGACCCAGAAGCGGTGAAGCCACCAAAGAGGAGGAACGTCAAGATTTCAACCGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGAGAATTAGCGAGAGAATTAGGATACTCCAAAGATTGGTCCCTGGAGGTACCAAAATGGATACCGCTTCTATGTTGGATGAGGCTATACATTACGTTAAATTCTTGAAGACCCAAGTGCAATCCCTCGAAAGAGCCGCCACCAACAGGCCACTCCCTGATGCTGCTGCAGCAGCAGCAGCATCTGGCGTAGGGTTTCCTCTGGAAATGTCAAGTGGCAGCTATGTCCCCATGGCCAAACCATCCCAAATCACTCACAACCTTGAGCAGTACGGAGATGCTTAA

Coding sequence (CDS)

ATGGAAAATGATGATCTGAAATCGGAGGATCAGATGGAGATTATGATGATGATGCAACAAATGGAGAAAATCCCTGAATTTTACAATCATCTCTCACCGCCCTCCGATCATTTCAGCTCAAGCACCACCGACCCACATTGCCTGGAAACCCTTCAACAAGCCGCGGAGTCCTCGTCGCCTCCATTCACCAACAACCTACCTTATAATTTGCCTCAAACTGTTCCATTCCCCACCAGTTCACGGTGGCGAAACTCTGGCGGTGAAACGGACTTGCAGAAACAGAGGTCGGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATCCAAATAGACCCAGAAGCGGTGAAGCCACCAAAGAGGAGGAACGTCAAGATTTCAACCGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGAGAATTAGCGAGAGAATTAGGATACTCCAAAGATTGGTCCCTGGAGGTACCAAAATGGATACCGCTTCTATGTTGGATGAGGCTATACATTACGTTAAATTCTTGAAGACCCAAGTGCAATCCCTCGAAAGAGCCGCCACCAACAGGCCACTCCCTGATGCTGCTGCAGCAGCAGCAGCATCTGGCGTAGGGTTTCCTCTGGAAATGTCAAGTGGCAGCTATGTCCCCATGGCCAAACCATCCCAAATCACTCACAACCTTGAGCAGTACGGAGATGCTTAA

Protein sequence

MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAASGVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA
Homology
[Close]
BLAST of Carg26318 vs. NCBI nr
Match: XP_023536625.1 (transcription factor HEC2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 452.6 bits (1163), Expect = 8.3e-124
Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 0 

Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60

Query: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120
           PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV
Sbjct: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120

Query: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180
           KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK
Sbjct: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180

Query: 181 TQVQSLERAATNRPLPDAAAAAAASGVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA 238
           TQVQSLERAATNRPLPD AAAAAASGVGFPLEMSSGSYVPMAKPSQ+THNLEQYGDA
Sbjct: 181 TQVQSLERAATNRPLPD-AAAAAASGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 236

[Close]
BLAST of Carg26318 vs. NCBI nr
Match: XP_022975973.1 (transcription factor HEC2-like [Cucurbita maxima])

HSP 1 Score: 448.7 bits (1153), Expect = 1.2e-122
Identity = 233/237 (98.31%), Postives = 234/237 (98.73%), Query Frame = 0 

Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60

Query: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120
           PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV
Sbjct: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120

Query: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180
           KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK
Sbjct: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180

Query: 181 TQVQSLERAATNRPLPDAAAAAAASGVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA 238
           TQVQSLERAATNRPLPD  AAA ASGVGFPLEMSSGSYVPMAKPSQ+THNLEQYGDA
Sbjct: 181 TQVQSLERAATNRPLPD--AAAPASGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 235

[Close]
BLAST of Carg26318 vs. NCBI nr
Match: XP_022936595.1 (transcription factor HEC2-like [Cucurbita moschata])

HSP 1 Score: 434.9 bits (1117), Expect = 1.8e-118
Identity = 227/240 (94.58%), Postives = 228/240 (95.00%), Query Frame = 0 

Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60

Query: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120
           PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV
Sbjct: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120

Query: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180
           KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK
Sbjct: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180

Query: 181 TQVQSLERAATNRPLPDA---AAAAAASGVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA 238
           TQVQSLERAATNRPLPDA            GFPLEMSSGSYVPMAKPSQ+THNLEQYGDA
Sbjct: 181 TQVQSLERAATNRPLPDAXXXXXXXXXXXXGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 240

[Close]
BLAST of Carg26318 vs. NCBI nr
Match: XP_004141382.1 (PREDICTED: transcription factor HEC2-like [Cucumis sativus] >KGN55203.1 hypothetical protein Csa_4G639900 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 9.0e-62
Identity = 158/240 (65.83%), Postives = 163/240 (67.92%), Query Frame = 0 

Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYN-----HLSPPSDHFSSSTTDPHCLETLQQAA 60
           MENDDLKSEDQMEIM        IPEFYN                               
Sbjct: 1   MENDDLKSEDQMEIMXXXXXXXXIPEFYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  ESSSPPFTNNLPYNLPQ--TVPFP--TSSRWRNSGG-ETD-LQKQRSVAAMREMIFRIAV 120
                       YN PQ  TVPFP  +SSRWRNSG  ET+ LQKQRSVAAMREMIFRIAV
Sbjct: 61  XXXXXXXXXXXXYNFPQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMIFRIAV 120

Query: 121 MQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASML 180
           MQPI IDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASML
Sbjct: 121 MQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASML 180

Query: 181 DEAIHYVKFLKTQVQSLERAAT---NRPLPDAAAAAAASGVGFPLEMSSGSYVPMAKPSQ 227
           DEAIHYVKFLKTQVQSLERAA    NRP+       A S VGFPLEMS+GSY+P    SQ
Sbjct: 181 DEAIHYVKFLKTQVQSLERAAVSAGNRPI---TGVGAPSSVGFPLEMSTGSYIPNHHQSQ 237

[Close]
BLAST of Carg26318 vs. NCBI nr
Match: XP_012068336.1 (transcription factor HEC2 [Jatropha curcas] >KDP41721.1 hypothetical protein JCGZ_16128 [Jatropha curcas])

HSP 1 Score: 245.0 bits (624), Expect = 2.6e-61
Identity = 158/279 (56.63%), Postives = 185/279 (66.31%), Query Frame = 0 

Query: 1   MENDDLK--SEDQMEIMMMMQQMEKIPEFYNHLSPPSD-----HFSSSTTDPHCLETLQ- 60
           ME D LK  +EDQME+MMM   M+K+PEFY   +  +D      F  +TT+ +C+ ++  
Sbjct: 1   MEIDQLKCATEDQMEMMMM---MDKLPEFYTPYNDVTDLASPVEFPGATTNTNCINSVNA 60

Query: 61  --------QAAESSSPPFTNNLPYNLP-------------------QTVPFPTS-SRW-- 120
                   Q A S+SPPF   LP N+P                    + P PT+ SR   
Sbjct: 61  IPHFIDNPQIANSNSPPFV-TLPSNMPFASNNNSTTIHEESSQPHFLSNPLPTARSRGVG 120

Query: 121 ----RNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVA 180
                NS   T  QK+ S+AAMREMIFRIA MQPI IDPE+VKPPKRRNVKIS DPQSVA
Sbjct: 121 EFPAANSSYSTQSQKKNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVA 180

Query: 181 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDA 238
           ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA  NRP    
Sbjct: 181 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAQANRP---- 240

[Close]
BLAST of Carg26318 vs. TAIR10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 180.3 bits (456), Expect = 1.4e-45
Identity = 114/199 (57.29%), Postives = 132/199 (66.33%), Query Frame = 0 

Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDH-----FSSSTTDPHCLETLQQAA 60
           M+N D+       + MMMQQMEK+PE +++             S S T P          
Sbjct: 1   MDNSDIL------MNMMMQQMEKLPEHFSNXXXXXXXXXIMMLSESNTHPFFFNPTH--- 60

Query: 61  ESSSPPFTNNLPYNLP----QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQ 120
             S  PF   +P++ P    +  P P+SS     GG +D     ++AAMREMIFRIAVMQ
Sbjct: 61  --SHLPFDQTMPHHQPGLNFRYAPSPSSSLPEKRGGCSD---NANMAAMREMIFRIAVMQ 120

Query: 121 PIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 180
           PI IDPE+VKPPKR+NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE
Sbjct: 121 PIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 180

Query: 181 AIHYVKFLKTQVQSLERAA 191
           AIHYVKFLK QVQSLE  A
Sbjct: 181 AIHYVKFLKKQVQSLEEHA 185

[Close]
BLAST of Carg26318 vs. TAIR10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-42
Identity = 110/184 (59.78%), Postives = 121/184 (65.76%), Query Frame = 0 

Query: 16  MMMQQMEKIPEFYNHLSPPSDHFS--SSTTDPHCLETLQQAAESSSPPFTNNLPYNLPQT 75
           MMM QMEK+PEF N   P S  FS   + T P    +    ++ S    TN   +     
Sbjct: 8   MMMHQMEKLPEFCN---PNSSFFSPDHNNTYPFLFNSTHYQSDHS---MTNEPGFRYGSG 67

Query: 76  VPFPTSSRWRNSGGETDLQKQR----------SVAAMREMIFRIAVMQPIQIDPEAVKPP 135
           +    SS   N+   +    +R            AAMREMIFRIAVMQPI IDPEAVKPP
Sbjct: 68  LLTNPSSISPNTAYSSVFLDKRXXXXXXXXXXXXAAMREMIFRIAVMQPIHIDPEAVKPP 127

Query: 136 KRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 188
           KRRNV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QV
Sbjct: 128 KRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 185

[Close]
BLAST of Carg26318 vs. TAIR10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 137.9 bits (346), Expect = 8.2e-33
Identity = 70/90 (77.78%), Postives = 79/90 (87.78%), Query Frame = 0 

Query: 97  VAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRL 156
           + AM+EM+++IA MQ + IDP  VK PKRRNV+IS DPQSVAARHRRERISERIRILQRL
Sbjct: 92  LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151

Query: 157 VPGGTKMDTASMLDEAIHYVKFLKTQVQSL 187
           VPGGTKMDTASMLDEAI YVKFLK Q++ L
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLL 181

[Close]
BLAST of Carg26318 vs. TAIR10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 131.3 bits (329), Expect = 7.6e-31
Identity = 75/135 (55.56%), Postives = 97/135 (71.85%), Query Frame = 0 

Query: 96  SVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 155
           ++A M+EMI+R A  +P+    E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 156 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAASG-VGFPLEMS 215
           LVPGGTKMDTASMLDEA +Y+KFL+ QV++LE     RP  D    + +S    FPL   
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENL---RPKLDQTNLSFSSAPTSFPL--F 360

Query: 216 SGSYVPMAKPSQITH 230
             S++P+  P+QI H
Sbjct: 361 HPSFLPLQNPNQIHH 370

[Close]
BLAST of Carg26318 vs. TAIR10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 124.8 bits (312), Expect = 7.2e-29
Identity = 64/100 (64.00%), Postives = 77/100 (77.00%), Query Frame = 0 

Query: 88  ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERIS 147
           + D +    + AM+EM + IAVMQP+ IDP  V  P RRNV+IS DPQ+V AR RRERIS
Sbjct: 76  DEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERIS 135

Query: 148 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 188
           E+IRIL+R+VPGG KMDTASMLDEAI Y KFLK QV+ L+
Sbjct: 136 EKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]
BLAST of Carg26318 vs. Swiss-Prot
Match: sp|Q9SND4|HEC2_ARATH (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.6e-44
Identity = 114/199 (57.29%), Postives = 132/199 (66.33%), Query Frame = 0 

Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDH-----FSSSTTDPHCLETLQQAA 60
           M+N D+       + MMMQQMEK+PE +++             S S T P          
Sbjct: 1   MDNSDIL------MNMMMQQMEKLPEHFSNXXXXXXXXXIMMLSESNTHPFFFNPTH--- 60

Query: 61  ESSSPPFTNNLPYNLP----QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQ 120
             S  PF   +P++ P    +  P P+SS     GG +D     ++AAMREMIFRIAVMQ
Sbjct: 61  --SHLPFDQTMPHHQPGLNFRYAPSPSSSLPEKRGGCSD---NANMAAMREMIFRIAVMQ 120

Query: 121 PIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 180
           PI IDPE+VKPPKR+NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE
Sbjct: 121 PIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 180

Query: 181 AIHYVKFLKTQVQSLERAA 191
           AIHYVKFLK QVQSLE  A
Sbjct: 181 AIHYVKFLKKQVQSLEEHA 185

[Close]
BLAST of Carg26318 vs. Swiss-Prot
Match: sp|Q9FHA7|HEC1_ARATH (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.1e-41
Identity = 110/184 (59.78%), Postives = 121/184 (65.76%), Query Frame = 0 

Query: 16  MMMQQMEKIPEFYNHLSPPSDHFS--SSTTDPHCLETLQQAAESSSPPFTNNLPYNLPQT 75
           MMM QMEK+PEF N   P S  FS   + T P    +    ++ S    TN   +     
Sbjct: 8   MMMHQMEKLPEFCN---PNSSFFSPDHNNTYPFLFNSTHYQSDHS---MTNEPGFRYGSG 67

Query: 76  VPFPTSSRWRNSGGETDLQKQR----------SVAAMREMIFRIAVMQPIQIDPEAVKPP 135
           +    SS   N+   +    +R            AAMREMIFRIAVMQPI IDPEAVKPP
Sbjct: 68  LLTNPSSISPNTAYSSVFLDKRXXXXXXXXXXXXAAMREMIFRIAVMQPIHIDPEAVKPP 127

Query: 136 KRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 188
           KRRNV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QV
Sbjct: 128 KRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 185

[Close]
BLAST of Carg26318 vs. Swiss-Prot
Match: sp|Q9LXD8|HEC3_ARATH (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-31
Identity = 70/90 (77.78%), Postives = 79/90 (87.78%), Query Frame = 0 

Query: 97  VAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRL 156
           + AM+EM+++IA MQ + IDP  VK PKRRNV+IS DPQSVAARHRRERISERIRILQRL
Sbjct: 92  LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151

Query: 157 VPGGTKMDTASMLDEAIHYVKFLKTQVQSL 187
           VPGGTKMDTASMLDEAI YVKFLK Q++ L
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLL 181

[Close]
BLAST of Carg26318 vs. Swiss-Prot
Match: sp|Q8S3D2|BH087_ARATH (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-29
Identity = 75/135 (55.56%), Postives = 97/135 (71.85%), Query Frame = 0 

Query: 96  SVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 155
           ++A M+EMI+R A  +P+    E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 156 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAASG-VGFPLEMS 215
           LVPGGTKMDTASMLDEA +Y+KFL+ QV++LE     RP  D    + +S    FPL   
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENL---RPKLDQTNLSFSSAPTSFPL--F 360

Query: 216 SGSYVPMAKPSQITH 230
             S++P+  P+QI H
Sbjct: 361 HPSFLPLQNPNQIHH 370

[Close]
BLAST of Carg26318 vs. Swiss-Prot
Match: sp|O81313|IND_ARATH (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 64/100 (64.00%), Postives = 77/100 (77.00%), Query Frame = 0 

Query: 88  ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERIS 147
           + D +    + AM+EM + IAVMQP+ IDP  V  P RRNV+IS DPQ+V AR RRERIS
Sbjct: 76  DEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERIS 135

Query: 148 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 188
           E+IRIL+R+VPGG KMDTASMLDEAI Y KFLK QV+ L+
Sbjct: 136 EKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]
BLAST of Carg26318 vs. TrEMBL
Match: tr|A0A0A0L0B3|A0A0A0L0B3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639900 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 5.9e-62
Identity = 158/240 (65.83%), Postives = 163/240 (67.92%), Query Frame = 0 

Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYN-----HLSPPSDHFSSSTTDPHCLETLQQAA 60
           MENDDLKSEDQMEIM        IPEFYN                               
Sbjct: 1   MENDDLKSEDQMEIMXXXXXXXXIPEFYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  ESSSPPFTNNLPYNLPQ--TVPFP--TSSRWRNSGG-ETD-LQKQRSVAAMREMIFRIAV 120
                       YN PQ  TVPFP  +SSRWRNSG  ET+ LQKQRSVAAMREMIFRIAV
Sbjct: 61  XXXXXXXXXXXXYNFPQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMIFRIAV 120

Query: 121 MQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASML 180
           MQPI IDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASML
Sbjct: 121 MQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASML 180

Query: 181 DEAIHYVKFLKTQVQSLERAAT---NRPLPDAAAAAAASGVGFPLEMSSGSYVPMAKPSQ 227
           DEAIHYVKFLKTQVQSLERAA    NRP+       A S VGFPLEMS+GSY+P    SQ
Sbjct: 181 DEAIHYVKFLKTQVQSLERAAVSAGNRPI---TGVGAPSSVGFPLEMSTGSYIPNHHQSQ 237

[Close]
BLAST of Carg26318 vs. TrEMBL
Match: tr|A0A067KZW9|A0A067KZW9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16128 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.7e-61
Identity = 158/279 (56.63%), Postives = 185/279 (66.31%), Query Frame = 0 

Query: 1   MENDDLK--SEDQMEIMMMMQQMEKIPEFYNHLSPPSD-----HFSSSTTDPHCLETLQ- 60
           ME D LK  +EDQME+MMM   M+K+PEFY   +  +D      F  +TT+ +C+ ++  
Sbjct: 1   MEIDQLKCATEDQMEMMMM---MDKLPEFYTPYNDVTDLASPVEFPGATTNTNCINSVNA 60

Query: 61  --------QAAESSSPPFTNNLPYNLP-------------------QTVPFPTS-SRW-- 120
                   Q A S+SPPF   LP N+P                    + P PT+ SR   
Sbjct: 61  IPHFIDNPQIANSNSPPFV-TLPSNMPFASNNNSTTIHEESSQPHFLSNPLPTARSRGVG 120

Query: 121 ----RNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVA 180
                NS   T  QK+ S+AAMREMIFRIA MQPI IDPE+VKPPKRRNVKIS DPQSVA
Sbjct: 121 EFPAANSSYSTQSQKKNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVA 180

Query: 181 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDA 238
           ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA  NRP    
Sbjct: 181 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAQANRP---- 240

[Close]
BLAST of Carg26318 vs. TrEMBL
Match: tr|B9GNV1|B9GNV1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G125000v3 PE=4 SV=2)

HSP 1 Score: 236.9 bits (603), Expect = 4.7e-59
Identity = 153/280 (54.64%), Postives = 177/280 (63.21%), Query Frame = 0 

Query: 1   MENDDLKS--EDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSS----------------ST 60
           ME D L+S  EDQME+MM+   M+K+PEFY+  +  +DH S                 +T
Sbjct: 1   MEIDQLRSATEDQMEMMML---MDKLPEFYDSYNDVADHLSPTEFLAASASNISISHFNT 60

Query: 61  TDPHCLETLQQAAESSSPPFTN---NLPYNLPQT----------VPFPTSSRWRNSGG-- 120
            +PH          +SSPPF N    L  N   T           P P+SSRWR  G   
Sbjct: 61  DNPH---------NASSPPFMNLQSTLSSNSNSTPTQDQSPQDFFPSPSSSRWRGLGELP 120

Query: 121 -----ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHR 180
                 T  QK+ S+A MREMIFRIA MQPIQIDPE+VKPPKRRNVKIS DPQSVAARHR
Sbjct: 121 EANDYATPSQKKNSMATMREMIFRIAAMQPIQIDPESVKPPKRRNVKISKDPQSVAARHR 180

Query: 181 RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAA 238
           RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER   NRP        
Sbjct: 181 RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERFQANRP-------T 240

[Close]
BLAST of Carg26318 vs. TrEMBL
Match: tr|A0A061FIV8|A0A061FIV8_THECC (Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_033818 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.2e-59
Identity = 156/273 (57.14%), Postives = 175/273 (64.10%), Query Frame = 0 

Query: 1   MENDDLKS--EDQMEIMMMMQQMEKIPEFYN------HLSPPSDHFSS--------STTD 60
           ME D LKS  EDQME MMM  QM+K+PEFY        LSP     +S            
Sbjct: 1   MEIDQLKSATEDQME-MMMXXQMDKLPEFYGAYNEVVELSPAELAGASXXXXXXXXXXAT 60

Query: 61  PHCLETLQQAAESSSPPFTNNLPYNL-------------PQTVPFPTSSRWRNSGG---- 120
           PH +E        +SPPF  NLP N+             P  +  P S+RWR +G     
Sbjct: 61  PHFVE---NPHVGNSPPFM-NLPTNISFTGSTPVQEAGPPGFLSSPGSARWRGAGELSGA 120

Query: 121 ---ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRE 180
               T  QK+ S+AAMREMIFRIA MQPI IDPE+VKPPKRRNVKIS DPQSVAARHRRE
Sbjct: 121 NAFSTLSQKKNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRE 180

Query: 181 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAA 238
           RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER A NRP          
Sbjct: 181 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERVAANRP---------- 240

[Close]
BLAST of Carg26318 vs. TrEMBL
Match: tr|A0A1R3HWT5|A0A1R3HWT5_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_26529 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.1e-58
Identity = 155/274 (56.57%), Postives = 181/274 (66.06%), Query Frame = 0 

Query: 1   MENDDLKS--EDQMEIMMMMQQMEKIPEFYN-----------HLSPPSDHFSSSTTDPHC 60
           ME + LKS  EDQME+MMMM QM+K+PEF+             LSP + + +++   PH 
Sbjct: 1   MEIEQLKSATEDQMEMMMMM-QMDKLPEFFGAYNDVVELPPAELSPGASN-NNTANIPHF 60

Query: 61  LETLQQAAESSSPPFTNNL---PYNLPQTVPFP------------TSSRWRNSGGE---- 120
           +ET         PPF N+L    +N    V  P             S+RWR   GE    
Sbjct: 61  VET---------PPFINHLSTISFNGSTPVQEPGGAAAGFLSSPGGSARWRGGAGELSGA 120

Query: 121 ----TDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRE 180
               T  QK+ S+AAMREMIFRIA MQPI IDPE+VKPPKRRNVKIS DPQSVAARHRRE
Sbjct: 121 NAFSTPSQKKNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRE 180

Query: 181 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAA 238
           RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA NRP          
Sbjct: 181 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP--------TT 240

The following BLAST results are available for this feature:
BLAST of Carg26318 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023536625.18.3e-12499.16transcription factor HEC2-like [Cucurbita pepo subsp. pepo][more]
XP_022975973.11.2e-12298.31transcription factor HEC2-like [Cucurbita maxima][more]
XP_022936595.11.8e-11894.58transcription factor HEC2-like [Cucurbita moschata][more]
XP_004141382.19.0e-6265.83PREDICTED: transcription factor HEC2-like [Cucumis sativus] >KGN55203.1 hypothet... [more]
XP_012068336.12.6e-6156.63transcription factor HEC2 [Jatropha curcas] >KDP41721.1 hypothetical protein JCG... [more]
BLAST of Carg26318 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G50330.11.4e-4557.29basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G67060.11.1e-4259.78basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G09750.18.2e-3377.78basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G21330.17.6e-3155.56basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G00120.17.2e-2964.00basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of Carg26318 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SND4|HEC2_ARATH2.6e-4457.29Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1[more]
sp|Q9FHA7|HEC1_ARATH2.1e-4159.78Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1[more]
sp|Q9LXD8|HEC3_ARATH1.5e-3177.78Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1[more]
sp|Q8S3D2|BH087_ARATH1.4e-2955.56Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1[more]
sp|O81313|IND_ARATH1.3e-2764.00Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3[more]
BLAST of Carg26318 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L0B3|A0A0A0L0B3_CUCSA5.9e-6265.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639900 PE=4 SV=1[more]
tr|A0A067KZW9|A0A067KZW9_JATCU1.7e-6156.63Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16128 PE=4 SV=1[more]
tr|B9GNV1|B9GNV1_POPTR4.7e-5954.64Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G125000v3 PE=... [more]
tr|A0A061FIV8|A0A061FIV8_THECC6.2e-5957.14Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao OX=364... [more]
tr|A0A1R3HWT5|A0A1R3HWT5_9ROSI3.1e-5856.57Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_26529 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR036638HLH_DNA-bd_sf
IPR011598bHLH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26318-RACarg26318-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 136..185
e-value: 1.4E-13
score: 61.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 140..179
e-value: 5.9E-6
score: 26.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 130..179
score: 15.218
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 153..184
e-value: 2.68391E-6
score: 42.2011
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3DG3DSA:4.10.280.10coord: 131..192
e-value: 1.1E-11
score: 46.3
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILYSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 135..188
NoneNo IPR availablePANTHERPTHR12565:SF74TRANSCRIPTION FACTOR HEC1-RELATEDcoord: 87..214
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 87..214