CmaCh08G012200 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh08G012200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Dynein beta chain, ciliary
Location	Cma_Chr08 : 7486673 .. 7489504 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCCAACTTTCTTTCATTTCAGAAACTTCAAAGCGGCTCGAGTTCGGCAACTCAGTAAAACCGAGTTGCGACTCACCGATTCGTCATTTCAATTTTCGTCTCCATTTCTCCTGAAAATATAGTCATTAAACCCTCCCACGCGTAGGGTTCTTGATTCTTACGCTGGTTCTGCGACAAATTTCGAATGATTCTGAATCTCCGATTCCAGTTCGTTCAGTAAGATCGCTTCTCGTTTTGAACAAGGAAGCGATGGGACAGGCATTTCGTCGAGCGGCGGAAAGAATCAAGCCGGCTTGGAGCGTGGATTCCACTGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATTGGAAACCTCCGCCGCGTGCGGCCGAGAAGGCTCGGGAGAGCGGCGCTCATGATTCTGGTAATTGTATTTTGTTAATCGTTGGCTGCGTTTCTTTGATTTCTCTGATTTGTTTTTTAGTATTCTTTCTGGAACTTAGATAATAGAGGCTTAAGGTTATTGAATAAGGACTATGTTTCTCTGTTGAATTAAATGCAGTTTCGTAAAATTCCTATGCGCTGTAGATCATCAGGTTTCGATACTGAGCTTTATTTTTGTTCCTTTCCTACCAGTTTCTCTCAATCGCGTTGGTTCTTTTTTTTCTTTCTTTCATTTCATGCGGTTATTGATTATCTTTCTCAGATAATGTACTAGTATTTCTCCACTAGAATTTTGATTTAAGCTCATTTACCACTCATTGATCTGATCGTCAATGAAGTAACTGTTCGTCATTGTTTATCGGCTTTTGTCTCTGTTTCTTCTTTCATTTTTGTTTATCGGATTCTGTCACACTGAACTGAAATGTTTCTGGTTACTGTTCATCACCGTCGCTCTTTCCTCTTTGTATTTGATTTTTTTAGAACTGAGGTTATAGTTTAACAGTTTAATGTGAGCATTTGATTCTGGTTACAGTTTTATTTGATTTTTTGTCCTGAGCTTTGAGTTCGACAGTTCACTTGCTTCTGAGATCGTATCTTTTTCCTTCTTCTCATTATACTATTTCTGTCAGTTGTATTTATTGAGACAGCTCTGCTATTGCGTATTTTTTTCGTTAGCTTCCATTGATTTAGGCTTCCAATGTCTAAGCATGAAAAGAAAGCATAGAGGCCAAGGAAAATGTTCTGGATGCTAGAGATTAATCGATGATTTTCTTTTTATTTCTGGAGCATAATGACATTCCAGTTGGAGTCTCTTTTTGTTCGATTCTCTTTCTCCATTGAATCGAATGCAGTTCCATAGAATCCTATGAGTTCTATATAATCAGATGTGGATAATGAGCTTGATTTTTTGGGACGGTCAATCTGGAAAGGAATAAAGATCAAATCGCTGCAGAAACTACCTATAAAATTATGAACAATTCTGAACAATAACTATGGATAATGAATGTAAATAGTCAGCACTGTCCAACAGTTAGATGGAAACTTAAGATCTCTCCAAAGTCAGTCCGATAATTCTCTTGCCGGCGGGAATGGCCTCATTGGTTATAATATAATTGAATGCTTACCGTTCCCAACTGTTTTTCAGGTGGTGTCTCGGGAAGTAATTCTGGAAATGTGCTTGAGGAATGAGATCTACGGTTTGATGCCATGCTTAGCCATATGGTGGGTCGAAATTAGATCAAAGCCTGGATCAAAACTTGAGATAAGGGAGGTAAGTTTCCACGAAAAGCAGCCAAATTACTCTAACTAGAATACGAGGCATTGCATATATTCTACTATTGATTCGAACTCTAGTGCATGATCCGATGCTTTCTCTTTATTCTTTTTTCCATTAATAATCCTTGATTATTGACCAGTCTTGCGAAACAAGTGTCATGATCATACACAAAATTTCATAAAAGTTCATATATATTGCAAGTGAATAACAGTAAATTGTTCAATCATTTGATAACATGATAACTATTTAATCTTTAGTAAATGATCGCTCCATAAGAAACTAATTTAATTTTTTCTAGGAGAAAAAAATCCAAGATAAACTACCATGAAGGAAAATTTTAATTTGCCTCGTCACAGATAAGGATGGCTTGTCACTTAGGTTTTTTTTTTTAAAAAATTATTTTTTATTTATTTACTTTTTATCTTCTTATTAGCGAGAACTGAGGAGGTAGAGAAATTAAAGGGTGGTAGAGAAACATTGAAAAAGCAAGTACAATGGTTATCATTTTAATAGCCTAACATTGCTTTCTGTCTTTTATAGTACTTCTTATCTGATTTTGGTGATACTGATAACGTTACAGGGCTCTGTGGTGGAGAGATATGACAGACCAATGCCAAAGCAAATAAATACAGATCTAAAATCCAGTAAATACGAGGATCGCACAGCCCCACCAGGAACTTTAAATGTAGCACAGATGCGCCACATAATCCTCCTAAATGAAGGAAAGGCTGATGACTTCGAGGGGCCAATATGCGTTCACCAAATTGCTGAAAGGTGTAATAGTGTCAGCGTCCATCAAATACAGACGATTTTGCAGTTTCTGTCTCTGCCACCAGAGGACAGTCTTCGAGAGAAAAAGAAGGATCCTTAATAACAGGTTCTTTCTTCTTTTTTTTTTTTTTATTGGTTAACTAAGCATTGAACTTAATTTTTTTGTACTAAATTTTGAAAGTCATTGTTATCATGTTGAACTACTTTCAGGAATGGAGCCAAGAAAACGAGGGAAGGGGCGTTGCTCCCCTAAGATGAGGTTTTAGATCATATCTTTTGTGTCCTTTATTTTAGATTATATTTTCTTTTGCTCCCCTAAGATAAATAGCTTTTGTTTTTAGAATTTTACTAAGATTTTCT

mRNA sequence

CCCTCCAACTTTCTTTCATTTCAGAAACTTCAAAGCGGCTCGAGTTCGGCAACTCAGTAAAACCGAGTTGCGACTCACCGATTCGTCATTTCAATTTTCGTCTCCATTTCTCCTGAAAATATAGTCATTAAACCCTCCCACGCGTAGGGTTCTTGATTCTTACGCTGGTTCTGCGACAAATTTCGAATGATTCTGAATCTCCGATTCCAGTTCGTTCAGTAAGATCGCTTCTCGTTTTGAACAAGGAAGCGATGGGACAGGCATTTCGTCGAGCGGCGGAAAGAATCAAGCCGGCTTGGAGCGTGGATTCCACTGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATTGGAAACCTCCGCCGCGTGCGGCCGAGAAGGCTCGGGAGAGCGGCGCTCATGATTCTGTCAGCACTGTCCAACAGTTAGATGGAAACTTAAGATCTCTCCAAAGTCAGTCCGATAATTCTCTTGCCGGCGGGAATGGCCTCATTGGTTATAATATAATTGAATGCTTACCGTTCCCAACTGTTTTTCAGGTGGTGTCTCGGGAAGTAATTCTGGAAATGTGCTTGAGGAATGAGATCTACGGTTTGATGCCATGCTTAGCCATATGGTGGGTCGAAATTAGATCAAAGCCTGGATCAAAACTTGAGATAAGGGAGGGCTCTGTGGTGGAGAGATATGACAGACCAATGCCAAAGCAAATAAATACAGATCTAAAATCCAGTAAATACGAGGATCGCACAGCCCCACCAGGAACTTTAAATGTAGCACAGATGCGCCACATAATCCTCCTAAATGAAGGAAAGGCTGATGACTTCGAGGGGCCAATATGCGTTCACCAAATTGCTGAAAGGTGTAATAGTGTCAGCGTCCATCAAATACAGACGATTTTGCAGTTTCTGTCTCTGCCACCAGAGGACAGTCTTCGAGAGAAAAAGAAGGATCCTTAATAACAGGAATGGAGCCAAGAAAACGAGGGAAGGGGCGTTGCTCCCCTAAGATGAGGTTTTAGATCATATCTTTTGTGTCCTTTATTTTAGATTATATTTTCTTTTGCTCCCCTAAGATAAATAGCTTTTGTTTTTAGAATTTTACTAAGATTTTCT

Coding sequence (CDS)

ATGGGACAGGCATTTCGTCGAGCGGCGGAAAGAATCAAGCCGGCTTGGAGCGTGGATTCCACTGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATTGGAAACCTCCGCCGCGTGCGGCCGAGAAGGCTCGGGAGAGCGGCGCTCATGATTCTGTCAGCACTGTCCAACAGTTAGATGGAAACTTAAGATCTCTCCAAAGTCAGTCCGATAATTCTCTTGCCGGCGGGAATGGCCTCATTGGTTATAATATAATTGAATGCTTACCGTTCCCAACTGTTTTTCAGGTGGTGTCTCGGGAAGTAATTCTGGAAATGTGCTTGAGGAATGAGATCTACGGTTTGATGCCATGCTTAGCCATATGGTGGGTCGAAATTAGATCAAAGCCTGGATCAAAACTTGAGATAAGGGAGGGCTCTGTGGTGGAGAGATATGACAGACCAATGCCAAAGCAAATAAATACAGATCTAAAATCCAGTAAATACGAGGATCGCACAGCCCCACCAGGAACTTTAAATGTAGCACAGATGCGCCACATAATCCTCCTAAATGAAGGAAAGGCTGATGACTTCGAGGGGCCAATATGCGTTCACCAAATTGCTGAAAGGTGTAATAGTGTCAGCGTCCATCAAATACAGACGATTTTGCAGTTTCTGTCTCTGCCACCAGAGGACAGTCTTCGAGAGAAAAAGAAGGATCCTTAA

Protein sequence

MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSREVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSLREKKKDP

Homology

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BLAST of CmaCh08G012200 vs. TrEMBL
Match: A0A0A0KCC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G196710 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-36
Identity = 83/108 (76.85%), Postives = 93/108 (86.11%), Query Frame = 1


Query: 125 IRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNE 184
           I+SKPG KLE+ E SVVERY RPMPK  +T++ SSKYEDR APPGTLNVAQMR IILL+E
Sbjct: 82  IKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHE 141

Query: 185 GKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSLREKKKD 233
           GKADD +GP+ +HQIAER N VSV QIQTILQFLSLPPEDSLR+K KD
Sbjct: 142 GKADDHDGPMGLHQIAERYN-VSVAQIQTILQFLSLPPEDSLRDKIKD 188

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BLAST of CmaCh08G012200 vs. TrEMBL
Match: A0A067K6A1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18860 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.9e-30
Identity = 92/229 (40.17%), Postives = 130/229 (56.77%), Query Frame = 1


Query: 1   MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDG 60
           MGQAFRRA+ RI+ A                D  P P++  + R       + T  +LD 
Sbjct: 1   MGQAFRRASGRIRAA----------------DPSPTPKSVGEQRPP-----LGTTDKLDI 60

Query: 61  NLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSREVILEMCLRNEIYGLMPCLAI 120
           + ++ Q  + +S+   +                   V+ + +LE   R+  +  M  L+ 
Sbjct: 61  SRKTTQYNNQDSIDSDDA----------------PKVNADNVLEE--RDPQFDAM--LSQ 120

Query: 121 WWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHII 180
               IRSKPG KLEI E +VVERY+RPMPK  NT   S +YE+R  PPGTLNVAQ+RH++
Sbjct: 121 MVGRIRSKPGGKLEIGEAAVVERYNRPMPKLRNTKPDSDRYEERATPPGTLNVAQLRHLM 180

Query: 181 LLNEGKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSLREK 230
           LL++GKADD  GP+ +HQI+E+   + V Q+Q ILQF+SLPPEDS ++K
Sbjct: 181 LLHQGKADDHNGPVDIHQISEKF-QLEVAQVQQILQFVSLPPEDSNKQK 187

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BLAST of CmaCh08G012200 vs. TrEMBL
Match: M5Y7K2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019086mg PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 9.3e-30
Identity = 95/230 (41.30%), Postives = 136/230 (59.13%), Query Frame = 1


Query: 1   MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRA-AEKARESGAHDSVSTVQQLD 60
           MGQA RRAA RI+P+ S+++T++  K   VVD +PPP    E A  S A D++++    D
Sbjct: 1   MGQALRRAAGRIRPSSSIETTSAKPKTV-VVDKRPPPLGPTESAEISKAGDALNS----D 60

Query: 61  GNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSREVILEMCLRNEIYGLMPCLA 120
           G+  +         AG   +   N++E            R+   +  L N++ G      
Sbjct: 61  GSAATAAEAE----AGAANV--ENVLE-----------ERDPSYDAML-NQMVG------ 120

Query: 121 IWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHI 180
                I+SKPG KLE+ E  VVE+Y RP+PK  +T   S +YE+R A PGTLNVAQ+RHI
Sbjct: 121 ----RIKSKPGGKLEMGEAFVVEKYKRPLPKLRDTKPDSGRYEERPAAPGTLNVAQLRHI 180

Query: 181 ILLNEGKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSLREK 230
           ILL++GKA+D  GP+   QIA++   V V +++ ILQF+SLPPEDS ++K
Sbjct: 181 ILLHQGKAEDHNGPMEADQIADKFR-VDVAEVRRILQFVSLPPEDSSKQK 196

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BLAST of CmaCh08G012200 vs. TrEMBL
Match: W9RHF0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023546 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.3e-28
Identity = 95/234 (40.60%), Postives = 129/234 (55.13%), Query Frame = 1


Query: 1   MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPP--PRAAEKARESGAHDSVSTVQQL 60
           MGQAFRRA+ RI+ + S D T SS   ++  D  PP  P   E+  ++G         +L
Sbjct: 1   MGQAFRRASGRIRASSSADLTPSSSAAKNAADRCPPVGPTGGEETSKAG---------EL 60

Query: 61  DGNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSREVILEMCLRNEIYGLMPCL 120
            G  R+L S       G  G    N++E            R+   +  L +++ G     
Sbjct: 61  SG--RALDSD------GAVGKNPDNVLE-----------ERDPQFDAML-SQMAG----- 120

Query: 121 AIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRH 180
                 IR+KPG K E+ E  VVE Y R +PK  NT   SS++E+R  P GTLNV Q+RH
Sbjct: 121 -----RIRTKPGGKPEMGEAFVVENYKRSLPKLRNTKPDSSRFEERPTPAGTLNVTQLRH 180

Query: 181 IILLNEGKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSLREKKKD 233
           ++LL+EGKADD +GP+ VHQIAE+   + V ++Q ILQF+SLPPED    KKKD
Sbjct: 181 VVLLHEGKADDHDGPMDVHQIAEKYR-IDVAEVQRILQFISLPPED----KKKD 190

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BLAST of CmaCh08G012200 vs. TrEMBL
Match: A9PAM5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0034s00210g PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-27
Identity = 94/229 (41.05%), Postives = 122/229 (53.28%), Query Frame = 1


Query: 1   MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDG 60
           MGQAFRRA+ RI+     D   S      V D +PP  + EK        + +T Q   G
Sbjct: 1   MGQAFRRASGRIRAP--PDPPPSR-----VTDRRPPVTSTEKVE---ISSTTTTNQNSPG 60

Query: 61  NLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSREVILEMCLRNEIYGLMPCLAI 120
           +  + +   DN L   +    Y+ +       + Q+V R                     
Sbjct: 61  SDGAPRINPDNVLEERD--TQYDAM-------LSQMVGR--------------------- 120

Query: 121 WWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHII 180
               I+SKPG KLE  E  VVERYDRPMPK  NT   S +YE+R   PGTLNVAQ+RHII
Sbjct: 121 ----IKSKPGGKLETGEAPVVERYDRPMPKLRNTKPDSGRYEERAVAPGTLNVAQLRHII 180

Query: 181 LLNEGKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSLREK 230
           L+ +GKADD EGP+ + QIAE+   + V Q+Q ILQFLSLPPED+ ++K
Sbjct: 181 LMYQGKADDHEGPMNIQQIAEKFR-LEVAQVQRILQFLSLPPEDNNKQK 184

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BLAST of CmaCh08G012200 vs. TAIR10
Match: AT3G21400.1 (AT3G21400.1 unknown protein)

HSP 1 Score: 108.6 bits (270), Expect = 5.2e-24
Identity = 55/107 (51.40%), Postives = 77/107 (71.96%), Query Frame = 1


Query: 125 IRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNE 184
           I++KPG K E+ E SVVE   RP+PK  NT  +S++YE+   P GTLNVAQ+RHI+LL +
Sbjct: 81  IKAKPGGKAEMGEASVVETSKRPLPKLRNTTPESTRYEENPVPQGTLNVAQVRHIMLLFQ 140

Query: 185 GKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSLREKKK 232
           GK+ D  GP+ V++IAE+   + V Q+Q I QFLSLP E + ++KK+
Sbjct: 141 GKSQDHHGPMGVNEIAEKYR-IDVSQVQKITQFLSLPQEITDKQKKQ 186

[Close]

BLAST of CmaCh08G012200 vs. NCBI nr
Match: gi|659117182|ref|XP_008458465.1| (PREDICTED: uncharacterized protein LOC103497865 isoform X1 [Cucumis melo])

HSP 1 Score: 192.6 bits (488), Expect = 7.8e-46
Identity = 127/233 (54.51%), Postives = 144/233 (61.80%), Query Frame = 1


Query: 1   MGQAFRRAAERIKPAWSVDST-ASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLD 60
           MGQAFRRAA RIKPA SVDST ASSLKMES+VD KPPPR A                +  
Sbjct: 1   MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVA----------------EKA 60

Query: 61  GNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSREVILEMCLRNEIYGLMPCLA 120
               SL S    +   GN L                   R+   +  L +++ G      
Sbjct: 61  RESGSLDSGDVTASDSGNRL-----------------EERDPQFDAML-SQMVG------ 120

Query: 121 IWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHI 180
                I+SKPG KLE+ E SVVERY RPMPK  +T++KSSKYEDR APPGTLNVAQMR I
Sbjct: 121 ----RIKSKPGGKLEMGEASVVERYGRPMPKLRDTNIKSSKYEDRPAPPGTLNVAQMRQI 180

Query: 181 ILLNEGKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSLREKKKD 233
           ILL+EGKADD +GP+  HQIAER N VSV QIQTILQFLSLPPEDSLR+K  D
Sbjct: 181 ILLHEGKADDHDGPMGPHQIAERYN-VSVAQIQTILQFLSLPPEDSLRDKITD 188

[Close]

BLAST of CmaCh08G012200 vs. NCBI nr
Match: gi|778714015|ref|XP_011657169.1| (PREDICTED: uncharacterized protein LOC101223121 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 2.5e-36
Identity = 83/108 (76.85%), Postives = 93/108 (86.11%), Query Frame = 1


Query: 125 IRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNE 184
           I+SKPG KLE+ E SVVERY RPMPK  +T++ SSKYEDR APPGTLNVAQMR IILL+E
Sbjct: 82  IKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHE 141

Query: 185 GKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSLREKKKD 233
           GKADD +GP+ +HQIAER N VSV QIQTILQFLSLPPEDSLR+K KD
Sbjct: 142 GKADDHDGPMGLHQIAERYN-VSVAQIQTILQFLSLPPEDSLRDKIKD 188

[Close]

BLAST of CmaCh08G012200 vs. NCBI nr
Match: gi|802701240|ref|XP_012083911.1| (PREDICTED: uncharacterized protein LOC105643411 [Jatropha curcas])

HSP 1 Score: 141.0 bits (354), Expect = 2.7e-30
Identity = 92/229 (40.17%), Postives = 130/229 (56.77%), Query Frame = 1


Query: 1   MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDG 60
           MGQAFRRA+ RI+ A                D  P P++  + R       + T  +LD 
Sbjct: 1   MGQAFRRASGRIRAA----------------DPSPTPKSVGEQRPP-----LGTTDKLDI 60

Query: 61  NLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSREVILEMCLRNEIYGLMPCLAI 120
           + ++ Q  + +S+   +                   V+ + +LE   R+  +  M  L+ 
Sbjct: 61  SRKTTQYNNQDSIDSDDA----------------PKVNADNVLEE--RDPQFDAM--LSQ 120

Query: 121 WWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHII 180
               IRSKPG KLEI E +VVERY+RPMPK  NT   S +YE+R  PPGTLNVAQ+RH++
Sbjct: 121 MVGRIRSKPGGKLEIGEAAVVERYNRPMPKLRNTKPDSDRYEERATPPGTLNVAQLRHLM 180

Query: 181 LLNEGKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSLREK 230
           LL++GKADD  GP+ +HQI+E+   + V Q+Q ILQF+SLPPEDS ++K
Sbjct: 181 LLHQGKADDHNGPVDIHQISEKF-QLEVAQVQQILQFVSLPPEDSNKQK 187

[Close]

BLAST of CmaCh08G012200 vs. NCBI nr
Match: gi|596293875|ref|XP_007226741.1| (hypothetical protein PRUPE_ppa019086mg [Prunus persica])

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 95/230 (41.30%), Postives = 136/230 (59.13%), Query Frame = 1


Query: 1   MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRA-AEKARESGAHDSVSTVQQLD 60
           MGQA RRAA RI+P+ S+++T++  K   VVD +PPP    E A  S A D++++    D
Sbjct: 1   MGQALRRAAGRIRPSSSIETTSAKPKTV-VVDKRPPPLGPTESAEISKAGDALNS----D 60

Query: 61  GNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSREVILEMCLRNEIYGLMPCLA 120
           G+  +         AG   +   N++E            R+   +  L N++ G      
Sbjct: 61  GSAATAAEAE----AGAANV--ENVLE-----------ERDPSYDAML-NQMVG------ 120

Query: 121 IWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHI 180
                I+SKPG KLE+ E  VVE+Y RP+PK  +T   S +YE+R A PGTLNVAQ+RHI
Sbjct: 121 ----RIKSKPGGKLEMGEAFVVEKYKRPLPKLRDTKPDSGRYEERPAAPGTLNVAQLRHI 180

Query: 181 ILLNEGKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSLREK 230
           ILL++GKA+D  GP+   QIA++   V V +++ ILQF+SLPPEDS ++K
Sbjct: 181 ILLHQGKAEDHNGPMEADQIADKFR-VDVAEVRRILQFVSLPPEDSSKQK 196

[Close]

BLAST of CmaCh08G012200 vs. NCBI nr
Match: gi|645233095|ref|XP_008223178.1| (PREDICTED: uncharacterized protein LOC103323000 [Prunus mume])

HSP 1 Score: 137.5 bits (345), Expect = 3.0e-29
Identity = 91/229 (39.74%), Postives = 131/229 (57.21%), Query Frame = 1


Query: 1   MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDG 60
           MGQA RRAA RI+P+ S+++T++  K   VVD +PPP    +  E            +  
Sbjct: 1   MGQALRRAAGRIRPSSSIETTSAKPKTV-VVDKRPPPLGPTETAE------------IVP 60

Query: 61  NLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSREVILEMCLRNEIYGLMPCLAI 120
           +L +  S +  + AG       N++E            R+   +  L N++ G       
Sbjct: 61  SLFTHGSAATEAEAGAGAANVENVLE-----------ERDPSYDAML-NQMVG------- 120

Query: 121 WWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHII 180
               I+SKPG KLE+ E  VVE+Y RP+PK  +T   S +YE+R A PGTLNVAQ+RHII
Sbjct: 121 ---RIKSKPGGKLEMGEAFVVEKYKRPLPKLRDTKPDSGRYEERPAAPGTLNVAQLRHII 180

Query: 181 LLNEGKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSLREK 230
           LL++GKA+D  GP+   QIA++   V V +++ ILQF+SLPPEDS ++K
Sbjct: 181 LLHQGKAEDHNGPMEADQIADKFR-VDVAEVRRILQFVSLPPEDSSKQK 193

The following BLAST results are available for this feature:

BLAST of CmaCh08G012200 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh08G012200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCC5_CUCSA	1.8e-36	76.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G196710 PE=4 SV=1	[more]
A0A067K6A1_JATCU	1.9e-30	40.17	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18860 PE=4 SV=1	[more]
M5Y7K2_PRUPE	9.3e-30	41.30	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019086mg PE=4 SV=1	[more]
W9RHF0_9ROSA	2.3e-28	40.60	Uncharacterized protein OS=Morus notabilis GN=L484_023546 PE=4 SV=1	[more]
A9PAM5_POPTR	1.1e-27	41.05	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0034s00210g PE=2 SV=1	[more]

BLAST of CmaCh08G012200 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G21400.1	5.2e-24	51.40	unknown protein	[more]

BLAST of CmaCh08G012200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117182\|ref\|XP_008458465.1\|	7.8e-46	54.51	PREDICTED: uncharacterized protein LOC103497865 isoform X1 [Cucumis melo]	[more]
gi\|778714015\|ref\|XP_011657169.1\|	2.5e-36	76.85	PREDICTED: uncharacterized protein LOC101223121 [Cucumis sativus]	[more]
gi\|802701240\|ref\|XP_012083911.1\|	2.7e-30	40.17	PREDICTED: uncharacterized protein LOC105643411 [Jatropha curcas]	[more]
gi\|596293875\|ref\|XP_007226741.1\|	1.3e-29	41.30	hypothetical protein PRUPE_ppa019086mg [Prunus persica]	[more]
gi\|645233095\|ref\|XP_008223178.1\|	3.0e-29	39.74	PREDICTED: uncharacterized protein LOC103323000 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G012200.1	CmaCh08G012200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36759	FAMILY NOT NAMED	coord: 125..233 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh08G012200	Cucsa.172190	Cucumber (Gy14) v1	cgycmaB0489
CmaCh08G012200	Cla009314	Watermelon (97103) v1	cmawmB878
CmaCh08G012200	Csa6G196710	Cucumber (Chinese Long) v2	cmacuB907
CmaCh08G012200	MELO3C021343	Melon (DHL92) v3.5.1	cmameB816
CmaCh08G012200	ClCG06G005230	Watermelon (Charleston Gray)	cmawcgB804
CmaCh08G012200	CSPI06G14810	Wild cucumber (PI 183967)	cmacpiB927
CmaCh08G012200	Cp4.1LG12g02750	Cucurbita pepo (Zucchini)	cmacpeB895
CmaCh08G012200	Cp4.1LG17g00840	Cucurbita pepo (Zucchini)	cmacpeB915
CmaCh08G012200	MELO3C021343.2	Melon (DHL92) v3.6.1	cmamedB914
CmaCh08G012200	CsaV3_6G017270	Cucumber (Chinese Long) v3	cmacucB1076
CmaCh08G012200	Cla97C06G114730	Watermelon (97103) v2	cmawmbB921
CmaCh08G012200	Bhi12G001841	Wax gourd	cmawgoB1098
CmaCh08G012200	CsGy6G014660	Cucumber (Gy14) v2	cgybcmaB875
CmaCh08G012200	Carg18835	Silver-seed gourd	carcmaB0988
CmaCh08G012200	Carg05497	Silver-seed gourd	carcmaB0096

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh08G012200	CmaCh17G003170	Cucurbita maxima (Rimu)	cmacmaB373

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh08G012200	Cucurbita pepo (Zucchini)	cmacpeB928
CmaCh08G012200	Cucurbita pepo (Zucchini)	cmacpeB931
CmaCh08G012200	Bottle gourd (USVL1VR-Ls)	cmalsiB811
CmaCh08G012200	Bottle gourd (USVL1VR-Ls)	cmalsiB834
CmaCh08G012200	Cucumber (Gy14) v2	cgybcmaB454
CmaCh08G012200	Melon (DHL92) v3.6.1	cmamedB950
CmaCh08G012200	Silver-seed gourd	carcmaB0850
CmaCh08G012200	Silver-seed gourd	carcmaB1156
CmaCh08G012200	Cucumber (Chinese Long) v3	cmacucB1049
CmaCh08G012200	Watermelon (97103) v2	cmawmbB914
CmaCh08G012200	Watermelon (97103) v2	cmawmbB945
CmaCh08G012200	Wax gourd	cmawgoB1107
CmaCh08G012200	Cucurbita maxima (Rimu)	cmacmaB298
CmaCh08G012200	Cucurbita maxima (Rimu)	cmacmaB391
CmaCh08G012200	Cucurbita maxima (Rimu)	cmacmaB554
CmaCh08G012200	Cucumber (Gy14) v1	cgycmaB0731
CmaCh08G012200	Cucurbita moschata (Rifu)	cmacmoB883
CmaCh08G012200	Cucurbita moschata (Rifu)	cmacmoB887
CmaCh08G012200	Cucurbita moschata (Rifu)	cmacmoB910
CmaCh08G012200	Cucurbita moschata (Rifu)	cmacmoB912
CmaCh08G012200	Wild cucumber (PI 183967)	cmacpiB903
CmaCh08G012200	Cucumber (Chinese Long) v2	cmacuB885
CmaCh08G012200	Melon (DHL92) v3.5.1	cmameB850
CmaCh08G012200	Watermelon (Charleston Gray)	cmawcgB791
CmaCh08G012200	Watermelon (Charleston Gray)	cmawcgB796
CmaCh08G012200	Watermelon (97103) v1	cmawmB861
CmaCh08G012200	Watermelon (97103) v1	cmawmB869