CsGy6G014660 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G014660
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	dynein beta chain%2C ciliary protein
Location	Chr6 : 12856796 .. 12859852 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTATCGGATCGGCAACGTTCGCCCTCCTAACACTTTTTATTTTCTTCTTAGCCCCTCGAGTTTCGAACTCACTAAAATACGAGTCACGACTCACCCGATTCCTCATTTCATCTCCATCTCCTTTCCCCCTGAAAATTTCTCGTAAAACCCTCCGTCTCGTAGGGTTCTGATCAATTTTTGTACGAATCTGAACCTCTGATTCCAGTTCGTTTTGTGAGATCGTTGCTCTTTTTGAAGAAGGAAAGGATGGGACAGGCATTTCGTCGAGCAGCTGGAAGAATCAAACCGGCTTCGAGTATTGATTCCACTACCGCCTCTTCGTTGAAAATGGAAAGCATCGTCGATCGGAAGCCTCCGCCGCGTGTGGCCGAGAAGGCTCGGGAGAGTGGCGCTCTTGATTCCGGTAATTGTCATTTGTTAATCGTTTGTGGTGTCTTGAGAATTGAGACCGGAGATTCATGCACGAGGATTATTTATTTTTCTCTGTTTAGTTAAATGCAGTTTTGTAGAATTCGTATGTGTTGTTTATCATCCGATTTCGATAACGAGCTTCAGTTTTTTGGATAACTTCTTTTCCTTCTGCTTTCTCCTACTAGCTTTTGCTGTTATTGATTATCTTCCCTAGGTAATGTAGCGGCATTTCTCCATTAGGATCTGAATTTAAAAGTTCATTTACTATTGATCTGATCATTATCACTTAATTAACTGTTCTCCTTCCGTTTTTTTCTTGTTTCACGACTTCTGTCTTTCTGAACTGAAATATCTCCTGGTTACTGTTCATTATCGTCTATCTTTTTTCTTAGTGCATGATTTTGTAGAAGTAGAATTATGGACGAAGTTACTGTTGAATGTGAGCATTTCCTTCTGGTTACGGTTTTATGTGATCTTTTTTATCCTAAGCATTGAGTTCACTTGCTTATTAGATTGTGATTGTCTTCTTATATTATTTCTGTTAGTTGCATTTATGGAGACAAAGTTTAGAAGTTTTTTGTCCTCTGCTTCTATTGCGTATGTTTTTCGTCAGCTTCCGTTGATTTAGACTTCCGGTGTCTAAACATGTAAAAAGAAAAAAACAGAGGCCATGAAAAAACTTCCAAATGATTTAGGCTTGCGTATGCTCTTTTTGTTTGATTCTCTTTCTTCGGTTGAGCCAAATGCAGCTCGACAGAATTCCTTTGAGATCTATATAATCGGATTTTGATAACGAGCTTGCTTTTTTTTGCATGTGAATTGCAAAACGTTGTCGAAAGTCACTTCAAAATCAGTGTGATGTGTTTTCTGCTGACAGGAATTGATTCATAGAATGCAATATAATCGAATGATAACCACTTTCTATTGTTCCCTCAGGTGATGTCCCGGCAAGTGATTCGGGAAACATGCTTGAAGAACGAGATCCCCAATTTGATGCCATGCTTAGCCAAATGGTGGGTCGGATAAAATCAAAGCCCGGAGGAAAACTTGAGATGGGGGAGGTAAGTTTCCATAAGAAACTGCCAAATTACTCTCAAAATTTTAGGCATTGAATATAATTTCAAGACTGCTTTTAACGGTTGAGTATGATCCGATGCTCGATTCCTTACTTCATTAGTAATCCTTATTGTAGGAATCTGGTGTGATCCTACTGATAACTTCATAAAGATTAATCTAAACTGTTAGCAAATAACTGATCACTTGGTAACTAGTCAATCTTTATCATCTATATCGAAACACTATTTAAATTTGTGATTTCGGAAGACTATAAGTTAATAGTCTTTGTCTTTAATTGTTAGGAGAAAAAAGTCCAAGCTACACACAATGGATAATTTTTTTTTATAATAACTCCTTCAAAATCGTGATGGTACCTCACATCAGAAATATGGAGAATTATTTTTTTTTCTCTCTCTATATATATTGGTGAGGAGGCAAGTTTTATTATTTTATTTAGAAGAAAAATTTTCTGAGCCTCCTTGGTCTAAGTAAGTAATCTAGGCAAGGAGATTCCTCTTCTCTTTGGCTTTCTGGATAGTCTCTTGTATTTGTACATCTATCTATCTACACAAATTGATAATCATATGATCATTTGCAAAGACAATTGTAATATATATATCCATTGATGTGTGAGGTGACAATTGGCATTTTGTTCACTAAGTTATGCTCAAATGAGTTAATTACTTAGGACAGGTTTGAGAGTGGTTTAGAAATGGTTAATTTTTTTTTAAAAAATCAAAATCATATTTCATGTAATAAAATTTGCTTTGTAAAGTATAAAATTAGACTATTTCCAAAAAAAAAGAAGAAAAATTGTGATTAAAAGCACTTCAATGTTTTGTTTCAAACTCTTAATCAATGAAAAAGTTCTGTTAGACGAGTTTGGTTTTTGACATTTTAAAATCATTTCTAAATATGCCCCTACCATTTAAAAAAGTCCTAATGTGATAGTGATTTGTGATTTGATAAATGTAACAGGCCTCTGTGGTGGAGAGATACGGAAGACCAATGCCAAAGCTAAGAGATACAAATATAAGTTCAAGTAAATACGAGGATCGGCCAGCCCCACCAGGAACACTAAACGTAGCACAGATGCGACAAATAATTCTCTTACACGAAGGTAAGGCCGATGATCATGATGGGCCAATGGGACTTCACCAAATTGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAAACCATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTAGAGACAAAATCAAGGATTCTTAATTGAACAGGTTTTTATTTATTTTTTACTCTCGTTTTGTGTTTTGGGACTAACCAACCATTAAGTTTAGTTTTTATGTACTAAATTTTGAATGTTATTTTTAACACTTGGAAATTCCGTCCAGGAATGGAGCCATGAAAACAACGGTAGGGGCGATTTGCTCCTAAGAAGAAATAATAAAGGTTCCAAAAGTTTTCTCAATTATTTTATACCGAGTCTTTAAACTCTTGATTTTATGTACATTACAATGTCCTTGAATTTTTCAATTTTATGTCCACTAGAGTTTTCGGCTTGTTTAATTTCATTTTTTTTAAAAAAAAAAA

mRNA sequence

GAATTATCGGATCGGCAACGTTCGCCCTCCTAACACTTTTTATTTTCTTCTTAGCCCCTCGAGTTTCGAACTCACTAAAATACGAGTCACGACTCACCCGATTCCTCATTTCATCTCCATCTCCTTTCCCCCTGAAAATTTCTCGTAAAACCCTCCGTCTCGTAGGGTTCTGATCAATTTTTGTACGAATCTGAACCTCTGATTCCAGTTCGTTTTGTGAGATCGTTGCTCTTTTTGAAGAAGGAAAGGATGGGACAGGCATTTCGTCGAGCAGCTGGAAGAATCAAACCGGCTTCGAGTATTGATTCCACTACCGCCTCTTCGTTGAAAATGGAAAGCATCGTCGATCGGAAGCCTCCGCCGCGTGTGGCCGAGAAGGCTCGGGAGAGTGGCGCTCTTGATTCCGGTGATGTCCCGGCAAGTGATTCGGGAAACATGCTTGAAGAACGAGATCCCCAATTTGATGCCATGCTTAGCCAAATGGTGGGTCGGATAAAATCAAAGCCCGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGATACGGAAGACCAATGCCAAAGCTAAGAGATACAAATATAAGTTCAAGTAAATACGAGGATCGGCCAGCCCCACCAGGAACACTAAACGTAGCACAGATGCGACAAATAATTCTCTTACACGAAGGTAAGGCCGATGATCATGATGGGCCAATGGGACTTCACCAAATTGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAAACCATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTAGAGACAAAATCAAGGATTCTTAATTGAACAGGAATGGAGCCATGAAAACAACGGTAGGGGCGATTTGCTCCTAAGAAGAAATAATAAAGGTTCCAAAAGTTTTCTCAATTATTTTATACCGAGTCTTTAAACTCTTGATTTTATGTACATTACAATGTCCTTGAATTTTTCAATTTTATGTCCACTAGAGTTTTCGGCTTGTTTAATTTCATTTTTTTTAAAAAAAAAAA

Coding sequence (CDS)

ATGGGACAGGCATTTCGTCGAGCAGCTGGAAGAATCAAACCGGCTTCGAGTATTGATTCCACTACCGCCTCTTCGTTGAAAATGGAAAGCATCGTCGATCGGAAGCCTCCGCCGCGTGTGGCCGAGAAGGCTCGGGAGAGTGGCGCTCTTGATTCCGGTGATGTCCCGGCAAGTGATTCGGGAAACATGCTTGAAGAACGAGATCCCCAATTTGATGCCATGCTTAGCCAAATGGTGGGTCGGATAAAATCAAAGCCCGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGATACGGAAGACCAATGCCAAAGCTAAGAGATACAAATATAAGTTCAAGTAAATACGAGGATCGGCCAGCCCCACCAGGAACACTAAACGTAGCACAGATGCGACAAATAATTCTCTTACACGAAGGTAAGGCCGATGATCATGATGGGCCAATGGGACTTCACCAAATTGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAAACCATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTAGAGACAAAATCAAGGATTCTTAA

Protein sequence

MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS

Homology

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BLAST of CsGy6G014660 vs. NCBI nr
Match: XP_011657169.1 (PREDICTED: uncharacterized protein LOC101223121 [Cucumis sativus] >KGN47188.1 hypothetical protein Csa_6G196710 [Cucumis sativus])

HSP 1 Score: 369.4 bits (947), Expect = 7.3e-99
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60
           MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS
Sbjct: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60

Query: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120
           GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED
Sbjct: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120

Query: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180
           RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED
Sbjct: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180

Query: 181 SLRDKIKDS 190
           SLRDKIKDS
Sbjct: 181 SLRDKIKDS 189

[Close]

BLAST of CsGy6G014660 vs. NCBI nr
Match: XP_008458465.1 (PREDICTED: uncharacterized protein LOC103497865 isoform X1 [Cucumis melo])

HSP 1 Score: 355.9 bits (912), Expect = 8.4e-95
Identity = 182/189 (96.30%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60
           MGQAFRRAAGRIKPASS+DSTTASSLKMESIVDRKPPPRVAEKARESG+LDSGDV ASDS
Sbjct: 1   MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDS 60

Query: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120
           GN LEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNI SSKYED
Sbjct: 61  GNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNIKSSKYED 120

Query: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180
           RPAPPGTLNVAQMRQIILLHEGKADDHDGPMG HQIAERYNVSVAQIQTILQFLSLPPED
Sbjct: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPED 180

Query: 181 SLRDKIKDS 190
           SLRDKI DS
Sbjct: 181 SLRDKITDS 189

[Close]

BLAST of CsGy6G014660 vs. NCBI nr
Match: XP_023006464.1 (uncharacterized protein LOC111499180 [Cucurbita maxima])

HSP 1 Score: 322.8 bits (826), Expect = 7.9e-85
Identity = 165/189 (87.30%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60
           MGQAFRRAAGRIKPASSIDS +ASSLKMES+VDRKPPPR AEKARESG+LDSGDV  S+S
Sbjct: 1   MGQAFRRAAGRIKPASSIDS-SASSLKMESVVDRKPPPRAAEKARESGSLDSGDVLGSNS 60

Query: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120
           GN+LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVERY RPMPKLR+T++ SSKYED
Sbjct: 61  GNVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYNRPMPKLRNTDLKSSKYED 120

Query: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180
           RPAPPGTLNVAQMR IILLHEGKADDHDGPMG++QIAERYNV V+QI+TILQFLSLPPED
Sbjct: 121 RPAPPGTLNVAQMRHIILLHEGKADDHDGPMGVNQIAERYNVGVSQIRTILQFLSLPPED 180

Query: 181 SLRDKIKDS 190
           SLRDK K S
Sbjct: 181 SLRDKKKGS 188

[Close]

BLAST of CsGy6G014660 vs. NCBI nr
Match: XP_022958820.1 (uncharacterized protein LOC111459975 [Cucurbita moschata])

HSP 1 Score: 317.0 bits (811), Expect = 4.3e-83
Identity = 163/189 (86.24%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60
           MGQAFRRAAGRIKPASSIDS +ASSLKMES+VDRKPPPR AEKARESGALDSGDV  S+S
Sbjct: 1   MGQAFRRAAGRIKPASSIDS-SASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNS 60

Query: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120
            N+LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVERY RPMP+LR+T++ SSKYED
Sbjct: 61  ENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYDRPMPRLRNTDLKSSKYED 120

Query: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180
           RPAPPGTLNVAQMR I+LLHEGKA+DHDGPMG++QIAERYNV VAQI+TILQFLSLPPED
Sbjct: 121 RPAPPGTLNVAQMRHIMLLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPED 180

Query: 181 SLRDKIKDS 190
           SLRDK K S
Sbjct: 181 SLRDKKKVS 188

[Close]

BLAST of CsGy6G014660 vs. NCBI nr
Match: XP_023547640.1 (uncharacterized protein LOC111806523 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.7 bits (805), Expect = 2.1e-82
Identity = 162/189 (85.71%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60
           MGQAFRRAAGRIKPASSIDS +ASSLKMES+VDRKPPPR  EKARESGALDSGD   S+S
Sbjct: 1   MGQAFRRAAGRIKPASSIDS-SASSLKMESVVDRKPPPRAVEKARESGALDSGDDLGSNS 60

Query: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120
            N+LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVERY RPMP+LR+T++ SSKYED
Sbjct: 61  ENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYDRPMPRLRNTDLKSSKYED 120

Query: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180
           RPAPPGTLNVAQMR IILLHEGKA+DHDGPMG++QIAERYNV VAQI+TILQFLSLPPED
Sbjct: 121 RPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPED 180

Query: 181 SLRDKIKDS 190
           SLRDK K S
Sbjct: 181 SLRDKKKGS 188

[Close]

BLAST of CsGy6G014660 vs. TAIR10
Match: AT3G21400.1 (unknown protein)

HSP 1 Score: 176.4 bits (446), Expect = 1.7e-44
Identity = 98/189 (51.85%), Postives = 125/189 (66.14%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTTAS----SLKMESIVDRKPPPRVAEKARESGALDSGDVP 60
           MGQ  RRA G+IK       +  S    SL  E +   K  P     A   G  D G   
Sbjct: 1   MGQQLRRAVGKIKEVERSSPSRVSIDRRSLPTEELSAVKSSP---STAAVDGVSDKGRRT 60

Query: 61  ASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSS 120
           + D  N+LEERDP++D ML+QMVGRIK+KPGGK EMGEASVVE   RP+PKLR+T   S+
Sbjct: 61  SED--NVLEERDPKYDTMLNQMVGRIKAKPGGKAEMGEASVVETSKRPLPKLRNTTPEST 120

Query: 121 KYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSL 180
           +YE+ P P GTLNVAQ+R I+LL +GK+ DH GPMG+++IAE+Y + V+Q+Q I QFLSL
Sbjct: 121 RYEENPVPQGTLNVAQVRHIMLLFQGKSQDHHGPMGVNEIAEKYRIDVSQVQKITQFLSL 180

Query: 181 PPEDSLRDK 186
           P E + + K
Sbjct: 181 PQEITDKQK 184

[Close]

BLAST of CsGy6G014660 vs. TrEMBL
Match: tr|A0A0A0KCC5|A0A0A0KCC5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G196710 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 4.9e-99
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60
           MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS
Sbjct: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60

Query: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120
           GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED
Sbjct: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120

Query: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180
           RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED
Sbjct: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180

Query: 181 SLRDKIKDS 190
           SLRDKIKDS
Sbjct: 181 SLRDKIKDS 189

[Close]

BLAST of CsGy6G014660 vs. TrEMBL
Match: tr|A0A1S3C957|A0A1S3C957_CUCME (uncharacterized protein LOC103497865 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497865 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 5.6e-95
Identity = 182/189 (96.30%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60
           MGQAFRRAAGRIKPASS+DSTTASSLKMESIVDRKPPPRVAEKARESG+LDSGDV ASDS
Sbjct: 1   MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDS 60

Query: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120
           GN LEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNI SSKYED
Sbjct: 61  GNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNIKSSKYED 120

Query: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180
           RPAPPGTLNVAQMRQIILLHEGKADDHDGPMG HQIAERYNVSVAQIQTILQFLSLPPED
Sbjct: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPED 180

Query: 181 SLRDKIKDS 190
           SLRDKI DS
Sbjct: 181 SLRDKITDS 189

[Close]

BLAST of CsGy6G014660 vs. TrEMBL
Match: tr|A0A1S3C7E9|A0A1S3C7E9_CUCME (uncharacterized protein LOC103497865 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497865 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.3e-67
Identity = 136/141 (96.45%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60
           MGQAFRRAAGRIKPASS+DSTTASSLKMESIVDRKPPPRVAEKARESG+LDSGDV ASDS
Sbjct: 1   MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDS 60

Query: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120
           GN LEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNI SSKYED
Sbjct: 61  GNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNIKSSKYED 120

Query: 121 RPAPPGTLNVAQMRQIILLHE 142
           RPAPPGTLNVAQMRQIILLHE
Sbjct: 121 RPAPPGTLNVAQMRQIILLHE 141

[Close]

BLAST of CsGy6G014660 vs. TrEMBL
Match: tr|A0A2N9IC80|A0A2N9IC80_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49363 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 3.9e-56
Identity = 115/192 (59.90%), Postives = 144/192 (75.00%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPP-------PRVAEKARESGALDSG 60
           MGQAFRRA+GRIK + SIDS T    K + +VD +PP        +++      GA+DS 
Sbjct: 1   MGQAFRRASGRIKASPSIDSAT----KPKIVVDHQPPVVGPTDVSKISRTVEHVGAIDSD 60

Query: 61  DVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNI 120
           D P  ++ N+LEERDP++DAMLSQM GRI SKPGGK+EMGEASVVERY RPMPKLR+T  
Sbjct: 61  DTPRINADNVLEERDPKYDAMLSQMAGRISSKPGGKVEMGEASVVERYNRPMPKLRNTKP 120

Query: 121 SSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQF 180
            S  YE+R  PPGTLNVAQ+R IILLH+GKADDH+GPM + QIA+++ V V Q++ I+QF
Sbjct: 121 DSGGYEERSVPPGTLNVAQLRHIILLHQGKADDHEGPMDIQQIAKKFRVDVVQVERIVQF 180

Query: 181 LSLPPEDSLRDK 186
           LS+PPEDS + K
Sbjct: 181 LSVPPEDSSKPK 188

[Close]

BLAST of CsGy6G014660 vs. TrEMBL
Match: tr|A0A2P5ES08|A0A2P5ES08_9ROSA (Dynein beta chain, ciliary protein OS=Trema orientalis OX=63057 GN=TorRG33x02_158890 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.1e-55
Identity = 115/194 (59.28%), Postives = 150/194 (77.32%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPP---PRVAEKARESG------ALD 60
           MGQAFRRA+GRI+  ++ D+T++ S K ++IVDRKPP   P + E+  ++G      A+D
Sbjct: 1   MGQAFRRASGRIRATTTTDATSSWS-KPKTIVDRKPPPVGPTIKEEISKAGDGEPGAAID 60

Query: 61  SGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDT 120
           S    A +  N+LEERDP +DAML QMVGRI +KPGGKLEMGEASVV+RY RP+PKLR+T
Sbjct: 61  SDGTMARNPDNVLEERDPNYDAMLGQMVGRITTKPGGKLEMGEASVVDRYKRPLPKLRNT 120

Query: 121 NISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTIL 180
              SS +EDRP P GTLN+AQ+R I+LLHEGKA+DHDGPM + QIAE+Y V VA++Q IL
Sbjct: 121 KPDSSSFEDRPTPSGTLNIAQLRHIVLLHEGKAEDHDGPMDVQQIAEKYRVDVAEVQRIL 180

Query: 181 QFLSLPPEDSLRDK 186
           QF+SLPPE+  +++
Sbjct: 181 QFISLPPEEEKKER 193

The following BLAST results are available for this feature:

BLAST of CsGy6G014660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657169.1	7.3e-99	100.00	PREDICTED: uncharacterized protein LOC101223121 [Cucumis sativus] >KGN47188.1 hy...	[more]
XP_008458465.1	8.4e-95	96.30	PREDICTED: uncharacterized protein LOC103497865 isoform X1 [Cucumis melo]	[more]
XP_023006464.1	7.9e-85	87.30	uncharacterized protein LOC111499180 [Cucurbita maxima]	[more]
XP_022958820.1	4.3e-83	86.24	uncharacterized protein LOC111459975 [Cucurbita moschata]	[more]
XP_023547640.1	2.1e-82	85.71	uncharacterized protein LOC111806523 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G014660 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G21400.1	1.7e-44	51.85	unknown protein	[more]

BLAST of CsGy6G014660 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy6G014660 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KCC5\|A0A0A0KCC5_CUCSA	4.9e-99	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G196710 PE=4 SV=1	[more]
tr\|A0A1S3C957\|A0A1S3C957_CUCME	5.6e-95	96.30	uncharacterized protein LOC103497865 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3C7E9\|A0A1S3C7E9_CUCME	1.3e-67	96.45	uncharacterized protein LOC103497865 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2N9IC80\|A0A2N9IC80_FAGSY	3.9e-56	59.90	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49363 PE=4 SV=1	[more]
tr\|A0A2P5ES08\|A0A2P5ES08_9ROSA	1.1e-55	59.28	Dynein beta chain, ciliary protein OS=Trema orientalis OX=63057 GN=TorRG33x02_15...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G014660.1	CsGy6G014660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..125
None	No IPR available	PANTHER	PTHR36759	FAMILY NOT NAMED	coord: 1..186

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G014660	Cla009314	Watermelon (97103) v1	cgybwmB506
CsGy6G014660	Csa6G196710	Cucumber (Chinese Long) v2	cgybcuB282
CsGy6G014660	MELO3C021343	Melon (DHL92) v3.5.1	cgybmeB386
CsGy6G014660	ClCG06G005230	Watermelon (Charleston Gray)	cgybwcgB440
CsGy6G014660	CSPI06G14810	Wild cucumber (PI 183967)	cgybcpiB288
CsGy6G014660	CmaCh08G012200	Cucurbita maxima (Rimu)	cgybcmaB875
CsGy6G014660	CmaCh17G003170	Cucurbita maxima (Rimu)	cgybcmaB765
CsGy6G014660	CmoCh17G003050	Cucurbita moschata (Rifu)	cgybcmoB747
CsGy6G014660	Lsi09G014180	Bottle gourd (USVL1VR-Ls)	cgyblsiB368
CsGy6G014660	Cp4.1LG17g00840	Cucurbita pepo (Zucchini)	cgybcpeB787
CsGy6G014660	Cp4.1LG12g02750	Cucurbita pepo (Zucchini)	cgybcpeB734
CsGy6G014660	MELO3C021343.2	Melon (DHL92) v3.6.1	cgybmedB387
CsGy6G014660	CsaV3_6G017270	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G014660	Cla97C06G114730	Watermelon (97103) v2	cgybwmbB448
CsGy6G014660	Bhi12G001841	Wax gourd	cgybwgoB514
CsGy6G014660	Carg05497	Silver-seed gourd	carcgybB0081
CsGy6G014660	Carg18835	Silver-seed gourd	carcgybB0703

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G014660	Watermelon (97103) v2	cgybwmbB445
CsGy6G014660	Wax gourd	cgybwgoB534
CsGy6G014660	Cucumber (Gy14) v2	cgybcgybB111
CsGy6G014660	Cucurbita maxima (Rimu)	cgybcmaB733
CsGy6G014660	Cucurbita maxima (Rimu)	cgybcmaB857
CsGy6G014660	Cucurbita moschata (Rifu)	cgybcmoB840
CsGy6G014660	Cucurbita moschata (Rifu)	cgybcmoB857
CsGy6G014660	Cucurbita pepo (Zucchini)	cgybcpeB833
CsGy6G014660	Cucurbita pepo (Zucchini)	cgybcpeB885
CsGy6G014660	Cucumber (Chinese Long) v2	cgybcuB268
CsGy6G014660	Bottle gourd (USVL1VR-Ls)	cgyblsiB433
CsGy6G014660	Melon (DHL92) v3.6.1	cgybmedB436
CsGy6G014660	Watermelon (97103) v1	cgybwmB466
CsGy6G014660	Cucumber (Chinese Long) v3	cgybcucB279