Cucsa.172190 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.172190
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Dynein beta chain, ciliary
Location	scaffold01196 : 108409 .. 111145 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGGATCGGCAACGTTCGCCcTCCTAACACTTTTtATTTtCTtCTTAGCCCCTCGAGTTTCGAACTCACTAAAATACGAGTCACGACTCACCCGATTCCTCATTTCATCTCCATCTCCTTTCCCCcTGAAAATTTCTCGTAAAACCCTCCGTCTCGTAGGGTTCTGATCAATTTTTGTACGAATCTGAACCTCTGATTCCAGTTCGTTTTGTGAGATCGTTGCTCTTTTTGAAGAAGGAAAGGATGGGACAGGCATTTCGTCGAGCAGCTGGAAGAATCAAACCGGCTTCGAGTATTGATTCCACTACCGCCTCTTCGTTGAAAATGGAAAGCATCGTCGATCGGAAGCCTCCGCCGCGTGTGGCCGAGAAGGCTCGGGAGAGTGGCGCTCTTGATTCCGGTAATTGTCATTTGTTAATCGTTTGTGGTGTCTTGAGAATTGAGACCGGAGATTCATGCACGAGGATTATTTATTTTTCTCTGTTTAGTTAAATGCAGTTTTGTAGAATTCGTATGTGTTGTTTATCATCCGATTTCGATAACGAGCTTCAGTTTTTTGGATAACTTCTTTTCCTTCTGCTTTCTCCTACTAGCTTTTGCTGTTATTGATTATCTTCCCTAGGTAATGTAGCGGCATTTCTCCATTAGGATCTGAATTTAAAAGTTCATTTACTATTGATCTGATCATTATCACTTAATTAACTGTTCTCCTTCCGTTTTTTtCTTGTTTCACGACTTCTGTCTTTCTGAACTGAAATATCTCCTGGTTACTGTTCATTATCGTCTATCTTTTTTCTTAGTGCATGATTTTGTAGAAGTAGAATTATGGACGAAGTTACTGTTGAATGTGAGCATTTCCTTCTGGTTACGGTTTTATGTGATCTTTTTtATCCTAAGCATTGAGTTCACTTGCTTATTAGATTGTGATTGTCTTCTTATATTATTTCTGTTAGTTGCATTTATGGAGACAAAGTTTAGAAGTTTTTTGTCCTCTGCTTCTATTGCGTATGTTTTTCGTCAGCTTCCGTTGATTTAGACTTCCGGTGTCTAAACATGTAAAAaGAAAAAAaCAGAGGCCATGAAAAAACTTCCAAATGATTTAGGCTTGCGTATGCTCTTTTTGTTTGATTCTCTTTCTTCGGTTGAGCCAAATGCAGCTCGACAGAATTCCTTTGAGATCTATATAATCGGATTTTGATAACGAGCTTGCTTTTTTTtGCATGTGAATTGCAAAACGTTGTCGAAAGTCACTTCAAAATCAGTGTGATGTGTTTTCTGCTGACAGGAATTGATTCATAGAATGCAATATAATCGAATGATAACCACTTTCTATTGTTCCCTCAGGTGATGTCCCGGCAAGTGATTCGGGAAACATGCTTGAAGAACGAGATCCCCAATTTGATGCCATGCTTAGCCAAATGGTGGGTCGGATAAAATCAAAGCCCGGAGGAAAACTTGAGATGGGGGAGGTAAGTTTCCATAAGAAACTGCCAAATTACTCTCAAAATTTTAGGCATTGAATATAATTTCAAGACTGCTTTTAACGGTTGAGTATGATCCGATGCTCGATTCCTTACTTCATTAGTAATCCTTATTGTAGGAATCTGGTGTGATCCTACTGATAACTTCATAAAGATTAATCTAAACTGTTAGCAAATAACTGATCACTTGGTAACTAGTCAATCTTTATCATCTATATCGAAACACTATTTAAATTTGTGATTTCGGAAGACTATAAGTTAATAGTCTTTGTCTTTAATTGTTAGGAGAAAAAAGTCCAAGCTACACACAATGGATAATTTTTTTtATAATAACTCCTTCAAAATCGTGATGGTACCTCACATCAGAAATATGGAGAATTATTTTTTTTtCTCTCTCTATATATATTGGTGAGGAGGCAAGTTTTATTATTTTATTTAGAAGAAAAATTTTCTGAGCCTCCTTGGTCTAAGTAAGTAATCTAGGCAAGGAGATTCCTCTTCTCTTTGGCTTTCTGGATAGTCTCTTGTATTTGTACATCTATCTATCTACACAAATTGATAATCATATGATCATTTGCAAAGACAATTGTAATATATATATCCATTGATGTGTGAGGTGACAATTGGCATTTTGTTCACTAAGTTATGCTCAAATGAGTTAATTACTTAGGACAGGTTTGAGAGTGGTTTAGAAATGGTTAATTTTTTTtAAAAAaTCAAAATCATATTTCATGTAATAAAATTTGCTTTGTAAAGTATAAAATTAGACTATTTCCAAAAAAAAaGAAGAAAAATTGTGATTAAAAGCACTTCAATGTTTTGTTTCAAACTCTTAATCAATGAAAAAGTTCTGTTAGACGAGTTTGGTTTTTGACATTTTAAAATCATTTCTAAATATGCCCCTACCATTTAAAAAAGTCCTAATGTGATAGTGATTTGTGATTTGATAAATGTAACAGGCCTCTGTGGTGGAGAGATACGGAAGACCAATGCCAAAGCTAAGAGATACAAATATAAGTTCAAGTAAATACGAGGATCGGCCAGCCCCACCAGGAACACTAAACGTAGCACAGATGCGACAAATAATTCTCTTACACGAAGGTAAGGCCGATGATCATGATGGGCCAATGGGACTTCACCAAATTGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAAACCATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTAGAGACAAAATCAAGGATTCTTAATTGAACAGG

mRNA sequence

TCGGATCGGCAACGTTCGCCCTCCTAACACTTTTTATTTTCTTCTTAGCCCCTCGAGTTTCGAACTCACTAAAATACGAGTCACGACTCACCCGATTCCTCATTTCATCTCCATCTCCTTTCCCCCTGAAAATTTCTCGTAAAACCCTCCGTCTCGTAGGGTTCTGATCAATTTTTGTACGAATCTGAACCTCTGATTCCAGTTCGTTTTGTGAGATCGTTGCTCTTTTTGAAGAAGGAAAGGATGGGACAGGCATTTCGTCGAGCAGCTGGAAGAATCAAACCGGCTTCGAGTATTGATTCCACTACCGCCTCTTCGTTGAAAATGGAAAGCATCGTCGATCGGAAGCCTCCGCCGCGTGTGGCCGAGAAGGCTCGGGAGAGTGGCGCTCTTGATTCCGGTGATGTCCCGGCAAGTGATTCGGGAAACATGCTTGAAGAACGAGATCCCCAATTTGATGCCATGCTTAGCCAAATGGTGGGTCGGATAAAATCAAAGCCCGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGATACGGAAGACCAATGCCAAAGCTAAGAGATACAAATATAAGTTCAAGTAAATACGAGGATCGGCCAGCCCCACCAGGAACACTAAACGTAGCACAGATGCGACAAATAATTCTCTTACACGAAGGTAAGGCCGATGATCATGATGGGCCAATGGGACTTCACCAAATTGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAAACCATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTAGAGACAAAATCAAGGATTCTTAATTGAACAGG

Coding sequence (CDS)

ATGGGACAGGCATTTCGTCGAGCAGCTGGAAGAATCAAACCGGCTTCGAGTATTGATTCCACTACCGCCTCTTCGTTGAAAATGGAAAGCATCGTCGATCGGAAGCCTCCGCCGCGTGTGGCCGAGAAGGCTCGGGAGAGTGGCGCTCTTGATTCCGGTGATGTCCCGGCAAGTGATTCGGGAAACATGCTTGAAGAACGAGATCCCCAATTTGATGCCATGCTTAGCCAAATGGTGGGTCGGATAAAATCAAAGCCCGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGATACGGAAGACCAATGCCAAAGCTAAGAGATACAAATATAAGTTCAAGTAAATACGAGGATCGGCCAGCCCCACCAGGAACACTAAACGTAGCACAGATGCGACAAATAATTCTCTTACACGAAGGTAAGGCCGATGATCATGATGGGCCAATGGGACTTCACCAAATTGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAAACCATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTAGAGACAAAATCAAGGATTCTTAA

Protein sequence

MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS*

Homology

[Close]

BLAST of Cucsa.172190 vs. TrEMBL
Match: A0A0A0KCC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G196710 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 2.4e-100
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60
           MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS
Sbjct: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60

Query: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120
           GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED
Sbjct: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120

Query: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180
           RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED
Sbjct: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180

Query: 181 SLRDKIKDS 190
           SLRDKIKDS
Sbjct: 181 SLRDKIKDS 189

[Close]

BLAST of Cucsa.172190 vs. TrEMBL
Match: V7B355_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G246800g PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.1e-56
Identity = 120/192 (62.50%), Postives = 143/192 (74.48%), Query Frame = 1


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVA-------EKARESGALDSG 60
           MGQAFRRA+GRI+ AS  D  T+S  K ++ VDR+PPP VA        K+ E   L + 
Sbjct: 1   MGQAFRRASGRIRAASEAD--TSSFSKPKTAVDRRPPPTVAPDKTAQISKSAEQDVLHAD 60

Query: 61  DVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNI 120
           D    ++ N+LEERDP+FDAML QMVGRIKSKPGGK EMGEA VVE+Y RPMPKLR+T  
Sbjct: 61  DRSRVNTDNILEERDPKFDAMLGQMVGRIKSKPGGKPEMGEAFVVEKYNRPMPKLRNTKP 120

Query: 121 SSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQF 180
            S +YE+R  P GTLNVAQ+R IILLHEGKADD++G M  HQIAE++ VSV QI+ ILQF
Sbjct: 121 DSGRYEERQVPSGTLNVAQLRHIILLHEGKADDYNGRMNAHQIAEKFQVSVVQIERILQF 180

Query: 181 LSLPPEDSLRDK 186
           LS PPEDS +DK
Sbjct: 181 LSQPPEDSSKDK 190

[Close]

BLAST of Cucsa.172190 vs. TrEMBL
Match: A0A072VGI4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g436940 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.8e-56
Identity = 119/196 (60.71%), Postives = 148/196 (75.51%), Query Frame = 1


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVA-EKARESG--------ALD 60
           MGQAFRRA+GRI+ AS  D+++ S  K+ ++  R PPP+VA +KA +S         +L+
Sbjct: 1   MGQAFRRASGRIRAASETDTSSLSKPKI-AVDHRPPPPKVATDKAADSSKTVKGVEDSLN 60

Query: 61  SGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDT 120
             D P+++  N+LEE+DP+FDAML QM+GRI SKPGGK EMGEASVVE+Y RPMPKLR+T
Sbjct: 61  DDDRPSANLDNVLEEKDPKFDAMLGQMLGRITSKPGGKREMGEASVVEKYNRPMPKLRNT 120

Query: 121 NISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTIL 180
             +S  YE+RP P GTLNVAQ+R IILLHEGKADDH+GPM +HQIAE++ V V QIQ IL
Sbjct: 121 KPNSGHYEERPVPAGTLNVAQLRHIILLHEGKADDHNGPMDVHQIAEKFRVDVGQIQKIL 180

Query: 181 QFLSLPPEDSLRDKIK 188
           QFLS PPE    DK K
Sbjct: 181 QFLSHPPEGRSEDKNK 195

[Close]

BLAST of Cucsa.172190 vs. TrEMBL
Match: A0A0B2QLS2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_037403 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.6e-56
Identity = 120/194 (61.86%), Postives = 144/194 (74.23%), Query Frame = 1


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAE-------KARESGALDSG 60
           MGQAFRRA+GRI+ AS  D  T+S  K ++ VDR+PPP  A        KA E   L + 
Sbjct: 1   MGQAFRRASGRIRAASEAD--TSSFSKSKTAVDRQPPPNAAADKAAQIPKAAEQDVLHTD 60

Query: 61  DVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNI 120
           D P  ++ N+LEERDP+FDAML QMVGRI SKPGGK EMGEA VVE++ RPMPKLR+T  
Sbjct: 61  DRPRVNTDNILEERDPKFDAMLGQMVGRITSKPGGKPEMGEAFVVEKFNRPMPKLRNTKP 120

Query: 121 SSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQF 180
              + E+RP P GTLNVAQ+R IILLHEGKADD++G M  HQIAE++ V+V QIQTILQF
Sbjct: 121 DFGRNEERPVPAGTLNVAQLRHIILLHEGKADDYNGRMDAHQIAEKFRVNVVQIQTILQF 180

Query: 181 LSLPPEDSLRDKIK 188
           LSLPPE+S +DK K
Sbjct: 181 LSLPPENSSKDKNK 192

[Close]

BLAST of Cucsa.172190 vs. TrEMBL
Match: C6T5G1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G153100 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.6e-56
Identity = 120/194 (61.86%), Postives = 144/194 (74.23%), Query Frame = 1


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAE-------KARESGALDSG 60
           MGQAFRRA+GRI+ AS  D  T+S  K ++ VDR+PPP  A        KA E   L + 
Sbjct: 1   MGQAFRRASGRIRAASEAD--TSSFSKSKTAVDRQPPPNAAADKAAQIPKAAEQDVLHTD 60

Query: 61  DVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNI 120
           D P  ++ N+LEERDP+FDAML QMVGRI SKPGGK EMGEA VVE++ RPMPKLR+T  
Sbjct: 61  DRPRVNTDNILEERDPKFDAMLGQMVGRITSKPGGKPEMGEAFVVEKFNRPMPKLRNTKP 120

Query: 121 SSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQF 180
              + E+RP P GTLNVAQ+R IILLHEGKADD++G M  HQIAE++ V+V QIQTILQF
Sbjct: 121 DFGRNEERPVPAGTLNVAQLRHIILLHEGKADDYNGRMDAHQIAEKFRVNVVQIQTILQF 180

Query: 181 LSLPPEDSLRDKIK 188
           LSLPPE+S +DK K
Sbjct: 181 LSLPPENSSKDKNK 192

[Close]

BLAST of Cucsa.172190 vs. TAIR10
Match: AT3G21400.1 (AT3G21400.1 unknown protein)

HSP 1 Score: 179.5 bits (454), Expect = 2.0e-45
Identity = 100/191 (52.36%), Postives = 126/191 (65.97%), Query Frame = 1


Query: 1   MGQAFRRAAGRIKPASSIDSTTAS----SLKMESIVDRKPPPRVAEKARESGALDSGDVP 60
           MGQ  RRA G+IK       +  S    SL  E +   K  P  A      G  D G   
Sbjct: 1   MGQQLRRAVGKIKEVERSSPSRVSIDRRSLPTEELSAVKSSPSTAAV---DGVSDKGRRT 60

Query: 61  ASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSS 120
           + D  N+LEERDP++D ML+QMVGRIK+KPGGK EMGEASVVE   RP+PKLR+T   S+
Sbjct: 61  SED--NVLEERDPKYDTMLNQMVGRIKAKPGGKAEMGEASVVETSKRPLPKLRNTTPEST 120

Query: 121 KYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSL 180
           +YE+ P P GTLNVAQ+R I+LL +GK+ DH GPMG+++IAE+Y + V+Q+Q I QFLSL
Sbjct: 121 RYEENPVPQGTLNVAQVRHIMLLFQGKSQDHHGPMGVNEIAEKYRIDVSQVQKITQFLSL 180

Query: 181 PPEDSLRDKIK 188
           P E  + DK K
Sbjct: 181 PQE--ITDKQK 184

[Close]

BLAST of Cucsa.172190 vs. NCBI nr
Match: gi|778714015|ref|XP_011657169.1| (PREDICTED: uncharacterized protein LOC101223121 [Cucumis sativus])

HSP 1 Score: 372.9 bits (956), Expect = 3.4e-100
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60
           MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS
Sbjct: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60

Query: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120
           GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED
Sbjct: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120

Query: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180
           RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED
Sbjct: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180

Query: 181 SLRDKIKDS 190
           SLRDKIKDS
Sbjct: 181 SLRDKIKDS 189

[Close]

BLAST of Cucsa.172190 vs. NCBI nr
Match: gi|659117182|ref|XP_008458465.1| (PREDICTED: uncharacterized protein LOC103497865 isoform X1 [Cucumis melo])

HSP 1 Score: 359.4 bits (921), Expect = 3.9e-96
Identity = 182/189 (96.30%), Postives = 184/189 (97.35%), Query Frame = 1


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60
           MGQAFRRAAGRIKPASS+DSTTASSLKMESIVDRKPPPRVAEKARESG+LDSGDV ASDS
Sbjct: 1   MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDS 60

Query: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120
           GN LEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNI SSKYED
Sbjct: 61  GNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNIKSSKYED 120

Query: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180
           RPAPPGTLNVAQMRQIILLHEGKADDHDGPMG HQIAERYNVSVAQIQTILQFLSLPPED
Sbjct: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPED 180

Query: 181 SLRDKIKDS 190
           SLRDKI DS
Sbjct: 181 SLRDKITDS 189

[Close]

BLAST of Cucsa.172190 vs. NCBI nr
Match: gi|659117184|ref|XP_008458466.1| (PREDICTED: uncharacterized protein LOC103497865 isoform X2 [Cucumis melo])

HSP 1 Score: 269.2 bits (687), Expect = 5.3e-69
Identity = 136/141 (96.45%), Postives = 138/141 (97.87%), Query Frame = 1


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60
           MGQAFRRAAGRIKPASS+DSTTASSLKMESIVDRKPPPRVAEKARESG+LDSGDV ASDS
Sbjct: 1   MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDS 60

Query: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120
           GN LEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNI SSKYED
Sbjct: 61  GNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNIKSSKYED 120

Query: 121 RPAPPGTLNVAQMRQIILLHE 142
           RPAPPGTLNVAQMRQIILLHE
Sbjct: 121 RPAPPGTLNVAQMRQIILLHE 141

[Close]

BLAST of Cucsa.172190 vs. NCBI nr
Match: gi|593330941|ref|XP_007138897.1| (hypothetical protein PHAVU_009G246800g [Phaseolus vulgaris])

HSP 1 Score: 226.9 bits (577), Expect = 3.0e-56
Identity = 120/192 (62.50%), Postives = 143/192 (74.48%), Query Frame = 1


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVA-------EKARESGALDSG 60
           MGQAFRRA+GRI+ AS  D  T+S  K ++ VDR+PPP VA        K+ E   L + 
Sbjct: 1   MGQAFRRASGRIRAASEAD--TSSFSKPKTAVDRRPPPTVAPDKTAQISKSAEQDVLHAD 60

Query: 61  DVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNI 120
           D    ++ N+LEERDP+FDAML QMVGRIKSKPGGK EMGEA VVE+Y RPMPKLR+T  
Sbjct: 61  DRSRVNTDNILEERDPKFDAMLGQMVGRIKSKPGGKPEMGEAFVVEKYNRPMPKLRNTKP 120

Query: 121 SSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQF 180
            S +YE+R  P GTLNVAQ+R IILLHEGKADD++G M  HQIAE++ VSV QI+ ILQF
Sbjct: 121 DSGRYEERQVPSGTLNVAQLRHIILLHEGKADDYNGRMNAHQIAEKFQVSVVQIERILQF 180

Query: 181 LSLPPEDSLRDK 186
           LS PPEDS +DK
Sbjct: 181 LSQPPEDSSKDK 190

[Close]

BLAST of Cucsa.172190 vs. NCBI nr
Match: gi|922389680|ref|XP_013463263.1| (hypothetical protein MTR_2g436940 [Medicago truncatula])

HSP 1 Score: 226.5 bits (576), Expect = 4.0e-56
Identity = 119/196 (60.71%), Postives = 148/196 (75.51%), Query Frame = 1


Query: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVA-EKARESG--------ALD 60
           MGQAFRRA+GRI+ AS  D+++ S  K+ ++  R PPP+VA +KA +S         +L+
Sbjct: 1   MGQAFRRASGRIRAASETDTSSLSKPKI-AVDHRPPPPKVATDKAADSSKTVKGVEDSLN 60

Query: 61  SGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDT 120
             D P+++  N+LEE+DP+FDAML QM+GRI SKPGGK EMGEASVVE+Y RPMPKLR+T
Sbjct: 61  DDDRPSANLDNVLEEKDPKFDAMLGQMLGRITSKPGGKREMGEASVVEKYNRPMPKLRNT 120

Query: 121 NISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTIL 180
             +S  YE+RP P GTLNVAQ+R IILLHEGKADDH+GPM +HQIAE++ V V QIQ IL
Sbjct: 121 KPNSGHYEERPVPAGTLNVAQLRHIILLHEGKADDHNGPMDVHQIAEKFRVDVGQIQKIL 180

Query: 181 QFLSLPPEDSLRDKIK 188
           QFLS PPE    DK K
Sbjct: 181 QFLSHPPEGRSEDKNK 195

The following BLAST results are available for this feature:

BLAST of Cucsa.172190 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCC5_CUCSA	2.4e-100	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G196710 PE=4 SV=1	[more]
V7B355_PHAVU	2.1e-56	62.50	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G246800g PE=4 SV=1	[more]
A0A072VGI4_MEDTR	2.8e-56	60.71	Uncharacterized protein OS=Medicago truncatula GN=MTR_2g436940 PE=4 SV=1	[more]
A0A0B2QLS2_GLYSO	3.6e-56	61.86	Uncharacterized protein OS=Glycine soja GN=glysoja_037403 PE=4 SV=1	[more]
C6T5G1_SOYBN	3.6e-56	61.86	Uncharacterized protein OS=Glycine max GN=GLYMA_15G153100 PE=2 SV=1	[more]

BLAST of Cucsa.172190 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G21400.1	2.0e-45	52.36	unknown protein	[more]

BLAST of Cucsa.172190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778714015\|ref\|XP_011657169.1\|	3.4e-100	100.00	PREDICTED: uncharacterized protein LOC101223121 [Cucumis sativus]	[more]
gi\|659117182\|ref\|XP_008458465.1\|	3.9e-96	96.30	PREDICTED: uncharacterized protein LOC103497865 isoform X1 [Cucumis melo]	[more]
gi\|659117184\|ref\|XP_008458466.1\|	5.3e-69	96.45	PREDICTED: uncharacterized protein LOC103497865 isoform X2 [Cucumis melo]	[more]
gi\|593330941\|ref\|XP_007138897.1\|	3.0e-56	62.50	hypothetical protein PHAVU_009G246800g [Phaseolus vulgaris]	[more]
gi\|922389680\|ref\|XP_013463263.1\|	4.0e-56	60.71	hypothetical protein MTR_2g436940 [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.172190.1	Cucsa.172190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36759	FAMILY NOT NAMED	coord: 2..189 score: 2.5
None	No IPR available	PANTHER	PTHR36759:SF1	GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MHC9	coord: 2..189 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.172190	Cla009314	Watermelon (97103) v1	cgywmB329
Cucsa.172190	Csa6G196710	Cucumber (Chinese Long) v2	cgycuB262
Cucsa.172190	MELO3C021343	Melon (DHL92) v3.5.1	cgymeB305
Cucsa.172190	ClCG06G005230	Watermelon (Charleston Gray)	cgywcgB307
Cucsa.172190	CSPI06G14810	Wild cucumber (PI 183967)	cgycpiB270
Cucsa.172190	CmaCh17G003170	Cucurbita maxima (Rimu)	cgycmaB0485
Cucsa.172190	CmaCh08G012200	Cucurbita maxima (Rimu)	cgycmaB0489
Cucsa.172190	CmoCh17G003050	Cucurbita moschata (Rifu)	cgycmoB0488
Cucsa.172190	Lsi09G014180	Bottle gourd (USVL1VR-Ls)	cgylsiB285
Cucsa.172190	Cp4.1LG12g02750	Cucurbita pepo (Zucchini)	cgycpeB0472
Cucsa.172190	Cp4.1LG17g00840	Cucurbita pepo (Zucchini)	cgycpeB0474
Cucsa.172190	MELO3C021343.2	Melon (DHL92) v3.6.1	cgymedB297
Cucsa.172190	CsaV3_6G017270	Cucumber (Chinese Long) v3	cgycucB275
Cucsa.172190	Cla97C06G114730	Watermelon (97103) v2	cgywmbB312
Cucsa.172190	Bhi12G001841	Wax gourd	cgywgoB352
Cucsa.172190	Carg05497	Silver-seed gourd	carcgyB0079
Cucsa.172190	Carg18835	Silver-seed gourd	carcgyB0786

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.172190	Bottle gourd (USVL1VR-Ls)	cgylsiB287
Cucsa.172190	Melon (DHL92) v3.6.1	cgymedB299
Cucsa.172190	Cucumber (Chinese Long) v3	cgycucB274
Cucsa.172190	Watermelon (97103) v2	cgywmbB311
Cucsa.172190	Wax gourd	cgywgoB353
Cucsa.172190	Cucumber (Gy14) v1	cgycgyB108
Cucsa.172190	Cucurbita maxima (Rimu)	cgycmaB0488
Cucsa.172190	Cucurbita moschata (Rifu)	cgycmoB0491
Cucsa.172190	Wild cucumber (PI 183967)	cgycpiB269
Cucsa.172190	Cucumber (Chinese Long) v2	cgycuB261
Cucsa.172190	Melon (DHL92) v3.5.1	cgymeB307
Cucsa.172190	Watermelon (97103) v1	cgywmB327