CmaCh08G003550 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh08G003550
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing family protein
LocationCma_Chr08 : 2039744 .. 2044406 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATTTCAAAACTTGGTATCTGATAGCCACGATGCACCGTTCTTCAAGGCTATATCTAGCGACGGCCGCCCGCCGATTTTCCGGCGAAGCCTACGCGGCGGCGGTGGAGAACACTAAACTAGAAGCCGCCTCCGGAAGCTCTGGCACAAGCGGTGGTGGTCGAGACACGCTAGGGCGAAGGCTTATGAGCCTCGCTTTCCCCAAACGTAGCGCCGTGATTGCCATTCGGAAATGGCAAGAAGAAGGCCACACTGTTCGCAAGTACGAGCTCAATCGTATCGTTCGGGAGCTTCGCAAGCTCAAGCGCTACAAGCACGCACTCGAGGTATTCGATTCCCTTTTTCCTTCTTTTGTAGAACATATGTAGCGTATTTTTTCTACGAGATCATGCATTCATAGGCCTGAATGAACTTGTCTTCTACTTGTGCTATGAACTTTTACTCGGACGAATTAGAGTCGATTCAATTCATCTGATGTATGAGTTGCTCGTCATATCTAGCTTCAGCTTCCAAGAGTGTATCTGATGATATTAATTTAGAGGCCGAGAAATTAGGTTGAACTTGTTAATATATTATCTAACACTTGGAGGGATAGGAAATTAGCTAAAGATTCCGTAATATGAAGCTGAAGAAATGGTTGCAAAAATGATATTACTGCGATTGGCAGGGCTCACTGCTCTAATTCTAGATTAAATCAAGATTATCCAAAAGCTCAGGTCGATAGATTATGTTGAATTTAGAGGTGCTGAATTATAATTCCCTGACCTGGCTTTTTACTTTTTGTTCATAATCTCAAATGAATCAGGAAGATAGTCTCAAGTAATCTATCTGGAACTTTTCCACTGTGCAGATATGTGAATGGATGACTTTACAGAAAAATATGAAGCTACTACCTGGTGATTATGCAGTTCATCTGGATTTGATTTCAAAAATCCGTGGCCTGAGTAGTGCAGAAAAGTTTTTTATGGATCTACCTGATAAAATGAGAGGTCAATCTGCATATACATCTCTTCTTCATGTGTTTGTACAAAATAATCTATCTGAAAAAGCTGAGGCTCTAATGGCGAAAATGTCCGAATTTGGTTTCTTGAAAAGTCCTCTTTCTTTCAACCACATGCTATCTCTTCACATCACGAACAAGCGACTAGAGAAGGTTCCTGCTCTGGTTCAAGAATTAAAGAAGAACACCAAACCAGATGTGGTAACATACAATCTTTTGTTGAATGTTTGCACTTTGCAAAATGATGTTGAAGCTGCAGAAAACATTTTCCTCGAGATGAAGAACGCAAAGATCGAACCAGATTGGGTATCGTTCAGCACATTAGCTAACTTGTATTCCAAACAACAACTTACTGAAAAAGCAGCATCTACTTTGAAGAAGATGGAGAAAATGGCATCTAAACGAAACAGAATTTCGTTTTCATCGCTTCTTAGCTTATATACCAATTTGGGGGATAAGGATGGAGTTTGCAGGATATGGAAAAAGATGAACTCATCCTTTCGCAAGATGAATGATAGCGAGTATATGTGCATGATATCATCTCTTGTGAAACTTGACAAGCTCGAGGATGCTGAGAAACTCTACACCGAATGGGAGTCGGTTTCTGGGACGGGTGATACTCGTGTTCCAAATATATTGCTAGCAGCGTATATCAACAAAAACCAAATGAAACAAGCTGAGAGTTTCTATGATCGGATGACGCTTAAAGGAATCATACCATCTTACACTACTTGGGAGCTCCTCACATGGGGTTATCTGAAAGAGAATCAGATGGAGAAAGTGCTGCAGTTCTTCAAGAATGCTGTTGGCAGTGTGAAGAAATGGAACGCGGATGAGAGGCTGGTTAAAGGAGTGTGTAAGCGACTCGAAGAGCAGGGTAACTTCGAAGGGACGGAGCAGCTGTTGATTATTCTTAGGAATGCTGGTCATGTGGATACTGAGATATACAATTCTCTGTTGCGGACCTATGCGAAAGCTGGTAAAATGCCACTCATAGTTGCTGAAAGAATGGAACAGGACAATGTTCAGTTGAATGAAGAGTCTCGTGAGCTTCTAAAGTTGACCACCAAGATGTGTGTGAGTGAAGTTTCAAGCACTTTTTACCACGAAGCCCAAAAAACCAACGAAACTGATCAAACAAACTCGACTCAATCGGTTTGAAATACACTCTTAAGTTGGTTCGACAATAGCTTACCAGTTTCACTTTCATAGAATTCGTTTTTCAGTGTTTCAATTCAATCCTTAGAATTTAAGTTTAGTTTCAATTGGGTCCTATAATTCAGTTTAGTTTCAACTGGGTCCCTATAAATTGAGCTTAGTTTCAATTGGTCCGAATAGTTTGAGCTTAGTATCAATTTGGTCCCTTTAATTTTAAAACATCGGAACATTTCTTTGGTTTATGCTAGTTTTCATTATAGACGAGAGTATAACTTAGATGTTAAGTTAATATACTATTAATCTCATGGTTAGATGTTCAAATTCCTATCTCTATATGTTGAATTAAAAAAAACGTACTTAATTTTCATTTGATTTCCTATGATTTAATTAAATCTTATAAATGTTTCTAAATTACGATATACCCATTTTGAAAATTTGTGTATTTTCTTTTATATTTTACTAACTATAAATCCAAATAGAATAATATTAAATTAGAAGGTTCAAAATTGCATAGATTAATATTTTATTTTATTTTTTAAACCACACGATTTAATTTTGTAGATATTATTTCCACCGAAAATTGGAATAAAAAGAGAATAAAAATAAAAGTAGGCAGACGTGAAGGGGCAATTACGGAAACTAAAAGAATAATAAGGGTATAATTGAAATATCAATAATCAAACAGGTTAAAAACGAGAAATTTCCGAATATAAATACAGGCCGTTTATCACTCTTCCAAAACCCTAGAGTTTGAGAAAGGCGGAAGCCCTAGTTCAGCAATCGGAGCTTTTGCCGGCCTTTGCTTACTGAATTCAACAGCCATGGCTACTGCTAGGACCGTCAAGGATGTCTCTCCTCACGAGTTTGTCAAGGCCTATGCCGCTCATCTGAAGCGGTCTGGAAAGGTATCCATTTTGTTTCTCTATTTGGCATTTTGTTTATTTCGTGGCTTATAAAACTTGATTCTCGATTTAAAAGAGTATTCTGGGATATCGATTTCGTGAACTATGTGAATGCTGAATTTGAAGTTCAAATATTTCCGGCTCTCTCGTGGAGTGTGCTTGATTCTGCATTGTTTCCCTTCTTTCTTTGCTTATCTTAGCCTCCATTGTACTTCTCCTCTTTGTTTTTATCAATTATACAAGCGTTTTGCAGGTTTTGGGATGTAGACGCTTCGATTGATCGCTTCTGATTTTTGTTTTCTTTTTAACCTTTATAGGCTGTTAGATTATCTGCTCGTGCATTGAATATGCCTCTTCTGTGAATAATTTGTGGGTTGTGACTGTTTCTTGGATCCTATGCAATTTAGACATGTTTTCACTTTAGGATTCCTAATGTTCGACTGCGCTAACTAGTCTATATGATTTTTCGGCCATAAGTTCGAATTTGATACTATCCACGAATGCTTCCTATGGAAAAGAACATTTTATGGAAGTCGTTTTTCGAACTCCCTGTTTTGGATTATCCGTTTTAGTTCCCCATGTTACGATACTTCACTGGTTAATCGAATGTGGTCTATGTGGCTTACAATTCTTATACAATGCATAATTACGAGCAGGTTGAGCTTCCACCATGGACCGACATTGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCTGACTGGTATTACGTGAGAGCTGGTTAGTTCCCTCTTTTCCTGTTTTTGACTTCCATGTGTTCGTATGAAATGAACAAAACCAACATAAAGCAATTGTTTTATATTGTGTTTTCTTTTGATCACTTTTTCCAAATTATGCAGCATCCATGGCAAGGAAGATCTACTTGAGGGGAGGTCTTGGTGTTGGAGCATTCAAGAGGATTTATGGTGGAAGCAAGAGGAATGGTAGTCGTCCTCCACACTTCTGCGAAAGCAGTGGTGCCATCGCCCGTCACATTTTACAACAATTGCAGGAGATGAACATTGTTGATGTTGACCCAAAGGGGTGAGTACAAAGATCCTCATAATTAGCTTAGTGATTATAACTTCTATACTGCCTGTTATTATATGTTGTGATTTACCCTGGTTTCGAGTCATATGTTACAACATTATTATTATCTATTGATCTCCTTTTCTATCTGGATGGGTTTGCAGTGGAAGGAGAATTACTTCGAGCGGACGACGGGATCTTGATCAAGTCGCTGGCCGGATTGTTGTTGCCCCTTGATCAATCAATTCATGTTTTGTCAATTAGAGACCTTATGTTTTGCCTGATGAGATACAATTTCTTATTCGCCATTAAAATTTTGGATTGTGCTGTTGAAAGATCTCCAGATGGTTTTGAATGGTCTAAAGTTCATTTACAATTCCTTTTGTTATATTTTTTCTGGGTTTTTTGCATGAAAGATGTTTCTAATGTTTTATCAACAATAACTTTGATGCTTAGCCTACGAAGTTCTAGCATGGAGATTATGTCATTCTTCTTTGTTTGGTGATCTGTTCTAAAGTGAACAATGTTTGGTTGGATCGTATTTTCATAACTGGACGAGTATTTGAAAA

mRNA sequence

TCATTTCAAAACTTGGTATCTGATAGCCACGATGCACCGTTCTTCAAGGCTATATCTAGCGACGGCCGCCCGCCGATTTTCCGGCGAAGCCTACGCGGCGGCGGTGGAGAACACTAAACTAGAAGCCGCCTCCGGAAGCTCTGGCACAAGCGGTGGTGGTCGAGACACGCTAGGGCGAAGGCTTATGAGCCTCGCTTTCCCCAAACGTAGCGCCGTGATTGCCATTCGGAAATGGCAAGAAGAAGGCCACACTGTTCGCAAGTACGAGCTCAATCGTATCGTTCGGGAGCTTCGCAAGCTCAAGCGCTACAAGCACGCACTCGAGATATGTGAATGGATGACTTTACAGAAAAATATGAAGCTACTACCTGGTGATTATGCAGTTCATCTGGATTTGATTTCAAAAATCCGTGGCCTGAGTAGTGCAGAAAAGTTTTTTATGGATCTACCTGATAAAATGAGAGGTCAATCTGCATATACATCTCTTCTTCATGTGTTTGTACAAAATAATCTATCTGAAAAAGCTGAGGCTCTAATGGCGAAAATGTCCGAATTTGGTTTCTTGAAAAGTCCTCTTTCTTTCAACCACATGCTATCTCTTCACATCACGAACAAGCGACTAGAGAAGGTTCCTGCTCTGGTTCAAGAATTAAAGAAGAACACCAAACCAGATGTGGTAACATACAATCTTTTGTTGAATGTTTGCACTTTGCAAAATGATGTTGAAGCTGCAGAAAACATTTTCCTCGAGATGAAGAACGCAAAGATCGAACCAGATTGGGTATCGTTCAGCACATTAGCTAACTTGTATTCCAAACAACAACTTACTGAAAAAGCAGCATCTACTTTGAAGAAGATGGAGAAAATGGCATCTAAACGAAACAGAATTTCGTTTTCATCGCTTCTTAGCTTATATACCAATTTGGGGGATAAGGATGGAGTTTGCAGGATATGGAAAAAGATGAACTCATCCTTTCGCAAGATGAATGATAGCGAGTATATGTGCATGATATCATCTCTTGTGAAACTTGACAAGCTCGAGGATGCTGAGAAACTCTACACCGAATGGGAGTCGGTTTCTGGGACGGGTGATACTCGTGTTCCAAATATATTGCTAGCAGCGTATATCAACAAAAACCAAATGAAACAAGCTGAGAGTTTCTATGATCGGATGACGCTTAAAGGAATCATACCATCTTACACTACTTGGGAGCTCCTCACATGGGGTTATCTGAAAGAGAATCAGATGGAGAAAGTGCTGCAGTTCTTCAAGAATGCTGTTGGCAGTGTGAAGAAATGGAACGCGGATGAGAGGCTGGTTAAAGGAGTGTGTAAGCGACTCGAAGAGCAGGGTAACTTCGAAGGGACGGAGCAGCTGTTGATTATTCTTAGGAATGCTGGTCATGTGGATACTGAGATATACAATTCTCTGTTGCGGACCTATGCGAAAGCTGGTAAAATGCCACTCATAGTTGCTGAAAGAATGGAACAGGACAATGTTCAGTTGAATGAAGAGTCTCGTGAGCTTCTAAAGTTGACCACCAAGATGTGTGTGAGTGAAGTTTCAAGCACTTTTTACCACGAAGCCCAAAAAACCAACGAAACTGATCAAACAAACTCGACTCAATCGGCCGTTTATCACTCTTCCAAAACCCTAGAGTTTGAGAAAGGCGGAAGCCCTAGTTCAGCAATCGGAGCTTTTGCCGGCCTTTGCTTACTGAATTCAACAGCCATGGCTACTGCTAGGACCGTCAAGGATGTCTCTCCTCACGAGTTTGTCAAGGCCTATGCCGCTCATCTGAAGCGGTCTGGAAAGGTTGAGCTTCCACCATGGACCGACATTGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCTGACTGGTATTACGTGAGAGCTGCATCCATGGCAAGGAAGATCTACTTGAGGGGAGGTCTTGGTGTTGGAGCATTCAAGAGGATTTATGGTGGAAGCAAGAGGAATGGTAGTCGTCCTCCACACTTCTGCGAAAGCAGTGGTGCCATCGCCCGTCACATTTTACAACAATTGCAGGAGATGAACATTGTTGATGTTGACCCAAAGGGTGGAAGGAGAATTACTTCGAGCGGACGACGGGATCTTGATCAAGTCGCTGGCCGGATTGTTGTTGCCCCTTGATCAATCAATTCATGTTTTGTCAATTAGAGACCTTATGTTTTGCCTGATGAGATACAATTTCTTATTCGCCATTAAAATTTTGGATTGTGCTGTTGAAAGATCTCCAGATGGTTTTGAATGGTCTAAAGTTCATTTACAATTCCTTTTGTTATATTTTTTCTGGGTTTTTTGCATGAAAGATGTTTCTAATGTTTTATCAACAATAACTTTGATGCTTAGCCTACGAAGTTCTAGCATGGAGATTATGTCATTCTTCTTTGTTTGGTGATCTGTTCTAAAGTGAACAATGTTTGGTTGGATCGTATTTTCATAACTGGACGAGTATTTGAAAA

Coding sequence (CDS)

ATGCACCGTTCTTCAAGGCTATATCTAGCGACGGCCGCCCGCCGATTTTCCGGCGAAGCCTACGCGGCGGCGGTGGAGAACACTAAACTAGAAGCCGCCTCCGGAAGCTCTGGCACAAGCGGTGGTGGTCGAGACACGCTAGGGCGAAGGCTTATGAGCCTCGCTTTCCCCAAACGTAGCGCCGTGATTGCCATTCGGAAATGGCAAGAAGAAGGCCACACTGTTCGCAAGTACGAGCTCAATCGTATCGTTCGGGAGCTTCGCAAGCTCAAGCGCTACAAGCACGCACTCGAGATATGTGAATGGATGACTTTACAGAAAAATATGAAGCTACTACCTGGTGATTATGCAGTTCATCTGGATTTGATTTCAAAAATCCGTGGCCTGAGTAGTGCAGAAAAGTTTTTTATGGATCTACCTGATAAAATGAGAGGTCAATCTGCATATACATCTCTTCTTCATGTGTTTGTACAAAATAATCTATCTGAAAAAGCTGAGGCTCTAATGGCGAAAATGTCCGAATTTGGTTTCTTGAAAAGTCCTCTTTCTTTCAACCACATGCTATCTCTTCACATCACGAACAAGCGACTAGAGAAGGTTCCTGCTCTGGTTCAAGAATTAAAGAAGAACACCAAACCAGATGTGGTAACATACAATCTTTTGTTGAATGTTTGCACTTTGCAAAATGATGTTGAAGCTGCAGAAAACATTTTCCTCGAGATGAAGAACGCAAAGATCGAACCAGATTGGGTATCGTTCAGCACATTAGCTAACTTGTATTCCAAACAACAACTTACTGAAAAAGCAGCATCTACTTTGAAGAAGATGGAGAAAATGGCATCTAAACGAAACAGAATTTCGTTTTCATCGCTTCTTAGCTTATATACCAATTTGGGGGATAAGGATGGAGTTTGCAGGATATGGAAAAAGATGAACTCATCCTTTCGCAAGATGAATGATAGCGAGTATATGTGCATGATATCATCTCTTGTGAAACTTGACAAGCTCGAGGATGCTGAGAAACTCTACACCGAATGGGAGTCGGTTTCTGGGACGGGTGATACTCGTGTTCCAAATATATTGCTAGCAGCGTATATCAACAAAAACCAAATGAAACAAGCTGAGAGTTTCTATGATCGGATGACGCTTAAAGGAATCATACCATCTTACACTACTTGGGAGCTCCTCACATGGGGTTATCTGAAAGAGAATCAGATGGAGAAAGTGCTGCAGTTCTTCAAGAATGCTGTTGGCAGTGTGAAGAAATGGAACGCGGATGAGAGGCTGGTTAAAGGAGTGTGTAAGCGACTCGAAGAGCAGGGTAACTTCGAAGGGACGGAGCAGCTGTTGATTATTCTTAGGAATGCTGGTCATGTGGATACTGAGATATACAATTCTCTGTTGCGGACCTATGCGAAAGCTGGTAAAATGCCACTCATAGTTGCTGAAAGAATGGAACAGGACAATGTTCAGTTGAATGAAGAGTCTCGTGAGCTTCTAAAGTTGACCACCAAGATGTGTGTGAGTGAAGTTTCAAGCACTTTTTACCACGAAGCCCAAAAAACCAACGAAACTGATCAAACAAACTCGACTCAATCGGCCGTTTATCACTCTTCCAAAACCCTAGAGTTTGAGAAAGGCGGAAGCCCTAGTTCAGCAATCGGAGCTTTTGCCGGCCTTTGCTTACTGAATTCAACAGCCATGGCTACTGCTAGGACCGTCAAGGATGTCTCTCCTCACGAGTTTGTCAAGGCCTATGCCGCTCATCTGAAGCGGTCTGGAAAGGTTGAGCTTCCACCATGGACCGACATTGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCTGACTGGTATTACGTGAGAGCTGCATCCATGGCAAGGAAGATCTACTTGAGGGGAGGTCTTGGTGTTGGAGCATTCAAGAGGATTTATGGTGGAAGCAAGAGGAATGGTAGTCGTCCTCCACACTTCTGCGAAAGCAGTGGTGCCATCGCCCGTCACATTTTACAACAATTGCAGGAGATGAACATTGTTGATGTTGACCCAAAGGGTGGAAGGAGAATTACTTCGAGCGGACGACGGGATCTTGATCAAGTCGCTGGCCGGATTGTTGTTGCCCCTTGA

Protein sequence

MHRSSRLYLATAARRFSGEAYAAAVENTKLEAASGSSGTSGGGRDTLGRRLMSLAFPKRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYAVHLDLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKSPLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRVPNILLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSVKKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLIVAERMEQDNVQLNEESRELLKLTTKMCVSEVSSTFYHEAQKTNETDQTNSTQSAVYHSSKTLEFEKGGSPSSAIGAFAGLCLLNSTAMATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMNIVDVDPKGGRRITSSGRRDLDQVAGRIVVAP
Homology
[Close]
BLAST of CmaCh08G003550 vs. Swiss-Prot
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 1.1e-175
Identity = 315/523 (60.23%), Postives = 401/523 (76.67%), Query Frame = 1 

Query: 3   RSSRLYLATAARRFSGEAYA----AAVENTKLEAASGSSGTSG-------GGRDTLGRRL 62
           RS+R  LA+  R FS  A A    A     K  +  G  G S        GGRDTLG RL
Sbjct: 8   RSARPTLASIHRLFSAAAAATVDTATAPVVKPRSGGGKGGESANKKETVVGGRDTLGGRL 67

Query: 63  MSLAFPKRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKL 122
           +SL + KRSAV+ IRKW+EEGH+VRKYELNRIVRELRK+KRYKHALEICEWM +Q+++KL
Sbjct: 68  LSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKL 127

Query: 123 LPGDYAVHLDLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAK 182
             GDYAVHLDLISKIRGL+SAEKFF D+PD+MRG +A TSLLH +VQN LS+KAEAL  K
Sbjct: 128 QAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEK 187

Query: 183 MSEFGFLKSPLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDV 242
           M E GFLKS L +NHMLS++I+  + EKVP L++ELK  T PD+VTYNL L      NDV
Sbjct: 188 MGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDV 247

Query: 243 EAAENIFLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSL 302
           E AE ++L+ K  K+ PDWV++S L NLY+K    EKA   LK+MEK+ SK+NR++++SL
Sbjct: 248 EGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASL 307

Query: 303 LSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSG 362
           +SL+ NLGDKDGV   WKK+ SSF+KMND+EY+ MIS++VKL + E A+ LY EWESVSG
Sbjct: 308 ISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSG 367

Query: 363 TGDTRVPNILLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQ 422
           TGD R+PN++LA Y+N++++   E FY+R+  KGI PSY+TWE+LTW YLK   MEKVL 
Sbjct: 368 TGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLD 427

Query: 423 FFKNAVGSVKKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTY 482
            F  A+ SVKKW  + RLVKG CK LEEQGN +G E+L+ +L+ AG+V+T++YNSLLRTY
Sbjct: 428 CFGKAIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTY 487

Query: 483 AKAGKMPLIVAERMEQDNVQLNEESRELLKLTTKMCVSEVSST 515
           AKAG+M LIV ERM +DNV+L+EE++EL++LT++M V+E+SST
Sbjct: 488 AKAGEMALIVEERMAKDNVELDEETKELIRLTSQMRVTEISST 530

[Close]
BLAST of CmaCh08G003550 vs. Swiss-Prot
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 277.7 bits (709), Expect = 3.5e-73
Identity = 151/425 (35.53%), Postives = 251/425 (59.06%), Query Frame = 1 

Query: 49  RRLMSLAFPKRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQ-K 108
           +++  +  P+  A   + +W++ G  + K+EL R+V+ELRK KR   ALE+ +WM  + +
Sbjct: 71  KKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGE 130

Query: 109 NMKLLPGDYAVHLDLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEA 168
             +L   D A+ LDLI K+RG+  AE+FF+ LP+  + +  Y SLL+ +V+    EKAEA
Sbjct: 131 RFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEA 190

Query: 169 LMAKMSEFGFLKSPLSFNHMLSLHITNKRLEKVPALVQELK-KNTKPDVVTYNLLLNVCT 228
           L+  M + G+   PL FN M++L++  +  +KV A+V E+K K+ + D+ +YN+ L+ C 
Sbjct: 191 LLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCG 250

Query: 229 LQNDVEAAENIFLEMKN-AKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNR 288
               VE  E ++ +MK+   I P+W +FST+A +Y K   TEKA   L+K+E   + RNR
Sbjct: 251 SLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNR 310

Query: 289 ISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTE 348
           I +  LLSLY +LG+K  + R+W    S    + +  Y  ++SSLV++  +E AEK+Y E
Sbjct: 311 IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEE 370

Query: 349 WESVSGTGDTRVPNILLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQ 408
           W  V  + D R+PN+L+ AY+  +Q++ AE  +D M   G  PS +TWE+L  G+ ++  
Sbjct: 371 WLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRC 430

Query: 409 MEKVLQFFKNAVGS--VKKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEI 468
           + + L   +NA  +     W     ++ G  K  EE+ +    E +L +LR +G ++ + 
Sbjct: 431 ISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKS 490

[Close]
BLAST of CmaCh08G003550 vs. Swiss-Prot
Match: RS193_ARATH (40S ribosomal protein S19-3 OS=Arabidopsis thaliana GN=RPS19C PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.0e-68
Identity = 122/142 (85.92%), Postives = 133/142 (93.66%), Query Frame = 1 

Query: 568 MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAAS 627
           MAT +TVKDVSPHEFVKAYAAHLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAAS
Sbjct: 1   MATGKTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAAS 60

Query: 628 MARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMNIVDVDPKG 687
           MARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG +ARHILQQLQ MNIVD+D KG
Sbjct: 61  MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKG 120

Query: 688 GRRITSSGRRDLDQVAGRIVVA 710
           GR+ITSSG+RDLDQVAGRI  A
Sbjct: 121 GRKITSSGQRDLDQVAGRIAAA 142

[Close]
BLAST of CmaCh08G003550 vs. Swiss-Prot
Match: RS191_ARATH (40S ribosomal protein S19-1 OS=Arabidopsis thaliana GN=RPS19A PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.6e-68
Identity = 121/143 (84.62%), Postives = 134/143 (93.71%), Query Frame = 1 

Query: 568 MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAAS 627
           MAT +TVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAAS
Sbjct: 1   MATGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAAS 60

Query: 628 MARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMNIVDVDPKG 687
           MARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG IARHILQQL+ MNIV++D KG
Sbjct: 61  MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKG 120

Query: 688 GRRITSSGRRDLDQVAGRIVVAP 711
           GRRITSSG+RDLDQVAGRI V P
Sbjct: 121 GRRITSSGQRDLDQVAGRIAVEP 143

[Close]
BLAST of CmaCh08G003550 vs. Swiss-Prot
Match: RS192_ARATH (40S ribosomal protein S19-2 OS=Arabidopsis thaliana GN=RPS19B PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 8.4e-67
Identity = 120/139 (86.33%), Postives = 132/139 (94.96%), Query Frame = 1 

Query: 568 MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAAS 627
           MAT +TVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT R KELAPYDPDWYY+RAAS
Sbjct: 1   MATGKTVKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAAS 60

Query: 628 MARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMNIVDVDPKG 687
           MARKIYLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG IARHILQQL+ M+IV++D KG
Sbjct: 61  MARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKG 120

Query: 688 GRRITSSGRRDLDQVAGRI 707
           GRRITSSG+RDLDQVAGRI
Sbjct: 121 GRRITSSGQRDLDQVAGRI 139

[Close]
BLAST of CmaCh08G003550 vs. TrEMBL
Match: A0A0A0K7E2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390000 PE=4 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 6.6e-236
Identity = 433/537 (80.63%), Postives = 473/537 (88.08%), Query Frame = 1 

Query: 1   MHRSSRLYLATAA-RRFSGEAYAAAVENTKLEAASGSSGTSG--GGRDTLGRRLMSLAFP 60
           M RS R  LATAA RRFSGEA  AA ENT LE A+G+   SG  GGRDTLGRRLMSL FP
Sbjct: 1   MFRSFRPSLATAAARRFSGEASMAASENTALEGAAGTRVVSGKGGGRDTLGRRLMSLIFP 60

Query: 61  KRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYA 120
           KRSAV AIRKWQEEG TVRKYELNR VRELRKLKRYKHALE+CEWMTLQK+M+L+PGDYA
Sbjct: 61  KRSAVTAIRKWQEEGRTVRKYELNRNVRELRKLKRYKHALEVCEWMTLQKDMRLVPGDYA 120

Query: 121 VHLDLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGF 180
           VHLDLI KIRGL+ AEKFF DLPDK+R QS  TSLLH +VQNNLSEKAEALM KMSE GF
Sbjct: 121 VHLDLICKIRGLNRAEKFFEDLPDKIREQSVCTSLLHAYVQNNLSEKAEALMEKMSECGF 180

Query: 181 LKSPLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENI 240
           LKSPLSFNHMLSLHI+NK+LEKVPAL++ LKKNTKPDVVTYNLLLNVCTLQND EAAENI
Sbjct: 181 LKSPLSFNHMLSLHISNKQLEKVPALIEGLKKNTKPDVVTYNLLLNVCTLQNDTEAAENI 240

Query: 241 FLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTN 300
           FLEMK  KI+PDWVSFSTLANLY K QLTEKAA+TLK+MEKMA K NR+S SSLLSLYTN
Sbjct: 241 FLEMKKTKIQPDWVSFSTLANLYCKNQLTEKAAATLKEMEKMAFKSNRLSLSSLLSLYTN 300

Query: 301 LGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRV 360
           LGDK+ V RIWKK+ SSFRKM+D EYMCMISSLVKL++LE+AEKLYTEWESVSGT DTRV
Sbjct: 301 LGDKNEVYRIWKKLKSSFRKMSDREYMCMISSLVKLNELEEAEKLYTEWESVSGTRDTRV 360

Query: 361 PNILLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAV 420
            N++L AYI KNQ++QAESFY+RM  KG +PSYTTWELLTWGYLKENQMEKVL FF+ AV
Sbjct: 361 SNVMLGAYIKKNQIEQAESFYNRMLQKGTVPSYTTWELLTWGYLKENQMEKVLHFFRKAV 420

Query: 421 GSVKKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKM 480
             VKKWNADERLVKGVCK+LEEQGN  G EQLL+ILRNAGHVDTEIYNSLLRTYAKAGKM
Sbjct: 421 NRVKKWNADERLVKGVCKKLEEQGNINGVEQLLLILRNAGHVDTEIYNSLLRTYAKAGKM 480

Query: 481 PLIVAERMEQDNVQLNEESRELLKLTTKMCVSEVSSTFYHEAQKTNETDQTNSTQSA 535
           PLIVAERME+DNVQLN+E+RELL+LT+KMCVSEVSST Y      ++TDQ +S QSA
Sbjct: 481 PLIVAERMERDNVQLNDETRELLRLTSKMCVSEVSSTLY------DKTDQMDSIQSA 531

[Close]
BLAST of CmaCh08G003550 vs. TrEMBL
Match: M5VTF8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004422mg PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 1.2e-197
Identity = 355/511 (69.47%), Postives = 426/511 (83.37%), Query Frame = 1 

Query: 1   MHRSSRLYLATAARRFSGEAYAAAVENTKLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60
           ++R+ R  +A A R F+ EA+      TK   AS    +SG GRDTLGRRLMSL FPKRS
Sbjct: 2   LNRTLRSSIA-AVRHFTAEAHV----ETKAATASVEKSSSG-GRDTLGRRLMSLVFPKRS 61

Query: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYAVHL 120
           AVIAIRKW+EEGH VRKYELNRIVRELRKLKRYKHALEICEWMTLQ++MKLLPGDYAVHL
Sbjct: 62  AVIAIRKWKEEGHKVRKYELNRIVRELRKLKRYKHALEICEWMTLQQDMKLLPGDYAVHL 121

Query: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180
           DLI+K+RGL+SAEKFF DLPD+M G    T+LLH +VQN LS+KAEALMAKMS+ G++K 
Sbjct: 122 DLIAKVRGLNSAEKFFEDLPDQMTGHPTCTALLHTYVQNKLSDKAEALMAKMSQCGYMKH 181

Query: 181 PLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240
           PL++NHMLSL+++N + +KVP ++QELK NT PDVVTYNL L VC  Q+DVE AE +FLE
Sbjct: 182 PLAYNHMLSLYVSNGQFDKVPEVIQELKSNTSPDVVTYNLWLTVCASQSDVETAEKVFLE 241

Query: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGD 300
           +K AK+ PDWV+FSTL NLY K  LTEKAA TLK+MEK+AS++NR ++SSLLSL+TN+GD
Sbjct: 242 LKKAKLNPDWVTFSTLTNLYIKSLLTEKAAVTLKEMEKIASRKNRAAYSSLLSLHTNIGD 301

Query: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRVPNI 360
           +DGV RIWKKM S FRKMND+EY CM+SSLVKL + E+AEKLYTEWESVS T D RV NI
Sbjct: 302 EDGVWRIWKKMKSCFRKMNDAEYTCMLSSLVKLKEFEEAEKLYTEWESVSETHDARVSNI 361

Query: 361 LLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420
           LLAAYINK+QM+ AE+F++RM   GI P Y+TWELLTWG+LK+   EKVL  FK AVGSV
Sbjct: 362 LLAAYINKDQMEMAETFHNRMVQNGITPCYSTWELLTWGFLKQKHTEKVLDNFKKAVGSV 421

Query: 421 KKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480
           K+W+ D+RL+  V  RL+E+GN +G E+LL+ LRNAGHV TEIYNS+LRTYA+AGKMPLI
Sbjct: 422 KRWDPDKRLIGEVFNRLKEEGNIKGAEELLLFLRNAGHVSTEIYNSVLRTYAEAGKMPLI 481

Query: 481 VAERMEQDNVQLNEESRELLKLTTKMCVSEV 512
           VAERME+DNVQL+EE+R L+KLT+ MCVSEV
Sbjct: 482 VAERMEKDNVQLDEETRRLIKLTSTMCVSEV 506

[Close]
BLAST of CmaCh08G003550 vs. TrEMBL
Match: F6HEI3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02800 PE=4 SV=1)

HSP 1 Score: 681.4 bits (1757), Expect = 1.2e-192
Identity = 342/487 (70.23%), Postives = 411/487 (84.39%), Query Frame = 1 

Query: 29  KLEAASGSSGTSGGGRDTLGRRLMSLAFPKRSAVIAIRKWQEEGHTVRKYELNRIVRELR 88
           K + + G+S +SG  RDTLGRRL+SL + KRSAVIAI++W+EEGHTVRKYELNRIVRELR
Sbjct: 11  KPKTSDGNSTSSG--RDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELR 70

Query: 89  KLKRYKHALEICEWMTLQKNMKLLPGDYAVHLDLISKIRGLSSAEKFFMDLPDKMRGQSA 148
           KLKRYKHALEICEWMT Q ++KLL GDYAVHLDLI+KIRGL+SAEKFF DL DKM+GQ  
Sbjct: 71  KLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPT 130

Query: 149 YTSLLHVFVQNNLSEKAEALMAKMSEFGFLKSPLSFNHMLSLHITNKRLEKVPALVQELK 208
            T+LLH +VQN +SEKAEALM KMSE GFLK PL +NHM+SL+I++ +LEKVP ++QELK
Sbjct: 131 CTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK 190

Query: 209 KNTKPDVVTYNLLLNVCTLQNDVEAAENIFLEMKNAKIEPDWVSFSTLANLYSKQQLTEK 268
           KNT PDVVTYNL L VC  QNDVE AE + LE+K AKI+PDWV++S+L NLY K+ L +K
Sbjct: 191 KNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDK 250

Query: 269 AASTLKKMEKMASKRNRISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMIS 328
           AA+TL +MEK  S++ RI++SSL+SL+TN+ DKDGV RIWKK+ S F KMND+EY CMIS
Sbjct: 251 AATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMIS 310

Query: 329 SLVKLDKLEDAEKLYTEWESVSGTGDTRVPNILLAAYINKNQMKQAESFYDRMTLKGIIP 388
           SLVKL + E+AE LY+EW SVS TGD+RVPNILLAAYINKN+M+ AE FY++M  +GI P
Sbjct: 311 SLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITP 370

Query: 389 SYTTWELLTWGYLKENQMEKVLQFFKNAVGSVKKWNADERLVKGVCKRLEEQGNFEGTEQ 448
           SYTTWELLTWGYLK+ QMEKVL +F+ AVGSVKKWN DE+LV+ V K LEEQGN EG E+
Sbjct: 371 SYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGNIEGAEK 430

Query: 449 LLIILRNAGHVDTEIYNSLLRTYAKAGKMPLIVAERMEQDNVQLNEESRELLKLTTKMCV 508
           +L+ILR AGHV TEIYN LLR YAKAGKMPLIVAE M++D V+++EE+  L+K T+KMCV
Sbjct: 431 VLVILRKAGHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMCV 490

Query: 509 SEVSSTF 516
           SEVSS F
Sbjct: 491 SEVSSKF 495

[Close]
BLAST of CmaCh08G003550 vs. TrEMBL
Match: A0A061DRS7_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_004398 PE=4 SV=1)

HSP 1 Score: 680.2 bits (1754), Expect = 2.6e-192
Identity = 346/504 (68.65%), Postives = 413/504 (81.94%), Query Frame = 1 

Query: 11  TAARRFSGEAYAAAVENTKLEAASGSSGTSGGGRDTLGRRLMSLAFPKRSAVIAIRKWQE 70
           +AAR FS EA +AA +   +    G+  + GG RDTLG RL+ L +PKRSAV+ IRKWQE
Sbjct: 11  SAARFFSAEATSAAEK--AIATTEGAVKSGGGSRDTLGWRLIGLVYPKRSAVVTIRKWQE 70

Query: 71  EGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYAVHLDLISKIRGLS 130
           EG TVRKYELNR+VRELRKLKRYKHALEICEWM LQ+++KLLPGDYAVHLDLI+K+RGL+
Sbjct: 71  EGRTVRKYELNRVVRELRKLKRYKHALEICEWMRLQQDIKLLPGDYAVHLDLIAKVRGLA 130

Query: 131 SAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKSPLSFNHMLSL 190
           SAEKFF DLPD+MRGQ+  T+LLH +VQN L  KAE LM KMSE GF+K PL FNHMLSL
Sbjct: 131 SAEKFFEDLPDQMRGQATCTALLHTYVQNKLFAKAETLMKKMSECGFVKCPLPFNHMLSL 190

Query: 191 HITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLEMKNAKIEPDW 250
           +I+  +LEKVP +VQELKKNT PD+VTYNLLL+VC  QN +E AE I  ++K AKI+PDW
Sbjct: 191 YISEGQLEKVPGIVQELKKNTSPDIVTYNLLLSVCASQNKIETAEEILHDLKKAKIDPDW 250

Query: 251 VSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGDKDGVCRIWKK 310
           ++ S L NLY + +  EKA STLK MEK AS++NR+++SSLLSL+TN+GDKDGV RIWKK
Sbjct: 251 MTCSALTNLYIRGKEFEKATSTLKDMEKKASRKNRVAYSSLLSLHTNMGDKDGVQRIWKK 310

Query: 311 MNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRVPNILLAAYINKNQ 370
           M S FRKMND+EY CMISSLVKL   E+AE LY EWESVSG+ D RVPNILLAAYIN+ +
Sbjct: 311 MKSCFRKMNDAEYTCMISSLVKLGDFEEAEILYNEWESVSGSADARVPNILLAAYINQER 370

Query: 371 MKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSVKKWNADERLV 430
           M+ AE FY+R+  KGI P YTTWELLTWGYLK  ++EKVL  F+ AVGSV+KWN ++RLV
Sbjct: 371 MEIAEDFYERIVQKGISPCYTTWELLTWGYLKNQRIEKVLDCFERAVGSVRKWNPNDRLV 430

Query: 431 KGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLIVAERMEQDNV 490
             V K+LEE GN EG E+LL+ILRNAGHV T++YNSLLR YAKAGKMPLIVAERM +DNV
Sbjct: 431 GEVFKKLEELGNTEGVEKLLVILRNAGHVSTKVYNSLLRAYAKAGKMPLIVAERMRKDNV 490

Query: 491 QLNEESRELLKLTTKMCVSEVSST 515
            L+EE+ EL+ LT+KMCVSEVSS+
Sbjct: 491 PLDEETHELINLTSKMCVSEVSSS 512

[Close]
BLAST of CmaCh08G003550 vs. TrEMBL
Match: A0A0D2RVG4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G080600 PE=4 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 9.9e-192
Identity = 346/504 (68.65%), Postives = 419/504 (83.13%), Query Frame = 1 

Query: 12  AARRFSGEAYAAAVENTKLEAASGSSGTSGGGRDTLGRRLMSLAFPKRSAVIAIRKWQEE 71
           AAR FS EA AA    T  ++A+ + G  G GR+TLG RL+ L +PKRSAV+ IRKW EE
Sbjct: 12  AARFFSTEAAAAEKAVTTTKSAAKTGGGGGVGRETLGWRLIGLVYPKRSAVVTIRKWLEE 71

Query: 72  GHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYAVHLDLISKIRGLSS 131
           GHTVRKYELNRIVRELRKLKRYKHALEICEWM LQ+++KLLPGDYAVHLDLI+K+RGL+S
Sbjct: 72  GHTVRKYELNRIVRELRKLKRYKHALEICEWMRLQQDIKLLPGDYAVHLDLIAKVRGLTS 131

Query: 132 AEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKSPLSFNHMLSLH 191
           AEKFF DLP+KMRGQ+  T+LLH +VQN LS KAEALM KMSE GF+K+PL +NHM+SL 
Sbjct: 132 AEKFFEDLPEKMRGQATCTALLHTYVQNKLSAKAEALMEKMSECGFVKNPLPYNHMISLC 191

Query: 192 ITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLEMKNAKIEPDWV 251
           I+   LEKVPA+V+ELKKNT PD+VT+NLLL+VC  QN VE+A  IF E+K AKIEPDWV
Sbjct: 192 ISQGELEKVPAIVKELKKNTSPDIVTFNLLLSVCASQNKVESAGKIFDELKKAKIEPDWV 251

Query: 252 SFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGDKDGVCRIWKKM 311
           ++S L NLY K +  EKAASTLK+MEK AS++NR+ + SL+SL+TN+GDKDGV +IWKKM
Sbjct: 252 TYSALTNLYIKGKQFEKAASTLKEMEKKASRKNRVVYPSLISLHTNMGDKDGVQQIWKKM 311

Query: 312 NSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRVPNILLAAYINKNQM 371
            S FRKMND+EY CMISSLVKL   E+AEKLY EWESVSG+GD RVPNILLA YIN ++M
Sbjct: 312 KSCFRKMNDAEYTCMISSLVKLGDFEEAEKLYNEWESVSGSGDARVPNILLATYINGDKM 371

Query: 372 KQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSVKKWNADERLVK 431
             AE+FY ++  KGI P YTTWELLTWGYL++ QMEKVL  FK AV SVKKWN +E+LV+
Sbjct: 372 DVAENFYQQIAQKGISPCYTTWELLTWGYLRKQQMEKVLDCFKQAVCSVKKWNPNEKLVR 431

Query: 432 GVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLIVAERMEQDNVQ 491
            V  +LE+ G+ E  E+LL+ILR+AGHV T++YNSLLR YAKAGKMPLIVAERM++DNV+
Sbjct: 432 EVFNKLEDLGDTEDAEKLLVILRDAGHVSTKVYNSLLRVYAKAGKMPLIVAERMQKDNVR 491

Query: 492 LNEESRELLKLTTKMCVSEVSSTF 516
           L+EE+ +L+KLT+KM V+EVSS+F
Sbjct: 492 LDEETHKLIKLTSKMRVTEVSSSF 515

[Close]
BLAST of CmaCh08G003550 vs. TAIR10
Match: AT4G02820.1 (AT4G02820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 618.2 bits (1593), Expect = 6.2e-177
Identity = 315/523 (60.23%), Postives = 401/523 (76.67%), Query Frame = 1 

Query: 3   RSSRLYLATAARRFSGEAYA----AAVENTKLEAASGSSGTSG-------GGRDTLGRRL 62
           RS+R  LA+  R FS  A A    A     K  +  G  G S        GGRDTLG RL
Sbjct: 8   RSARPTLASIHRLFSAAAAATVDTATAPVVKPRSGGGKGGESANKKETVVGGRDTLGGRL 67

Query: 63  MSLAFPKRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKL 122
           +SL + KRSAV+ IRKW+EEGH+VRKYELNRIVRELRK+KRYKHALEICEWM +Q+++KL
Sbjct: 68  LSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKL 127

Query: 123 LPGDYAVHLDLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAK 182
             GDYAVHLDLISKIRGL+SAEKFF D+PD+MRG +A TSLLH +VQN LS+KAEAL  K
Sbjct: 128 QAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEK 187

Query: 183 MSEFGFLKSPLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDV 242
           M E GFLKS L +NHMLS++I+  + EKVP L++ELK  T PD+VTYNL L      NDV
Sbjct: 188 MGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDV 247

Query: 243 EAAENIFLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSL 302
           E AE ++L+ K  K+ PDWV++S L NLY+K    EKA   LK+MEK+ SK+NR++++SL
Sbjct: 248 EGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASL 307

Query: 303 LSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSG 362
           +SL+ NLGDKDGV   WKK+ SSF+KMND+EY+ MIS++VKL + E A+ LY EWESVSG
Sbjct: 308 ISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSG 367

Query: 363 TGDTRVPNILLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQ 422
           TGD R+PN++LA Y+N++++   E FY+R+  KGI PSY+TWE+LTW YLK   MEKVL 
Sbjct: 368 TGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLD 427

Query: 423 FFKNAVGSVKKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTY 482
            F  A+ SVKKW  + RLVKG CK LEEQGN +G E+L+ +L+ AG+V+T++YNSLLRTY
Sbjct: 428 CFGKAIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTY 487

Query: 483 AKAGKMPLIVAERMEQDNVQLNEESRELLKLTTKMCVSEVSST 515
           AKAG+M LIV ERM +DNV+L+EE++EL++LT++M V+E+SST
Sbjct: 488 AKAGEMALIVEERMAKDNVELDEETKELIRLTSQMRVTEISST 530

[Close]
BLAST of CmaCh08G003550 vs. TAIR10
Match: AT1G02150.1 (AT1G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 277.7 bits (709), Expect = 2.0e-74
Identity = 151/425 (35.53%), Postives = 251/425 (59.06%), Query Frame = 1 

Query: 49  RRLMSLAFPKRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQ-K 108
           +++  +  P+  A   + +W++ G  + K+EL R+V+ELRK KR   ALE+ +WM  + +
Sbjct: 71  KKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGE 130

Query: 109 NMKLLPGDYAVHLDLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEA 168
             +L   D A+ LDLI K+RG+  AE+FF+ LP+  + +  Y SLL+ +V+    EKAEA
Sbjct: 131 RFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEA 190

Query: 169 LMAKMSEFGFLKSPLSFNHMLSLHITNKRLEKVPALVQELK-KNTKPDVVTYNLLLNVCT 228
           L+  M + G+   PL FN M++L++  +  +KV A+V E+K K+ + D+ +YN+ L+ C 
Sbjct: 191 LLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCG 250

Query: 229 LQNDVEAAENIFLEMKN-AKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNR 288
               VE  E ++ +MK+   I P+W +FST+A +Y K   TEKA   L+K+E   + RNR
Sbjct: 251 SLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNR 310

Query: 289 ISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTE 348
           I +  LLSLY +LG+K  + R+W    S    + +  Y  ++SSLV++  +E AEK+Y E
Sbjct: 311 IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEE 370

Query: 349 WESVSGTGDTRVPNILLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQ 408
           W  V  + D R+PN+L+ AY+  +Q++ AE  +D M   G  PS +TWE+L  G+ ++  
Sbjct: 371 WLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRC 430

Query: 409 MEKVLQFFKNAVGS--VKKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEI 468
           + + L   +NA  +     W     ++ G  K  EE+ +    E +L +LR +G ++ + 
Sbjct: 431 ISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKS 490

[Close]
BLAST of CmaCh08G003550 vs. TAIR10
Match: AT5G61170.1 (AT5G61170.1 Ribosomal protein S19e family protein)

HSP 1 Score: 261.9 bits (668), Expect = 1.1e-69
Identity = 122/142 (85.92%), Postives = 133/142 (93.66%), Query Frame = 1 

Query: 568 MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAAS 627
           MAT +TVKDVSPHEFVKAYAAHLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAAS
Sbjct: 1   MATGKTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAAS 60

Query: 628 MARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMNIVDVDPKG 687
           MARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG +ARHILQQLQ MNIVD+D KG
Sbjct: 61  MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKG 120

Query: 688 GRRITSSGRRDLDQVAGRIVVA 710
           GR+ITSSG+RDLDQVAGRI  A
Sbjct: 121 GRKITSSGQRDLDQVAGRIAAA 142

[Close]
BLAST of CmaCh08G003550 vs. TAIR10
Match: AT3G02080.1 (AT3G02080.1 Ribosomal protein S19e family protein)

HSP 1 Score: 261.5 bits (667), Expect = 1.5e-69
Identity = 121/143 (84.62%), Postives = 134/143 (93.71%), Query Frame = 1 

Query: 568 MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAAS 627
           MAT +TVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAAS
Sbjct: 1   MATGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAAS 60

Query: 628 MARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMNIVDVDPKG 687
           MARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG IARHILQQL+ MNIV++D KG
Sbjct: 61  MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKG 120

Query: 688 GRRITSSGRRDLDQVAGRIVVAP 711
           GRRITSSG+RDLDQVAGRI V P
Sbjct: 121 GRRITSSGQRDLDQVAGRIAVEP 143

[Close]
BLAST of CmaCh08G003550 vs. TAIR10
Match: AT5G15520.1 (AT5G15520.1 Ribosomal protein S19e family protein)

HSP 1 Score: 256.5 bits (654), Expect = 4.7e-68
Identity = 120/139 (86.33%), Postives = 132/139 (94.96%), Query Frame = 1 

Query: 568 MATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAAS 627
           MAT +TVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT R KELAPYDPDWYY+RAAS
Sbjct: 1   MATGKTVKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAAS 60

Query: 628 MARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMNIVDVDPKG 687
           MARKIYLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG IARHILQQL+ M+IV++D KG
Sbjct: 61  MARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKG 120

Query: 688 GRRITSSGRRDLDQVAGRI 707
           GRRITSSG+RDLDQVAGRI
Sbjct: 121 GRRITSSGQRDLDQVAGRI 139

[Close]
BLAST of CmaCh08G003550 vs. NCBI nr
Match: gi|659100982|ref|XP_008451368.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Cucumis melo])

HSP 1 Score: 855.9 bits (2210), Expect = 5.0e-245
Identity = 442/536 (82.46%), Postives = 487/536 (90.86%), Query Frame = 1 

Query: 1   MHRSSRLYLATAA-RRFSGEAYAAAVENTKLEAASGSSGTS--GGGRDTLGRRLMSLAFP 60
           M RS R  LATAA RRFSGEA  AA ENT +E A+G+   S  GGGRDTLGRRLMSL FP
Sbjct: 1   MFRSFRSSLATAAARRFSGEACVAAAENTSVEGAAGTGVVSRKGGGRDTLGRRLMSLIFP 60

Query: 61  KRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYA 120
           KRSAVIAIRKWQEEGHT+RKYELN IVRELRKLKRYKHALE+CEWMTLQK+MKLLPGDYA
Sbjct: 61  KRSAVIAIRKWQEEGHTIRKYELNHIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYA 120

Query: 121 VHLDLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGF 180
           V LDLI+KIRGL+SAEKFF DLPDK+R QS  T+LLH +VQ NLSEKAEALM KMSE GF
Sbjct: 121 VQLDLIAKIRGLNSAEKFFEDLPDKIREQSVCTALLHAYVQKNLSEKAEALMEKMSECGF 180

Query: 181 LKSPLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENI 240
           LKSPLSFNHMLSLHI+NK+LEKVPAL++ LKKNTKPDVVTYNLLLNVCTLQND EAAENI
Sbjct: 181 LKSPLSFNHMLSLHISNKQLEKVPALIEVLKKNTKPDVVTYNLLLNVCTLQNDAEAAENI 240

Query: 241 FLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTN 300
           FLEMK  K++PDW+SFSTLANLY K+QLTEKAA+TLK+MEKMA KRNR+SFSSLLSLY N
Sbjct: 241 FLEMKKTKVQPDWLSFSTLANLYCKKQLTEKAAATLKEMEKMAFKRNRLSFSSLLSLYAN 300

Query: 301 LGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRV 360
           LGDK+ V RIWKK+ SSFRKM+DSEYMCM+SSLVKL++LE+AEKLYTEWESVSGT DTR+
Sbjct: 301 LGDKNEVHRIWKKLKSSFRKMSDSEYMCMVSSLVKLNELEEAEKLYTEWESVSGTRDTRI 360

Query: 361 PNILLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAV 420
            N++LAAYINKNQM+QAESFY+RM+LKGI+PSYTTWELLTWGYLKENQMEKVL FFKNAV
Sbjct: 361 SNVMLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAV 420

Query: 421 GSVKKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKM 480
           GSVKKWNADERLVKGVCK+LEEQGN EG EQLL+ILRNAGHVDTEIYNSLLRTYAKAGKM
Sbjct: 421 GSVKKWNADERLVKGVCKKLEEQGNIEGVEQLLVILRNAGHVDTEIYNSLLRTYAKAGKM 480

Query: 481 PLIVAERMEQDNVQLNEESRELLKLTTKMCVSEVSSTFYHEAQKTNETDQTNSTQS 534
           PLIVAERME+DNVQLN+E+RELL+LT+KMCVSEVSST Y      ++TDQTNS QS
Sbjct: 481 PLIVAERMEKDNVQLNDETRELLRLTSKMCVSEVSSTLY------DKTDQTNSVQS 530

[Close]
BLAST of CmaCh08G003550 vs. NCBI nr
Match: gi|449462348|ref|XP_004148903.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Cucumis sativus])

HSP 1 Score: 825.1 bits (2130), Expect = 9.4e-236
Identity = 433/537 (80.63%), Postives = 473/537 (88.08%), Query Frame = 1 

Query: 1   MHRSSRLYLATAA-RRFSGEAYAAAVENTKLEAASGSSGTSG--GGRDTLGRRLMSLAFP 60
           M RS R  LATAA RRFSGEA  AA ENT LE A+G+   SG  GGRDTLGRRLMSL FP
Sbjct: 1   MFRSFRPSLATAAARRFSGEASMAASENTALEGAAGTRVVSGKGGGRDTLGRRLMSLIFP 60

Query: 61  KRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYA 120
           KRSAV AIRKWQEEG TVRKYELNR VRELRKLKRYKHALE+CEWMTLQK+M+L+PGDYA
Sbjct: 61  KRSAVTAIRKWQEEGRTVRKYELNRNVRELRKLKRYKHALEVCEWMTLQKDMRLVPGDYA 120

Query: 121 VHLDLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGF 180
           VHLDLI KIRGL+ AEKFF DLPDK+R QS  TSLLH +VQNNLSEKAEALM KMSE GF
Sbjct: 121 VHLDLICKIRGLNRAEKFFEDLPDKIREQSVCTSLLHAYVQNNLSEKAEALMEKMSECGF 180

Query: 181 LKSPLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENI 240
           LKSPLSFNHMLSLHI+NK+LEKVPAL++ LKKNTKPDVVTYNLLLNVCTLQND EAAENI
Sbjct: 181 LKSPLSFNHMLSLHISNKQLEKVPALIEGLKKNTKPDVVTYNLLLNVCTLQNDTEAAENI 240

Query: 241 FLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTN 300
           FLEMK  KI+PDWVSFSTLANLY K QLTEKAA+TLK+MEKMA K NR+S SSLLSLYTN
Sbjct: 241 FLEMKKTKIQPDWVSFSTLANLYCKNQLTEKAAATLKEMEKMAFKSNRLSLSSLLSLYTN 300

Query: 301 LGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRV 360
           LGDK+ V RIWKK+ SSFRKM+D EYMCMISSLVKL++LE+AEKLYTEWESVSGT DTRV
Sbjct: 301 LGDKNEVYRIWKKLKSSFRKMSDREYMCMISSLVKLNELEEAEKLYTEWESVSGTRDTRV 360

Query: 361 PNILLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAV 420
            N++L AYI KNQ++QAESFY+RM  KG +PSYTTWELLTWGYLKENQMEKVL FF+ AV
Sbjct: 361 SNVMLGAYIKKNQIEQAESFYNRMLQKGTVPSYTTWELLTWGYLKENQMEKVLHFFRKAV 420

Query: 421 GSVKKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKM 480
             VKKWNADERLVKGVCK+LEEQGN  G EQLL+ILRNAGHVDTEIYNSLLRTYAKAGKM
Sbjct: 421 NRVKKWNADERLVKGVCKKLEEQGNINGVEQLLLILRNAGHVDTEIYNSLLRTYAKAGKM 480

Query: 481 PLIVAERMEQDNVQLNEESRELLKLTTKMCVSEVSSTFYHEAQKTNETDQTNSTQSA 535
           PLIVAERME+DNVQLN+E+RELL+LT+KMCVSEVSST Y      ++TDQ +S QSA
Sbjct: 481 PLIVAERMERDNVQLNDETRELLRLTSKMCVSEVSSTLY------DKTDQMDSIQSA 531

[Close]
BLAST of CmaCh08G003550 vs. NCBI nr
Match: gi|1009148725|ref|XP_015892090.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 725.7 bits (1872), Expect = 7.8e-206
Identity = 366/513 (71.35%), Postives = 433/513 (84.41%), Query Frame = 1 

Query: 3   RSSRLYLATAARRFSGEAYAAAVENTKLEAASGSSGTSGGGRDTLGRRLMSLAFPKRSAV 62
           RS R YLA A R FS  A AA   +T    A  S G   GGRDTLG+RLMSL +PKRSAV
Sbjct: 4   RSIRTYLA-AVRHFSAAASAAEKASTTCAVAKNSGG---GGRDTLGKRLMSLVYPKRSAV 63

Query: 63  IAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYAVHLDL 122
           IAI KW+EEGH+VRKYELNRIVRELRKLKRYKHALEICEWMTLQ+++KL+PGDYAVHLDL
Sbjct: 64  IAISKWKEEGHSVRKYELNRIVRELRKLKRYKHALEICEWMTLQQDIKLVPGDYAVHLDL 123

Query: 123 ISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKSPL 182
           I+K+RG+ SAEKFF DLP+KM GQ+  T+LLH + +NNLS KAEALMAKMSE GFL++PL
Sbjct: 124 IAKVRGIKSAEKFFEDLPEKMTGQATCTALLHTYAKNNLSSKAEALMAKMSECGFLRNPL 183

Query: 183 SFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLEMK 242
            +NHMLSL+I+N +LEKVP +V+ELKKN  PDVVTYNLLL VC  QNDVE AE + +E++
Sbjct: 184 PYNHMLSLYISNGQLEKVPKMVEELKKNASPDVVTYNLLLTVCASQNDVETAEKVLVELR 243

Query: 243 NAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGDKD 302
            +KI PDWV++S+L NLY K   TEKAASTLK+MEKM S++NR+++SSLLSL+TN+ DKD
Sbjct: 244 KSKINPDWVTYSSLTNLYIKNAFTEKAASTLKEMEKMVSRKNRVAYSSLLSLHTNIRDKD 303

Query: 303 GVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRVPNILL 362
           GVCRIWKKM S FRKMND+EY CMISSLVKL++ ++AE LY EWES+SGTGD RVPNILL
Sbjct: 304 GVCRIWKKMKSCFRKMNDAEYTCMISSLVKLEEFKEAEDLYNEWESISGTGDARVPNILL 363

Query: 363 AAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSVKK 422
           AAYIN+NQM+ AE FYDR+  KGI P YTTWELLTWGYLKE QM+KVL +FK AV SVKK
Sbjct: 364 AAYINRNQMETAEIFYDRLAEKGINPCYTTWELLTWGYLKEKQMDKVLDYFKKAVNSVKK 423

Query: 423 WNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLIVA 482
           W+ D+RLV+ V KRLEEQGN E  EQ+L+ILRNAGH++TEIYNS+LRTYA AGKMPLIVA
Sbjct: 424 WDPDDRLVREVFKRLEEQGNVEVAEQMLVILRNAGHLNTEIYNSILRTYATAGKMPLIVA 483

Query: 483 ERMEQDNVQLNEESRELLKLTTKMCVSEVSSTF 516
           ERME+DNV+L+EE+REL+K T+KM VSEV+  F
Sbjct: 484 ERMEKDNVELDEETRELIKKTSKMRVSEVTCNF 512

[Close]
BLAST of CmaCh08G003550 vs. NCBI nr
Match: gi|645259260|ref|XP_008235277.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Prunus mume])

HSP 1 Score: 700.7 bits (1807), Expect = 2.7e-198
Identity = 353/502 (70.32%), Postives = 421/502 (83.86%), Query Frame = 1 

Query: 12  AARRFSGEAYAAAVENTKLEAASGSSGTSGGGRDTLGRRLMSLAFPKRSAVIAIRKWQEE 71
           A R F+ EA+      TK   AS    +SG GRDTLGRRLMSL FPKRSAVIAIRKW+EE
Sbjct: 12  AVRHFTAEAHV----ETKAATASVEKSSSG-GRDTLGRRLMSLVFPKRSAVIAIRKWKEE 71

Query: 72  GHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYAVHLDLISKIRGLSS 131
           GH VRKYELNRIVRELRKLKRYKHALEICEWMTLQ++MKLLPGDYAVHLDLI+K+RGL+S
Sbjct: 72  GHKVRKYELNRIVRELRKLKRYKHALEICEWMTLQQDMKLLPGDYAVHLDLIAKVRGLNS 131

Query: 132 AEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKSPLSFNHMLSLH 191
           AEKFF DLPD+M  +   T+LLH +VQN LS+KAEALMAKMS+ G++K PL++NH+LSL+
Sbjct: 132 AEKFFEDLPDQMTDRPTCTALLHTYVQNKLSDKAEALMAKMSQCGYMKHPLAYNHILSLY 191

Query: 192 ITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLEMKNAKIEPDWV 251
           ++N + +KVP ++QELK NT PDVVTYNL L VC LQ+DVE AE +FLE+K AK+ PDWV
Sbjct: 192 VSNGQFDKVPEVIQELKSNTSPDVVTYNLWLTVCALQSDVETAEKVFLELKKAKLNPDWV 251

Query: 252 SFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGDKDGVCRIWKKM 311
           +FSTL NLY K  LTEKAA TLK+MEK+AS+ NR+++SSL+SL+TN+GDKDGV RIWKKM
Sbjct: 252 TFSTLTNLYIKSLLTEKAAVTLKEMEKIASRENRVAYSSLVSLHTNIGDKDGVWRIWKKM 311

Query: 312 NSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRVPNILLAAYINKNQM 371
            S FRKMND+EY CM+SSLVKL + E+AEKLYTEWESVSGT D RV NILLAAYINK+QM
Sbjct: 312 KSCFRKMNDAEYTCMLSSLVKLKEFEEAEKLYTEWESVSGTHDARVSNILLAAYINKDQM 371

Query: 372 KQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSVKKWNADERLVK 431
           + AE+F++RM   GI+  Y+TWELLTWG+LK+   EKVL  FK AVGSVK+W+ D+RL+ 
Sbjct: 372 EMAETFHNRMVQNGIMSCYSTWELLTWGFLKQKHTEKVLDNFKKAVGSVKRWDPDKRLIG 431

Query: 432 GVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLIVAERMEQDNVQ 491
            V  RL E+GN +G E+LL+ LRNAGHV TEIYNSLLRTYA+AGKMPLIVAERME+DNVQ
Sbjct: 432 EVFNRLREEGNIQGAEELLVFLRNAGHVSTEIYNSLLRTYAEAGKMPLIVAERMEKDNVQ 491

Query: 492 LNEESRELLKLTTKMCVSEVSS 514
           L+EE+R L+KLT+ MCVSEV S
Sbjct: 492 LDEETRRLIKLTSTMCVSEVPS 508

[Close]
BLAST of CmaCh08G003550 vs. NCBI nr
Match: gi|595790481|ref|XP_007198989.1| (hypothetical protein PRUPE_ppa004422mg [Prunus persica])

HSP 1 Score: 698.0 bits (1800), Expect = 1.7e-197
Identity = 355/511 (69.47%), Postives = 426/511 (83.37%), Query Frame = 1 

Query: 1   MHRSSRLYLATAARRFSGEAYAAAVENTKLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60
           ++R+ R  +A A R F+ EA+      TK   AS    +SG GRDTLGRRLMSL FPKRS
Sbjct: 2   LNRTLRSSIA-AVRHFTAEAHV----ETKAATASVEKSSSG-GRDTLGRRLMSLVFPKRS 61

Query: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYAVHL 120
           AVIAIRKW+EEGH VRKYELNRIVRELRKLKRYKHALEICEWMTLQ++MKLLPGDYAVHL
Sbjct: 62  AVIAIRKWKEEGHKVRKYELNRIVRELRKLKRYKHALEICEWMTLQQDMKLLPGDYAVHL 121

Query: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180
           DLI+K+RGL+SAEKFF DLPD+M G    T+LLH +VQN LS+KAEALMAKMS+ G++K 
Sbjct: 122 DLIAKVRGLNSAEKFFEDLPDQMTGHPTCTALLHTYVQNKLSDKAEALMAKMSQCGYMKH 181

Query: 181 PLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240
           PL++NHMLSL+++N + +KVP ++QELK NT PDVVTYNL L VC  Q+DVE AE +FLE
Sbjct: 182 PLAYNHMLSLYVSNGQFDKVPEVIQELKSNTSPDVVTYNLWLTVCASQSDVETAEKVFLE 241

Query: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGD 300
           +K AK+ PDWV+FSTL NLY K  LTEKAA TLK+MEK+AS++NR ++SSLLSL+TN+GD
Sbjct: 242 LKKAKLNPDWVTFSTLTNLYIKSLLTEKAAVTLKEMEKIASRKNRAAYSSLLSLHTNIGD 301

Query: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRVPNI 360
           +DGV RIWKKM S FRKMND+EY CM+SSLVKL + E+AEKLYTEWESVS T D RV NI
Sbjct: 302 EDGVWRIWKKMKSCFRKMNDAEYTCMLSSLVKLKEFEEAEKLYTEWESVSETHDARVSNI 361

Query: 361 LLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420
           LLAAYINK+QM+ AE+F++RM   GI P Y+TWELLTWG+LK+   EKVL  FK AVGSV
Sbjct: 362 LLAAYINKDQMEMAETFHNRMVQNGITPCYSTWELLTWGFLKQKHTEKVLDNFKKAVGSV 421

Query: 421 KKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480
           K+W+ D+RL+  V  RL+E+GN +G E+LL+ LRNAGHV TEIYNS+LRTYA+AGKMPLI
Sbjct: 422 KRWDPDKRLIGEVFNRLKEEGNIKGAEELLLFLRNAGHVSTEIYNSVLRTYAEAGKMPLI 481

Query: 481 VAERMEQDNVQLNEESRELLKLTTKMCVSEV 512
           VAERME+DNVQL+EE+R L+KLT+ MCVSEV
Sbjct: 482 VAERMEKDNVQLDEETRRLIKLTSTMCVSEV 506

The following BLAST results are available for this feature:
BLAST of CmaCh08G003550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP302_ARATH1.1e-17560.23Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop... [more]
PPR3_ARATH3.5e-7335.53Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN... [more]
RS193_ARATH2.0e-6885.9240S ribosomal protein S19-3 OS=Arabidopsis thaliana GN=RPS19C PE=2 SV=1[more]
RS191_ARATH2.6e-6884.6240S ribosomal protein S19-1 OS=Arabidopsis thaliana GN=RPS19A PE=2 SV=1[more]
RS192_ARATH8.4e-6786.3340S ribosomal protein S19-2 OS=Arabidopsis thaliana GN=RPS19B PE=2 SV=1[more]
BLAST of CmaCh08G003550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7E2_CUCSA6.6e-23680.63Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390000 PE=4 SV=1[more]
M5VTF8_PRUPE1.2e-19769.47Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004422mg PE=4 SV=1[more]
F6HEI3_VITVI1.2e-19270.23Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02800 PE=4 SV=... [more]
A0A061DRS7_THECC2.6e-19268.65Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_004... [more]
A0A0D2RVG4_GOSRA9.9e-19268.65Uncharacterized protein OS=Gossypium raimondii GN=B456_004G080600 PE=4 SV=1[more]
BLAST of CmaCh08G003550 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02820.16.2e-17760.23 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G02150.12.0e-7435.53 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G61170.11.1e-6985.92 Ribosomal protein S19e family protein[more]
AT3G02080.11.5e-6984.62 Ribosomal protein S19e family protein[more]
AT5G15520.14.7e-6886.33 Ribosomal protein S19e family protein[more]
BLAST of CmaCh08G003550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100982|ref|XP_008451368.1|5.0e-24582.46PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial ... [more]
gi|449462348|ref|XP_004148903.1|9.4e-23680.63PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial ... [more]
gi|1009148725|ref|XP_015892090.1|7.8e-20671.35PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial ... [more]
gi|645259260|ref|XP_008235277.1|2.7e-19870.32PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial ... [more]
gi|595790481|ref|XP_007198989.1|1.7e-19769.47hypothetical protein PRUPE_ppa004422mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001266Ribosomal_S19e
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR011991Winged helix-turn-helix DNA-binding domain
IPR018277Ribosomal_S19e_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0006606 protein import into nucleus
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0005515 protein binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G003550.1CmaCh08G003550.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001266Ribosomal protein S19ePRODOMPD003854coord: 569..687
score: 5.0
IPR001266Ribosomal protein S19ePFAMPF01090Ribosomal_S19ecoord: 573..707
score: 1.5
IPR001266Ribosomal protein S19eSMARTSM01413Ribosomal_S19e_2coord: 573..709
score: 1.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 286..312
score: 1.0coord: 323..346
score: 0.061coord: 359..386
score: 0.074coord: 148..177
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 213..258
score: 9.3
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 216..250
score: 5.7E-7coord: 148..177
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 319..349
score: 6.763coord: 180..210
score: 6.051coord: 284..314
score: 7.355coord: 354..388
score: 9.449coord: 214..248
score: 11.049coord: 145..179
score: 8.221coord: 389..419
score: 5.799coord: 249..283
score: 7.333coord: 460..496
score: 6
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 154..291
score: 2.8E-7coord: 327..381
score: 2.
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 573..708
score: 5.03
IPR018277Ribosomal protein S19e, conserved sitePROSITEPS00628RIBOSOMAL_S19Ecoord: 657..676
scor
NoneNo IPR availableunknownCoilCoilcoord: 482..502
score: -coord: 262..282
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 50..501
score: 5.5E
NoneNo IPR availablePANTHERPTHR24015:SF27SUBFAMILY NOT NAMEDcoord: 50..501
score: 5.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh08G003550Cucsa.084550Cucumber (Gy14) v1cgycmaB0158
CmaCh08G003550Cla014756Watermelon (97103) v1cmawmB856
CmaCh08G003550Csa7G390000Cucumber (Chinese Long) v2cmacuB914
CmaCh08G003550MELO3C015840Melon (DHL92) v3.5.1cmameB825
CmaCh08G003550ClCG09G006990Watermelon (Charleston Gray)cmawcgB786
CmaCh08G003550CSPI07G16410Wild cucumber (PI 183967)cmacpiB934
CmaCh08G003550CmoCh08G003520Cucurbita moschata (Rifu)cmacmoB913
CmaCh08G003550CmoCh17G011460Cucurbita moschata (Rifu)cmacmoB896
CmaCh08G003550Lsi02G022980Bottle gourd (USVL1VR-Ls)cmalsiB822
CmaCh08G003550Cp4.1LG17g06550Cucurbita pepo (Zucchini)cmacpeB917
CmaCh08G003550MELO3C015840.2Melon (DHL92) v3.6.1cmamedB923
CmaCh08G003550CsaV3_7G028160Cucumber (Chinese Long) v3cmacucB1084
CmaCh08G003550Cla97C09G169580Watermelon (97103) v2cmawmbB940
CmaCh08G003550Bhi09G000861Wax gourdcmawgoB1131
CmaCh08G003550CsGy7G014890Cucumber (Gy14) v2cgybcmaB973
CmaCh08G003550Carg22194Silver-seed gourdcarcmaB1192
CmaCh08G003550Carg07244Silver-seed gourdcarcmaB0148
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh08G003550CmaCh17G011690Cucurbita maxima (Rimu)cmacmaB382
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh08G003550Cucurbita pepo (Zucchini)cmacpeB902
CmaCh08G003550Cucurbita pepo (Zucchini)cmacpeB918
CmaCh08G003550Bottle gourd (USVL1VR-Ls)cmalsiB816
CmaCh08G003550Bottle gourd (USVL1VR-Ls)cmalsiB841
CmaCh08G003550Cucumber (Chinese Long) v3cmacucB1051
CmaCh08G003550Watermelon (97103) v2cmawmbB929
CmaCh08G003550Wax gourdcmawgoB1114
CmaCh08G003550Cucurbita maxima (Rimu)cmacmaB465
CmaCh08G003550Cucurbita maxima (Rimu)cmacmaB555
CmaCh08G003550Cucurbita moschata (Rifu)cmacmoB914
CmaCh08G003550Watermelon (Charleston Gray)cmawcgB813
CmaCh08G003550Watermelon (97103) v1cmawmB867