Lsi02G022980 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi02G022980
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing family protein
Locationchr02 : 29574220 .. 29576969 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGTCGTTTATCATCACCGCCACTTTACTTTAGTTCCTCACCTTCGTTTCAAAACTTGACCACGATGTTCCGCTCGTTGCGGCCTTCTCTAGCGACGGCCGCCGCCCGCAGATTTTCCGGGGAAGCCCACAAGGCGGCGGCGGAGAACACAGCACTAGAAGGCGGTGCCGACGTCGTCTCCGTCACAGGCGGTGGTCGAGACACGCTTGGACGAAGGCTCATGAGCCTCACTTTCCCCAAACGCAGCGCCGTGATTTCCATTCGAAAATGGCAAGAAGAGGGCCACACTCTTCGCAAGTACGAGCTCAATCGCATCGTTCGGGAGCTTCGCAAGCTCAAGCGCTACAAGCACGCACTTGAGGTATTCAATTCCCTTTTTCCCTTCTTATGTGAAAACTCATGTAATGTAATGTAACCAATGCGCGAGATCATGTATTATACTGATTTTTTTATCTGAAGGAGCTCATATTCTACTTGTGCTGTGAATGTGTTCTATTCACTCCATCTCCGCTTGAATGAGTTAGTATCAATTCAACTGATGTTCGTGTTGTTCATCATTTCTAGCATCTGTTTAATTTAGTCTCAGTCAAGTGGACTAGCTTTCGAAAGGGTATCCTGATTATATTGAATTGTACGATATCCAGAAGCTGATCATTTAAGGCAACTTTAATCATACGTTCTTTTAACACTTTGAGAGCTTGTATACTTGGAGTCCCTTTTTCGTAAGGGAGTATTTTTTTTTGCAGGCTTGGTTTTTTGTGTTTCCGTAGTTTTTTGTATGTCCGTGTATTCTTTCTTTTTTTATCCCTATGGGTGTTGTTCTTAAAAACAAAAAAGAAAATAAATAAAAAATAAAAACTTAACTTGGAGAGCTTGGAAATTAGGTCAAGATACTGTACATATGAAACCAAAGATATGACTGCAAAAAGGATGTTGCAGTGATTTGCTGGCCTTTCTTTAGTACTAGATTAAATGAAGACTATCAAAAAGCTTTGGCCCATTTGATAACTATTTCGCTATTGGTTTTGGGTTTTTGAAAATTAAGTCTATTTCCTCTCATTTTCTTACCATGATAAAAGAGTTGAATTCTTAGCTAAATTCCAAAAACAAAAACTACTTTTTTTAGTTTTAAAAAATTAGCTTGGTTTTTGTAAAAATTGGTAGAAAGTAGATAACAAAATAATAAATTTAGAGGTGGAAGAGGTGTTTGTAGGCTTAATTTTCAAAAACTAAAAACTAAAAAAACCAAATGGTTACCAAACGGGGCCTTAGATAGATAGGTTAGGGTGAACCCAGAGATACTGAAATATAATTTCAATGAATATTTTGCTTTATTTCCTATAAAAAGTAAATAGATGAATAAAATCCTCTGACATGACCTTGAACCTTGTAGATTGTATGATCTGAAGATGGCCTTGAGCCTTGAGTAATCTTTCTTGAGCATTTCCACCGTGCAGGTGTGTGAATGGATGACATTACAGAAAGATATGAAGTTGCTACCTGGTGACTATGCAGTTCATCTGGATTTGATTGCAAAAATCCGAGGCCTGAATAGCGCAGAAAAGTTTTTTGAAGATCTCCCTGATAAAATGAGAGATCAATCAGCCTGCACAGCTCTTCTTCACGTGTACGTTCAAAATAATCTATCTGAAAAGGCTGAGGCTTTAATGGAGAAAATGTCTGAATGTGGTTTCTTAAAAAGTCCTCTTTCTTTCAACCACATGCTATCTCTTCACATCTCAAACAAGCAACTAGAGAAGGTTCCTGATCTGATTCAAGTATTAAAGAAGAACACCAAACCAGATGTGGTAACATATAATCTTTTGTTGAATGTTTGCACTTTGCAAAATGACGTTGAAGCTGCAGAAAGCATTTTCCTTGAGATGAAGAAGACGAAAACCGAACCAGATTGGGTATCATTTAGCACATTAGCTAACTTGTATTCCAAAAAACAACTTACCGAAAAAGCAGCGTCTACGTTGAAGGAGATGGAGAAAATGGCATCTCAAAGAAACAGAATCTCATTTTCGTCTCTTCTTAGCTTGTATACCAATTTGGGGGATAAGAATGGAGTTTACAGAATATGGAAAAAGATGAAGTCATTGTTTCGCAAGATGAGTGATAGTGAGTACACTTGCATGATATCCTCTCTTGTGAAACTTAATGAGCTTGGGGAAGCTGAGAAACTATATACCGAATGGGAGTCAGTATCCGGGACGGGTGATACTCGGGTTCCAAATATATTGCTTGCAGCGTATATCAACAAAAACCAAATGGAACAAGCCGAGAGTTTCTACAATCGGATGTCACTAAAAGGAATAGTTCCATCTTACACTACTTGGGAGCTCCTTACATGGGGTTATTTGAAAGAGAACCAGATGGAGAAAGTGCTGCATTTCTTCAAGAATGCAGTTGGCAGCGTGAAGAAATGGAATGCGGACGAGAGGTTGGTTAAAGGAGTCTGTAAGAAACTCGAGGAGCAGGGTAACATTGAAGGGGCAGAGCAGTTGTTGATTATTCTTAGGAATGCTGGTCATGTGGATACTGAGATATACAATTCTCTCTTGCGGACCTATGCAAAAGCTGGTAAAATGCCACTTGTTGTTGCTGAAAGAATGGAAATGGACAACGTTCAGTTGAACGACGAGACTCGAGAGTTTCTAAGGTTGACCAGCAAGATGTGTGTGAGTGAAGTTTCAAGCACTTTATTCTACAAAACTGATCAAACCAACTCAATTCAATCCGTTTGA

mRNA sequence

CCGTCGTTTATCATCACCGCCACTTTACTTTAGTTCCTCACCTTCGTTTCAAAACTTGACCACGATGTTCCGCTCGTTGCGGCCTTCTCTAGCGACGGCCGCCGCCCGCAGATTTTCCGGGGAAGCCCACAAGGCGGCGGCGGAGAACACAGCACTAGAAGGCGGTGCCGACGTCGTCTCCGTCACAGGCGGTGGTCGAGACACGCTTGGACGAAGGCTCATGAGCCTCACTTTCCCCAAACGCAGCGCCGTGATTTCCATTCGAAAATGGCAAGAAGAGGGCCACACTCTTCGCAAGTACGAGCTCAATCGCATCGTTCGGGAGCTTCGCAAGCTCAAGCGCTACAAGCACGCACTTGAGGTGTGTGAATGGATGACATTACAGAAAGATATGAAGTTGCTACCTGGTGACTATGCAGTTCATCTGGATTTGATTGCAAAAATCCGAGGCCTGAATAGCGCAGAAAAGTTTTTTGAAGATCTCCCTGATAAAATGAGAGATCAATCAGCCTGCACAGCTCTTCTTCACGTGTACGTTCAAAATAATCTATCTGAAAAGGCTGAGGCTTTAATGGAGAAAATGTCTGAATGTGGTTTCTTAAAAAGTCCTCTTTCTTTCAACCACATGCTATCTCTTCACATCTCAAACAAGCAACTAGAGAAGGTTCCTGATCTGATTCAAGTATTAAAGAAGAACACCAAACCAGATGTGGTAACATATAATCTTTTGTTGAATGTTTGCACTTTGCAAAATGACGTTGAAGCTGCAGAAAGCATTTTCCTTGAGATGAAGAAGACGAAAACCGAACCAGATTGGGTATCATTTAGCACATTAGCTAACTTGTATTCCAAAAAACAACTTACCGAAAAAGCAGCGTCTACGTTGAAGGAGATGGAGAAAATGGCATCTCAAAGAAACAGAATCTCATTTTCGTCTCTTCTTAGCTTGTATACCAATTTGGGGGATAAGAATGGAGTTTACAGAATATGGAAAAAGATGAAGTCATTGTTTCGCAAGATGAGTGATAGTGAGTACACTTGCATGATATCCTCTCTTGTGAAACTTAATGAGCTTGGGGAAGCTGAGAAACTATATACCGAATGGGAGTCAGTATCCGGGACGGGTGATACTCGGGTTCCAAATATATTGCTTGCAGCGTATATCAACAAAAACCAAATGGAACAAGCCGAGAGTTTCTACAATCGGATGTCACTAAAAGGAATAGTTCCATCTTACACTACTTGGGAGCTCCTTACATGGGGTTATTTGAAAGAGAACCAGATGGAGAAAGTGCTGCATTTCTTCAAGAATGCAGTTGGCAGCGTGAAGAAATGGAATGCGGACGAGAGGTTGGTTAAAGGAGTCTGTAAGAAACTCGAGGAGCAGGGTAACATTGAAGGGGCAGAGCAGTTGTTGATTATTCTTAGGAATGCTGGTCATGTGGATACTGAGATATACAATTCTCTCTTGCGGACCTATGCAAAAGCTGGTAAAATGCCACTTGTTGTTGCTGAAAGAATGGAAATGGACAACGTTCAGTTGAACGACGAGACTCGAGAGTTTCTAAGGTTGACCAGCAAGATGTGTGTGAGTGAAGTTTCAAGCACTTTATTCTACAAAACTGATCAAACCAACTCAATTCAATCCGTTTGA

Coding sequence (CDS)

ATGTTCCGCTCGTTGCGGCCTTCTCTAGCGACGGCCGCCGCCCGCAGATTTTCCGGGGAAGCCCACAAGGCGGCGGCGGAGAACACAGCACTAGAAGGCGGTGCCGACGTCGTCTCCGTCACAGGCGGTGGTCGAGACACGCTTGGACGAAGGCTCATGAGCCTCACTTTCCCCAAACGCAGCGCCGTGATTTCCATTCGAAAATGGCAAGAAGAGGGCCACACTCTTCGCAAGTACGAGCTCAATCGCATCGTTCGGGAGCTTCGCAAGCTCAAGCGCTACAAGCACGCACTTGAGGTGTGTGAATGGATGACATTACAGAAAGATATGAAGTTGCTACCTGGTGACTATGCAGTTCATCTGGATTTGATTGCAAAAATCCGAGGCCTGAATAGCGCAGAAAAGTTTTTTGAAGATCTCCCTGATAAAATGAGAGATCAATCAGCCTGCACAGCTCTTCTTCACGTGTACGTTCAAAATAATCTATCTGAAAAGGCTGAGGCTTTAATGGAGAAAATGTCTGAATGTGGTTTCTTAAAAAGTCCTCTTTCTTTCAACCACATGCTATCTCTTCACATCTCAAACAAGCAACTAGAGAAGGTTCCTGATCTGATTCAAGTATTAAAGAAGAACACCAAACCAGATGTGGTAACATATAATCTTTTGTTGAATGTTTGCACTTTGCAAAATGACGTTGAAGCTGCAGAAAGCATTTTCCTTGAGATGAAGAAGACGAAAACCGAACCAGATTGGGTATCATTTAGCACATTAGCTAACTTGTATTCCAAAAAACAACTTACCGAAAAAGCAGCGTCTACGTTGAAGGAGATGGAGAAAATGGCATCTCAAAGAAACAGAATCTCATTTTCGTCTCTTCTTAGCTTGTATACCAATTTGGGGGATAAGAATGGAGTTTACAGAATATGGAAAAAGATGAAGTCATTGTTTCGCAAGATGAGTGATAGTGAGTACACTTGCATGATATCCTCTCTTGTGAAACTTAATGAGCTTGGGGAAGCTGAGAAACTATATACCGAATGGGAGTCAGTATCCGGGACGGGTGATACTCGGGTTCCAAATATATTGCTTGCAGCGTATATCAACAAAAACCAAATGGAACAAGCCGAGAGTTTCTACAATCGGATGTCACTAAAAGGAATAGTTCCATCTTACACTACTTGGGAGCTCCTTACATGGGGTTATTTGAAAGAGAACCAGATGGAGAAAGTGCTGCATTTCTTCAAGAATGCAGTTGGCAGCGTGAAGAAATGGAATGCGGACGAGAGGTTGGTTAAAGGAGTCTGTAAGAAACTCGAGGAGCAGGGTAACATTGAAGGGGCAGAGCAGTTGTTGATTATTCTTAGGAATGCTGGTCATGTGGATACTGAGATATACAATTCTCTCTTGCGGACCTATGCAAAAGCTGGTAAAATGCCACTTGTTGTTGCTGAAAGAATGGAAATGGACAACGTTCAGTTGAACGACGAGACTCGAGAGTTTCTAAGGTTGACCAGCAAGATGTGTGTGAGTGAAGTTTCAAGCACTTTATTCTACAAAACTGATCAAACCAACTCAATTCAATCCGTTTGA

Protein sequence

MFRSLRPSLATAAARRFSGEAHKAAAENTALEGGADVVSVTGGGRDTLGRRLMSLTFPKRSAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYAVHLDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPDLIQVLKKNTKPDVVTYNLLLNVCTLQNDVEAAESIFLEMKKTKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQRNRISFSSLLSLYTNLGDKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLYTEWESVSGTGDTRVPNILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAVGSVKKWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLVVAERMEMDNVQLNDETREFLRLTSKMCVSEVSSTLFYKTDQTNSIQSV
BLAST of Lsi02G022980 vs. Swiss-Prot
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 8.7e-178
Identity = 320/529 (60.49%), Postives = 409/529 (77.32%), Query Frame = 1

Query: 1   MFRSLRPSLATAAARRFSGEAHKAAAENTAL-----------EGG--ADVVSVTGGGRDT 60
           + RS RP+LA+   R FS  A  AA  +TA            +GG  A+      GGRDT
Sbjct: 6   LVRSARPTLASIH-RLFSAAA--AATVDTATAPVVKPRSGGGKGGESANKKETVVGGRDT 65

Query: 61  LGRRLMSLTFPKRSAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMTLQ 120
           LG RL+SL + KRSAV++IRKW+EEGH++RKYELNRIVRELRK+KRYKHALE+CEWM +Q
Sbjct: 66  LGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQ 125

Query: 121 KDMKLLPGDYAVHLDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEKAE 180
           +D+KL  GDYAVHLDLI+KIRGLNSAEKFFED+PD+MR  +ACT+LLH YVQN LS+KAE
Sbjct: 126 EDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAE 185

Query: 181 ALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPDLIQVLKKNTKPDVVTYNLLLNVCT 240
           AL EKM ECGFLKS L +NHMLS++IS  Q EKVP LI+ LK  T PD+VTYNL L    
Sbjct: 186 ALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFA 245

Query: 241 LQNDVEAAESIFLEMKKTKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQRNRI 300
             NDVE AE ++L+ K+ K  PDWV++S L NLY+K    EKA   LKEMEK+ S++NR+
Sbjct: 246 SGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRV 305

Query: 301 SFSSLLSLYTNLGDKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLYTEW 360
           +++SL+SL+ NLGDK+GV   WKK+KS F+KM+D+EY  MIS++VKL E  +A+ LY EW
Sbjct: 306 AYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEW 365

Query: 361 ESVSGTGDTRVPNILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQM 420
           ESVSGTGD R+PN++LA Y+N++++   E FY R+  KGI PSY+TWE+LTW YLK   M
Sbjct: 366 ESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDM 425

Query: 421 EKVLHFFKNAVGSVKKWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEIYNS 480
           EKVL  F  A+ SVKKW  + RLVKG CK+LEEQGN++GAE+L+ +L+ AG+V+T++YNS
Sbjct: 426 EKVLDCFGKAIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNS 485

Query: 481 LLRTYAKAGKMPLVVAERMEMDNVQLNDETREFLRLTSKMCVSEVSSTL 517
           LLRTYAKAG+M L+V ERM  DNV+L++ET+E +RLTS+M V+E+SST+
Sbjct: 486 LLRTYAKAGEMALIVEERMAKDNVELDEETKELIRLTSQMRVTEISSTI 531

BLAST of Lsi02G022980 vs. Swiss-Prot
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 273.9 bits (699), Expect = 3.8e-72
Identity = 149/425 (35.06%), Postives = 252/425 (59.29%), Query Frame = 1

Query: 50  RRLMSLTFPKRSAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMTLQKD 109
           +++  +  P+  A   + +W++ G  L K+EL R+V+ELRK KR   ALEV +WM  + +
Sbjct: 71  KKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGE 130

Query: 110 -MKLLPGDYAVHLDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEKAEA 169
             +L   D A+ LDLI K+RG+  AE+FF  LP+  +D+    +LL+ YV+    EKAEA
Sbjct: 131 RFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEA 190

Query: 170 LMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPDLIQVLK-KNTKPDVVTYNLLLNVCT 229
           L+  M + G+   PL FN M++L+++ ++ +KV  ++  +K K+ + D+ +YN+ L+ C 
Sbjct: 191 LLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCG 250

Query: 230 LQNDVEAAESIFLEMKK-TKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQRNR 289
               VE  E ++ +MK      P+W +FST+A +Y K   TEKA   L+++E   + RNR
Sbjct: 251 SLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNR 310

Query: 290 ISFSSLLSLYTNLGDKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLYTE 349
           I +  LLSLY +LG+K  +YR+W   KS+   + +  Y  ++SSLV++ ++  AEK+Y E
Sbjct: 311 IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEE 370

Query: 350 WESVSGTGDTRVPNILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQ 409
           W  V  + D R+PN+L+ AY+  +Q+E AE  ++ M   G  PS +TWE+L  G+ ++  
Sbjct: 371 WLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRC 430

Query: 410 MEKVLHFFKNAVGS--VKKWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEI 469
           + + L   +NA  +     W     ++ G  K  EE+ ++   E +L +LR +G ++ + 
Sbjct: 431 ISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKS 490

BLAST of Lsi02G022980 vs. Swiss-Prot
Match: PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.5e-71
Identity = 166/471 (35.24%), Postives = 267/471 (56.69%), Query Frame = 1

Query: 29  TALEGGADVVSVTGGGRDTLGRRLMSLTFPKRSAVISIRKWQEEGHTLRKYELNRIVREL 88
           ++L  G+D  SV    R++L + ++    P+RS    +++  + GH +   EL  I + L
Sbjct: 24  SSLADGSDTSSVAN--RNSL-KEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRL 83

Query: 89  RKLKRYKHALEVCEWMTLQKDMKLLPGDYAVHLDLIAKIRGLNSAEKFFEDLPDK---MR 148
            +  RY  AL++ EWM  QKD++    D A+ LDLI K  GL   E++FE L      MR
Sbjct: 84  IRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMR 143

Query: 149 -DQSACTALLHVYVQNNLSEKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPDL 208
             +SA   LL  YV+N + ++AEALMEK++  GFL +P  FN M+ L+ ++ Q EKV  +
Sbjct: 144 VAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMV 203

Query: 209 IQVLKKNTKP-DVVTYNLLLNVCTLQNDVEAAESIFLEMKKTKT-EPDWVSFSTLANLYS 268
           + ++K N  P +V++YNL +N C   + V A E+++ EM   K+ E  W S  TLAN+Y 
Sbjct: 204 VSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYI 263

Query: 269 KKQLTEKAASTLKEMEKMASQRNRISFSSLLSLYTNLGDKNGVYRIWKKMKSLFRKMSDS 328
           K    EKA   L++ EKM ++ NR+ +  L++LY +LG+K GV R+W+  KS+  ++S  
Sbjct: 264 KSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCV 323

Query: 329 EYTCMISSLVKLNELGEAEKLYTEWESVSGTGDTRVPNILLAAYINKNQMEQAESFYNRM 388
            Y C++SSLVK  +L EAE++++EWE+     D RV N+LL AY+   ++ +AES +  +
Sbjct: 324 NYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCV 383

Query: 389 SLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAVGSVKK--WNADERLVKGVCKKLEE 448
             +G  P+Y TWE+L  G++K   MEK +         +++  W     +V  + +  E+
Sbjct: 384 LERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEK 443

Query: 449 QGNIEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLVVAERMEMDNV 492
           +  IE A   +  L   G     +Y  LLR +  A +    + E M++D +
Sbjct: 444 EEKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLDKL 491

BLAST of Lsi02G022980 vs. Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.7e-67
Identity = 147/431 (34.11%), Postives = 240/431 (55.68%), Query Frame = 1

Query: 78  KYELNRIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYAVHLDLIAKIRGLNSAEKFF 137
           K+E+   +++LR    Y  AL++ E M  ++ M     D A+HLDL+AK R + + E +F
Sbjct: 55  KWEVGDTIKKLRNRGLYYPALKLSEVME-ERGMNKTVSDQAIHLDLVAKAREITAGENYF 114

Query: 138 EDLPDKMRDQSACTALLHVYVQNNLSEKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQ 197
            DLP+  + +    +LL+ Y +  L+EKAE L+ KM E     S +S+N +++L+    +
Sbjct: 115 VDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGE 174

Query: 198 LEKVPDLIQVLK-KNTKPDVVTYNLLLNVCTLQNDVEAAESIFLEMKKT-KTEPDWVSFS 257
            EKVP +IQ LK +N  PD  TYN+ +      ND+   E +  EM +  +  PDW ++S
Sbjct: 175 TEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYS 234

Query: 258 TLANLYSKKQLTEKAASTLKEMEKMASQRNRISFSSLLSLYTNLGDKNGVYRIWKKMKSL 317
            +A++Y    L++KA   L+E+E   +QR+  ++  L++LY  LG    VYRIW+ ++  
Sbjct: 235 NMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLA 294

Query: 318 FRKMSDSEYTCMISSLVKLNELGEAEKLYTEWESVSGTGDTRVPNILLAAYINKNQMEQA 377
             K S+  Y  MI  LVKLN+L  AE L+ EW++   T D R+ N+L+ AY  +  +++A
Sbjct: 295 IPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKA 354

Query: 378 ESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAV----GSVKKWNADERLV 437
                +   +G   +  TWE+    Y+K   M + L     AV    G   KW      V
Sbjct: 355 NELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETV 414

Query: 438 KGVCKKLEEQGNIEGAEQLLIILRN-AGHVDTEIYNSLLRTYAKAGKMPLVVAERMEMDN 497
           + +    E++ ++ GAE LL IL+N   ++  EI+  L+RTYA AGK    +  R++M+N
Sbjct: 415 RALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMEN 474

Query: 498 VQLNDETREFL 502
           V++N+ T++ L
Sbjct: 475 VEVNEATKKLL 484

BLAST of Lsi02G022980 vs. Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.4e-63
Identity = 148/435 (34.02%), Postives = 239/435 (54.94%), Query Frame = 1

Query: 46  DTLGRRLMSLTFPKRSAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMT 105
           DTL RR+     P  S +  +  W ++G+ ++  EL+ I++ LRK  R+ HAL++ +WM+
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 106 LQKDMKLLPGDYAVHLDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEK 165
             +  ++  GD A+ LDLIAK+ GL  AEKFFE +P + R+     ALL+ Y    +  K
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 166 AEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPDLIQVLKKNT-KPDVVTYNLLLN 225
           AE + ++M E GFLK  L +N ML+L++   +   V  L++ ++  T KPD+ T N  L+
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 226 VCTLQNDVEAAESIFLEMKKTK-TEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMA-S 285
             ++ +DVE  E   +  +  +    DW +++  AN Y K  LTEKA   L++ E+M  +
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 277

Query: 286 QRNRISFSSLLSLYTNLGDKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEK 345
           Q+ + ++  L+S Y   G K  VYR+W   K L     ++ Y  +IS+L+K++++ E EK
Sbjct: 278 QKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDDIEEVEK 337

Query: 346 LYTEWESVSGTGDTRVPNILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYL 405
           +  EWE+     D R+P++L+  Y  K  ME+AE   N +  K  V   +TWE L  GY 
Sbjct: 338 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 397

Query: 406 KENQMEKVLHFFKNAVGSVKK-WNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVD 465
              +MEK +  +K A+   K  W   + ++      LE Q ++EG  ++L +L   GH+ 
Sbjct: 398 MAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS 457

Query: 466 TEIYNSLLRTYAKAG 477
              Y+ LL     AG
Sbjct: 458 ---YDQLLYDMNGAG 468

BLAST of Lsi02G022980 vs. TrEMBL
Match: A0A0A0K7E2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390000 PE=4 SV=1)

HSP 1 Score: 892.5 bits (2305), Expect = 2.5e-256
Identity = 460/530 (86.79%), Postives = 483/530 (91.13%), Query Frame = 1

Query: 1   MFRSLRPSLATAAARRFSGEAHKAAAENTALEG--GADVVSVTGGGRDTLGRRLMSLTFP 60
           MFRS RPSLATAAARRFSGEA  AA+ENTALEG  G  VVS  GGGRDTLGRRLMSL FP
Sbjct: 1   MFRSFRPSLATAAARRFSGEASMAASENTALEGAAGTRVVSGKGGGRDTLGRRLMSLIFP 60

Query: 61  KRSAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYA 120
           KRSAV +IRKWQEEG T+RKYELNR VRELRKLKRYKHALEVCEWMTLQKDM+L+PGDYA
Sbjct: 61  KRSAVTAIRKWQEEGRTVRKYELNRNVRELRKLKRYKHALEVCEWMTLQKDMRLVPGDYA 120

Query: 121 VHLDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEKAEALMEKMSECGF 180
           VHLDLI KIRGLN AEKFFEDLPDK+R+QS CT+LLH YVQNNLSEKAEALMEKMSECGF
Sbjct: 121 VHLDLICKIRGLNRAEKFFEDLPDKIREQSVCTSLLHAYVQNNLSEKAEALMEKMSECGF 180

Query: 181 LKSPLSFNHMLSLHISNKQLEKVPDLIQVLKKNTKPDVVTYNLLLNVCTLQNDVEAAESI 240
           LKSPLSFNHMLSLHISNKQLEKVP LI+ LKKNTKPDVVTYNLLLNVCTLQND EAAE+I
Sbjct: 181 LKSPLSFNHMLSLHISNKQLEKVPALIEGLKKNTKPDVVTYNLLLNVCTLQNDTEAAENI 240

Query: 241 FLEMKKTKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQRNRISFSSLLSLYTN 300
           FLEMKKTK +PDWVSFSTLANLY K QLTEKAA+TLKEMEKMA + NR+S SSLLSLYTN
Sbjct: 241 FLEMKKTKIQPDWVSFSTLANLYCKNQLTEKAAATLKEMEKMAFKSNRLSLSSLLSLYTN 300

Query: 301 LGDKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLYTEWESVSGTGDTRV 360
           LGDKN VYRIWKK+KS FRKMSD EY CMISSLVKLNEL EAEKLYTEWESVSGT DTRV
Sbjct: 301 LGDKNEVYRIWKKLKSSFRKMSDREYMCMISSLVKLNELEEAEKLYTEWESVSGTRDTRV 360

Query: 361 PNILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAV 420
            N++L AYI KNQ+EQAESFYNRM  KG VPSYTTWELLTWGYLKENQMEKVLHFF+ AV
Sbjct: 361 SNVMLGAYIKKNQIEQAESFYNRMLQKGTVPSYTTWELLTWGYLKENQMEKVLHFFRKAV 420

Query: 421 GSVKKWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKM 480
             VKKWNADERLVKGVCKKLEEQGNI G EQLL+ILRNAGHVDTEIYNSLLRTYAKAGKM
Sbjct: 421 NRVKKWNADERLVKGVCKKLEEQGNINGVEQLLLILRNAGHVDTEIYNSLLRTYAKAGKM 480

Query: 481 PLVVAERMEMDNVQLNDETREFLRLTSKMCVSEVSSTLFYKTDQTNSIQS 529
           PL+VAERME DNVQLNDETRE LRLTSKMCVSEVSSTL+ KTDQ +SIQS
Sbjct: 481 PLIVAERMERDNVQLNDETRELLRLTSKMCVSEVSSTLYDKTDQMDSIQS 530

BLAST of Lsi02G022980 vs. TrEMBL
Match: M5VTF8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004422mg PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 5.8e-205
Identity = 364/510 (71.37%), Postives = 426/510 (83.53%), Query Frame = 1

Query: 3   RSLRPSLATAAARRFSGEAHKAAAENTALEGGADVVSVTGGGRDTLGRRLMSLTFPKRSA 62
           R+LR S+A  A R F+ EAH      TA      V   + GGRDTLGRRLMSL FPKRSA
Sbjct: 4   RTLRSSIA--AVRHFTAEAHVETKAATA-----SVEKSSSGGRDTLGRRLMSLVFPKRSA 63

Query: 63  VISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYAVHLD 122
           VI+IRKW+EEGH +RKYELNRIVRELRKLKRYKHALE+CEWMTLQ+DMKLLPGDYAVHLD
Sbjct: 64  VIAIRKWKEEGHKVRKYELNRIVRELRKLKRYKHALEICEWMTLQQDMKLLPGDYAVHLD 123

Query: 123 LIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEKAEALMEKMSECGFLKSP 182
           LIAK+RGLNSAEKFFEDLPD+M     CTALLH YVQN LS+KAEALM KMS+CG++K P
Sbjct: 124 LIAKVRGLNSAEKFFEDLPDQMTGHPTCTALLHTYVQNKLSDKAEALMAKMSQCGYMKHP 183

Query: 183 LSFNHMLSLHISNKQLEKVPDLIQVLKKNTKPDVVTYNLLLNVCTLQNDVEAAESIFLEM 242
           L++NHMLSL++SN Q +KVP++IQ LK NT PDVVTYNL L VC  Q+DVE AE +FLE+
Sbjct: 184 LAYNHMLSLYVSNGQFDKVPEVIQELKSNTSPDVVTYNLWLTVCASQSDVETAEKVFLEL 243

Query: 243 KKTKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQRNRISFSSLLSLYTNLGDK 302
           KK K  PDWV+FSTL NLY K  LTEKAA TLKEMEK+AS++NR ++SSLLSL+TN+GD+
Sbjct: 244 KKAKLNPDWVTFSTLTNLYIKSLLTEKAAVTLKEMEKIASRKNRAAYSSLLSLHTNIGDE 303

Query: 303 NGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLYTEWESVSGTGDTRVPNIL 362
           +GV+RIWKKMKS FRKM+D+EYTCM+SSLVKL E  EAEKLYTEWESVS T D RV NIL
Sbjct: 304 DGVWRIWKKMKSCFRKMNDAEYTCMLSSLVKLKEFEEAEKLYTEWESVSETHDARVSNIL 363

Query: 363 LAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAVGSVK 422
           LAAYINK+QME AE+F+NRM   GI P Y+TWELLTWG+LK+   EKVL  FK AVGSVK
Sbjct: 364 LAAYINKDQMEMAETFHNRMVQNGITPCYSTWELLTWGFLKQKHTEKVLDNFKKAVGSVK 423

Query: 423 KWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLVV 482
           +W+ D+RL+  V  +L+E+GNI+GAE+LL+ LRNAGHV TEIYNS+LRTYA+AGKMPL+V
Sbjct: 424 RWDPDKRLIGEVFNRLKEEGNIKGAEELLLFLRNAGHVSTEIYNSVLRTYAEAGKMPLIV 483

Query: 483 AERMEMDNVQLNDETREFLRLTSKMCVSEV 513
           AERME DNVQL++ETR  ++LTS MCVSEV
Sbjct: 484 AERMEKDNVQLDEETRRLIKLTSTMCVSEV 506

BLAST of Lsi02G022980 vs. TrEMBL
Match: F6HEI3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02800 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 2.8e-199
Identity = 348/474 (73.42%), Postives = 406/474 (85.65%), Query Frame = 1

Query: 41  TGGGRDTLGRRLMSLTFPKRSAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEV 100
           T  GRDTLGRRL+SL + KRSAVI+I++W+EEGHT+RKYELNRIVRELRKLKRYKHALE+
Sbjct: 20  TSSGRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEI 79

Query: 101 CEWMTLQKDMKLLPGDYAVHLDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQN 160
           CEWMT Q D+KLL GDYAVHLDLIAKIRGL SAEKFFEDL DKM+ Q  CTALLH YVQN
Sbjct: 80  CEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQN 139

Query: 161 NLSEKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPDLIQVLKKNTKPDVVTYN 220
            +SEKAEALMEKMSECGFLK PL +NHM+SL+IS+ QLEKVP +IQ LKKNT PDVVTYN
Sbjct: 140 KVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYN 199

Query: 221 LLLNVCTLQNDVEAAESIFLEMKKTKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKM 280
           L L VC  QNDVE AE + LE+KK K +PDWV++S+L NLY KK L +KAA+TL EMEK 
Sbjct: 200 LWLTVCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKR 259

Query: 281 ASQRNRISFSSLLSLYTNLGDKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEA 340
            S++ RI++SSL+SL+TN+ DK+GV+RIWKK+KS+F KM+D+EYTCMISSLVKL E  EA
Sbjct: 260 TSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEA 319

Query: 341 EKLYTEWESVSGTGDTRVPNILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWG 400
           E LY+EW SVS TGD+RVPNILLAAYINKN+ME AE FYN+M  +GI PSYTTWELLTWG
Sbjct: 320 ENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWG 379

Query: 401 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHV 460
           YLK+ QMEKVL +F+ AVGSVKKWN DE+LV+ V K LEEQGNIEGAE++L+ILR AGHV
Sbjct: 380 YLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHV 439

Query: 461 DTEIYNSLLRTYAKAGKMPLVVAERMEMDNVQLNDETREFLRLTSKMCVSEVSS 515
            TEIYN LLR YAKAGKMPL+VAE M+ D V++++ET   ++ TSKMCVSEVSS
Sbjct: 440 STEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMCVSEVSS 493

BLAST of Lsi02G022980 vs. TrEMBL
Match: A0A061DRS7_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_004398 PE=4 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 6.9e-198
Identity = 358/516 (69.38%), Postives = 420/516 (81.40%), Query Frame = 1

Query: 1   MFRSLRPSLATAAARRFSGEAHKAAAENTALEGGADVVSVTGGGRDTLGRRLMSLTFPKR 60
           + R +R SL+  AAR FS EA  AA +  A   GA  V   GG RDTLG RL+ L +PKR
Sbjct: 2   LIRYVRASLS--AARFFSAEATSAAEKAIATTEGA--VKSGGGSRDTLGWRLIGLVYPKR 61

Query: 61  SAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYAVH 120
           SAV++IRKWQEEG T+RKYELNR+VRELRKLKRYKHALE+CEWM LQ+D+KLLPGDYAVH
Sbjct: 62  SAVVTIRKWQEEGRTVRKYELNRVVRELRKLKRYKHALEICEWMRLQQDIKLLPGDYAVH 121

Query: 121 LDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEKAEALMEKMSECGFLK 180
           LDLIAK+RGL SAEKFFEDLPD+MR Q+ CTALLH YVQN L  KAE LM+KMSECGF+K
Sbjct: 122 LDLIAKVRGLASAEKFFEDLPDQMRGQATCTALLHTYVQNKLFAKAETLMKKMSECGFVK 181

Query: 181 SPLSFNHMLSLHISNKQLEKVPDLIQVLKKNTKPDVVTYNLLLNVCTLQNDVEAAESIFL 240
            PL FNHMLSL+IS  QLEKVP ++Q LKKNT PD+VTYNLLL+VC  QN +E AE I  
Sbjct: 182 CPLPFNHMLSLYISEGQLEKVPGIVQELKKNTSPDIVTYNLLLSVCASQNKIETAEEILH 241

Query: 241 EMKKTKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQRNRISFSSLLSLYTNLG 300
           ++KK K +PDW++ S L NLY + +  EKA STLK+MEK AS++NR+++SSLLSL+TN+G
Sbjct: 242 DLKKAKIDPDWMTCSALTNLYIRGKEFEKATSTLKDMEKKASRKNRVAYSSLLSLHTNMG 301

Query: 301 DKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLYTEWESVSGTGDTRVPN 360
           DK+GV RIWKKMKS FRKM+D+EYTCMISSLVKL +  EAE LY EWESVSG+ D RVPN
Sbjct: 302 DKDGVQRIWKKMKSCFRKMNDAEYTCMISSLVKLGDFEEAEILYNEWESVSGSADARVPN 361

Query: 361 ILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAVGS 420
           ILLAAYIN+ +ME AE FY R+  KGI P YTTWELLTWGYLK  ++EKVL  F+ AVGS
Sbjct: 362 ILLAAYINQERMEIAEDFYERIVQKGISPCYTTWELLTWGYLKNQRIEKVLDCFERAVGS 421

Query: 421 VKKWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPL 480
           V+KWN ++RLV  V KKLEE GN EG E+LL+ILRNAGHV T++YNSLLR YAKAGKMPL
Sbjct: 422 VRKWNPNDRLVGEVFKKLEELGNTEGVEKLLVILRNAGHVSTKVYNSLLRAYAKAGKMPL 481

Query: 481 VVAERMEMDNVQLNDETREFLRLTSKMCVSEVSSTL 517
           +VAERM  DNV L++ET E + LTSKMCVSEVSS+L
Sbjct: 482 IVAERMRKDNVPLDEETHELINLTSKMCVSEVSSSL 513

BLAST of Lsi02G022980 vs. TrEMBL
Match: A5ALW8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037299 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 8.5e-196
Identity = 356/524 (67.94%), Postives = 417/524 (79.58%), Query Frame = 1

Query: 1   MFRSLRPSLATAAARRFSGEAH----------------KAAAENTALEGGADVVSVTGGG 60
           MFR  R   A AA R FS E                  KA  +    +G +     T  G
Sbjct: 1   MFRQ-RVHTALAAVRHFSAEVATMKPLTTMKPMAIVKPKAVVKPKTSDGNS-----TSSG 60

Query: 61  RDTLGRRLMSLTFPKRSAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWM 120
           RDTLGRRL+SL + KRSAVI+I++W+EEGHT+RKYELNRIVRELRKLKRYKHALE+CEWM
Sbjct: 61  RDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWM 120

Query: 121 TLQKDMKLLPGDYAVHLDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSE 180
           T Q D+KLL GDYAVHLDLIAKIRGL SAEKFFEDL DKM+ Q  CTALLH YVQN +SE
Sbjct: 121 TKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSE 180

Query: 181 KAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPDLIQVLKKNTKPDVVTYNLLLN 240
           KAEALMEKMSECGFLK PL +NHM+SL+IS+ QLEKVP +IQ LKKNT PDVVTYNL L 
Sbjct: 181 KAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNLWLT 240

Query: 241 VCTLQNDVEAAESIFLEMKKTKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQR 300
           VC  QNDVE AE + LE+KK K +PDWV++S+L NLY KK L +KAA+TL EMEK  S++
Sbjct: 241 VCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRK 300

Query: 301 NRISFSSLLSLYTNLGDKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLY 360
            RI++SSL+SL+TN+ DK+GV+RIWKK+KS+F KM+D+EYTCMISSLVKL E  EAE LY
Sbjct: 301 GRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLY 360

Query: 361 TEWESVSGTGDTRVPNILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKE 420
           +EW SVS TGD+RVPNILLAAYINKN+ME AE FYN+M  +GI PSYTTWELLTWGYLK+
Sbjct: 361 SEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKK 420

Query: 421 NQMEKVLHFFKNAVGSVKKWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEI 480
            QMEKVL +F+ AVGSVKKWN DE+LV+ V K LEEQGNIEGAE++L+ILR AGHV TEI
Sbjct: 421 KQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEI 480

Query: 481 YNSLLRTYAKAGKMPLVVAERMEMDNVQLNDETREFLRLTSKMC 509
           YN LLR YAKAGKMPL+VAE M+ D V++++ET   ++ TSKMC
Sbjct: 481 YNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMC 518

BLAST of Lsi02G022980 vs. TAIR10
Match: AT4G02820.1 (AT4G02820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 624.8 bits (1610), Expect = 4.9e-179
Identity = 320/529 (60.49%), Postives = 409/529 (77.32%), Query Frame = 1

Query: 1   MFRSLRPSLATAAARRFSGEAHKAAAENTAL-----------EGG--ADVVSVTGGGRDT 60
           + RS RP+LA+   R FS  A  AA  +TA            +GG  A+      GGRDT
Sbjct: 6   LVRSARPTLASIH-RLFSAAA--AATVDTATAPVVKPRSGGGKGGESANKKETVVGGRDT 65

Query: 61  LGRRLMSLTFPKRSAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMTLQ 120
           LG RL+SL + KRSAV++IRKW+EEGH++RKYELNRIVRELRK+KRYKHALE+CEWM +Q
Sbjct: 66  LGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQ 125

Query: 121 KDMKLLPGDYAVHLDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEKAE 180
           +D+KL  GDYAVHLDLI+KIRGLNSAEKFFED+PD+MR  +ACT+LLH YVQN LS+KAE
Sbjct: 126 EDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAE 185

Query: 181 ALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPDLIQVLKKNTKPDVVTYNLLLNVCT 240
           AL EKM ECGFLKS L +NHMLS++IS  Q EKVP LI+ LK  T PD+VTYNL L    
Sbjct: 186 ALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFA 245

Query: 241 LQNDVEAAESIFLEMKKTKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQRNRI 300
             NDVE AE ++L+ K+ K  PDWV++S L NLY+K    EKA   LKEMEK+ S++NR+
Sbjct: 246 SGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRV 305

Query: 301 SFSSLLSLYTNLGDKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLYTEW 360
           +++SL+SL+ NLGDK+GV   WKK+KS F+KM+D+EY  MIS++VKL E  +A+ LY EW
Sbjct: 306 AYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEW 365

Query: 361 ESVSGTGDTRVPNILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQM 420
           ESVSGTGD R+PN++LA Y+N++++   E FY R+  KGI PSY+TWE+LTW YLK   M
Sbjct: 366 ESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDM 425

Query: 421 EKVLHFFKNAVGSVKKWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEIYNS 480
           EKVL  F  A+ SVKKW  + RLVKG CK+LEEQGN++GAE+L+ +L+ AG+V+T++YNS
Sbjct: 426 EKVLDCFGKAIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNS 485

Query: 481 LLRTYAKAGKMPLVVAERMEMDNVQLNDETREFLRLTSKMCVSEVSSTL 517
           LLRTYAKAG+M L+V ERM  DNV+L++ET+E +RLTS+M V+E+SST+
Sbjct: 486 LLRTYAKAGEMALIVEERMAKDNVELDEETKELIRLTSQMRVTEISSTI 531

BLAST of Lsi02G022980 vs. TAIR10
Match: AT1G02150.1 (AT1G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 273.9 bits (699), Expect = 2.1e-73
Identity = 149/425 (35.06%), Postives = 252/425 (59.29%), Query Frame = 1

Query: 50  RRLMSLTFPKRSAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMTLQKD 109
           +++  +  P+  A   + +W++ G  L K+EL R+V+ELRK KR   ALEV +WM  + +
Sbjct: 71  KKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGE 130

Query: 110 -MKLLPGDYAVHLDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEKAEA 169
             +L   D A+ LDLI K+RG+  AE+FF  LP+  +D+    +LL+ YV+    EKAEA
Sbjct: 131 RFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEA 190

Query: 170 LMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPDLIQVLK-KNTKPDVVTYNLLLNVCT 229
           L+  M + G+   PL FN M++L+++ ++ +KV  ++  +K K+ + D+ +YN+ L+ C 
Sbjct: 191 LLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCG 250

Query: 230 LQNDVEAAESIFLEMKK-TKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQRNR 289
               VE  E ++ +MK      P+W +FST+A +Y K   TEKA   L+++E   + RNR
Sbjct: 251 SLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNR 310

Query: 290 ISFSSLLSLYTNLGDKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLYTE 349
           I +  LLSLY +LG+K  +YR+W   KS+   + +  Y  ++SSLV++ ++  AEK+Y E
Sbjct: 311 IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEE 370

Query: 350 WESVSGTGDTRVPNILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQ 409
           W  V  + D R+PN+L+ AY+  +Q+E AE  ++ M   G  PS +TWE+L  G+ ++  
Sbjct: 371 WLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRC 430

Query: 410 MEKVLHFFKNAVGS--VKKWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEI 469
           + + L   +NA  +     W     ++ G  K  EE+ ++   E +L +LR +G ++ + 
Sbjct: 431 ISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKS 490

BLAST of Lsi02G022980 vs. TAIR10
Match: AT5G27460.1 (AT5G27460.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 270.0 bits (689), Expect = 3.1e-72
Identity = 166/471 (35.24%), Postives = 267/471 (56.69%), Query Frame = 1

Query: 29  TALEGGADVVSVTGGGRDTLGRRLMSLTFPKRSAVISIRKWQEEGHTLRKYELNRIVREL 88
           ++L  G+D  SV    R++L + ++    P+RS    +++  + GH +   EL  I + L
Sbjct: 24  SSLADGSDTSSVAN--RNSL-KEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRL 83

Query: 89  RKLKRYKHALEVCEWMTLQKDMKLLPGDYAVHLDLIAKIRGLNSAEKFFEDLPDK---MR 148
            +  RY  AL++ EWM  QKD++    D A+ LDLI K  GL   E++FE L      MR
Sbjct: 84  IRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMR 143

Query: 149 -DQSACTALLHVYVQNNLSEKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPDL 208
             +SA   LL  YV+N + ++AEALMEK++  GFL +P  FN M+ L+ ++ Q EKV  +
Sbjct: 144 VAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMV 203

Query: 209 IQVLKKNTKP-DVVTYNLLLNVCTLQNDVEAAESIFLEMKKTKT-EPDWVSFSTLANLYS 268
           + ++K N  P +V++YNL +N C   + V A E+++ EM   K+ E  W S  TLAN+Y 
Sbjct: 204 VSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYI 263

Query: 269 KKQLTEKAASTLKEMEKMASQRNRISFSSLLSLYTNLGDKNGVYRIWKKMKSLFRKMSDS 328
           K    EKA   L++ EKM ++ NR+ +  L++LY +LG+K GV R+W+  KS+  ++S  
Sbjct: 264 KSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCV 323

Query: 329 EYTCMISSLVKLNELGEAEKLYTEWESVSGTGDTRVPNILLAAYINKNQMEQAESFYNRM 388
            Y C++SSLVK  +L EAE++++EWE+     D RV N+LL AY+   ++ +AES +  +
Sbjct: 324 NYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCV 383

Query: 389 SLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAVGSVKK--WNADERLVKGVCKKLEE 448
             +G  P+Y TWE+L  G++K   MEK +         +++  W     +V  + +  E+
Sbjct: 384 LERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEK 443

Query: 449 QGNIEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLVVAERMEMDNV 492
           +  IE A   +  L   G     +Y  LLR +  A +    + E M++D +
Sbjct: 444 EEKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLDKL 491

BLAST of Lsi02G022980 vs. TAIR10
Match: AT1G60770.1 (AT1G60770.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 257.3 bits (656), Expect = 2.1e-68
Identity = 147/431 (34.11%), Postives = 240/431 (55.68%), Query Frame = 1

Query: 78  KYELNRIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYAVHLDLIAKIRGLNSAEKFF 137
           K+E+   +++LR    Y  AL++ E M  ++ M     D A+HLDL+AK R + + E +F
Sbjct: 55  KWEVGDTIKKLRNRGLYYPALKLSEVME-ERGMNKTVSDQAIHLDLVAKAREITAGENYF 114

Query: 138 EDLPDKMRDQSACTALLHVYVQNNLSEKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQ 197
            DLP+  + +    +LL+ Y +  L+EKAE L+ KM E     S +S+N +++L+    +
Sbjct: 115 VDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGE 174

Query: 198 LEKVPDLIQVLK-KNTKPDVVTYNLLLNVCTLQNDVEAAESIFLEMKKT-KTEPDWVSFS 257
            EKVP +IQ LK +N  PD  TYN+ +      ND+   E +  EM +  +  PDW ++S
Sbjct: 175 TEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYS 234

Query: 258 TLANLYSKKQLTEKAASTLKEMEKMASQRNRISFSSLLSLYTNLGDKNGVYRIWKKMKSL 317
            +A++Y    L++KA   L+E+E   +QR+  ++  L++LY  LG    VYRIW+ ++  
Sbjct: 235 NMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLA 294

Query: 318 FRKMSDSEYTCMISSLVKLNELGEAEKLYTEWESVSGTGDTRVPNILLAAYINKNQMEQA 377
             K S+  Y  MI  LVKLN+L  AE L+ EW++   T D R+ N+L+ AY  +  +++A
Sbjct: 295 IPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKA 354

Query: 378 ESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAV----GSVKKWNADERLV 437
                +   +G   +  TWE+    Y+K   M + L     AV    G   KW      V
Sbjct: 355 NELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETV 414

Query: 438 KGVCKKLEEQGNIEGAEQLLIILRN-AGHVDTEIYNSLLRTYAKAGKMPLVVAERMEMDN 497
           + +    E++ ++ GAE LL IL+N   ++  EI+  L+RTYA AGK    +  R++M+N
Sbjct: 415 RALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMEN 474

Query: 498 VQLNDETREFL 502
           V++N+ T++ L
Sbjct: 475 VEVNEATKKLL 484

BLAST of Lsi02G022980 vs. TAIR10
Match: AT2G20710.1 (AT2G20710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 245.4 bits (625), Expect = 8.1e-65
Identity = 148/435 (34.02%), Postives = 239/435 (54.94%), Query Frame = 1

Query: 46  DTLGRRLMSLTFPKRSAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMT 105
           DTL RR+     P  S +  +  W ++G+ ++  EL+ I++ LRK  R+ HAL++ +WM+
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 106 LQKDMKLLPGDYAVHLDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEK 165
             +  ++  GD A+ LDLIAK+ GL  AEKFFE +P + R+     ALL+ Y    +  K
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 166 AEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPDLIQVLKKNT-KPDVVTYNLLLN 225
           AE + ++M E GFLK  L +N ML+L++   +   V  L++ ++  T KPD+ T N  L+
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 226 VCTLQNDVEAAESIFLEMKKTK-TEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMA-S 285
             ++ +DVE  E   +  +  +    DW +++  AN Y K  LTEKA   L++ E+M  +
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 277

Query: 286 QRNRISFSSLLSLYTNLGDKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEK 345
           Q+ + ++  L+S Y   G K  VYR+W   K L     ++ Y  +IS+L+K++++ E EK
Sbjct: 278 QKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDDIEEVEK 337

Query: 346 LYTEWESVSGTGDTRVPNILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYL 405
           +  EWE+     D R+P++L+  Y  K  ME+AE   N +  K  V   +TWE L  GY 
Sbjct: 338 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 397

Query: 406 KENQMEKVLHFFKNAVGSVKK-WNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVD 465
              +MEK +  +K A+   K  W   + ++      LE Q ++EG  ++L +L   GH+ 
Sbjct: 398 MAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS 457

Query: 466 TEIYNSLLRTYAKAG 477
              Y+ LL     AG
Sbjct: 458 ---YDQLLYDMNGAG 468

BLAST of Lsi02G022980 vs. NCBI nr
Match: gi|659100982|ref|XP_008451368.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Cucumis melo])

HSP 1 Score: 928.3 bits (2398), Expect = 5.9e-267
Identity = 476/531 (89.64%), Postives = 499/531 (93.97%), Query Frame = 1

Query: 1   MFRSLRPSLATAAARRFSGEAHKAAAENTALEG--GADVVSVTGGGRDTLGRRLMSLTFP 60
           MFRS R SLATAAARRFSGEA  AAAENT++EG  G  VVS  GGGRDTLGRRLMSL FP
Sbjct: 1   MFRSFRSSLATAAARRFSGEACVAAAENTSVEGAAGTGVVSRKGGGRDTLGRRLMSLIFP 60

Query: 61  KRSAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYA 120
           KRSAVI+IRKWQEEGHT+RKYELN IVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYA
Sbjct: 61  KRSAVIAIRKWQEEGHTIRKYELNHIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYA 120

Query: 121 VHLDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEKAEALMEKMSECGF 180
           V LDLIAKIRGLNSAEKFFEDLPDK+R+QS CTALLH YVQ NLSEKAEALMEKMSECGF
Sbjct: 121 VQLDLIAKIRGLNSAEKFFEDLPDKIREQSVCTALLHAYVQKNLSEKAEALMEKMSECGF 180

Query: 181 LKSPLSFNHMLSLHISNKQLEKVPDLIQVLKKNTKPDVVTYNLLLNVCTLQNDVEAAESI 240
           LKSPLSFNHMLSLHISNKQLEKVP LI+VLKKNTKPDVVTYNLLLNVCTLQND EAAE+I
Sbjct: 181 LKSPLSFNHMLSLHISNKQLEKVPALIEVLKKNTKPDVVTYNLLLNVCTLQNDAEAAENI 240

Query: 241 FLEMKKTKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQRNRISFSSLLSLYTN 300
           FLEMKKTK +PDW+SFSTLANLY KKQLTEKAA+TLKEMEKMA +RNR+SFSSLLSLY N
Sbjct: 241 FLEMKKTKVQPDWLSFSTLANLYCKKQLTEKAAATLKEMEKMAFKRNRLSFSSLLSLYAN 300

Query: 301 LGDKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLYTEWESVSGTGDTRV 360
           LGDKN V+RIWKK+KS FRKMSDSEY CM+SSLVKLNEL EAEKLYTEWESVSGT DTR+
Sbjct: 301 LGDKNEVHRIWKKLKSSFRKMSDSEYMCMVSSLVKLNELEEAEKLYTEWESVSGTRDTRI 360

Query: 361 PNILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAV 420
            N++LAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAV
Sbjct: 361 SNVMLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAV 420

Query: 421 GSVKKWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKM 480
           GSVKKWNADERLVKGVCKKLEEQGNIEG EQLL+ILRNAGHVDTEIYNSLLRTYAKAGKM
Sbjct: 421 GSVKKWNADERLVKGVCKKLEEQGNIEGVEQLLVILRNAGHVDTEIYNSLLRTYAKAGKM 480

Query: 481 PLVVAERMEMDNVQLNDETREFLRLTSKMCVSEVSSTLFYKTDQTNSIQSV 530
           PL+VAERME DNVQLNDETRE LRLTSKMCVSEVSSTL+ KTDQTNS+QSV
Sbjct: 481 PLIVAERMEKDNVQLNDETRELLRLTSKMCVSEVSSTLYDKTDQTNSVQSV 531

BLAST of Lsi02G022980 vs. NCBI nr
Match: gi|449462348|ref|XP_004148903.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Cucumis sativus])

HSP 1 Score: 892.5 bits (2305), Expect = 3.6e-256
Identity = 460/530 (86.79%), Postives = 483/530 (91.13%), Query Frame = 1

Query: 1   MFRSLRPSLATAAARRFSGEAHKAAAENTALEG--GADVVSVTGGGRDTLGRRLMSLTFP 60
           MFRS RPSLATAAARRFSGEA  AA+ENTALEG  G  VVS  GGGRDTLGRRLMSL FP
Sbjct: 1   MFRSFRPSLATAAARRFSGEASMAASENTALEGAAGTRVVSGKGGGRDTLGRRLMSLIFP 60

Query: 61  KRSAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYA 120
           KRSAV +IRKWQEEG T+RKYELNR VRELRKLKRYKHALEVCEWMTLQKDM+L+PGDYA
Sbjct: 61  KRSAVTAIRKWQEEGRTVRKYELNRNVRELRKLKRYKHALEVCEWMTLQKDMRLVPGDYA 120

Query: 121 VHLDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEKAEALMEKMSECGF 180
           VHLDLI KIRGLN AEKFFEDLPDK+R+QS CT+LLH YVQNNLSEKAEALMEKMSECGF
Sbjct: 121 VHLDLICKIRGLNRAEKFFEDLPDKIREQSVCTSLLHAYVQNNLSEKAEALMEKMSECGF 180

Query: 181 LKSPLSFNHMLSLHISNKQLEKVPDLIQVLKKNTKPDVVTYNLLLNVCTLQNDVEAAESI 240
           LKSPLSFNHMLSLHISNKQLEKVP LI+ LKKNTKPDVVTYNLLLNVCTLQND EAAE+I
Sbjct: 181 LKSPLSFNHMLSLHISNKQLEKVPALIEGLKKNTKPDVVTYNLLLNVCTLQNDTEAAENI 240

Query: 241 FLEMKKTKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQRNRISFSSLLSLYTN 300
           FLEMKKTK +PDWVSFSTLANLY K QLTEKAA+TLKEMEKMA + NR+S SSLLSLYTN
Sbjct: 241 FLEMKKTKIQPDWVSFSTLANLYCKNQLTEKAAATLKEMEKMAFKSNRLSLSSLLSLYTN 300

Query: 301 LGDKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLYTEWESVSGTGDTRV 360
           LGDKN VYRIWKK+KS FRKMSD EY CMISSLVKLNEL EAEKLYTEWESVSGT DTRV
Sbjct: 301 LGDKNEVYRIWKKLKSSFRKMSDREYMCMISSLVKLNELEEAEKLYTEWESVSGTRDTRV 360

Query: 361 PNILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAV 420
            N++L AYI KNQ+EQAESFYNRM  KG VPSYTTWELLTWGYLKENQMEKVLHFF+ AV
Sbjct: 361 SNVMLGAYIKKNQIEQAESFYNRMLQKGTVPSYTTWELLTWGYLKENQMEKVLHFFRKAV 420

Query: 421 GSVKKWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKM 480
             VKKWNADERLVKGVCKKLEEQGNI G EQLL+ILRNAGHVDTEIYNSLLRTYAKAGKM
Sbjct: 421 NRVKKWNADERLVKGVCKKLEEQGNINGVEQLLLILRNAGHVDTEIYNSLLRTYAKAGKM 480

Query: 481 PLVVAERMEMDNVQLNDETREFLRLTSKMCVSEVSSTLFYKTDQTNSIQS 529
           PL+VAERME DNVQLNDETRE LRLTSKMCVSEVSSTL+ KTDQ +SIQS
Sbjct: 481 PLIVAERMERDNVQLNDETRELLRLTSKMCVSEVSSTLYDKTDQMDSIQS 530

BLAST of Lsi02G022980 vs. NCBI nr
Match: gi|645259260|ref|XP_008235277.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Prunus mume])

HSP 1 Score: 730.3 bits (1884), Expect = 2.4e-207
Identity = 367/514 (71.40%), Postives = 431/514 (83.85%), Query Frame = 1

Query: 1   MFRSLRPSLATAAARRFSGEAHKAAAENTALEGGADVVSVTGGGRDTLGRRLMSLTFPKR 60
           + R+LR S+A  A R F+ EAH      TA      V   + GGRDTLGRRLMSL FPKR
Sbjct: 2   LIRTLRSSIA--AVRHFTAEAHVETKAATA-----SVEKSSSGGRDTLGRRLMSLVFPKR 61

Query: 61  SAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYAVH 120
           SAVI+IRKW+EEGH +RKYELNRIVRELRKLKRYKHALE+CEWMTLQ+DMKLLPGDYAVH
Sbjct: 62  SAVIAIRKWKEEGHKVRKYELNRIVRELRKLKRYKHALEICEWMTLQQDMKLLPGDYAVH 121

Query: 121 LDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEKAEALMEKMSECGFLK 180
           LDLIAK+RGLNSAEKFFEDLPD+M D+  CTALLH YVQN LS+KAEALM KMS+CG++K
Sbjct: 122 LDLIAKVRGLNSAEKFFEDLPDQMTDRPTCTALLHTYVQNKLSDKAEALMAKMSQCGYMK 181

Query: 181 SPLSFNHMLSLHISNKQLEKVPDLIQVLKKNTKPDVVTYNLLLNVCTLQNDVEAAESIFL 240
            PL++NH+LSL++SN Q +KVP++IQ LK NT PDVVTYNL L VC LQ+DVE AE +FL
Sbjct: 182 HPLAYNHILSLYVSNGQFDKVPEVIQELKSNTSPDVVTYNLWLTVCALQSDVETAEKVFL 241

Query: 241 EMKKTKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQRNRISFSSLLSLYTNLG 300
           E+KK K  PDWV+FSTL NLY K  LTEKAA TLKEMEK+AS+ NR+++SSL+SL+TN+G
Sbjct: 242 ELKKAKLNPDWVTFSTLTNLYIKSLLTEKAAVTLKEMEKIASRENRVAYSSLVSLHTNIG 301

Query: 301 DKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLYTEWESVSGTGDTRVPN 360
           DK+GV+RIWKKMKS FRKM+D+EYTCM+SSLVKL E  EAEKLYTEWESVSGT D RV N
Sbjct: 302 DKDGVWRIWKKMKSCFRKMNDAEYTCMLSSLVKLKEFEEAEKLYTEWESVSGTHDARVSN 361

Query: 361 ILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAVGS 420
           ILLAAYINK+QME AE+F+NRM   GI+  Y+TWELLTWG+LK+   EKVL  FK AVGS
Sbjct: 362 ILLAAYINKDQMEMAETFHNRMVQNGIMSCYSTWELLTWGFLKQKHTEKVLDNFKKAVGS 421

Query: 421 VKKWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPL 480
           VK+W+ D+RL+  V  +L E+GNI+GAE+LL+ LRNAGHV TEIYNSLLRTYA+AGKMPL
Sbjct: 422 VKRWDPDKRLIGEVFNRLREEGNIQGAEELLVFLRNAGHVSTEIYNSLLRTYAEAGKMPL 481

Query: 481 VVAERMEMDNVQLNDETREFLRLTSKMCVSEVSS 515
           +VAERME DNVQL++ETR  ++LTS MCVSEV S
Sbjct: 482 IVAERMEKDNVQLDEETRRLIKLTSTMCVSEVPS 508

BLAST of Lsi02G022980 vs. NCBI nr
Match: gi|1009148725|ref|XP_015892090.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 725.7 bits (1872), Expect = 5.8e-206
Identity = 364/513 (70.96%), Postives = 432/513 (84.21%), Query Frame = 1

Query: 1   MFRSLRPSLATAAARRFSGEAHKAAAENTALEGGADVVSVTGGGRDTLGRRLMSLTFPKR 60
           + RS+R  LA  A R FS  A  A   +T     A   +  GGGRDTLG+RLMSL +PKR
Sbjct: 2   LVRSIRTYLA--AVRHFSAAASAAEKASTTC---AVAKNSGGGGRDTLGKRLMSLVYPKR 61

Query: 61  SAVISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYAVH 120
           SAVI+I KW+EEGH++RKYELNRIVRELRKLKRYKHALE+CEWMTLQ+D+KL+PGDYAVH
Sbjct: 62  SAVIAISKWKEEGHSVRKYELNRIVRELRKLKRYKHALEICEWMTLQQDIKLVPGDYAVH 121

Query: 121 LDLIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEKAEALMEKMSECGFLK 180
           LDLIAK+RG+ SAEKFFEDLP+KM  Q+ CTALLH Y +NNLS KAEALM KMSECGFL+
Sbjct: 122 LDLIAKVRGIKSAEKFFEDLPEKMTGQATCTALLHTYAKNNLSSKAEALMAKMSECGFLR 181

Query: 181 SPLSFNHMLSLHISNKQLEKVPDLIQVLKKNTKPDVVTYNLLLNVCTLQNDVEAAESIFL 240
           +PL +NHMLSL+ISN QLEKVP +++ LKKN  PDVVTYNLLL VC  QNDVE AE + +
Sbjct: 182 NPLPYNHMLSLYISNGQLEKVPKMVEELKKNASPDVVTYNLLLTVCASQNDVETAEKVLV 241

Query: 241 EMKKTKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQRNRISFSSLLSLYTNLG 300
           E++K+K  PDWV++S+L NLY K   TEKAASTLKEMEKM S++NR+++SSLLSL+TN+ 
Sbjct: 242 ELRKSKINPDWVTYSSLTNLYIKNAFTEKAASTLKEMEKMVSRKNRVAYSSLLSLHTNIR 301

Query: 301 DKNGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLYTEWESVSGTGDTRVPN 360
           DK+GV RIWKKMKS FRKM+D+EYTCMISSLVKL E  EAE LY EWES+SGTGD RVPN
Sbjct: 302 DKDGVCRIWKKMKSCFRKMNDAEYTCMISSLVKLEEFKEAEDLYNEWESISGTGDARVPN 361

Query: 361 ILLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAVGS 420
           ILLAAYIN+NQME AE FY+R++ KGI P YTTWELLTWGYLKE QM+KVL +FK AV S
Sbjct: 362 ILLAAYINRNQMETAEIFYDRLAEKGINPCYTTWELLTWGYLKEKQMDKVLDYFKKAVNS 421

Query: 421 VKKWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPL 480
           VKKW+ D+RLV+ V K+LEEQGN+E AEQ+L+ILRNAGH++TEIYNS+LRTYA AGKMPL
Sbjct: 422 VKKWDPDDRLVREVFKRLEEQGNVEVAEQMLVILRNAGHLNTEIYNSILRTYATAGKMPL 481

Query: 481 VVAERMEMDNVQLNDETREFLRLTSKMCVSEVS 514
           +VAERME DNV+L++ETRE ++ TSKM VSEV+
Sbjct: 482 IVAERMEKDNVELDEETRELIKKTSKMRVSEVT 509

BLAST of Lsi02G022980 vs. NCBI nr
Match: gi|595790481|ref|XP_007198989.1| (hypothetical protein PRUPE_ppa004422mg [Prunus persica])

HSP 1 Score: 721.8 bits (1862), Expect = 8.4e-205
Identity = 364/510 (71.37%), Postives = 426/510 (83.53%), Query Frame = 1

Query: 3   RSLRPSLATAAARRFSGEAHKAAAENTALEGGADVVSVTGGGRDTLGRRLMSLTFPKRSA 62
           R+LR S+A  A R F+ EAH      TA      V   + GGRDTLGRRLMSL FPKRSA
Sbjct: 4   RTLRSSIA--AVRHFTAEAHVETKAATA-----SVEKSSSGGRDTLGRRLMSLVFPKRSA 63

Query: 63  VISIRKWQEEGHTLRKYELNRIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYAVHLD 122
           VI+IRKW+EEGH +RKYELNRIVRELRKLKRYKHALE+CEWMTLQ+DMKLLPGDYAVHLD
Sbjct: 64  VIAIRKWKEEGHKVRKYELNRIVRELRKLKRYKHALEICEWMTLQQDMKLLPGDYAVHLD 123

Query: 123 LIAKIRGLNSAEKFFEDLPDKMRDQSACTALLHVYVQNNLSEKAEALMEKMSECGFLKSP 182
           LIAK+RGLNSAEKFFEDLPD+M     CTALLH YVQN LS+KAEALM KMS+CG++K P
Sbjct: 124 LIAKVRGLNSAEKFFEDLPDQMTGHPTCTALLHTYVQNKLSDKAEALMAKMSQCGYMKHP 183

Query: 183 LSFNHMLSLHISNKQLEKVPDLIQVLKKNTKPDVVTYNLLLNVCTLQNDVEAAESIFLEM 242
           L++NHMLSL++SN Q +KVP++IQ LK NT PDVVTYNL L VC  Q+DVE AE +FLE+
Sbjct: 184 LAYNHMLSLYVSNGQFDKVPEVIQELKSNTSPDVVTYNLWLTVCASQSDVETAEKVFLEL 243

Query: 243 KKTKTEPDWVSFSTLANLYSKKQLTEKAASTLKEMEKMASQRNRISFSSLLSLYTNLGDK 302
           KK K  PDWV+FSTL NLY K  LTEKAA TLKEMEK+AS++NR ++SSLLSL+TN+GD+
Sbjct: 244 KKAKLNPDWVTFSTLTNLYIKSLLTEKAAVTLKEMEKIASRKNRAAYSSLLSLHTNIGDE 303

Query: 303 NGVYRIWKKMKSLFRKMSDSEYTCMISSLVKLNELGEAEKLYTEWESVSGTGDTRVPNIL 362
           +GV+RIWKKMKS FRKM+D+EYTCM+SSLVKL E  EAEKLYTEWESVS T D RV NIL
Sbjct: 304 DGVWRIWKKMKSCFRKMNDAEYTCMLSSLVKLKEFEEAEKLYTEWESVSETHDARVSNIL 363

Query: 363 LAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAVGSVK 422
           LAAYINK+QME AE+F+NRM   GI P Y+TWELLTWG+LK+   EKVL  FK AVGSVK
Sbjct: 364 LAAYINKDQMEMAETFHNRMVQNGITPCYSTWELLTWGFLKQKHTEKVLDNFKKAVGSVK 423

Query: 423 KWNADERLVKGVCKKLEEQGNIEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLVV 482
           +W+ D+RL+  V  +L+E+GNI+GAE+LL+ LRNAGHV TEIYNS+LRTYA+AGKMPL+V
Sbjct: 424 RWDPDKRLIGEVFNRLKEEGNIKGAEELLLFLRNAGHVSTEIYNSVLRTYAEAGKMPLIV 483

Query: 483 AERMEMDNVQLNDETREFLRLTSKMCVSEV 513
           AERME DNVQL++ETR  ++LTS MCVSEV
Sbjct: 484 AERMEKDNVQLDEETRRLIKLTSTMCVSEV 506

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP302_ARATH8.7e-17860.49Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop... [more]
PPR3_ARATH3.8e-7235.06Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN... [more]
PP400_ARATH5.5e-7135.24Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana GN... [more]
PPR86_ARATH3.7e-6734.11Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN... [more]
PP166_ARATH1.4e-6334.02Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0K7E2_CUCSA2.5e-25686.79Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390000 PE=4 SV=1[more]
M5VTF8_PRUPE5.8e-20571.37Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004422mg PE=4 SV=1[more]
F6HEI3_VITVI2.8e-19973.42Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02800 PE=4 SV=... [more]
A0A061DRS7_THECC6.9e-19869.38Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_004... [more]
A5ALW8_VITVI8.5e-19667.94Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037299 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G02820.14.9e-17960.49 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G02150.12.1e-7335.06 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G27460.13.1e-7235.24 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G60770.12.1e-6834.11 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G20710.18.1e-6534.02 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659100982|ref|XP_008451368.1|5.9e-26789.64PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial ... [more]
gi|449462348|ref|XP_004148903.1|3.6e-25686.79PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial ... [more]
gi|645259260|ref|XP_008235277.1|2.4e-20771.40PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial ... [more]
gi|1009148725|ref|XP_015892090.1|5.8e-20670.96PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial ... [more]
gi|595790481|ref|XP_007198989.1|8.4e-20571.37hypothetical protein PRUPE_ppa004422mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0006606 protein import into nucleus
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G022980.1Lsi02G022980.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 149..178
score: 3.3E-4coord: 324..347
score: 0.021coord: 360..387
score: 0.026coord: 287..314
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 214..259
score: 1.1
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 360..390
score: 1.2E-4coord: 149..178
score: 2.9E-4coord: 217..251
score: 8.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 355..389
score: 9.756coord: 181..211
score: 5.525coord: 390..420
score: 5.546coord: 250..284
score: 7.443coord: 215..249
score: 10.808coord: 461..495
score: 6.971coord: 146..180
score: 8.912coord: 285..315
score: 7.278coord: 320..350
score:
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 212..417
score: 4.
NoneNo IPR availableunknownCoilCoilcoord: 526..529
score: -coord: 263..283
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 51..502
score: 1.0E
NoneNo IPR availablePANTHERPTHR24015:SF27SUBFAMILY NOT NAMEDcoord: 51..502
score: 1.0E

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G022980Bottle gourd (USVL1VR-Ls)lsilsiB003
Lsi02G022980Bottle gourd (USVL1VR-Ls)lsilsiB108
Lsi02G022980Cucurbita maxima (Rimu)cmalsiB347
Lsi02G022980Cucurbita maxima (Rimu)cmalsiB348
Lsi02G022980Cucurbita maxima (Rimu)cmalsiB478
Lsi02G022980Cucurbita maxima (Rimu)cmalsiB749
Lsi02G022980Cucurbita maxima (Rimu)cmalsiB825
Lsi02G022980Cucurbita moschata (Rifu)cmolsiB335
Lsi02G022980Cucurbita moschata (Rifu)cmolsiB337
Lsi02G022980Cucurbita moschata (Rifu)cmolsiB463
Lsi02G022980Cucurbita moschata (Rifu)cmolsiB742
Lsi02G022980Cucurbita moschata (Rifu)cmolsiB812
Lsi02G022980Cucurbita pepo (Zucchini)cpelsiB498
Lsi02G022980Cucurbita pepo (Zucchini)cpelsiB112
Lsi02G022980Cucurbita pepo (Zucchini)cpelsiB113
Lsi02G022980Cucurbita pepo (Zucchini)cpelsiB203
Lsi02G022980Cucurbita pepo (Zucchini)cpelsiB265
Lsi02G022980Cucurbita pepo (Zucchini)cpelsiB704
Lsi02G022980Melon (DHL92) v3.5.1lsimeB222
Lsi02G022980Watermelon (97103) v1lsiwmB190
Lsi02G022980Watermelon (Charleston Gray)lsiwcgB195
Lsi02G022980Watermelon (Charleston Gray)lsiwcgB202
Lsi02G022980Watermelon (Charleston Gray)lsiwcgB208
Lsi02G022980Watermelon (97103) v1lsiwmB224
Lsi02G022980Cucumber (Gy14) v2cgyblsiB157
Lsi02G022980Melon (DHL92) v3.6.1lsimedB232
Lsi02G022980Silver-seed gourdcarlsiB063
Lsi02G022980Silver-seed gourdcarlsiB098
Lsi02G022980Silver-seed gourdcarlsiB297
Lsi02G022980Silver-seed gourdcarlsiB688
Lsi02G022980Cucumber (Chinese Long) v3cuclsiB189
Lsi02G022980Watermelon (97103) v2lsiwmbB196
Lsi02G022980Watermelon (97103) v2lsiwmbB204
Lsi02G022980Wax gourdlsiwgoB224