CmaCh08G002150 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh08G002150
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr08 : 1209738 .. 1214335 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATACCCATATTTTCAAAGGCCCCTTCTTCATCGTCTTCTTCATGTCCAGCCCACTACTCGCAGAGGTCGCATAGTCCCCCATTTTCAACTCCATCGAACCAACCTCGACGTTGGAGACTCAGTGTGACGGAAATTAGGGACAAATAGGGTTTCTCAACGATGCTTCATGGCTGACATTTGCAGAAACGTGCTGTGTTTTTGGCCAATTTTCATTCCATTTTAATTCACCCAACCATTTCCCTCGCACAAAACCCTAGGGCACACCAAGCTGAGGGAATCAACTCTCCGGGTTCTCCAATAATAGCCCTACTACCTTCCAATTTCATCACTCTCTTCGAAATTCAGGTGATTATTGTGTTTCTTGCTGCTTCCCGGTTCAATTTGCGAAACCCTAGAATTTTAAATTTGGGGATTTTCCTGGGGTGCAATGATTCTGTGTTATTCTACCTTAGGGGTTTTAATGGCCGCATGATTGTGTTTCGTATGTGTCATGCATTGTGATTGTGTGCATCGAGGTTAGTGTTGCAACCTTGTTGATTCAGGATTAATAGCCATGGGCACGAAATTTTATCGTGCTTTGATGCATATGAATAGAAAATTTCGTCGAGTTTGTTCGAATGGTAGGTTTATTGTTTCTGAAGCTTCATTTTATCCGTCATGGACACGCACGTTTGGGAATTTACAAGACAATCAGTTGCAGCTGCCATGCTGTAGCGGGCACTGTAGCTGGTTTTCATATTTCACGTAACTCATGTCTTGCCTCCTAATAATTAATTTAATCTATTTAGTTAATTCACTTATTGTCTTTTAGTTGGTTCTTCTAATTCTTGTTTCTTAGAATTCTACCTTCGCCCAAATCATTTTGTGTTTGTGCATTCTCAGTACGGATGTATTTTTACTTTTAGCTATTTAAATCCATGGTGTTGCGCTTAGAACAGCTCAGTCGTGTTTTGTTCTTTTGCTATGTGTGCGTTTCCTGTTAGAGGGTAGGTATCTTAAGGTTCTGCCCAAACTAGACTTGGTAAAAGGATGGGACACATTGTTTTTTTTTTTTTTTGATAAGAAGAACGAGACACATTATAAATCTTGGAACTCAAATTTAAGTTGGTTAAGTACCCTTCTCTGTTCCATGGATTGACCTAGTGATCTTTAAGGCCAATTAACAAGTGTAAATGGTTTAGGGGATGGGTTCAAACCATGATTGGTACCTATCTCGGATTTAATATTTTTCAAGTTTCCTTGGCAACTAAATGTAGAAAGTTAGGTGGTTGTCCTTTGACATTAGTTGAAGTGTGCTTAAGTTGGCATCGACACTTGTTGATATCTAGAATAGAGAAAAGGTACCTATTGGCTCTTTGAAATTTTTGTAAAATCTATTTGATAATTTCGAGGGTGAAGTAGATTGCCAAAAACATATAGATGTCAGAGCACTTGGTCTAACATTACGAGCTTCAGCTTTAGAATATCTTTCAGTTCATTGATTGTCTGTATAGTGGATTGGAATTGAGTTATTGGGATCAGAAGAAACATTTTCAAGCAGAGTTGTATGTGATGGAAAATTAAGATGTTCTTCATAAGATGGTTAAGATCGTAAGAAACTAGTTATTTGTACAAGAATACAGTTCTTCTGCACTTGAAGATTTCTTTGAATTGCGACTCAGCCAATATACCACTATGCATATGTTGTAGTGGTTGTTGGCATTTTTGTTCTTGGGCTGTTTCTGATAACCCGAGCAAGTGAAAAAGTTGTTAGAAAAGTTGAAAGTCTTTAGAGGCTTTTCTTTCGAGGATGGACAGAGGGAAGAAAGCAATCGTTTAATCCATTCCTTGCCTGGTTAGCTGACAGGCTTGGAGAGGTCATTGCTGTTACTATTAACCTACCATAGTTGGCATTTTTATTCTTCTTCCCAACAGCATGCAAGCTTTTCCTGTGTTTGAATCAAGCAAGAAAGCCACAGGTTTTTTGTTGAATTTTTTTTGCCCAGATTCTTCCTTAAAGCTATTTTTGACGCTTAATTCTGTGATGGGGGGAGGTACATTGGAATTTTATAGCTGTTTGTTTGGTTGTAGATTGGAGTGTGCTTCTATATTAGTGTCTGGTGGTGGGGATTTTCTCTACCTTAGACCCTAAGTTTTTATTGTTGCTATTTTTCTCTTTATACATTCTTTCTAAAAATTGTTGGTTAACTTACCATTTTGGTCCATATACTTCGAATTTCAATCCATTTCAGTTTCTGTACTTTCAAATGTCCAAATTAAGTCACGTACTTTCAATAAAGCTTAAAATTGATCCCTACTGTTTGTTAATTGTTACTTTTCTAAAAAACTAGTCTCTGTTTACCTTCTCTCTATAAATTTTGGAAGTATGTTCACATTTTTGTCTTTTCTTACATAAAAATTATTATTATTATTTAACTGATTTTGGGTAACAATTAACTTCAAACTAATGATAGAGACTAGTTTTAAGATTCAATGAAAGTACAAAGACTAAATAGAATGATACCGGAAGTTCGTAGACCAAAATGGTATTTTAACCAAAATTGCTGTTGCATTATTTTCTTTCCGTAGAAAAAGATATTGGATTCGTTATGTCAATGTTCTACCACTTGTATGGAGGGAATGATACCTGTAGGTTTTCTTTGTACAAGATGTGAAGATCTTCTTTGTTGGGATATGTAGTTTTGACTTTAACCACCAGTAGCGAAAGGAGCAAGCTGCAGATTGGGTTGGCCACTCATCTAGAATTTAAAATATATAATATTCTTCTAATTTTTAGATAGTTGTTGTGGAATGAATTAGGTGATTGTCTCATGAGAACTATTGAATGTGTGCACTCACAAAGTGGTTTGGCACTCAGTCATAAACAAAAGAGTAGCTTTGTATGTGTCAAGGATTGTAGTGTTACTTTTGTTAGGTGCTAAAATATCTTATTTGTTTTGTTTTAGTATAGGACACAAATGAATATTTTATGTTGTTTTAGATCCCTTAAAGACACATAATAGATATTTTCTAATATTGAAAGATATGGTATTAATTTAAGGTGTTATAGGTTTTTCTTTCTTAGGAGCTTTGGATAGTTTTTGTACCAGCCATACATGATGTGGGTGTATAAACTATATTCCCTAGGCTGATTATATAACTCAGTCCCTAATGCTTGTTTCATTTTTTAGTTTTGTTGCTAATCTTTTATAATTTCAATTTGATTTTTCATATCCTTGAAAATTTTCAAGCAAGTCCTGAACATTCCTTGTTTTAGTTGCTTTATTTTCTATAACAACGAGCAATTTTGATTTCAAGCTGGATAAGTTACTGTTCCAGGTTACAAGGAGTGAGTAGGGTTCTGATATTACGGGCAAGTATAATAGCATTTCTTTTGAGAAAGAAATGTAATTAATTTCAGTCACCAGTGGTGGGTTAAAAAAAGGATCTTCAAATAGTGATTCGAGTAGAAAGTGCATAATACAATACCATTTTAATGGGCCTATTTGCTATAACAGCATGCAATTTTCATGTTAGGTAAGTTACTATGTTCCAAGTAGTATGAAATGAGTAGGCTTACATTTTGGGAGAAAGTGGTAGGCTTATTTCATCAAGTTTAGATAATTTTTTAATTCACCTAAGGCAAAAAATATATGTTTTAGTATACATTTGAGTTTTTTATTTTTATTATTTTATTTTTTTTTATAAATTAATCCCTATTGTTATTGAAGTTTTATGAAAAACTTTTGAACGTAAGGGACTAGATTGGAACATTTTAGACAATGGGGACTAAATTTTAAAATATGCTTAAAACTTTGGGACTGATACAGATATTTAGCTAATTAATTCAATGTCATAAAATTAAATGTACTATGATGGCATATTTTCATTTTATCTGTGTATTTTAACGTTGTGTGTTAGTAAAAATTTGATTGAAAAAATCTATATATTGAACAATAAAATGGAATTTTTTAAAAGATTTGGGACTAAATTGAAAATGAGAAAATCATAAGAGTTTTTTGTTGTTGTTTTTATTTTATTTTATTCTTTTAGCCTACTTATTTAGCAATCCTAGAAGTGATAGTGTGTCTTTTCCTATTTTTAGATGATGCTTCTGTGGTTTTATTTGCCTATGATTCTTCTTATTTACTCAAGGGAAAACAAGGAGGAGCTGTTGCATCGATTTTTGGGACAATTTGAGTTTAGTCCGATCTACACAACAGACATCTTTTTTTTTCCTTGAACTCTACTGGTTTACAGGCTGAGATGATGTGGTGCTAGGAATGCTTGAGTACCTATATCATGAGCTTTATTTTTCATCCCAGGCTAATTGACAATGGTTTGCTCCACTGTATGTGTGTGCTTTCATTTATATCGGAAGTATAGTTCAAGTTACAATGTGCCTGGATTTGAATAGTTTCATATGGTGGTTGATGTTGAACTTAGGAATATAACCTTTTGAAACTTTAATTAGTATCTGATTTTTGATTGTATTCTATTATGATTTTTAAAGTTTTGTGTTTTACTGGTTTCGATGGATAATATTGATGAGAGGAAACTATTGTAGGTAATGATGCAGGAATGCATGGATGCTGCTGAAGCGCTGGTTTCATAG

mRNA sequence

ATGGATACCCATATTTTCAAAGGCCCCTTCTTCATCGTCTTCTTCATGTCCAGCCCACTACTCGCAGAGAAACGTGCTGTGTTTTTGGCCAATTTTCATTCCATTTTAATTCACCCAACCATTTCCCTCGCACAAAACCCTAGGGCACACCAAGCTGAGGGAATCAACTCTCCGGGTTCTCCAATAATAGCCCTACTACCTTCCAATTTCATCACTCTCTTCGAAATTCAGCCTACTTATTTAGCAATCCTAGAAGTGATAGAATGCATGGATGCTGCTGAAGCGCTGGTTTCATAG

Coding sequence (CDS)

ATGGATACCCATATTTTCAAAGGCCCCTTCTTCATCGTCTTCTTCATGTCCAGCCCACTACTCGCAGAGAAACGTGCTGTGTTTTTGGCCAATTTTCATTCCATTTTAATTCACCCAACCATTTCCCTCGCACAAAACCCTAGGGCACACCAAGCTGAGGGAATCAACTCTCCGGGTTCTCCAATAATAGCCCTACTACCTTCCAATTTCATCACTCTCTTCGAAATTCAGCCTACTTATTTAGCAATCCTAGAAGTGATAGAATGCATGGATGCTGCTGAAGCGCTGGTTTCATAG

Protein sequence

MDTHIFKGPFFIVFFMSSPLLAEKRAVFLANFHSILIHPTISLAQNPRAHQAEGINSPGSPIIALLPSNFITLFEIQPTYLAILEVIECMDAAEALVS
Homology
[Close]
BLAST of CmaCh08G002150 vs. TrEMBL
Match: A0A0A0K9W9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342000 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-11
Identity = 51/100 (51.00%), Postives = 57/100 (57.00%), Query Frame = 1 

Query: 1  MDTHIFKGPFFIVFFMSSPLLAEKRAVFLANFHSILIHPT--ISLAQNPRAHQAEGINSP 60
          M+THIFKGP       + P         L  F S   + T   SLAQNPRAHQAEG NS 
Sbjct: 1  MNTHIFKGPLLRRLLHAQPTTRRGTCCVLGQF-SFHFNSTNFFSLAQNPRAHQAEGTNSL 60

Query: 61 GSPIIALLPSNFITLFEIQPTYLAILEVIECMDAAEALVS 99
           SPIIA   SNF TL EIQ      + + ECMDAAEAL+S
Sbjct: 61 SSPIIAFPASNFFTLLEIQ------VMMQECMDAAEALLS 93

[Close]
BLAST of CmaCh08G002150 vs. NCBI nr
Match: gi|700189373|gb|KGN44606.1| (hypothetical protein Csa_7G342000 [Cucumis sativus])

HSP 1 Score: 77.0 bits (188), Expect = 2.0e-11
Identity = 51/100 (51.00%), Postives = 57/100 (57.00%), Query Frame = 1 

Query: 1  MDTHIFKGPFFIVFFMSSPLLAEKRAVFLANFHSILIHPT--ISLAQNPRAHQAEGINSP 60
          M+THIFKGP       + P         L  F S   + T   SLAQNPRAHQAEG NS 
Sbjct: 1  MNTHIFKGPLLRRLLHAQPTTRRGTCCVLGQF-SFHFNSTNFFSLAQNPRAHQAEGTNSL 60

Query: 61 GSPIIALLPSNFITLFEIQPTYLAILEVIECMDAAEALVS 99
           SPIIA   SNF TL EIQ      + + ECMDAAEAL+S
Sbjct: 61 SSPIIAFPASNFFTLLEIQ------VMMQECMDAAEALLS 93

The following BLAST results are available for this feature:
BLAST of CmaCh08G002150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh08G002150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9W9_CUCSA1.4e-1151.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342000 PE=4 SV=1[more]
BLAST of CmaCh08G002150 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh08G002150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189373|gb|KGN44606.1|2.0e-1151.00hypothetical protein Csa_7G342000 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G002150.1CmaCh08G002150.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh08G002150Cla97C09G171760Watermelon (97103) v2cmawmbB940
CmaCh08G002150Carg05038Silver-seed gourdcarcmaB0112
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh08G002150Cucurbita maxima (Rimu)cmacmaB374
CmaCh08G002150Wild cucumber (PI 183967)cmacpiB934
CmaCh08G002150Cucumber (Gy14) v1cgycmaB0144
CmaCh08G002150Cucurbita moschata (Rifu)cmacmoB913
CmaCh08G002150Cucumber (Chinese Long) v2cmacuB914
CmaCh08G002150Melon (DHL92) v3.5.1cmameB826
CmaCh08G002150Watermelon (Charleston Gray)cmawcgB786
CmaCh08G002150Watermelon (97103) v1cmawmB856
CmaCh08G002150Cucurbita pepo (Zucchini)cmacpeB896
CmaCh08G002150Cucurbita pepo (Zucchini)cmacpeB914
CmaCh08G002150Bottle gourd (USVL1VR-Ls)cmalsiB822
CmaCh08G002150Cucumber (Gy14) v2cgybcmaB973
CmaCh08G002150Melon (DHL92) v3.6.1cmamedB924
CmaCh08G002150Cucumber (Chinese Long) v3cmacucB1084