CmaCh08G001840 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGCTGGTGTGGTGTGAAACAGTGAGGTCTTAAATGAGAATATCTTGGAGTGTGTGTGGTTATTCAAAACTCACCTCCTGTTGTTCATGCCTGAACCAAACGCCTCTAATCCAAGGTGCATTTCTCTCTCTCTCTCTCCCTCTTTCTTTAACTTAAGGGTTTATACCCAAATTTAATGATATGGGTTACTTCTTTTCTGGGTTTTAATGCTTATGGCTATTCAAATTCTATGGCTATCTCTACAAATTGGGTAAAATTTAAGATTTTTTTGGGTGGGTTTTATTAGACTAGCACTGCTCTCCACAATGGTATGGTATAAACTGGTGGCTTTAGTTTTGGGTTTCTCCAAAAGGCCTCAAACCAATAGAAATAGTATAAGTGGGACTTTCATCATTCACATGTTTTCTTTTACCTTAGGACTTTCTCTCTCTAGAAATTGGGTAAAATTGAAGGCAATGAAGGTTTTTCTTTGTGGGTTTTTACCCTATGGCTCTCTCTCTCTCTAGAAATGGTGTAAAATTGAAGGCAATGTGTTTTTCTTTGTGGTTTTTACCTCATGGCTCTCTCTCTCTCTCTCTCTCTAGAAATTTGTGTAAAATTGAAGGTGGAAGTAGAATTGGGCCATTAAGACTTTTGGGTTTGGGCTTAAATGCTTGGCCCATTTAAACCTATTATGAACGATTGAAGTAGATATTAGAATGTCTACTTGAATTAGTTCTAAAAAAAGATATTTAAATATAAACTTTTTTTTTTATATATATATATTTTAAGAGTAGTTTATAAATTAAAAAAAATGATACTGTTAACGTGGGTAATTTTGAAACGTTTTCATCGAAACAAACCCTTTTTTGTTTGATCTTTTGGAAATTCGGAATTTTTAAGCCAATTTGTGCACCATTTTAGGGTTTTAAGAGAAGGGTTTTCCTCAAAAAAGTTGATATCAATGAGTATTATGCATGATATGAAATGGGTACTCCTCCACAGGAAGCCATGGTATCAAAGAGCAATGGAAATAGTGGGAACCCAATGGAGAACAACATCTTCAAAATCAAGAGATCAATACCCAATTCCATCACCAAATGGAGCATTCAATTCCAACAGCAACAATAAACACAACAAAATGAGAAAATGCACTTCTCTCAAGATAGCAACTTCCTTCACAAGAGTATGTCTTTGTGCACCCATCTCTTCTTACAATGAAATCTTCCAACAAGCTGATATCCCACCAAGGAGAAGCCATAGCTATCCAAGATCCAAGCCTTTTCCTACTACTACTACTAATAATATCGTTCTTCCAACTCCTCAACTTAGCGGTGAAAATAGTCGACGGGTCTTCCGGGGAAAGTCCCTCACCGACGACGTTTTGATGCGGAGATTCGTCGTGGAAGAAGAGGCTATGATGCAAGTCAGGAGAAGAAACCAAATGGAAGTTATAAGGAAGAGGAATTTGATGAGAAGGAAGAAGCTTGGTCCAAGCCCTCTTAGCAAAATGGTTATAGCTGAGGAATAACAATGACATACGTGTATTATACTCGATTCTTCGTGTTCGTTCTTTTTTGCAAAATTAATGGCTCCTTTTGTACTCGTTTAATTTTGTGTTTAATGAGCATTAATTCGTTCAACAGATACACCTGGACCG TAGCTGGTGTGGTGTGAAACAGTGAGGTCTTAAATGAGAATATCTTGGAGTGTGTGTGGTTATTCAAAACTCACCTCCTGTTGTTCATGCCTGAACCAAACGCCTCTAATCCAAGGAAGCCATGGTATCAAAGAGCAATGGAAATAGTGGGAACCCAATGGAGAACAACATCTTCAAAATCAAGAGATCAATACCCAATTCCATCACCAAATGGAGCATTCAATTCCAACAGCAACAATAAACACAACAAAATGAGAAAATGCACTTCTCTCAAGATAGCAACTTCCTTCACAAGAGTATGTCTTTGTGCACCCATCTCTTCTTACAATGAAATCTTCCAACAAGCTGATATCCCACCAAGGAGAAGCCATAGCTATCCAAGATCCAAGCCTTTTCCTACTACTACTACTAATAATATCGTTCTTCCAACTCCTCAACTTAGCGGTGAAAATAGTCGACGGGTCTTCCGGGGAAAGTCCCTCACCGACGACGTTTTGATGCGGAGATTCGTCGTGGAAGAAGAGGCTATGATGCAAGTCAGGAGAAGAAACCAAATGGAAGTTATAAGGAAGAGGAATTTGATGAGAAGGAAGAAGCTTGGTCCAAGCCCTCTTAGCAAAATGGTTATAGCTGAGGAATAACAATGACATACGTGTATTATACTCGATTCTTCGTGTTCGTTCTTTTTTGCAAAATTAATGGCTCCTTTTGTACTCGTTTAATTTTGTGTTTAATGAGCATTAATTCGTTCAACAGATACACCTGGACCG ATGCCTGAACCAAACGCCTCTAATCCAAGGAAGCCATGGTATCAAAGAGCAATGGAAATAGTGGGAACCCAATGGAGAACAACATCTTCAAAATCAAGAGATCAATACCCAATTCCATCACCAAATGGAGCATTCAATTCCAACAGCAACAATAAACACAACAAAATGAGAAAATGCACTTCTCTCAAGATAGCAACTTCCTTCACAAGAGTATGTCTTTGTGCACCCATCTCTTCTTACAATGAAATCTTCCAACAAGCTGATATCCCACCAAGGAGAAGCCATAGCTATCCAAGATCCAAGCCTTTTCCTACTACTACTACTAATAATATCGTTCTTCCAACTCCTCAACTTAGCGGTGAAAATAGTCGACGGGTCTTCCGGGGAAAGTCCCTCACCGACGACGTTTTGATGCGGAGATTCGTCGTGGAAGAAGAGGCTATGATGCAAGTCAGGAGAAGAAACCAAATGGAAGTTATAAGGAAGAGGAATTTGATGAGAAGGAAGAAGCTTGGTCCAAGCCCTCTTAGCAAAATGGTTATAGCTGAGGAATAA MPEPNASNPRKPWYQRAMEIVGTQWRTTSSKSRDQYPIPSPNGAFNSNSNNKHNKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPQLSGENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAEE
BLAST of CmaCh08G001840 vs. TrEMBL
Match: A0A0A0KBW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087190 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.3e-71 Identity = 152/198 (76.77%), Postives = 164/198 (82.83%), Query Frame = 1
BLAST of CmaCh08G001840 vs. TrEMBL
Match: B9T0X2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1238650 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 8.9e-52 Identity = 126/207 (60.87%), Postives = 144/207 (69.57%), Query Frame = 1
BLAST of CmaCh08G001840 vs. TrEMBL
Match: M5XB21_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009586mg PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.2e-51 Identity = 125/219 (57.08%), Postives = 154/219 (70.32%), Query Frame = 1
BLAST of CmaCh08G001840 vs. TrEMBL
Match: I3SPU5_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 7.5e-51 Identity = 116/193 (60.10%), Postives = 144/193 (74.61%), Query Frame = 1
BLAST of CmaCh08G001840 vs. TrEMBL
Match: V4VSE7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022275mg PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 1.7e-50 Identity = 117/201 (58.21%), Postives = 142/201 (70.65%), Query Frame = 1
BLAST of CmaCh08G001840 vs. TAIR10
Match: AT3G59680.2 (AT3G59680.2 unknown protein) HSP 1 Score: 181.0 bits (458), Expect = 6.5e-46 Identity = 107/195 (54.87%), Postives = 139/195 (71.28%), Query Frame = 1
BLAST of CmaCh08G001840 vs. NCBI nr
Match: gi|449445670|ref|XP_004140595.1| (PREDICTED: probable myosin light chain kinase DDB_G0279831 isoform X2 [Cucumis sativus]) HSP 1 Score: 290.4 bits (742), Expect = 2.2e-75 Identity = 160/208 (76.92%), Postives = 172/208 (82.69%), Query Frame = 1
BLAST of CmaCh08G001840 vs. NCBI nr
Match: gi|659120097|ref|XP_008460011.1| (PREDICTED: serine/threonine-protein kinase pakD isoform X2 [Cucumis melo]) HSP 1 Score: 288.9 bits (738), Expect = 6.3e-75 Identity = 161/203 (79.31%), Postives = 171/203 (84.24%), Query Frame = 1
BLAST of CmaCh08G001840 vs. NCBI nr
Match: gi|778711494|ref|XP_011656743.1| (PREDICTED: probable myosin light chain kinase DDB_G0279831 isoform X1 [Cucumis sativus]) HSP 1 Score: 287.0 bits (733), Expect = 2.4e-74 Identity = 159/209 (76.08%), Postives = 171/209 (81.82%), Query Frame = 1
BLAST of CmaCh08G001840 vs. NCBI nr
Match: gi|659120095|ref|XP_008460010.1| (PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo]) HSP 1 Score: 285.4 bits (729), Expect = 7.0e-74 Identity = 160/204 (78.43%), Postives = 170/204 (83.33%), Query Frame = 1
BLAST of CmaCh08G001840 vs. NCBI nr
Match: gi|700191135|gb|KGN46339.1| (hypothetical protein Csa_6G087190 [Cucumis sativus]) HSP 1 Score: 277.3 bits (708), Expect = 1.9e-71 Identity = 152/198 (76.77%), Postives = 164/198 (82.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |