Cla007035 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla007035
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown Protein (AHRD V1)
Location	Chr6 : 1019903 .. 1020463 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATAGTGGGAAGTCAATGGAAAACAAGTTCAAAATCAAGAGAAATCACAATTCCAACAACAAATGGGACATTGAATTCCAAGGGCAATGAATTCTCAGGAATTGGGAATAATTCCAATAATAATAATAATAAGCACAACAAAATGAGAAAATGCACTTCTCTAAAGTTGGCAACTTCATTCACAAGAGTTTGTCTTTGTGCACCAATCTCTTCTTACAATGAAATATTTCAACAAGCTGAAATTCCACCAAGGAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAATGGCAACCATATCACACATGAAAGAGTATTTCTTCCAAGTGCAAGAGTTAGCAGCGAAACTAGTCGACGATTTTTTCGAGGAAAGTCCCTCACCGACGACGTTTTGATGCGAAGATTCGTCGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTTATAAGGAAAAGGAATTTGATGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTCATAGCTGAGGAAGAACAAGACTTGTAA

mRNA sequence

ATGGAAATAGTGGGAAGTCAATGGAAAACAAGTTCAAAATCAAGAGAAATCACAATTCCAACAACAAATGGGACATTGAATTCCAAGGGCAATGAATTCTCAGGAATTGGGAATAATTCCAATAATAATAATAATAAGCACAACAAAATGAGAAAATGCACTTCTCTAAAGTTGGCAACTTCATTCACAAGAGTTTGTCTTTGTGCACCAATCTCTTCTTACAATGAAATATTTCAACAAGCTGAAATTCCACCAAGGAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAATGGCAACCATATCACACATGAAAGAGTATTTCTTCCAAGTGCAAGAGTTAGCAGCGAAACTAGTCGACGATTTTTTCGAGGAAAGTCCCTCACCGACGACGTTTTGATGCGAAGATTCGTCGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTTATAAGGAAAAGGAATTTGATGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTCATAGCTGAGGAAGAACAAGACTTGTAA

Coding sequence (CDS)

ATGGAAATAGTGGGAAGTCAATGGAAAACAAGTTCAAAATCAAGAGAAATCACAATTCCAACAACAAATGGGACATTGAATTCCAAGGGCAATGAATTCTCAGGAATTGGGAATAATTCCAATAATAATAATAATAAGCACAACAAAATGAGAAAATGCACTTCTCTAAAGTTGGCAACTTCATTCACAAGAGTTTGTCTTTGTGCACCAATCTCTTCTTACAATGAAATATTTCAACAAGCTGAAATTCCACCAAGGAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAATGGCAACCATATCACACATGAAAGAGTATTTCTTCCAAGTGCAAGAGTTAGCAGCGAAACTAGTCGACGATTTTTTCGAGGAAAGTCCCTCACCGACGACGTTTTGATGCGAAGATTCGTCGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTTATAAGGAAAAGGAATTTGATGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTCATAGCTGAGGAAGAACAAGACTTGTAA

Protein sequence

MEIVGSQWKTSSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKMRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNHITHERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAEEEQDL

Homology

[Close]

BLAST of Cla007035 vs. TrEMBL
Match: A0A0A0KBW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087190 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.5e-78
Identity = 161/196 (82.14%), Postives = 170/196 (86.73%), Query Frame = 1


Query: 1   MEIVGSQWKT-SSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKMRKCTSLKLA 60
           MEIVG+QWKT SSK+REITI T NG  NSK N     GNN NNN++K+NKMRKCTSLK+A
Sbjct: 13  MEIVGTQWKTTSSKAREITIATANGAFNSKANN----GNN-NNNSSKYNKMRKCTSLKIA 72

Query: 61  TSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH----------ITHERV 120
           TSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+          ITHERV
Sbjct: 73  TSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNNNNNNGNNTTNHIITHERV 132

Query: 121 FLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM-RRKK 180
            LPSAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM RRKK
Sbjct: 133 LLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRRKK 192

Query: 181 LGPSPLSKMVIAEEEQ 185
           LGPSPLSKMVIAEEEQ
Sbjct: 193 LGPSPLSKMVIAEEEQ 203

[Close]

BLAST of Cla007035 vs. TrEMBL
Match: B9T0X2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1238650 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-55
Identity = 129/202 (63.86%), Postives = 148/202 (73.27%), Query Frame = 1


Query: 4   VGSQWKTSSKSREIT--------------IPTTNGTL---NSKGNEF---SGIGNNSNNN 63
           + +QWKT SKS E+               IPTTN TL    SK  E    +     +   
Sbjct: 20  MATQWKTISKSTEVPSTNSTLWKLSNPKEIPTTNATLWKSISKSTEIPITTTTTTTTVTT 79

Query: 64  NNKHNKMRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH 123
           N    K+RKCTSL++ATSFTRVCLCAPISSYNE+F+ A+IPPRRS+SYPRSKPFPT    
Sbjct: 80  NPNRGKLRKCTSLRVATSFTRVCLCAPISSYNEVFR-ADIPPRRSNSYPRSKPFPT---- 139

Query: 124 ITHERVFLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNL 183
            T ER+  PSAR S+E  RR FRGKSLTDDVLMRRFVVEEEAMMQ+RRRNQMEVIRKRN+
Sbjct: 140 -TQERI--PSARHSTE-GRRVFRGKSLTDDVLMRRFVVEEEAMMQIRRRNQMEVIRKRNM 199

Query: 184 MRRKKLGPSPLSKMVIAEEEQD 186
           MRRKKLGPSPLSKMV+AEEE++
Sbjct: 200 MRRKKLGPSPLSKMVMAEEEEE 212

[Close]

BLAST of Cla007035 vs. TrEMBL
Match: A5B4G4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027733 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.8e-53
Identity = 121/182 (66.48%), Postives = 141/182 (77.47%), Query Frame = 1


Query: 8   WKTSSKSREITIPTTNGTL---NSKGNEFSGIGNNSNNNNNKHN-KMRKCTSLKLATSFT 67
           WKT SKS EI  PT N TL    SK          +    N H  K+RKCTSL++ATSFT
Sbjct: 91  WKTISKSTEI--PTANTTLWKTISKSAAIRTTTTTTTTTTNPHRQKLRKCTSLRVATSFT 150

Query: 68  RVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNHITHERVFLP-SARVSSETSR 127
           RVCLCAPISSY E+F+ AE+PPRRS+SYPRSKPFP+    I++ R+ +  SARVS+E  R
Sbjct: 151 RVCLCAPISSYTEVFR-AELPPRRSNSYPRSKPFPSPQERISNARISMEGSARVSAE-GR 210

Query: 128 RFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAEE 185
           R FRGKSLTDDVLMRRFVVEEEAM+QVRRRNQMEVIR+R+ MRRKKLGPSPLS+MV+AEE
Sbjct: 211 RVFRGKSLTDDVLMRRFVVEEEAMIQVRRRNQMEVIRRRSAMRRKKLGPSPLSRMVMAEE 268

[Close]

BLAST of Cla007035 vs. TrEMBL
Match: F6HB10_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g00520 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.8e-53
Identity = 121/182 (66.48%), Postives = 141/182 (77.47%), Query Frame = 1


Query: 8   WKTSSKSREITIPTTNGTL---NSKGNEFSGIGNNSNNNNNKHN-KMRKCTSLKLATSFT 67
           WKT SKS EI  PT N TL    SK          +    N H  K+RKCTSL++ATSFT
Sbjct: 24  WKTISKSTEI--PTANTTLWKTISKSAAIRTTTTTTTTTTNPHRQKLRKCTSLRVATSFT 83

Query: 68  RVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNHITHERVFLP-SARVSSETSR 127
           RVCLCAPISSY E+F+ AE+PPRRS+SYPRSKPFP+    I++ R+ +  SARVS+E  R
Sbjct: 84  RVCLCAPISSYTEVFR-AELPPRRSNSYPRSKPFPSPQERISNARISMEGSARVSAE-GR 143

Query: 128 RFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAEE 185
           R FRGKSLTDDVLMRRFVVEEEAM+QVRRRNQMEVIR+R+ MRRKKLGPSPLS+MV+AEE
Sbjct: 144 RVFRGKSLTDDVLMRRFVVEEEAMIQVRRRNQMEVIRRRSAMRRKKLGPSPLSRMVMAEE 201

[Close]

BLAST of Cla007035 vs. TrEMBL
Match: A0A067LAM3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05705 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.0e-52
Identity = 121/194 (62.37%), Postives = 142/194 (73.20%), Query Frame = 1


Query: 4   VGSQWKTSSKSREITIPTTNGTL-----------NSKGNEFSGIGNNSN---NNNNKHNK 63
           + +QWKT SKS EI  PT N TL            +  N +  I  ++      N    K
Sbjct: 33  MATQWKTVSKSTEIP-PTNNVTLWKNVSNPTEIRATNANLWRTISKSAEIPPTTNPNRGK 92

Query: 64  MRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNHITHERV 123
           +RKCTSL++ATSFTRVCLCAPISSYNE+F+ A++PPRRS+SYPRS+PFP +   I     
Sbjct: 93  LRKCTSLRVATSFTRVCLCAPISSYNEVFR-ADVPPRRSNSYPRSRPFPASQERI----- 152

Query: 124 FLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKL 183
             PSAR S+E  RR FRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKR+LMRRK+L
Sbjct: 153 --PSARPSAE-GRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRSLMRRKRL 212

[Close]

BLAST of Cla007035 vs. NCBI nr
Match: gi|449445670|ref|XP_004140595.1| (PREDICTED: probable myosin light chain kinase DDB_G0279831 isoform X2 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 2.1e-78
Identity = 161/196 (82.14%), Postives = 170/196 (86.73%), Query Frame = 1


Query: 1   MEIVGSQWKT-SSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKMRKCTSLKLA 60
           MEIVG+QWKT SSK+REITI T NG  NSK N     GNN NNN++K+NKMRKCTSLK+A
Sbjct: 19  MEIVGTQWKTTSSKAREITIATANGAFNSKANN----GNN-NNNSSKYNKMRKCTSLKIA 78

Query: 61  TSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH----------ITHERV 120
           TSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+          ITHERV
Sbjct: 79  TSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNNNNNNGNNTTNHIITHERV 138

Query: 121 FLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM-RRKK 180
            LPSAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM RRKK
Sbjct: 139 LLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRRKK 198

Query: 181 LGPSPLSKMVIAEEEQ 185
           LGPSPLSKMVIAEEEQ
Sbjct: 199 LGPSPLSKMVIAEEEQ 209

[Close]

BLAST of Cla007035 vs. NCBI nr
Match: gi|778711494|ref|XP_011656743.1| (PREDICTED: probable myosin light chain kinase DDB_G0279831 isoform X1 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 2.1e-78
Identity = 161/196 (82.14%), Postives = 170/196 (86.73%), Query Frame = 1


Query: 1   MEIVGSQWKT-SSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKMRKCTSLKLA 60
           MEIVG+QWKT SSK+REITI T NG  NSK N     GNN NNN++K+NKMRKCTSLK+A
Sbjct: 20  MEIVGTQWKTTSSKAREITIATANGAFNSKANN----GNN-NNNSSKYNKMRKCTSLKIA 79

Query: 61  TSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH----------ITHERV 120
           TSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+          ITHERV
Sbjct: 80  TSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNNNNNNGNNTTNHIITHERV 139

Query: 121 FLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM-RRKK 180
            LPSAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM RRKK
Sbjct: 140 LLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRRKK 199

Query: 181 LGPSPLSKMVIAEEEQ 185
           LGPSPLSKMVIAEEEQ
Sbjct: 200 LGPSPLSKMVIAEEEQ 210

[Close]

BLAST of Cla007035 vs. NCBI nr
Match: gi|700191135|gb|KGN46339.1| (hypothetical protein Csa_6G087190 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 2.1e-78
Identity = 161/196 (82.14%), Postives = 170/196 (86.73%), Query Frame = 1


Query: 1   MEIVGSQWKT-SSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKMRKCTSLKLA 60
           MEIVG+QWKT SSK+REITI T NG  NSK N     GNN NNN++K+NKMRKCTSLK+A
Sbjct: 13  MEIVGTQWKTTSSKAREITIATANGAFNSKANN----GNN-NNNSSKYNKMRKCTSLKIA 72

Query: 61  TSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH----------ITHERV 120
           TSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+          ITHERV
Sbjct: 73  TSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNNNNNNGNNTTNHIITHERV 132

Query: 121 FLPSARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM-RRKK 180
            LPSAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM RRKK
Sbjct: 133 LLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRRKK 192

Query: 181 LGPSPLSKMVIAEEEQ 185
           LGPSPLSKMVIAEEEQ
Sbjct: 193 LGPSPLSKMVIAEEEQ 203

[Close]

BLAST of Cla007035 vs. NCBI nr
Match: gi|659120097|ref|XP_008460011.1| (PREDICTED: serine/threonine-protein kinase pakD isoform X2 [Cucumis melo])

HSP 1 Score: 299.7 bits (766), Expect = 3.6e-78
Identity = 159/192 (82.81%), Postives = 166/192 (86.46%), Query Frame = 1


Query: 1   MEIVGSQWKTSSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKMRKCTSLKLAT 60
           MEIVG+QWKTSSKSREITI T NGT NSK N     GN +NNNN    KMRKCTSLK+AT
Sbjct: 19  MEIVGTQWKTSSKSREITITTPNGTFNSKANN----GNKNNNNN----KMRKCTSLKIAT 78

Query: 61  SFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH--------ITHERVFLP 120
           SFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+        ITHER+ LP
Sbjct: 79  SFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNNNHIITHERILLP 138

Query: 121 SARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM-RRKKLGP 180
           SAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM RRKKLGP
Sbjct: 139 SARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRRKKLGP 198

Query: 181 SPLSKMVIAEEE 184
           SPLSKMVIAEEE
Sbjct: 199 SPLSKMVIAEEE 202

[Close]

BLAST of Cla007035 vs. NCBI nr
Match: gi|659120095|ref|XP_008460010.1| (PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo])

HSP 1 Score: 299.7 bits (766), Expect = 3.6e-78
Identity = 159/192 (82.81%), Postives = 166/192 (86.46%), Query Frame = 1


Query: 1   MEIVGSQWKTSSKSREITIPTTNGTLNSKGNEFSGIGNNSNNNNNKHNKMRKCTSLKLAT 60
           MEIVG+QWKTSSKSREITI T NGT NSK N     GN +NNNN    KMRKCTSLK+AT
Sbjct: 20  MEIVGTQWKTSSKSREITITTPNGTFNSKANN----GNKNNNNN----KMRKCTSLKIAT 79

Query: 61  SFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH--------ITHERVFLP 120
           SFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+        ITHER+ LP
Sbjct: 80  SFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNNNHIITHERILLP 139

Query: 121 SARVSSETSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM-RRKKLGP 180
           SAR+S E+SRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLM RRKKLGP
Sbjct: 140 SARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRRKKLGP 199

Query: 181 SPLSKMVIAEEE 184
           SPLSKMVIAEEE
Sbjct: 200 SPLSKMVIAEEE 203

The following BLAST results are available for this feature:

BLAST of Cla007035 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBW5_CUCSA	1.5e-78	82.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087190 PE=4 SV=1	[more]
B9T0X2_RICCO	1.8e-55	63.86	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1238650 PE=4 SV=1	[more]
A5B4G4_VITVI	4.8e-53	66.48	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027733 PE=4 SV=1	[more]
F6HB10_VITVI	4.8e-53	66.48	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g00520 PE=4 SV=...	[more]
A0A067LAM3_JATCU	4.0e-52	62.37	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05705 PE=4 SV=1	[more]

BLAST of Cla007035 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445670\|ref\|XP_004140595.1\|	2.1e-78	82.14	PREDICTED: probable myosin light chain kinase DDB_G0279831 isoform X2 [Cucumis s...	[more]
gi\|778711494\|ref\|XP_011656743.1\|	2.1e-78	82.14	PREDICTED: probable myosin light chain kinase DDB_G0279831 isoform X1 [Cucumis s...	[more]
gi\|700191135\|gb\|KGN46339.1\|	2.1e-78	82.14	hypothetical protein Csa_6G087190 [Cucumis sativus]	[more]
gi\|659120097\|ref\|XP_008460011.1\|	3.6e-78	82.81	PREDICTED: serine/threonine-protein kinase pakD isoform X2 [Cucumis melo]	[more]
gi\|659120095\|ref\|XP_008460010.1\|	3.6e-78	82.81	PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU70102	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla007035	Cla007035.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU70102	WMU70102	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36772	FAMILY NOT NAMED	coord: 1..186 score: 7.6
None	No IPR available	PANTHER	PTHR36772:SF1	SUBFAMILY NOT NAMED	coord: 1..186 score: 7.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla007035	Cla97C06G110380	Watermelon (97103) v2	wmwmbB407
Cla007035	Csa6G087190	Cucumber (Chinese Long) v2	cuwmB537
Cla007035	MELO3C022424	Melon (DHL92) v3.5.1	mewmB140
Cla007035	ClCG06G001110	Watermelon (Charleston Gray)	wcgwmB345
Cla007035	CSPI06G06710	Wild cucumber (PI 183967)	cpiwmB556
Cla007035	Cucsa.348580	Cucumber (Gy14) v1	cgywmB626
Cla007035	CmaCh08G001840	Cucurbita maxima (Rimu)	cmawmB883
Cla007035	CmoCh08G001890	Cucurbita moschata (Rifu)	cmowmB872
Cla007035	Lsi09G018270	Bottle gourd (USVL1VR-Ls)	lsiwmB041
Cla007035	Cp4.1LG17g10850	Cucurbita pepo (Zucchini)	cpewmB344
Cla007035	CsGy6G006720	Cucumber (Gy14) v2	cgybwmB501
Cla007035	MELO3C022424.2	Melon (DHL92) v3.6.1	medwmB138
Cla007035	Carg05013	Silver-seed gourd	carwmB0084
Cla007035	CsaV3_6G007050	Cucumber (Chinese Long) v3	cucwmB562
Cla007035	Bhi12G002189	Wax gourd	wgowmB107

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None