CSPI06G06710 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGCAAATGCGTTGTTATTTCTTCTCCGATTAATATTCATTTCCACCACTTGTTGGATCTTTTATAATATAAGTTTTGTGTCAATTGACGAAGAAAATGGTATTTCGCAGGAAGCCGTGGTATCAAAGAGCAATGGAAATAGTGGGAACTCAATGGAAAACAACAAGTTCAAAAGCAAGAGAAATCACAATTGCAACAGCAAATGGGGCATTCAATTCCAAGGCAAATAATGGGAATAACAACAATAGTAGCAAGTACAACAAAATGAGAAAATGCACTTCTCTAAAGATAGCAACTTCATTCACAAGAGTATGTCTTTGTGCACCAATCTCTTCTTACAATGAAATTTTTCAACAAGCTGAAATTCCACCAAGAAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAACAATAATAATAACAATGGCAATAATACTACTAATCATATTATCACACATGAAAGAGTACTTCTTCCAAGTGCAAGACTTAGCGGCGAAAGTAGTCGACGGTTTTTTCGAGGAAAGTCTCTCACGGACGACGTTTTGATGCGGAGATTCGTGGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTAATAAGGAAAAGGAATTTGATGAGGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTAATAGCTGAGGAAGAAAAATGCCATACATTTAATATATAATAATTTAGCCTCA ATGGTATTTCGCAGGAAGCCGTGGTATCAAAGAGCAATGGAAATAGTGGGAACTCAATGGAAAACAACAAGTTCAAAAGCAAGAGAAATCACAATTGCAACAGCAAATGGGGCATTCAATTCCAAGGCAAATAATGGGAATAACAACAATAGTAGCAAGTACAACAAAATGAGAAAATGCACTTCTCTAAAGATAGCAACTTCATTCACAAGAGTATGTCTTTGTGCACCAATCTCTTCTTACAATGAAATTTTTCAACAAGCTGAAATTCCACCAAGAAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAACAATAATAATAACAATGGCAATAATACTACTAATCATATTATCACACATGAAAGAGTACTTCTTCCAAGTGCAAGACTTAGCGGCGAAAGTAGTCGACGGTTTTTTCGAGGAAAGTCTCTCACGGACGACGTTTTGATGCGGAGATTCGTGGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTAATAAGGAAAAGGAATTTGATGAGGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTAATAGCTGAGGAAGAAAAATGCCATACATTTAATATATAA ATGGTATTTCGCAGGAAGCCGTGGTATCAAAGAGCAATGGAAATAGTGGGAACTCAATGGAAAACAACAAGTTCAAAAGCAAGAGAAATCACAATTGCAACAGCAAATGGGGCATTCAATTCCAAGGCAAATAATGGGAATAACAACAATAGTAGCAAGTACAACAAAATGAGAAAATGCACTTCTCTAAAGATAGCAACTTCATTCACAAGAGTATGTCTTTGTGCACCAATCTCTTCTTACAATGAAATTTTTCAACAAGCTGAAATTCCACCAAGAAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAACAATAATAATAACAATGGCAATAATACTACTAATCATATTATCACACATGAAAGAGTACTTCTTCCAAGTGCAAGACTTAGCGGCGAAAGTAGTCGACGGTTTTTTCGAGGAAAGTCTCTCACGGACGACGTTTTGATGCGGAGATTCGTGGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTAATAAGGAAAAGGAATTTGATGAGGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTAATAGCTGAGGAAGAAAAATGCCATACATTTAATATATAA
BLAST of CSPI06G06710 vs. TrEMBL
Match: A0A0A0KBW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087190 PE=4 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 3.4e-108 Identity = 207/209 (99.04%), Postives = 208/209 (99.52%), Query Frame = 1
BLAST of CSPI06G06710 vs. TrEMBL
Match: B9T0X2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1238650 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.8e-49 Identity = 132/230 (57.39%), Postives = 147/230 (63.91%), Query Frame = 1
BLAST of CSPI06G06710 vs. TrEMBL
Match: F6HB10_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g00520 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 3.4e-47 Identity = 123/207 (59.42%), Postives = 147/207 (71.01%), Query Frame = 1
BLAST of CSPI06G06710 vs. TrEMBL
Match: A0A067LAM3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05705 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 4.4e-47 Identity = 125/217 (57.60%), Postives = 146/217 (67.28%), Query Frame = 1
BLAST of CSPI06G06710 vs. TrEMBL
Match: A5B4G4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027733 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.3e-46 Identity = 122/206 (59.22%), Postives = 146/206 (70.87%), Query Frame = 1
BLAST of CSPI06G06710 vs. TAIR10
Match: AT3G59680.2 (AT3G59680.2 unknown protein) HSP 1 Score: 170.6 bits (431), Expect = 1.0e-42 Identity = 99/202 (49.01%), Postives = 136/202 (67.33%), Query Frame = 1
BLAST of CSPI06G06710 vs. NCBI nr
Match: gi|700191135|gb|KGN46339.1| (hypothetical protein Csa_6G087190 [Cucumis sativus]) HSP 1 Score: 399.1 bits (1024), Expect = 4.9e-108 Identity = 207/209 (99.04%), Postives = 208/209 (99.52%), Query Frame = 1
BLAST of CSPI06G06710 vs. NCBI nr
Match: gi|449445670|ref|XP_004140595.1| (PREDICTED: probable myosin light chain kinase DDB_G0279831 isoform X2 [Cucumis sativus]) HSP 1 Score: 391.7 bits (1005), Expect = 7.8e-106 Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 1
BLAST of CSPI06G06710 vs. NCBI nr
Match: gi|778711494|ref|XP_011656743.1| (PREDICTED: probable myosin light chain kinase DDB_G0279831 isoform X1 [Cucumis sativus]) HSP 1 Score: 391.7 bits (1005), Expect = 7.8e-106 Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 1
BLAST of CSPI06G06710 vs. NCBI nr
Match: gi|659120095|ref|XP_008460010.1| (PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo]) HSP 1 Score: 342.4 bits (877), Expect = 5.5e-91 Identity = 183/197 (92.89%), Postives = 188/197 (95.43%), Query Frame = 1
BLAST of CSPI06G06710 vs. NCBI nr
Match: gi|659120097|ref|XP_008460011.1| (PREDICTED: serine/threonine-protein kinase pakD isoform X2 [Cucumis melo]) HSP 1 Score: 342.4 bits (877), Expect = 5.5e-91 Identity = 183/197 (92.89%), Postives = 188/197 (95.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |