CmaCh06G016490 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G016490
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	UPF0454 protein C12orf49 like
Location	Cma_Chr06 : 10227884 .. 10230449 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCCGACACGCGGGAAGGTGCTGAATCCGATCAAATGCCGGCTTCTCAAAAGATTCTAATTTCTGAGTTTTAATTATTGATCAGATAACAGAACATCAATGCATCGTTTCAGTTTATCGATCGTATTCTTCCAATTTTTCCTCTTCTTTCCTTCAAGAATTTCTGCGATCAGGTGAAAATTTCCACTATCCGTTTTTAATTCCTTCCATTCCCATTCTGAGATTTTGGCGTTTCATACTGTTCTGCATCCATTACAATTAAAAAAAAAACGAAGAAAGTTGCTGTTCAGATTCTTGAATCTTTGAATCCTGCTAAAATGTATTTCTCTTCAGTTTCGTTAGTTTTCTCAACGCTCCTGTGCCATTTTGTTCACTTTTTCTTGTTTTTTTATTGAAGGAATCATATAGGCTTAGCAGTAAAGAACACATGTAGGAGCACTATTCAGGGAAGATATTTACTGACGGATGATAATGGTAAATATTTCTTTCATTATCTCGTAGTGCTACTTCAGGTCTTCGTTCTTTTTTTACAGTTACCTTGAAAATCCCTGAATAATATTCTGCGATTGAAGACATGCTTTTGTTAGAAATTGCTAGTAACTCACAGAACCTAATGGATATAGCTTCCATTGCAGGTCGTGTATGTGATGCTTTATCTATTGATCCACTATCTCATTGCTGCCTTGGCAAAGGGGACAAATTTTCTTGTCAGTGAGTTTTTTTTTTTTTTTTTACCTTTTTTTCCAAATAAATCTCCCTCCAATGGCCCATGAGGAGTGTAAGAGCTCTGTCAAGCTACCTTATTGTTTGTTTTTTCTTTTTACACGTTGCAGTGGGTGCAATCTTGTTTCACAATGTTGCAATTCGTATGAATATTGTGTTTCATGCTGCCTAAATCCTTCAAAGGTATGATGGGTTTCTGATTCTTCTTATGCTTCATTTTTGCTATGGAATCTAAAAACTGGTGCATTTTTGGATGATGATGGTTGCAGACAAAAGGAGAACAAATACTAAAAATCAAAATTTCCAAGCCAGCCACGGCAGGTGATGACTAACGCTCTATATATTAATGTAACAGTTCAAGCCCACCGCTAGTAGATCTTGTATTCTTTGGACTTTTTCTTCAAGGTTTTAAAATACTATTGCTAGGGAGAGGTTTCCACACACTTATAAATAATATTTTATTCTCCTCCCCAACTGATGTGAGATCTTATAATCCACCCCCTTCAAAGTCCAATGTTCTCGTTGACAATCATTTCCTTCTCCAATCGATGCGGGATCCCAATCCACCTCCCTTTGAGACCCAACGTCCTTGCTGGTTCACTACCTCGTGTCTAATCCCCTTCGAGGCTCAGCCTCCTCTCTAGTACATCACCCGATGTCTGGCTCTGATATCATTTGTAATGGCCCAAATCCACCGCTAGCACATATTATTCTCTTTGGGTTTTCCCTTTCGGGCTTCTCTTCAAAGTTTTTAAAACACGTTTGTAGGAAGAAATTTTCTCACTCTTATAAAAAATGTTTCGTTCTCCGTCCCAACTAACGTGGGATCTCACCGTTAATGTTTTGGAAGAGTATTTTACTATTAATATTCATGTGAAGCTTACTTTTCATTTAAGGAATCATTCCCCTTGGAGTGGATTTGAGATCATAATTTAGTCTGAGATTAAATATATGAAACTATGGTAAATGATGCAGGGACATATGCCAGTGTCTTTGATTTCTGTGCTGGGAGGTGTCGTCATAATTCTGAGAGTGTTGTAAGTGTCCTGCATTGTGTTACTGCATTTTATCTTTCTTTAGAGAGTTGAAATATTTGATTGAATTTCAAATTCTCAGGTGCATGAAAATGCTTATCACGGTGATTACCATCATTGCTTTTCCCTGCCATCATATTCTTCAGGTTAGCTACTGATTTCTGAATTCAAACCATGTAGTCATTATAGTTTCTTTAAGCATTCTGTGATGTTTATGATTTATTTCCAAAGTTTGGACTTCGTAGGAGTGAGCAGCACACAACTAGAATTCAGACTGAATGGCATCAATGTCATTGTTGGAAGGTCAGGGTAGCCATGTTTGTTTATTTTATACACTGTTTGATCTCTATCTTACTCTTCTGAACTGAATCTATGATAGACAAGGAGAATCATGTGATTCAGTTTGCAAGTCAAATGGACAATCATGCGTCTCAAACAAGATTTTGGTCCTAAATCATTGTGACATGTGAGTAATCTGCTGTTTTCTTTTCCTTCGTTTCTTATGGAGCCATTAAAACATGTTTTTTCTAATTTGGGTATGATAGAATACAAAAATACATGAGCTGCAAAGGAGGTTGCATAGAAAGTGTTGGGCCTGATCACCCTGCTGAAGTTGCTTATAATGCTCCTGAAGAACTGGTACGGTGTCCTGTTCTTTATGTATAGCACTTACATACGAGTTTTATAGCACATTTTGTTTATCTTATGAACTTCAGAATCCAGGAGCATGCTTATATAGTAGCGCACAGTCAATACTTACTTGTGATGGCTCACACCCACATACCATGAGACTTTGCCCTTGTGCGTAG

mRNA sequence

GATCCGACACGCGGGAAGGTGCTGAATCCGATCAAATGCCGGCTTCTCAAAAGATTCTAATTTCTGAGTTTTAATTATTGATCAGATAACAGAACATCAATGCATCGTTTCAGTTTATCGATCGTATTCTTCCAATTTTTCCTCTTCTTTCCTTCAAGAATTTCTGCGATCAGGAATCATATAGGCTTAGCAGTAAAGAACACATGTAGGAGCACTATTCAGGGAAGATATTTACTGACGGATGATAATGGTCGTGTATGTGATGCTTTATCTATTGATCCACTATCTCATTGCTGCCTTGGCAAAGGGGACAAATTTTCTTGTCATGGGTGCAATCTTGTTTCACAATGTTGCAATTCGTATGAATATTGTGTTTCATGCTGCCTAAATCCTTCAAAGACAAAAGGAGAACAAATACTAAAAATCAAAATTTCCAAGCCAGCCACGGCAGGGACATATGCCAGTGTCTTTGATTTCTGTGCTGGGAGGTGTCGTCATAATTCTGAGAGTGTTGTGCATGAAAATGCTTATCACGGTGATTACCATCATTGCTTTTCCCTGCCATCATATTCTTCAGGAGTGAGCAGCACACAACTAGAATTCAGACTGAATGGCATCAATGTCATTGTTGGAAGACAAGGAGAATCATGTGATTCAGTTTGCAAGTCAAATGGACAATCATGCGTCTCAAACAAGATTTTGGTCCTAAATCATTGTGACATAATACAAAAATACATGAGCTGCAAAGGAGGTTGCATAGAAAGTGTTGGGCCTGATCACCCTGCTGAAGTTGCTTATAATGCTCCTGAAGAACTGAATCCAGGAGCATGCTTATATAGTAGCGCACAGTCAATACTTACTTGTGATGGCTCACACCCACATACCATGAGACTTTGCCCTTGTGCGTAG

Coding sequence (CDS)

ATGCATCGTTTCAGTTTATCGATCGTATTCTTCCAATTTTTCCTCTTCTTTCCTTCAAGAATTTCTGCGATCAGGAATCATATAGGCTTAGCAGTAAAGAACACATGTAGGAGCACTATTCAGGGAAGATATTTACTGACGGATGATAATGGTCGTGTATGTGATGCTTTATCTATTGATCCACTATCTCATTGCTGCCTTGGCAAAGGGGACAAATTTTCTTGTCATGGGTGCAATCTTGTTTCACAATGTTGCAATTCGTATGAATATTGTGTTTCATGCTGCCTAAATCCTTCAAAGACAAAAGGAGAACAAATACTAAAAATCAAAATTTCCAAGCCAGCCACGGCAGGGACATATGCCAGTGTCTTTGATTTCTGTGCTGGGAGGTGTCGTCATAATTCTGAGAGTGTTGTGCATGAAAATGCTTATCACGGTGATTACCATCATTGCTTTTCCCTGCCATCATATTCTTCAGGAGTGAGCAGCACACAACTAGAATTCAGACTGAATGGCATCAATGTCATTGTTGGAAGACAAGGAGAATCATGTGATTCAGTTTGCAAGTCAAATGGACAATCATGCGTCTCAAACAAGATTTTGGTCCTAAATCATTGTGACATAATACAAAAATACATGAGCTGCAAAGGAGGTTGCATAGAAAGTGTTGGGCCTGATCACCCTGCTGAAGTTGCTTATAATGCTCCTGAAGAACTGAATCCAGGAGCATGCTTATATAGTAGCGCACAGTCAATACTTACTTGTGATGGCTCACACCCACATACCATGAGACTTTGCCCTTGTGCGTAG

Protein sequence

MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSIDPLSHCCLGKGDKFSCHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTYASVFDFCAGRCRHNSESVVHENAYHGDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRQGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELNPGACLYSSAQSILTCDGSHPHTMRLCPCA

Homology

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BLAST of CmaCh06G016490 vs. Swiss-Prot
Match: CL049_MOUSE (UPF0454 protein C12orf49 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.4e-16
Identity = 47/119 (39.50%), Postives = 73/119 (61.34%), Query Frame = 1


Query: 34  NTCRSTIQGRYLLTDDNGRVCDALSIDPLSHCC---LGKGDKFSCHGCNLVSQCCNSYEY 93
           N CR+++QG++LLTD+ G VC+   +   + CC   +    ++ C GC L + CC +YEY
Sbjct: 73  NQCRNSVQGKHLLTDELGYVCERKDL-LANGCCDVSVPSTKQYCCDGC-LANGCCEAYEY 132

Query: 94  CVSCCLNPSKTKGEQILKIKISKPATA--GTYASV---FDFCAGRCRHNSESVVHENAY 145
           CVSCCL PSK   + +L+  +++ A A    + +V   F+ C  +CR +S+SV HEN Y
Sbjct: 133 CVSCCLQPSK---QLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTY 186

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BLAST of CmaCh06G016490 vs. Swiss-Prot
Match: CL049_BOVIN (UPF0454 protein C12orf49 homolog OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = 1


Query: 34  NTCRSTIQGRYLLTDDNGRVCDALSIDPLSHCC---LGKGDKFSCHGCNLVSQCCNSYEY 93
           N CR++IQG++L+TD+ G VC+   +  ++ CC   +    ++ C GC L S CC++YEY
Sbjct: 73  NQCRNSIQGKHLITDELGYVCERRDL-LVNGCCNVNVPGTKQYCCDGC-LSSGCCSAYEY 132

Query: 94  CVSCCLNPSKTKGEQILKIKISKPATA--GTYASV---FDFCAGRCRHNSESVVHENAY 145
           CVSCCL P+K   + +L+  +++ A A    + +V   F+ C  +CR +S+SV HEN Y
Sbjct: 133 CVSCCLQPNK---QLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTY 186

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BLAST of CmaCh06G016490 vs. Swiss-Prot
Match: CL049_CHICK (UPF0454 protein C12orf49 homolog OS=Gallus gallus GN=RCJMB04_18o22 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.7e-15
Identity = 46/124 (37.10%), Postives = 74/124 (59.68%), Query Frame = 1


Query: 29  GLAVKNTCRSTIQGRYLLTDDNGRVCDALSIDPLSHCC---LGKGDKFSCHGCNLVSQCC 88
           G  + N CR+++QG+ L+TD+ G +C+   +  ++ CC   +     +SC  C L + CC
Sbjct: 68  GSHLSNQCRNSVQGKLLITDELGYICERKDL-LVNGCCNVNVPSTKLYSCDSC-LPNGCC 127

Query: 89  NSYEYCVSCCLNPSKTKGEQILKIKISKPATA--GTYASV---FDFCAGRCRHNSESVVH 145
           + YEYCVSCCL PSK   + +L+  +++ A A    + +V   F+ C  +CR +S+SV H
Sbjct: 128 SVYEYCVSCCLQPSK---QHLLERFLNRAAMAFQNLFMAVEDRFELCLAKCRTSSQSVQH 186

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BLAST of CmaCh06G016490 vs. Swiss-Prot
Match: CL049_HUMAN (UPF0454 protein C12orf49 OS=Homo sapiens GN=C12orf49 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.2e-15
Identity = 45/119 (37.82%), Postives = 74/119 (62.18%), Query Frame = 1


Query: 34  NTCRSTIQGRYLLTDDNGRVCDALSIDPLSHCC---LGKGDKFSCHGCNLVSQCCNSYEY 93
           N CR++IQG++L+TD+ G VC+   +  ++ CC   +    ++ C GC   + CC++YEY
Sbjct: 73  NQCRNSIQGKHLITDELGYVCERKDL-LVNGCCNVNVPSTKQYCCDGC-WPNGCCSAYEY 132

Query: 94  CVSCCLNPSKTKGEQILKIKISKPATA--GTYASV---FDFCAGRCRHNSESVVHENAY 145
           CVSCCL P+K   + +L+  +++ A A    + +V   F+ C  +CR +S+SV HEN Y
Sbjct: 133 CVSCCLQPNK---QLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTY 186

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BLAST of CmaCh06G016490 vs. Swiss-Prot
Match: CL049_XENLA (UPF0454 protein C12orf49 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.4e-14
Identity = 47/130 (36.15%), Postives = 74/130 (56.92%), Query Frame = 1


Query: 32  VKNTCRSTIQGRYLLTDDNGRVCDALSIDPLSHCC---LGKGDKFSCHGCNLVSQCCNSY 91
           + N CR+++QG+ L+TDD G +C+   +   + CC   +     +SC  C L + CC+ Y
Sbjct: 71  ISNQCRNSVQGKLLVTDDMGYICERKEL-LANGCCNINVASTKLYSCETC-LPNGCCSVY 130

Query: 92  EYCVSCCLNPSKTKGEQILKIKISKPATA--GTYASV---FDFCAGRCRHNSESVVHENA 151
           E+CVSCCL P+K   +  L+  ++K A A    + +V   F+ C  +CR +S+SV HEN 
Sbjct: 131 EFCVSCCLQPNK---QLQLERFLNKAAVAFQNLFQAVEDHFELCLAKCRTSSQSVQHENT 190

Query: 152 YHGDY-HHCF 153
           Y      HC+
Sbjct: 191 YRNPIAKHCY 195

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BLAST of CmaCh06G016490 vs. TrEMBL
Match: A0A0A0KW54_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015790 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 8.8e-133
Identity = 220/269 (81.78%), Postives = 245/269 (91.08%), Query Frame = 1


Query: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSID 60
           +HRF L+ +FFQF   FPS IS+IR +IGLAV ++CRST+QGRYLL+DDNG VCDALS+D
Sbjct: 3   IHRFHLTFLFFQFLFLFPSTISSIRTNIGLAVNSSCRSTVQGRYLLSDDNGYVCDALSVD 62

Query: 61  PLSHCCLGKGDKFSCHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTY 120
           PLS CC GKG+KF CHGCNLV QCCNSYEYCVSCC NPS+TK EQILKIKI+KPATAGTY
Sbjct: 63  PLSRCCHGKGEKFPCHGCNLVLQCCNSYEYCVSCCQNPSRTKREQILKIKIAKPATAGTY 122

Query: 121 ASVFDFCAGRCRHNSESVVHENAYHGDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRQ 180
           ASVFDFC GRCRHNSESVVHENAYH  +HHCFSLPSYSSG +STQLEFRL+GINVI+GRQ
Sbjct: 123 ASVFDFCVGRCRHNSESVVHENAYHSAFHHCFSLPSYSSGDNSTQLEFRLSGINVIIGRQ 182

Query: 181 GESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELN 240
           GESCDSVCKSNGQSCV NKILVLNHCDI+QKY+SCKGGC+ SVG D PAEVAY+AP+ELN
Sbjct: 183 GESCDSVCKSNGQSCVPNKILVLNHCDIMQKYLSCKGGCLASVGTDQPAEVAYDAPKELN 242

Query: 241 PGACLYSSAQSILTCDGSHPHTMRLCPCA 270
           PGACLYSSAQS+++CDGSHPHT RLCPCA
Sbjct: 243 PGACLYSSAQSMVSCDGSHPHTKRLCPCA 271

[Close]

BLAST of CmaCh06G016490 vs. TrEMBL
Match: A0A061EKH0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_020048 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.5e-111
Identity = 192/268 (71.64%), Postives = 222/268 (82.84%), Query Frame = 1


Query: 3   RFSLSIVFFQFFLF-FPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSIDP 62
           R  LS VFFQ  L  F   ISA R  IG   +  CR+T+QGRYLL+DDNG VCDALS+DP
Sbjct: 7   RLILSWVFFQQLLVQFSFTISANRKEIGFPERRICRTTVQGRYLLSDDNGYVCDALSLDP 66

Query: 63  LSHCCLGKGDKFSCHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTYA 122
            S CC  +GDKFSCHGCN++SQCCNSYE+CVSCCL+P++ + EQ+LK+KI+KPATAG Y 
Sbjct: 67  ESRCCPERGDKFSCHGCNILSQCCNSYEFCVSCCLHPAQIQKEQVLKLKIAKPATAGAYL 126

Query: 123 SVFDFCAGRCRHNSESVVHENAYHGDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRQG 182
           SVFDFCAGRCRH+SESVVHENAY  D+HHCFSLPS S+G S T +E RL+GINVI+GRQG
Sbjct: 127 SVFDFCAGRCRHSSESVVHENAYVSDFHHCFSLPSNSTGSSVTPVEARLHGINVIIGRQG 186

Query: 183 ESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELNP 242
           ESCDSVC+SNGQSCV NK+LVLN CDIIQKYMSCKG C+ SVG D PAEV Y+AP+ LNP
Sbjct: 187 ESCDSVCRSNGQSCVLNKLLVLNQCDIIQKYMSCKGACLASVGADQPAEVVYDAPKHLNP 246

Query: 243 GACLYSSAQSILTCDGSHPHTMRLCPCA 270
           GACLY+  QS+L+CDGSH HT RLCPCA
Sbjct: 247 GACLYTRTQSMLSCDGSHLHTKRLCPCA 274

[Close]

BLAST of CmaCh06G016490 vs. TrEMBL
Match: A0A067LGY9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20840 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 9.5e-111
Identity = 182/255 (71.37%), Postives = 217/255 (85.10%), Query Frame = 1


Query: 15  LFFPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSIDPLSHCCLGKGDKFS 74
           LF P  ISAIR  IG    N CR+T+QGR+LL+DD G VCDALS+DPLS CC  KG+KFS
Sbjct: 16  LFLPG-ISAIRKDIGFQELNLCRNTVQGRFLLSDDKGHVCDALSLDPLSRCCPEKGEKFS 75

Query: 75  CHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTYASVFDFCAGRCRHN 134
           CHGCNL+SQCCNSYE+CVSCCLNP++T+ ++++K+K++KP+TAGTYAS+FDFCAGRCRHN
Sbjct: 76  CHGCNLLSQCCNSYEFCVSCCLNPARTREKEVMKLKVAKPSTAGTYASIFDFCAGRCRHN 135

Query: 135 SESVVHENAYHGDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRQGESCDSVCKSNGQS 194
           SESVVHENAY  D+HHCFSLPS SSG + TQLE RL GINV++GRQG+SCDS CKSNGQS
Sbjct: 136 SESVVHENAYLSDFHHCFSLPSNSSGANHTQLEARLVGINVVIGRQGKSCDSACKSNGQS 195

Query: 195 CVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELNPGACLYSSAQSILT 254
           CV NK+LVLN CDI+QKY+SCKG C+ S+G D PAEV  +AP+  NPGACLY+  QS+L+
Sbjct: 196 CVLNKLLVLNQCDIMQKYLSCKGACLASIGADQPAEVVDDAPKHSNPGACLYTRTQSMLS 255

Query: 255 CDGSHPHTMRLCPCA 270
           CDGSH HT RLCPCA
Sbjct: 256 CDGSHHHTRRLCPCA 269

[Close]

BLAST of CmaCh06G016490 vs. TrEMBL
Match: A0A0D2UT25_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G143000 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 1.6e-110
Identity = 189/266 (71.05%), Postives = 221/266 (83.08%), Query Frame = 1


Query: 5   SLSIVFFQFFLF-FPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSIDPLS 64
           SLS VF    LF   S I+A R  IG   +  CR+T+QGRYLL+DDNG VCDALS+DP  
Sbjct: 9   SLSWVFVIQLLFQSSSTIAATRKEIGFPERRICRTTVQGRYLLSDDNGYVCDALSLDPQY 68

Query: 65  HCCLGKGDKFSCHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTYASV 124
            CC  +GDKFSC GCN++SQCCNSYE+CVSCCL+P++T+ EQ+LK+KI+KP+T+GTY SV
Sbjct: 69  RCCPERGDKFSCRGCNVLSQCCNSYEFCVSCCLHPARTQKEQVLKLKIAKPSTSGTYLSV 128

Query: 125 FDFCAGRCRHNSESVVHENAYHGDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRQGES 184
           FDFCAGRCRHNSESVVHENAY  D+HHCFSLPS SSG S + +E RLNGINV++GRQGES
Sbjct: 129 FDFCAGRCRHNSESVVHENAYVNDFHHCFSLPSNSSGSSISPVEARLNGINVVIGRQGES 188

Query: 185 CDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELNPGA 244
           CDSVCKSNGQSCV NK+L+LN CDIIQKYMSCKG C+ SVGPD PAEV  +AP+ LNPGA
Sbjct: 189 CDSVCKSNGQSCVLNKLLILNQCDIIQKYMSCKGACLASVGPDQPAEVVDDAPKNLNPGA 248

Query: 245 CLYSSAQSILTCDGSHPHTMRLCPCA 270
           CLY+  QS+L+CDGSH HT RLCPCA
Sbjct: 249 CLYTRTQSMLSCDGSHRHTRRLCPCA 274

[Close]

BLAST of CmaCh06G016490 vs. TrEMBL
Match: W9RBY3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001149 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 6.2e-110
Identity = 184/262 (70.23%), Postives = 216/262 (82.44%), Query Frame = 1


Query: 8   IVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSIDPLSHCCL 67
           ++ F F L    + +AIR  IG   K  CR+T+QGRYL++DDNG VCDALS+DP S CC 
Sbjct: 15  LIIFHFSL----KAAAIRKDIGFQEKGICRNTVQGRYLMSDDNGYVCDALSVDPESRCCP 74

Query: 68  GKGDKFSCHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTYASVFDFC 127
             GDKFSC GCNL+SQCCNSYEYCVSCCLNPSKT  + ++K+KI+KP TAGTYASVFDFC
Sbjct: 75  ELGDKFSCQGCNLLSQCCNSYEYCVSCCLNPSKTLQQHVIKVKIAKPTTAGTYASVFDFC 134

Query: 128 AGRCRHNSESVVHENAYHGDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRQGESCDSV 187
           AGRCRHNS+SVVHENAY  D+HHCFS+PS S G +STQ+E RL+GIN++VGRQGESCDSV
Sbjct: 135 AGRCRHNSDSVVHENAYLSDFHHCFSMPSKSQGANSTQVEARLSGINIVVGRQGESCDSV 194

Query: 188 CKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELNPGACLYS 247
           CK NGQSCV NK+LVLN CDI+QKYM CKG C+ S+G D PAEVA +AP+ LNPGACLY+
Sbjct: 195 CKLNGQSCVPNKLLVLNQCDIMQKYMRCKGACLASMGADQPAEVADDAPKHLNPGACLYT 254

Query: 248 SAQSILTCDGSHPHTMRLCPCA 270
             QS+L+CDGSH HT RLCPCA
Sbjct: 255 RTQSMLSCDGSHQHTRRLCPCA 272

[Close]

BLAST of CmaCh06G016490 vs. TAIR10
Match: AT3G59390.2 (AT3G59390.2 unknown protein)

HSP 1 Score: 382.1 bits (980), Expect = 2.8e-106
Identity = 170/273 (62.27%), Postives = 217/273 (79.49%), Query Frame = 1


Query: 1   MHRFSLSIVFFQFFLF----FPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDA 60
           M +   S++F    L     FP R+SAIR  IG   + +CR+T+QGRYL++DD G VCDA
Sbjct: 1   MSKSGFSLLFLVLLLIMGFLFPLRVSAIRKDIGFLEERSCRTTVQGRYLISDDEGNVCDA 60

Query: 61  LSIDPLSHCCLGKGDKFSCHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPAT 120
           LS++  + CC  KG++FSCHGCN++SQCCNSYE+CVSCCLNPS+T  E+++K+K++KPAT
Sbjct: 61  LSLESRTRCCPWKGERFSCHGCNILSQCCNSYEFCVSCCLNPSQTLLEKVVKVKVAKPAT 120

Query: 121 AGTYASVFDFCAGRCRHNSESVVHENAYHGDYHHCFSLPSYSSGVSSTQLEFRLNGINVI 180
           +GTY SVFDFCAGRCRHNSESVVHENAYH ++HHCFSL S +SG + TQ+E RL GI+VI
Sbjct: 121 SGTYKSVFDFCAGRCRHNSESVVHENAYHSEFHHCFSLTSNASGANLTQVETRLLGIDVI 180

Query: 181 VGRQGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAP 240
           VG QG+SCD+VCKS GQ CV NK+ +LN CD++++YM+CKG C+ S G D PAEV  +AP
Sbjct: 181 VGSQGDSCDAVCKSRGQLCVMNKLSLLNQCDVMKRYMNCKGSCLASAGADQPAEVVEDAP 240

Query: 241 EELNPGACLYSSAQSILTCDGSHPHTMRLCPCA 270
            +L PGACLY+  QS+L+CDGSH HT RLCPCA
Sbjct: 241 RDLYPGACLYTRTQSLLSCDGSHQHTRRLCPCA 273

[Close]

BLAST of CmaCh06G016490 vs. NCBI nr
Match: gi|659108032|ref|XP_008453981.1| (PREDICTED: uncharacterized protein LOC103494541 [Cucumis melo])

HSP 1 Score: 484.6 bits (1246), Expect = 1.1e-133
Identity = 221/269 (82.16%), Postives = 246/269 (91.45%), Query Frame = 1


Query: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSID 60
           +HRF L+ +FFQFF  FPS ISAIR +IGLAV ++CRST+QGRYLL+DDNG VCDALS+D
Sbjct: 3   IHRFDLTFLFFQFFFLFPSTISAIRTNIGLAVNSSCRSTVQGRYLLSDDNGYVCDALSVD 62

Query: 61  PLSHCCLGKGDKFSCHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTY 120
           PLS CC GKG+KF CHGCNLV QCCNSYEYCVSCC NPS+TK EQILKIKI+KPATAGTY
Sbjct: 63  PLSRCCHGKGEKFPCHGCNLVLQCCNSYEYCVSCCQNPSRTKREQILKIKIAKPATAGTY 122

Query: 121 ASVFDFCAGRCRHNSESVVHENAYHGDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRQ 180
           AS+FDFC GRCRHNSESVVHENAYH  +HHCFSLPSYSSG +STQLEFRL+GINVI+GRQ
Sbjct: 123 ASIFDFCVGRCRHNSESVVHENAYHSAFHHCFSLPSYSSGDNSTQLEFRLSGINVIIGRQ 182

Query: 181 GESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELN 240
           GESCDSVCKSNGQSCV NKILVLNHCDI+QKY+SCKGGC+ SVG D PAEVAY+AP+ELN
Sbjct: 183 GESCDSVCKSNGQSCVPNKILVLNHCDIMQKYLSCKGGCLASVGTDQPAEVAYDAPKELN 242

Query: 241 PGACLYSSAQSILTCDGSHPHTMRLCPCA 270
           PGACLYSSAQS+++CDGSHPHT RLCPCA
Sbjct: 243 PGACLYSSAQSMVSCDGSHPHTKRLCPCA 271

[Close]

BLAST of CmaCh06G016490 vs. NCBI nr
Match: gi|778690047|ref|XP_011653057.1| (PREDICTED: uncharacterized protein LOC101217783 [Cucumis sativus])

HSP 1 Score: 481.1 bits (1237), Expect = 1.3e-132
Identity = 220/269 (81.78%), Postives = 245/269 (91.08%), Query Frame = 1


Query: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSID 60
           +HRF L+ +FFQF   FPS IS+IR +IGLAV ++CRST+QGRYLL+DDNG VCDALS+D
Sbjct: 3   IHRFHLTFLFFQFLFLFPSTISSIRTNIGLAVNSSCRSTVQGRYLLSDDNGYVCDALSVD 62

Query: 61  PLSHCCLGKGDKFSCHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTY 120
           PLS CC GKG+KF CHGCNLV QCCNSYEYCVSCC NPS+TK EQILKIKI+KPATAGTY
Sbjct: 63  PLSRCCHGKGEKFPCHGCNLVLQCCNSYEYCVSCCQNPSRTKREQILKIKIAKPATAGTY 122

Query: 121 ASVFDFCAGRCRHNSESVVHENAYHGDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRQ 180
           ASVFDFC GRCRHNSESVVHENAYH  +HHCFSLPSYSSG +STQLEFRL+GINVI+GRQ
Sbjct: 123 ASVFDFCVGRCRHNSESVVHENAYHSAFHHCFSLPSYSSGDNSTQLEFRLSGINVIIGRQ 182

Query: 181 GESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELN 240
           GESCDSVCKSNGQSCV NKILVLNHCDI+QKY+SCKGGC+ SVG D PAEVAY+AP+ELN
Sbjct: 183 GESCDSVCKSNGQSCVPNKILVLNHCDIMQKYLSCKGGCLASVGTDQPAEVAYDAPKELN 242

Query: 241 PGACLYSSAQSILTCDGSHPHTMRLCPCA 270
           PGACLYSSAQS+++CDGSHPHT RLCPCA
Sbjct: 243 PGACLYSSAQSMVSCDGSHPHTKRLCPCA 271

[Close]

BLAST of CmaCh06G016490 vs. NCBI nr
Match: gi|590655363|ref|XP_007033966.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 409.8 bits (1052), Expect = 3.6e-111
Identity = 192/268 (71.64%), Postives = 222/268 (82.84%), Query Frame = 1


Query: 3   RFSLSIVFFQFFLF-FPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSIDP 62
           R  LS VFFQ  L  F   ISA R  IG   +  CR+T+QGRYLL+DDNG VCDALS+DP
Sbjct: 7   RLILSWVFFQQLLVQFSFTISANRKEIGFPERRICRTTVQGRYLLSDDNGYVCDALSLDP 66

Query: 63  LSHCCLGKGDKFSCHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTYA 122
            S CC  +GDKFSCHGCN++SQCCNSYE+CVSCCL+P++ + EQ+LK+KI+KPATAG Y 
Sbjct: 67  ESRCCPERGDKFSCHGCNILSQCCNSYEFCVSCCLHPAQIQKEQVLKLKIAKPATAGAYL 126

Query: 123 SVFDFCAGRCRHNSESVVHENAYHGDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRQG 182
           SVFDFCAGRCRH+SESVVHENAY  D+HHCFSLPS S+G S T +E RL+GINVI+GRQG
Sbjct: 127 SVFDFCAGRCRHSSESVVHENAYVSDFHHCFSLPSNSTGSSVTPVEARLHGINVIIGRQG 186

Query: 183 ESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELNP 242
           ESCDSVC+SNGQSCV NK+LVLN CDIIQKYMSCKG C+ SVG D PAEV Y+AP+ LNP
Sbjct: 187 ESCDSVCRSNGQSCVLNKLLVLNQCDIIQKYMSCKGACLASVGADQPAEVVYDAPKHLNP 246

Query: 243 GACLYSSAQSILTCDGSHPHTMRLCPCA 270
           GACLY+  QS+L+CDGSH HT RLCPCA
Sbjct: 247 GACLYTRTQSMLSCDGSHLHTKRLCPCA 274

[Close]

BLAST of CmaCh06G016490 vs. NCBI nr
Match: gi|802554903|ref|XP_012065151.1| (PREDICTED: uncharacterized protein LOC105628373 [Jatropha curcas])

HSP 1 Score: 407.9 bits (1047), Expect = 1.4e-110
Identity = 182/255 (71.37%), Postives = 217/255 (85.10%), Query Frame = 1


Query: 15  LFFPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSIDPLSHCCLGKGDKFS 74
           LF P  ISAIR  IG    N CR+T+QGR+LL+DD G VCDALS+DPLS CC  KG+KFS
Sbjct: 16  LFLPG-ISAIRKDIGFQELNLCRNTVQGRFLLSDDKGHVCDALSLDPLSRCCPEKGEKFS 75

Query: 75  CHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTYASVFDFCAGRCRHN 134
           CHGCNL+SQCCNSYE+CVSCCLNP++T+ ++++K+K++KP+TAGTYAS+FDFCAGRCRHN
Sbjct: 76  CHGCNLLSQCCNSYEFCVSCCLNPARTREKEVMKLKVAKPSTAGTYASIFDFCAGRCRHN 135

Query: 135 SESVVHENAYHGDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRQGESCDSVCKSNGQS 194
           SESVVHENAY  D+HHCFSLPS SSG + TQLE RL GINV++GRQG+SCDS CKSNGQS
Sbjct: 136 SESVVHENAYLSDFHHCFSLPSNSSGANHTQLEARLVGINVVIGRQGKSCDSACKSNGQS 195

Query: 195 CVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELNPGACLYSSAQSILT 254
           CV NK+LVLN CDI+QKY+SCKG C+ S+G D PAEV  +AP+  NPGACLY+  QS+L+
Sbjct: 196 CVLNKLLVLNQCDIMQKYLSCKGACLASIGADQPAEVVDDAPKHSNPGACLYTRTQSMLS 255

Query: 255 CDGSHPHTMRLCPCA 270
           CDGSH HT RLCPCA
Sbjct: 256 CDGSHHHTRRLCPCA 269

[Close]

BLAST of CmaCh06G016490 vs. NCBI nr
Match: gi|823246387|ref|XP_012455865.1| (PREDICTED: uncharacterized protein LOC105777257 [Gossypium raimondii])

HSP 1 Score: 407.1 bits (1045), Expect = 2.3e-110
Identity = 189/266 (71.05%), Postives = 221/266 (83.08%), Query Frame = 1


Query: 5   SLSIVFFQFFLF-FPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSIDPLS 64
           SLS VF    LF   S I+A R  IG   +  CR+T+QGRYLL+DDNG VCDALS+DP  
Sbjct: 9   SLSWVFVIQLLFQSSSTIAATRKEIGFPERRICRTTVQGRYLLSDDNGYVCDALSLDPQY 68

Query: 65  HCCLGKGDKFSCHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTYASV 124
            CC  +GDKFSC GCN++SQCCNSYE+CVSCCL+P++T+ EQ+LK+KI+KP+T+GTY SV
Sbjct: 69  RCCPERGDKFSCRGCNVLSQCCNSYEFCVSCCLHPARTQKEQVLKLKIAKPSTSGTYLSV 128

Query: 125 FDFCAGRCRHNSESVVHENAYHGDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRQGES 184
           FDFCAGRCRHNSESVVHENAY  D+HHCFSLPS SSG S + +E RLNGINV++GRQGES
Sbjct: 129 FDFCAGRCRHNSESVVHENAYVNDFHHCFSLPSNSSGSSISPVEARLNGINVVIGRQGES 188

Query: 185 CDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELNPGA 244
           CDSVCKSNGQSCV NK+L+LN CDIIQKYMSCKG C+ SVGPD PAEV  +AP+ LNPGA
Sbjct: 189 CDSVCKSNGQSCVLNKLLILNQCDIIQKYMSCKGACLASVGPDQPAEVVDDAPKNLNPGA 248

Query: 245 CLYSSAQSILTCDGSHPHTMRLCPCA 270
           CLY+  QS+L+CDGSH HT RLCPCA
Sbjct: 249 CLYTRTQSMLSCDGSHRHTRRLCPCA 274

The following BLAST results are available for this feature:

BLAST of CmaCh06G016490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CL049_MOUSE	7.4e-16	39.50	UPF0454 protein C12orf49 homolog OS=Mus musculus PE=2 SV=1	[more]
CL049_BOVIN	1.3e-15	39.50	UPF0454 protein C12orf49 homolog OS=Bos taurus PE=2 SV=1	[more]
CL049_CHICK	3.7e-15	37.10	UPF0454 protein C12orf49 homolog OS=Gallus gallus GN=RCJMB04_18o22 PE=2 SV=1	[more]
CL049_HUMAN	8.2e-15	37.82	UPF0454 protein C12orf49 OS=Homo sapiens GN=C12orf49 PE=1 SV=1	[more]
CL049_XENLA	2.4e-14	36.15	UPF0454 protein C12orf49 homolog OS=Xenopus laevis PE=2 SV=1	[more]

BLAST of CmaCh06G016490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW54_CUCSA	8.8e-133	81.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015790 PE=4 SV=1	[more]
A0A061EKH0_THECC	2.5e-111	71.64	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_020048 PE=4 SV=1	[more]
A0A067LGY9_JATCU	9.5e-111	71.37	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20840 PE=4 SV=1	[more]
A0A0D2UT25_GOSRA	1.6e-110	71.05	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G143000 PE=4 SV=1	[more]
W9RBY3_9ROSA	6.2e-110	70.23	Uncharacterized protein OS=Morus notabilis GN=L484_001149 PE=4 SV=1	[more]

BLAST of CmaCh06G016490 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G59390.2	2.8e-106	62.27	unknown protein	[more]

BLAST of CmaCh06G016490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659108032\|ref\|XP_008453981.1\|	1.1e-133	82.16	PREDICTED: uncharacterized protein LOC103494541 [Cucumis melo]	[more]
gi\|778690047\|ref\|XP_011653057.1\|	1.3e-132	81.78	PREDICTED: uncharacterized protein LOC101217783 [Cucumis sativus]	[more]
gi\|590655363\|ref\|XP_007033966.1\|	3.6e-111	71.64	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|802554903\|ref\|XP_012065151.1\|	1.4e-110	71.37	PREDICTED: uncharacterized protein LOC105628373 [Jatropha curcas]	[more]
gi\|823246387\|ref\|XP_012455865.1\|	2.3e-110	71.05	PREDICTED: uncharacterized protein LOC105777257 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019352	UPF0454

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G016490.1	CmaCh06G016490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019352	Uncharacterised protein family UPF0454	PANTHER	PTHR13481	UNCHARACTERIZED	coord: 8..269 score: 5.8E
IPR019352	Uncharacterised protein family UPF0454	PFAM	PF10218	DUF2054	coord: 33..152 score: 1.2
None	No IPR available	PANTHER	PTHR13481:SF0	UPF0454 PROTEIN C12ORF49	coord: 8..269 score: 5.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh06G016490	Cla010845	Watermelon (97103) v1	cmawmB794
CmaCh06G016490	MELO3C017715	Melon (DHL92) v3.5.1	cmameB774
CmaCh06G016490	ClCG07G015660	Watermelon (Charleston Gray)	cmawcgB747
CmaCh06G016490	CSPI04G03450	Wild cucumber (PI 183967)	cmacpiB849
CmaCh06G016490	CmoCh14G015110	Cucurbita moschata (Rifu)	cmacmoB797
CmaCh06G016490	CmoCh06G016510	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G016490	Lsi07G000460	Bottle gourd (USVL1VR-Ls)	cmalsiB777
CmaCh06G016490	Cp4.1LG08g05970	Cucurbita pepo (Zucchini)	cmacpeB853
CmaCh06G016490	Cp4.1LG03g12800	Cucurbita pepo (Zucchini)	cmacpeB837
CmaCh06G016490	MELO3C017715.2	Melon (DHL92) v3.6.1	cmamedB875
CmaCh06G016490	CsaV3_4G003450	Cucumber (Chinese Long) v3	cmacucB0986
CmaCh06G016490	Cla97C07G142680	Watermelon (97103) v2	cmawmbB867
CmaCh06G016490	Bhi01G002104	Wax gourd	cmawgoB1008
CmaCh06G016490	Carg22423	Silver-seed gourd	carcmaB0267
CmaCh06G016490	Carg15476	Silver-seed gourd	carcmaB0974

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh06G016490	CmaCh14G014740	Cucurbita maxima (Rimu)	cmacmaB284

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh06G016490	Wild cucumber (PI 183967)	cmacpiB850
CmaCh06G016490	Cucumber (Chinese Long) v2	cmacuB835
CmaCh06G016490	Cucumber (Gy14) v2	cgybcmaB560
CmaCh06G016490	Cucumber (Chinese Long) v3	cmacucB0987
CmaCh06G016490	Cucumber (Gy14) v1	cgycmaB0205