Carg15476 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15476
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	UPF0454 protein C12orf49 like
Location	Cucurbita_argyrosperma_scaffold_069 : 357505 .. 359983 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCGTTTCAGTTTATCGATCGTATTCTTCCAATTTTTCCTCTTCTTTCCTTCAAGAATTTCAGCGATCAGGTGAAAATTTCCACTGTCCGTTTTTAATTCCTTCCATTTCCATTCTGAGATTTTGGCGTTTCATACTGTTCTGCATCCATTACAATTAAAAAAAAACCCGAAGAAAGTTGCTGTTCAGATTCTTGAATCTTTGAATCCTGCTAAAATGTATTTCTCTTCAGTTTCGTTAGTTTTCTCAACGCTCCTGTGCCATTTTGTTCACTTTTTCTTGTTTTTTTATTGAAGGAATCATATAGGCTTAGCAGTAAAGAACACGTGTAGGAGCACTGTTCAGGGAAGATATTTACTGACCGATGATAATGGTAATATTTCTTTCATTATCTCGCAGTGCTACTTCAGTTCTTCATTCTTTTTTTACAGTTACCTTGAATATCCCTGAACAATATCCTGTGATTGAAGACATGCTTTTGTTAGAAATTGCTAGTAACCCACAGAACCTGATGGATATAGCTTCCATTGCAGGTCGTGTATGTGATGCTTTATCTATTGATCCACTATCTCATTGCTGCCTTGGCAAAGGGGACAAATTTCCTTGTCAGTGAGTTTTTTTTTTTTTTCTTTTTTTCTTTTTTTCTTTTTTTCCAAATAAATCTCCCTCCAATGGCCCATGAGGAGTGTAAGAGCTCTGTCAAGCTACCTTATTGTTTGTTTTTTCTTTTTACACGTTGCAGTGGGTGCAATCTTGTTTCACAATGTTGCAATTCGTATGAATATTGTGTTTCATGCTGCCTGAATCCTTCAAAGGTATGATGGGTTTCTAATTCTTCTTATGCTTCATTTTTGCTATGGAATCTAAAATCTGGTGCATTTCTGGATGATGATGGTTGCAGACAAAAGGAGAACAAATACTAAAAATCAAAATTTCCAAGCCAGCCACGGCAGGTGATCACTAACGCTCTATATATGAATGGAACAGTTCAAGCCCACCGCTAGTAGATCTTGTCTTCTTTGAGCTTTTTCTTAAAGGTTTTAAAATACGTTTGCTAGGGAGAGGTTTCCACACACTTATAAATAATGTTTTGTTCTCCTCCCCAACCGATGTGAGATCTCATAATCCACCCCCTTCAAGGCCCAATGTCCTCGTTGACACTCATTTCTTTCTCCAATCGATGCGGGACCTCAATCCACCTCCCTTTGAGACCCAACGTCCTTGCTGGCACACTGCCTCGTGTCTAATCCCCTTCGAAGATCAGCCTCCTCTCTGGTACATCGCCCGATGTCTGGCTCTGATACCATTTGTAATGGCCCAAACCCACTACTAGCACATATTATATCCTCTTTGGATTTTCTCAGGCTTCCCTTCAAGGTTATTAAAACACATTTGTTAGGGATAAATTTTTAGACTCTTATAAAAAATGCTTCGTTCTCCGCCCTAACTACCGTGGGATCTGACCGTTAATGTTTTGGAACAGTATTTTACGATTAATATTCATGTGAAGCTTACTTTTCATTTAAGGAATCATTCCCCCTTGGAGTGGATTTGAGATCATAATTTAGTCTGAGATTAAATATATGAAACTGTGGTAAATGATGCAGGGACATATGCCAGTGTCTTTGATTTCTGTGCTGGGAGGTGTCGTCATAATTCTGAGAGTGTTGTAAGTGTCCTGCATTGTGTTATTGCATTTTATCTTTCTTTAGAGAGTTGAAATATTTGATTGAATTTCAAATTCTCAGGTGCATGAAAATGCTTATCACAGTGATTACCATCATTGCTTTTCCCTGCCATCATATTCTTCAGGTTAGCTACTGAGTTCTGAATTCAAACCAAGTAGTCATTATAGTTTCTTTAAGCATTCTGTGATGTTTATGATTCATTTCCAAAGTTTGGACTTCGTAGGAGTGAGCAGCACACAACTAGAATTCAGACTGAATGGCATCAATGTCATTGTTGGAAGGTCAGGGTAGCTAGGATTGTTTATTATATACGCTGTTTGATCTCTATCTCACTCTTCTGAACTGAATCTACGATAGACAAGGAGAATCATGTGATTCAGTTTGCAAGTCAAATGGACAATCATGCGTCTCAAACAAGATTTTGGTCCTAAATCATTGTGACATGTGAGTAATCTGCTGTTTTCTTTTCCTTCGTTTCTTATGGAGCCATTAAAACATGTTTTTTCTAATTTGGGTATGATAGAATACAAAAATACATGAGCTGCAAAGGAGGTTGCATAGAAAGTGTTGGGCCTGATCACCCTGCTGAAGTTGCTTATAATGCTCCTGAAGAACTGGTACGGTGTCCTGTTCTTTATGTATAGCACATTACATACGAGTTTTATAGCACATTTTGTTTATCCTATGAACTTCAGAATCCAGGAGCATGCTTATATAGTAGCGCACAGTCAATACTTACTTGTGATGGCTCACACCCACATACCATGAGACTTTGCCCTTGTGCGTAG

mRNA sequence

ATGCATCGTTTCAGTTTATCGATCGTATTCTTCCAATTTTTCCTCTTCTTTCCTTCAAGAATTTCAGCGATCAGGAATCATATAGGCTTAGCAGTAAAGAACACGTGTAGGAGCACTGTTCAGGGAAGATATTTACTGACCGATGATAATGGTCGTGTATGTGATGCTTTATCTATTGATCCACTATCTCATTGCTGCCTTGGCAAAGGGGACAAATTTCCTTTGGGTGCAATCTTGTTTCACAATGTTGCAATTCGGACATATGCCAGTGTCTTTGATTTCTGTGCTGGGAGGTGTCGTCATAATTCTGAGAGTGTTGTGCATGAAAATGCTTATCACAGTGATTACCATCATTGCTTTTCCCTGCCATCATATTCTTCAGGAGTGAGCAGCACACAACTAGAATTCAGACTGAATGGCATCAATGTCATTGTTGGAAGGTCAGGACAAGGAGAATCATGTGATTCAGTTTGCAAGTCAAATGGACAATCATGCGTCTCAAACAAGATTTTGGTCCTAAATCATTGTGACATAATACAAAAATACATGAGCTGCAAAGGAGGTTGCATAGAAAGTGTTGGGCCTGATCACCCTGCTGAAGTTGCTTATAATGCTCCTGAAGAACTGAATCCAGGAGCATGCTTATATAGTAGCGCACAGTCAATACTTACTTGTGATGGCTCACACCCACATACCATGAGACTTTGCCCTTGTGCGTAG

Coding sequence (CDS)

ATGCATCGTTTCAGTTTATCGATCGTATTCTTCCAATTTTTCCTCTTCTTTCCTTCAAGAATTTCAGCGATCAGGAATCATATAGGCTTAGCAGTAAAGAACACGTGTAGGAGCACTGTTCAGGGAAGATATTTACTGACCGATGATAATGGTCGTGTATGTGATGCTTTATCTATTGATCCACTATCTCATTGCTGCCTTGGCAAAGGGGACAAATTTCCTTTGGGTGCAATCTTGTTTCACAATGTTGCAATTCGGACATATGCCAGTGTCTTTGATTTCTGTGCTGGGAGGTGTCGTCATAATTCTGAGAGTGTTGTGCATGAAAATGCTTATCACAGTGATTACCATCATTGCTTTTCCCTGCCATCATATTCTTCAGGAGTGAGCAGCACACAACTAGAATTCAGACTGAATGGCATCAATGTCATTGTTGGAAGGTCAGGACAAGGAGAATCATGTGATTCAGTTTGCAAGTCAAATGGACAATCATGCGTCTCAAACAAGATTTTGGTCCTAAATCATTGTGACATAATACAAAAATACATGAGCTGCAAAGGAGGTTGCATAGAAAGTGTTGGGCCTGATCACCCTGCTGAAGTTGCTTATAATGCTCCTGAAGAACTGAATCCAGGAGCATGCTTATATAGTAGCGCACAGTCAATACTTACTTGTGATGGCTCACACCCACATACCATGAGACTTTGCCCTTGTGCGTAG

Protein sequence

MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTVQGRYLLTDDNGRVCDALSIDPLSHCCLGKGDKFPLGAILFHNVAIRTYASVFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRSGQGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELNPGACLYSSAQSILTCDGSHPHTMRLCPCA

Homology

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BLAST of Carg15476 vs. NCBI nr
Match: XP_023539880.1 (uncharacterized protein LOC111800426 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 453.0 bits (1164), Expect = 6.4e-124
Identity = 225/271 (83.03%), Postives = 227/271 (83.76%), Query Frame = 0


Query: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTVQGRYLLTDDNGRVCDALSID 60
           MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRST+QGRYLLTDDNGRVCDALSID
Sbjct: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSID 60

Query: 61  PLSHCCLGKGDKFP--------------------------------LGAILFHNVAIRTY 120
           PLSHCCLGKGDKFP                                L   +       TY
Sbjct: 61  PLSHCCLGKGDKFPCHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTY 120

Query: 121 ASVFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRS 180
           ASVFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGR 
Sbjct: 121 ASVFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGR- 180

Query: 181 GQGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEE 240
            QGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEE
Sbjct: 181 -QGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEE 240

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BLAST of Carg15476 vs. NCBI nr
Match: XP_022972111.1 (uncharacterized protein LOC111470743 [Cucurbita maxima])

HSP 1 Score: 448.4 bits (1152), Expect = 1.6e-122
Identity = 223/271 (82.29%), Postives = 225/271 (83.03%), Query Frame = 0


Query: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTVQGRYLLTDDNGRVCDALSID 60
           MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRST+QGRYLLTDDNGRVCDALSID
Sbjct: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSID 60

Query: 61  PLSHCCLGKGDKFP--------------------------------LGAILFHNVAIRTY 120
           PLSHCCLGKGDKF                                 L   +       TY
Sbjct: 61  PLSHCCLGKGDKFSCHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTY 120

Query: 121 ASVFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRS 180
           ASVFDFCAGRCRHNSESVVHENAYH DYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGR 
Sbjct: 121 ASVFDFCAGRCRHNSESVVHENAYHGDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGR- 180

Query: 181 GQGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEE 240
            QGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEE
Sbjct: 181 -QGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEE 240

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BLAST of Carg15476 vs. NCBI nr
Match: XP_022932718.1 (uncharacterized protein LOC111439182 [Cucurbita moschata])

HSP 1 Score: 448.0 bits (1151), Expect = 2.1e-122
Identity = 223/271 (82.29%), Postives = 226/271 (83.39%), Query Frame = 0


Query: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTVQGRYLLTDDNGRVCDALSID 60
           MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRST+QGRYLLTDDNGRVCDALSID
Sbjct: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTIQGRYLLTDDNGRVCDALSID 60

Query: 61  PLSHCCLGKGDKFP--------------------------------LGAILFHNVAIRTY 120
           PLSHCCLGKGDKFP                                L   +       TY
Sbjct: 61  PLSHCCLGKGDKFPCHGCNLVSQCCNSYEYCVSCCLNPSKTKGEQILKIKISKPATAGTY 120

Query: 121 ASVFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRS 180
           ASVFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGR 
Sbjct: 121 ASVFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGR- 180

Query: 181 GQGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEE 240
            QGESCDSVCKSN QSCVSNKILVLNHCDIIQK+MSCKGGCIESVGPDHPAEVAYNAPEE
Sbjct: 181 -QGESCDSVCKSNEQSCVSNKILVLNHCDIIQKHMSCKGGCIESVGPDHPAEVAYNAPEE 240

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BLAST of Carg15476 vs. NCBI nr
Match: XP_016901531.1 (PREDICTED: uncharacterized protein LOC103494541 isoform X2 [Cucumis melo])

HSP 1 Score: 384.0 bits (985), Expect = 3.6e-103
Identity = 185/269 (68.77%), Postives = 210/269 (78.07%), Query Frame = 0


Query: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTVQGRYLLTDDNGRVCDALSID 60
           +HRF L+ +FFQFF  FPS ISAIR +IGLAV ++CRSTVQGRYLL+DDNG VCDALS+D
Sbjct: 3   IHRFDLTFLFFQFFFLFPSTISAIRTNIGLAVNSSCRSTVQGRYLLSDDNGYVCDALSVD 62

Query: 61  PLSHCCLGKGDKFPLGAILFHNVAIR------------------------------TYAS 120
           PLS CC GKG+KFP   +  +   +                               TYAS
Sbjct: 63  PLSRCCHGKGEKFPCHFLFPYEFELESKNWRLSGCCMQTKREQILKIKIAKPATAGTYAS 122

Query: 121 VFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRSGQ 180
           +FDFC GRCRHNSESVVHENAYHS +HHCFSLPSYSSG +STQLEFRL+GINVI+GR  Q
Sbjct: 123 IFDFCVGRCRHNSESVVHENAYHSAFHHCFSLPSYSSGDNSTQLEFRLSGINVIIGR--Q 182

Query: 181 GESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELN 240
           GESCDSVCKSNGQSCV NKILVLNHCDI+QKY+SCKGGC+ SVG D PAEVAY+AP+ELN
Sbjct: 183 GESCDSVCKSNGQSCVPNKILVLNHCDIMQKYLSCKGGCLASVGTDQPAEVAYDAPKELN 242

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BLAST of Carg15476 vs. NCBI nr
Match: XP_008453981.1 (PREDICTED: uncharacterized protein LOC103494541 isoform X1 [Cucumis melo])

HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102
Identity = 186/271 (68.63%), Postives = 209/271 (77.12%), Query Frame = 0


Query: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTVQGRYLLTDDNGRVCDALSID 60
           +HRF L+ +FFQFF  FPS ISAIR +IGLAV ++CRSTVQGRYLL+DDNG VCDALS+D
Sbjct: 3   IHRFDLTFLFFQFFFLFPSTISAIRTNIGLAVNSSCRSTVQGRYLLSDDNGYVCDALSVD 62

Query: 61  PLSHCCLGKGDKFP--------------------------------LGAILFHNVAIRTY 120
           PLS CC GKG+KFP                                L   +       TY
Sbjct: 63  PLSRCCHGKGEKFPCHGCNLVLQCCNSYEYCVSCCQNPSRTKREQILKIKIAKPATAGTY 122

Query: 121 ASVFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRS 180
           AS+FDFC GRCRHNSESVVHENAYHS +HHCFSLPSYSSG +STQLEFRL+GINVI+GR 
Sbjct: 123 ASIFDFCVGRCRHNSESVVHENAYHSAFHHCFSLPSYSSGDNSTQLEFRLSGINVIIGR- 182

Query: 181 GQGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEE 240
            QGESCDSVCKSNGQSCV NKILVLNHCDI+QKY+SCKGGC+ SVG D PAEVAY+AP+E
Sbjct: 183 -QGESCDSVCKSNGQSCVPNKILVLNHCDIMQKYLSCKGGCLASVGTDQPAEVAYDAPKE 242

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BLAST of Carg15476 vs. TAIR10
Match: AT3G59390.2 (unknown protein)

HSP 1 Score: 285.4 bits (729), Expect = 3.2e-77
Identity = 143/275 (52.00%), Postives = 181/275 (65.82%), Query Frame = 0


Query: 1   MHRFSLSIVFFQFFL----FFPSRISAIRNHIGLAVKNTCRSTVQGRYLLTDDNGRVCDA 60
           M +   S++F    L     FP R+SAIR  IG   + +CR+TVQGRYL++DD G VCDA
Sbjct: 1   MSKSGFSLLFLVLLLIMGFLFPLRVSAIRKDIGFLEERSCRTTVQGRYLISDDEGNVCDA 60

Query: 61  LSIDPLSHCCLGKGDKF------------------------PLGAILFHNVAIR------ 120
           LS++  + CC  KG++F                        P   +L   V ++      
Sbjct: 61  LSLESRTRCCPWKGERFSCHGCNILSQCCNSYEFCVSCCLNPSQTLLEKVVKVKVAKPAT 120

Query: 121 --TYASVFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVI 180
             TY SVFDFCAGRCRHNSESVVHENAYHS++HHCFSL S +SG + TQ+E RL GI+VI
Sbjct: 121 SGTYKSVFDFCAGRCRHNSESVVHENAYHSEFHHCFSLTSNASGANLTQVETRLLGIDVI 180

Query: 181 VGRSGQGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYN 240
           VG   QG+SCD+VCKS GQ CV NK+ +LN CD++++YM+CKG C+ S G D PAEV  +
Sbjct: 181 VG--SQGDSCDAVCKSRGQLCVMNKLSLLNQCDVMKRYMNCKGSCLASAGADQPAEVVED 240

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BLAST of Carg15476 vs. Swiss-Prot
Match: sp|Q6GNT2|CL049_XENLA (UPF0454 protein C12orf49 homolog OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.9e-05
Identity = 34/126 (26.98%), Postives = 53/126 (42.06%), Query Frame = 0


Query: 32  VKNTCRSTVQGRYLLTDDNGRVCD--------ALSIDPLS-------------------- 91
           + N CR++VQG+ L+TDD G +C+          +I+  S                    
Sbjct: 71  ISNQCRNSVQGKLLVTDDMGYICERKELLANGCCNINVASTKLYSCETCLPNGCCSVYEF 130

Query: 92  --HCCLGKGDKFPL------GAILFHNVAIRTYASVFDFCAGRCRHNSESVVHENAYHSD 121
              CCL    +  L       A+ F N+  +     F+ C  +CR +S+SV HEN Y + 
Sbjct: 131 CVSCCLQPNKQLQLERFLNKAAVAFQNL-FQAVEDHFELCLAKCRTSSQSVQHENTYRNP 190

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BLAST of Carg15476 vs. Swiss-Prot
Match: sp|Q8BTG6|CL049_MOUSE (UPF0454 protein C12orf49 homolog OS=Mus musculus OX=10090 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.5e-04
Identity = 31/115 (26.96%), Postives = 46/115 (40.00%), Query Frame = 0


Query: 34  NTCRSTVQGRYLLTDDNGRVCDALSI------------------------------DPLS 93
           N CR++VQG++LLTD+ G VC+   +                              +   
Sbjct: 73  NQCRNSVQGKHLLTDELGYVCERKDLLANGCCDVSVPSTKQYCCDGCXXXXXXXAYEYCV 132

Query: 94  HCCLGKGDKFPL------GAILFHNVAIRTYASVFDFCAGRCRHNSESVVHENAY 113
            CCL    +  L       A+ F N+        F+ C  +CR +S+SV HEN Y
Sbjct: 133 SCCLQPSKQLLLERFLNRAAVAFQNL-FMAVEDHFELCLAKCRTSSQSVQHENTY 186

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BLAST of Carg15476 vs. TrEMBL
Match: tr|A0A1S4DZY1|A0A1S4DZY1_CUCME (uncharacterized protein LOC103494541 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494541 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 2.4e-103
Identity = 185/269 (68.77%), Postives = 210/269 (78.07%), Query Frame = 0


Query: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTVQGRYLLTDDNGRVCDALSID 60
           +HRF L+ +FFQFF  FPS ISAIR +IGLAV ++CRSTVQGRYLL+DDNG VCDALS+D
Sbjct: 3   IHRFDLTFLFFQFFFLFPSTISAIRTNIGLAVNSSCRSTVQGRYLLSDDNGYVCDALSVD 62

Query: 61  PLSHCCLGKGDKFPLGAILFHNVAIR------------------------------TYAS 120
           PLS CC GKG+KFP   +  +   +                               TYAS
Sbjct: 63  PLSRCCHGKGEKFPCHFLFPYEFELESKNWRLSGCCMQTKREQILKIKIAKPATAGTYAS 122

Query: 121 VFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRSGQ 180
           +FDFC GRCRHNSESVVHENAYHS +HHCFSLPSYSSG +STQLEFRL+GINVI+GR  Q
Sbjct: 123 IFDFCVGRCRHNSESVVHENAYHSAFHHCFSLPSYSSGDNSTQLEFRLSGINVIIGR--Q 182

Query: 181 GESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELN 240
           GESCDSVCKSNGQSCV NKILVLNHCDI+QKY+SCKGGC+ SVG D PAEVAY+AP+ELN
Sbjct: 183 GESCDSVCKSNGQSCVPNKILVLNHCDIMQKYLSCKGGCLASVGTDQPAEVAYDAPKELN 242

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BLAST of Carg15476 vs. TrEMBL
Match: tr|A0A1S3BX18|A0A1S3BX18_CUCME (uncharacterized protein LOC103494541 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494541 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 9.1e-103
Identity = 186/271 (68.63%), Postives = 209/271 (77.12%), Query Frame = 0


Query: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTVQGRYLLTDDNGRVCDALSID 60
           +HRF L+ +FFQFF  FPS ISAIR +IGLAV ++CRSTVQGRYLL+DDNG VCDALS+D
Sbjct: 3   IHRFDLTFLFFQFFFLFPSTISAIRTNIGLAVNSSCRSTVQGRYLLSDDNGYVCDALSVD 62

Query: 61  PLSHCCLGKGDKFP--------------------------------LGAILFHNVAIRTY 120
           PLS CC GKG+KFP                                L   +       TY
Sbjct: 63  PLSRCCHGKGEKFPCHGCNLVLQCCNSYEYCVSCCQNPSRTKREQILKIKIAKPATAGTY 122

Query: 121 ASVFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRS 180
           AS+FDFC GRCRHNSESVVHENAYHS +HHCFSLPSYSSG +STQLEFRL+GINVI+GR 
Sbjct: 123 ASIFDFCVGRCRHNSESVVHENAYHSAFHHCFSLPSYSSGDNSTQLEFRLSGINVIIGR- 182

Query: 181 GQGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEE 240
            QGESCDSVCKSNGQSCV NKILVLNHCDI+QKY+SCKGGC+ SVG D PAEVAY+AP+E
Sbjct: 183 -QGESCDSVCKSNGQSCVPNKILVLNHCDIMQKYLSCKGGCLASVGTDQPAEVAYDAPKE 242

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BLAST of Carg15476 vs. TrEMBL
Match: tr|A0A0A0KW54|A0A0A0KW54_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015790 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.0e-101
Identity = 185/271 (68.27%), Postives = 208/271 (76.75%), Query Frame = 0


Query: 1   MHRFSLSIVFFQFFLFFPSRISAIRNHIGLAVKNTCRSTVQGRYLLTDDNGRVCDALSID 60
           +HRF L+ +FFQF   FPS IS+IR +IGLAV ++CRSTVQGRYLL+DDNG VCDALS+D
Sbjct: 3   IHRFHLTFLFFQFLFLFPSTISSIRTNIGLAVNSSCRSTVQGRYLLSDDNGYVCDALSVD 62

Query: 61  PLSHCCLGKGDKFP--------------------------------LGAILFHNVAIRTY 120
           PLS CC GKG+KFP                                L   +       TY
Sbjct: 63  PLSRCCHGKGEKFPCHGCNLVLQCCNSYEYCVSCCQNPSRTKREQILKIKIAKPATAGTY 122

Query: 121 ASVFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRS 180
           ASVFDFC GRCRHNSESVVHENAYHS +HHCFSLPSYSSG +STQLEFRL+GINVI+GR 
Sbjct: 123 ASVFDFCVGRCRHNSESVVHENAYHSAFHHCFSLPSYSSGDNSTQLEFRLSGINVIIGR- 182

Query: 181 GQGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEE 240
            QGESCDSVCKSNGQSCV NKILVLNHCDI+QKY+SCKGGC+ SVG D PAEVAY+AP+E
Sbjct: 183 -QGESCDSVCKSNGQSCVPNKILVLNHCDIMQKYLSCKGGCLASVGTDQPAEVAYDAPKE 242

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BLAST of Carg15476 vs. TrEMBL
Match: tr|A0A2I4ETA7|A0A2I4ETA7_9ROSI (uncharacterized protein LOC108992488 OS=Juglans regia OX=51240 GN=LOC108992488 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.8e-83
Identity = 161/264 (60.98%), Postives = 183/264 (69.32%), Query Frame = 0


Query: 9   VFFQFFLF-FPSRISAIRNHIGLAVKNTCRSTVQGRYLLTDDNGRVCDALSIDPLSHCCL 68
           +F   F+F F  RISAIR  IG   K  CR+TVQGRYLL+DDNGRVCDALS+DP S CC 
Sbjct: 13  IFLHLFIFQFSPRISAIRKDIGFLEKPICRNTVQGRYLLSDDNGRVCDALSMDPESGCCP 72

Query: 69  GKGDKFP--------------------------------LGAILFHNVAIRTYASVFDFC 128
           GK +KF                                 L   +       TYA VFDFC
Sbjct: 73  GKAEKFSCHGCNLLSQCCNSYEFCVSCCLNPSRTQKEQVLKVKIAKQATAGTYAGVFDFC 132

Query: 129 AGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRSGQGESCD 188
           AGRCRHNSESVVHENAY SD+HHCFSLPS SSG  +TQLE RLNGINVIVGR  Q ESCD
Sbjct: 133 AGRCRHNSESVVHENAYLSDFHHCFSLPSNSSGAGNTQLEGRLNGINVIVGR--QSESCD 192

Query: 189 SVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEELNPGACL 240
           SVCKSNGQSCV NK+LVLN C+I+QKYM+CKG C+ S+G D PAEV  +AP+ LNPGACL
Sbjct: 193 SVCKSNGQSCVPNKLLVLNQCEIMQKYMTCKGACLASMGADQPAEVVDDAPKNLNPGACL 252

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BLAST of Carg15476 vs. TrEMBL
Match: tr|A0A1R3GHT3|A0A1R3GHT3_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_25731 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.2e-81
Identity = 163/270 (60.37%), Postives = 184/270 (68.15%), Query Frame = 0


Query: 3   RFSLSIVFFQFFLFFPS-RISAIRNHIGLAVKNTCRSTVQGRYLLTDDNGRVCDALSIDP 62
           + SL  +F   FLF  S  I+  R  IG   + TCR+TVQGRYLL+DDNG VC+ALS+DP
Sbjct: 7   KLSLFWIFLSHFLFQLSWTIATPRKEIGFPERRTCRTTVQGRYLLSDDNGYVCEALSLDP 66

Query: 63  LSHCCLGKGDKFPLGA----------------------------ILFHNVA----IRTYA 122
            SHCC  +GDKF                                +L   VA      TY 
Sbjct: 67  QSHCCPERGDKFSCHGCNVLSQCCNSYEFCVSCCLHPAQTQKEQVLKLKVAKPATAGTYV 126

Query: 123 SVFDFCAGRCRHNSESVVHENAYHSDYHHCFSLPSYSSGVSSTQLEFRLNGINVIVGRSG 182
           SVFD+CAGRCRHNSESVVHENAY SD+HHCFSLPS SSG + T +E RLNGINVI+GR  
Sbjct: 127 SVFDYCAGRCRHNSESVVHENAYVSDFHHCFSLPSNSSGSTVTPVEARLNGINVIIGR-- 186

Query: 183 QGESCDSVCKSNGQSCVSNKILVLNHCDIIQKYMSCKGGCIESVGPDHPAEVAYNAPEEL 240
           QGESCD VCKSNGQSCV NK+LVLN CDIIQKYMSCKG C+ SVG D PAEV  +AP+ L
Sbjct: 187 QGESCDQVCKSNGQSCVLNKLLVLNQCDIIQKYMSCKGACLASVGADQPAEVVDDAPKHL 246

The following BLAST results are available for this feature:

BLAST of Carg15476 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539880.1	6.4e-124	83.03	uncharacterized protein LOC111800426 [Cucurbita pepo subsp. pepo]	[more]
XP_022972111.1	1.6e-122	82.29	uncharacterized protein LOC111470743 [Cucurbita maxima]	[more]
XP_022932718.1	2.1e-122	82.29	uncharacterized protein LOC111439182 [Cucurbita moschata]	[more]
XP_016901531.1	3.6e-103	68.77	PREDICTED: uncharacterized protein LOC103494541 isoform X2 [Cucumis melo]	[more]
XP_008453981.1	1.4e-102	68.63	PREDICTED: uncharacterized protein LOC103494541 isoform X1 [Cucumis melo]	[more]

BLAST of Carg15476 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G59390.2	3.2e-77	52.00	unknown protein	[more]

BLAST of Carg15476 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6GNT2\|CL049_XENLA	6.9e-05	26.98	UPF0454 protein C12orf49 homolog OS=Xenopus laevis OX=8355 PE=2 SV=1	[more]
sp\|Q8BTG6\|CL049_MOUSE	4.5e-04	26.96	UPF0454 protein C12orf49 homolog OS=Mus musculus OX=10090 PE=2 SV=1	[more]

BLAST of Carg15476 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DZY1\|A0A1S4DZY1_CUCME	2.4e-103	68.77	uncharacterized protein LOC103494541 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BX18\|A0A1S3BX18_CUCME	9.1e-103	68.63	uncharacterized protein LOC103494541 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KW54\|A0A0A0KW54_CUCSA	1.0e-101	68.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015790 PE=4 SV=1	[more]
tr\|A0A2I4ETA7\|A0A2I4ETA7_9ROSI	2.8e-83	60.98	uncharacterized protein LOC108992488 OS=Juglans regia OX=51240 GN=LOC108992488 P...	[more]
tr\|A0A1R3GHT3\|A0A1R3GHT3_COCAP	1.2e-81	60.37	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_25731 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019352	UPF0454

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15476-RA	Carg15476-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019352	Uncharacterised protein family UPF0454	PFAM	PF10218	DUF2054	coord: 84..120 e-value: 1.1E-8 score: 35.1 coord: 33..67 e-value: 3.4E-6 score: 27.1
IPR019352	Uncharacterised protein family UPF0454	PANTHER	PTHR13481	UNCHARACTERIZED	coord: 89..238 coord: 31..69

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15476	Cla010845	Watermelon (97103) v1	carwmB0690
Carg15476	MELO3C017715	Melon (DHL92) v3.5.1	carmeB0694
Carg15476	ClCG07G015660	Watermelon (Charleston Gray)	carwcgB0670
Carg15476	Cucsa.094710	Cucumber (Gy14) v1	carcgyB0774
Carg15476	CmaCh06G016490	Cucurbita maxima (Rimu)	carcmaB0974
Carg15476	CmaCh14G014740	Cucurbita maxima (Rimu)	carcmaB0972
Carg15476	CmoCh06G016510	Cucurbita moschata (Rifu)	carcmoB0947
Carg15476	CmoCh14G015110	Cucurbita moschata (Rifu)	carcmoB0946
Carg15476	Lsi07G000470	Bottle gourd (USVL1VR-Ls)	carlsiB634
Carg15476	Cp4.1LG08g05970	Cucurbita pepo (Zucchini)	carcpeB0974
Carg15476	Cp4.1LG03g12800	Cucurbita pepo (Zucchini)	carcpeB0973
Carg15476	MELO3C017715.2	Melon (DHL92) v3.6.1	carmedB0707
Carg15476	Cla97C07G142680	Watermelon (97103) v2	carwmbB0722
Carg15476	Bhi01G002104	Wax gourd	carwgoB0816

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15476	Carg22423	Silver-seed gourd	carcarB231

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15476	Cucumber (Gy14) v2	carcgybB0693
Carg15476	Cucumber (Gy14) v1	carcgyB0775
Carg15476	Wild cucumber (PI 183967)	carcpiB0730
Carg15476	Cucumber (Chinese Long) v2	carcuB0716
Carg15476	Cucumber (Chinese Long) v3	carcucB0733