CmaCh06G009240 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G009240
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUbiquitin-associated/TS-N domain protein
LocationCma_Chr06 : 6127113 .. 6139028 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCGGCGGCCCCTCTGGTTTCAGTGCGTCCTCTTCAATTTCTCTCCTCTTCTGATGCTTAACCACCCACTTTCTCCCTTTTTCAATTTCTGTTCCACCTTGATTCATTTGCTCCTGTTCTTCTCTCTTTCGCAGACAATGCCCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCTTGGCTTGTCCTATCAGGTACTCTTCTCTCTCTTTCACTACCCAGATGCTTTTTCGCCAACTGTGGGTTGGTTTTATGTTCGAGACTAGGGTAGATTCGCTTCTTCGGTTAAGACGAGTCCTTTGCTTGGTTGAGTGTTTGACCTTCGATTCCGCGATGTATTGAGCATATACCCAGATTATAGATCCAACCGGCCGAGTTAATTGATGCATGATTGAAACTGGGGATCCTCTTTTCCTCCTGTATGTAATCACTTAGTTTAATCGACCATAGGGGCCTCTGCAATTCTGGTTTTGAATTGTATCTATCTTTAAGTAATTTTTTTTTTTTTTTTTTGTTGCTGGCTGGGGAAGGTGTAGCAGAAGTTGTCTCGTGGCTGGTTGTACGTTATGTGACTTGCCTATGAAATGTTTAGGTGTTCCTATCAGGAGATAATCCAAGTTCAGTAACATTTTTGGAGCCTGGTAGATATAAATTTTTGGTAGACTAAATAAGGATTAGTTCTAATTTGTGAAAAGAAGGTAGACTTTGGTACAGTCAGTTCCTAATTAAGTCATCTAATGAGATATTACATCATGTCCCTTCAATAAATCCCTAGAAAGAGGATCGTACTGACATGGGAAAAATAATTGTGAAGATTTTTGCATGAGCTTAGGAGATTTGGCACAATGTTATTGTCATCAAATTTGGATGAAAGAGGCAGGTTATTTTGAAGTAAAAGAACCTTAGTTGGTAACACCCATGGTCTTTCATCCTAAAGCTATGAACTAGTGTTGTGAAATTTTTGGAATTAAGATGGTGGGACGATATTTGGTTGGATGGGCAACTCTTGAATGACCCTTTTCCAATGTTATTCTCTGTTGCTATAAAAATTGGAGGTTGGATTAGGATTTTCAGGATTTGGAGACAAGAAACTGGAGATTGTACTCGGAGCTTAGAAGGAAGTAGCCGAATTTTCAAGGCTGATAGAGAGGTTAAATGTGGAACAATTAGGAATAAGAATAGCTCAAGACAATATAGCGTTAGTGCTATATGCTTCAAGGGAATTTTCAACAAGATCTATGCTATTTAAAATTTTAGTGGCAGAAACAATCTTGGCAGAGCATCTGATTAAAGGAAAAATAGCAAATATCCATATCCACATGTATCTATATATATACATATTCATTTATGGGTATGCCTTTTTAAGCTATATTAATATATATTTATTATTATTATTATTATTATCGGAGTAAGGGTCTCACTATTGCTATATGTTTTAAGCTTCTTCACTATATGATGGGCTTTTTATACTATAAAGAGTAATGCCAAACAATTACTCAGTGGTCAGGTACTTTAGAGAAAGGAGGCAGTGATTCCATTTTAGGAGAAATTTGGTTGGAGAGAAATTAAGGATTTGTATTAGACATAAGAAAAGGTGATGAGAAGGTTTTAACACTTGTTGTTGGTGCTCTTTGTTAAGCTCCCTTTTTCAGATACCTAAAGCCAAGTAGATGCATTAAAATGTGCCCGATCTCAAATATTCTCCCATGATTTGTCAATTTCTGACGAGATTCTTCTGTTCTTTTCAATCTAATATTTTACAAGATTGAAAAAACTAGCTTGCTAGAGTAAACAACTTCATCCCTAAACAAAGGACTCAAGATAGCTTCCTCTATCATTCCATGAAAACGTGAAATAAAAAACATAGACATGCTAGCAATCTTCCATAATCGAGACCAACATGGCAGCAAAAGGGCATAGCAACTATAATTATCTGTAGCCCCCTGCTCAAATGATAACAATTGGGGAAGGACAATACAAAATGGTGTGGCTAAAAAAGTAATAATTCTTTCTTAAGTGTCTGGAAAAGAACCATTTTTTTGTGAGATTGTAATCTTTTGAAGTTTTGAGAAGAAGTGAAGAGAAGAAAGGACTGGAGCATGGAGTAAAAAAAAACTAAATGATTGTTCTAATACTTGCAAGTTTATAACTACAAGGAGAAAGTCCATACATGACTATGTTTGTGTCTTACACTTTTATCCTTTTTTCTTCTTATATCATATTTTTGGGGCTAAGGAATGAGAAACACCTTTCCCTTGCATCATGATTTCAATTTCATTTCATTCGAAAAGATCCAAGTTTGTCTCAACAATGTTTTTGTCATTCCAATCGTGTTCCATTAATTAGGAACAACCAAGCTGATAAAATTTGATAACTCTCAGATGGAGAATTAGAATGAAAAATCCATTAGATGACAAATTTTGGTTCTAAGGCATCTCAGGCAGTGAATCAAATCCATGGTGCAAGGTTTTCTTATTAACATGCAATATTGATTTAGAAAAGTGAAGTGGAAATTGGAATTTATTTATATTTCTATAAACTAATATTTTTTTCATAATTTTTTTGTGTTGATAAGAAACAAGATATGATGTGTGGGAGGAAAGAAATATTTTCATGCACGATATGAAAATATTATGAAAGATGGGAGGAGAGCCAGGCACAAAACTTCCTGTTGCCCATGGGAACATTCAGGCTAGTGTAAAGGGTGGTACACCAATAAAGAGCCAAGAAAAGAGAACCAGATTTAAAAAACAATCAAAAGTCTCTTAGGCATCAGTATCATTGTTCCTTATTGGCCAATTCCTCCTATGAATAAAAGGACCTACCTTGAAAGAGTCTAGATATATGCAACCACAAAAGAAGAATTACAGCCAAAAAAGGCCAGAGAAAAGAGGGAGGAAGCTTCTATCTCCGTCAATATAAGTTTTTCAAAAGATTAGATTACGAACTATCTATGAGAGGCACTCCACTTCAAGCCCTATGCTGTATATTTCGACTCAATGTAATTTTTTTTGTAGCATCTTTATAAATCCCGTCGATTCTTTCCGACCCAAAATTTGAATACAAACCTTTAGAAATGGATACTGAAACAAGGAGCTTGCCTTTGTCCCTATATTGCTGTGGGTCTGTGAATGATTTCTACAATAGAAGTTTTAGATGAATGCTCTTTTATTACTTGGTGGTTACGGGTTTAATTTGAAAGGGAAAGAAGTTGGAACTAGTTTACTTGCTTGTAAAATTGGAAATGGGAGGTTCTTTGTACAGGAACCAGTATTTTATGAAATTCTTTATAAGATTCTAATATAATGAAGTCGCAGTGGTAGGAAGTTTTTGTTTAAAAGTTTGGACGGGACATGAATTTGAATAAGCTGCGCTAAAGGGATCCACTGGTAGAAATATTATTTTTATCATTTTAACTGCTGCTATTCCATCTTTGTTGCATATATAATCCTATTATATCGGACTTAAAGTCGACTTATTTTGTCCTTTTTCCATGATAGAGATTACCTTAATTTGTGTGGTAGAAAGGACACTTTTGACTAGTTAATTGTCATCTTTATGGCAGGATGTGATTGTGAAGCTTCGCTTTTGCAAGTTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTAAGTTTTATTCAATTCATACTGCAGGATTTTATTTAAACATGTCATAATGAAGCAACCAATCACGATCTTTAAATTGATGGCTCACATTAATACAATGCAGTGCCTGATGTATTAACTCTTGTAACCATGTATTTGTTTATCTTCAATGAATAGAAGCATAAAAAATCAGTAAGTGTATAAAAGTAGATGTAGTATAAGTTTTGTGGTCATACATGTCATGCCGTATTCATTTGGAATACTAAAAATGGTATTGAATTAATACTATGCCCCTTCTGATAACATACTAATCTTCCTAACATATCCATTACTAGTACTGACAACATTTTTGTGGTCATTGACATGACAAAGTGGGCACCTATATTTGAAATAGTATATTGTTTTTCATTTCTATTTGCTTCATAGAATAAGGTTAGCAGACTGAATTTAGTACGATCATTGCCTTTAGTTTCTATTCTAGAAAACAGATACGTTTGGGTCAGGAAGTGTGAGAGCATGCTAATATTGATGGTGATAATTTGTTAATTATAACTTTCTTCACTCCAATTGTCAAACATATTATGTTTCAGTTTTTGTGCTCAAAACTCTTTTTCCCCCCTTAGTTGATGTGTATTTCTTCGTAAAAAGATTTATGTTAATATTCTGTTGTTTTGCAGGTCTTTACCTTGTTCTCTATTATAATCTCCCTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGGTATGCATTTTGGTTTAATCTACTAATATGCTTGGGCAGCTAGTACACAAGCTCATGTTTGATTATTGGTTTGATGTTGTTTAACATCCCTTTCCTTTTTAAATTTTTAGAGGTGAACTCTCCTTCTTTGATTCTTTTTCTCCTGTAAAATTTGTTAACTTGGATTGGAAGTCCTTCCTGATCTTTCTGACATTTTCGCTTGTAAGCCTTTTTATACCCATCTAGTTTCTTCTCTCTCTACTTATCTCTTCAGAAACCTTTGAAAGTTGATAATCCGAATGAAATTCCATTTCTTTTTCCCTGATTGATGGCTTTAGGAAGAATTAACACCTTGGATTTTATCCAGAGAACCCATTACGTTGTCCTTGGCCCCAATTGGTGCTTTATGTGCAAGGGGCCTTGAGAAGATTTTTAACCGTTTGTTATGGCTTTGTTTGCTTGCTTCTCTGTTGTGGAGTCAGTTTTGGCATATTTTTGGTTCCTACCTGAACGTCTGTATGATGGTGGTGCGACATTTGATCCTCCATTTTGGGATAAAGACTGTTATTGCAAGCTTGCTTTTGTGTTGTTCTTTGAAGTATTTGGTTTGAAGGAAACAGGAGAGCCTTCATGGTTTTAGAACAGTTCCTTCCTAGACATCTTCTGACCACTCCTCTTAAGATATCTTAATTCTACGAGTCTTGAATCAAACAGCCACTTAAATTTGAGAGCTAGATGGAGATGGTGAGGTAGATCTTTGATTATTATAGGAGTTTTTACAATCGGAGGGAGCGAAGGGCTAGGTTTTATTTATTTTTTTTATTTCAAGGGTTGAGTAGTCACTTAATCCTTCTATAATTTTTGGTATTTTCATTCATATCTCAACTATACAGAATATCATAATAAATTCAAGGTACAGCAACTTATAAAAGAATGAATATTTTGCCATAAACCAAATCTTAAAACATACCTAAAAAAATACAAAATAAAGATGAGATAAAATCCTAAAATACGAGAAACAAGGTTACCCTTAACTTTGACCATAATTTACAACACTCCCCCTCAAGGTGGATTGAATATATTATACAATCCCAACTTGCTATTCAAATCTTCAAGGTTAGGTCATGGCAAAAGCTTGGTAATAATATCTGCTAATTGTTGCTTGAGAATGGATGTGGACATAGACACTACGCTCGAAAACTCTAGGAACCAAATCAAGAGATTGAACACAAAGATGAGGAAAAGATTGAAGGAAGACTTAATGAGGAGCAAGTATGTGGGATTGATCAATTATGTGGAAGTGAGATGACCATTCTTGCATTAAGCCACTCCATTTTGTTGATGAGTATCAACACAAATGCCAAGATGAAGAATTCCTTGAGTGATAGGTAATCCTCAAGACATGAACTAAAGAATTATTTTGCATTGTCTATTTTGAGGACACAAAATTTGGTTTGATGTTGAGCTTTTGATCATATTAGGAAAATGTTTGAAATGTTGGTGAGCTTAAGATTTTTTTTTCTTAACAAAGATCCATGTAACATAGATCATCAACAAAGGAAATAAGCTGTCGAGCCACAAAGATATTTTTTGAAGGGTCCCATACATTGCTATCAATAAATGAAAAAGGACTTGACGGTTAAGCAATGTATGGATAGGGGTTTCAAGAATGCTTGATAATCTGAAAAATATCATAATTGAACCATGTAAGATTTTTATTATGAAGAAGATTTTGAAACAATTTGGAGAAATACGAAATATTTGGATGACCTAACTGATCATTTCACTATCTTTGTTGATACAAGAAGAAAACTGATTACTGGAAACAAAGGAAGATAAAAACTAAGAATTGTTTCCAATTGCTAGTGAGCCTTGATCATAGTTGAGAGGATAAAGTCTGAAAAAGTTTAGCACTGCCAATTGTCTTATCCAGTTCGAGTTCTGCATAAATACGTTAGTTTGGATTAAACTTAATCACACATTTAAGATCACGTGTCAATTTACTTAATGAAAGTAAATTACAACCCAAGTCTAGCATATGTTATACAGAGTTAAGATATAAATTTTGAGTAACACTAATGGAACTTGTCCCAACCACTTTGGAGTTTGACCCATTTGCAATTTTCACAAGGAATTGGAGGTGCCGACTTGATAGTTTTGAAATAGTGATGCATTCCTTGTCATATGATATGATGCTCCAGTGTGTCTACAATTCAATTCCTTCCTTTACTAGTTAACAAAGCAGGAGGCATAACTTCCTATGCAGCCAGTATTGCTCCCTGGCCAATGATCTTTTGTTTTGCATCTATTTGTTATTTGCTAAATGGTGTTGACTTCGAATTGTCAGAATTATCTGGAGCTACGTTAACCACATAGGCCCTACCATCATGATCATTGTGATGCTTAGGTTTCCAATTAGCAGGCTTCCCATGGATCTTTTAGCATTTCTTTTATATTACCCACCGTTTTGCAATGCTCACACCGAGGCCTCTCTTGTTTTTGCTTTTTGTCACTTTGTACCATTGAGTTAAAACTACACTAGCAAGTACAAATGCTATCAAGAAAGTAGAGACTGATTCTGATTTGCCCATTATTGCACATTTCCTACTTTCTTCTCGCCTTACTTCAGATAAGGCTTTGCGAAGAGTTTGGCAATGACTTGGTTCCCATGTTTCGACCTCGAACTTCATCAAGATCGTTGATAAGGCCAAGAAGGAATTTGAGTGTCTCTTTTTGCTCAAGAATTTCCGTTTATTGAGTTGTATCATTGGCATACTTCCATGCATAGACTTCAAATAAATCCACTTTTTTCCAATGATTGGAGAGAGTATTAAAGTAATCAGTAACAAATTGATAACCTCAGCAAAAATCATGAAGGATTGTTTATATCCTAAACAATTCTGAAGTGTTCTTCTTACTAGAGTATGTTTCCTTGAGATTTTCCTAAATTTGATGTGTTTTTCCATACAGAAGAAAATTTTCACTTATCTCATTGGTTGTGTAATTAATTAACTACAACATGACCATGTTATTTTATACTTTCCACTTCATGAATTCGGGATTAGTTGCTTTAGGCTGCACAATCTCTTTCGAGAAGTACTCATTCTTACCCTTGCCACATATGAACATCAAGACTGACTATGACCATGGGATATAACGTGACCATTCAATGTGTGACCCGTAATATGGGCAAATGATGATGAATCATATCCTCCTTGACCATTAGAGATTGGTTCGATTGATTTGGAAGAATACATACTCATGAAAAATCGGACAAAATGTAGTAGTGAAGAACTAGGTCAAAAAGAAAAAATTGCAGCAATTAGGCCGACAACAGTCTTCAGCTATAAGCAGTGACGATGTCAGAGGAGCCGGACATTAGTGATGGAGGAGTCAGCGTCGGAGGAGGGTGCTTCAGTCGCGAGTCGGTATCGAATGTGGGTGGTAGTCAGAAACAAGGACTATTGACCATTAACCTTCTGTGGTAGTTTGATTAGTTGGAAAAGCCTTTTGGCCTTTGCATGAACGGTTTTATTGGTAAATTTATAAAGGTTAATAGGAGGTGGTTGAATAAGTTATTGTAGCATATTTCTTGAATTTGAAAACAGATGTTAAAGCGGACATTAGTATCTCATTCCTTGGAAAACTGATTTCATCTAGATTAGGAACTTTATTGCTTTTTTAGCCTTTACAGTCATACAAAGATTGAAGATTCTATCATGGGTTGCTCCCAAACAAAGTTTCGATGGCTTGTTTCAGCTTACTTTACCTATAGTGCCTTCGTTGTTGGTTTGTCCAAAATGTTATAGTTCAATCCGGTGGCTGCTTTTGTTTGGAAATTATTATTATGTATTCCTTTTAAATTTTGAATATATATATAATCATTTTCTTAAAAATTGAGGTCTGAACTTGTGCTTGGTTCGGGATGGAGAAATGAAATACACAATAACTAAGAAATTTCAAGATCGGGACTAGATGTAGTGGCATAGATAATAAAATTATGTAATTATAGTTGAAGAAAATTCAAGATCGGTACTAGATGTAGAATAGATGATAAAGTTTATGTAGTTATAATTTAAAAAAATTGGTTGCAGTTTGGTTTTGATCTAGATGAAAGTAGATATGTACTAAAAATATGTAATAAGATTTATAAAATATGGAGTTGGGGTTACAGCTGAGATGTGGATGAAGACGTGAAATACATAATAATAATAATAGTTTCCTTTATAAAAAACACAAAAACGAAGGATTGAGGTTGGATTTGATGCTGGAATGGAGTTCATCGGGATGAGGTTTAGACAGTGGAATACATTATAAAAGTTTTAAGAATGGGGCCACAGTTGGGGAACAGAGAGAGAAAATGAGATGGGGGGAAGGGGGAGAAGATCTTCATTTAGTTGGTATCTGGTTTTAACTCTCATCATTTTCTCATTGGACATAAGTTATGTCTGCAATTTTGCAATAGAAGTTTTATTATTAATTTTTATCCCATCTTGTTAACATTGGAGTTCATTTTTGTTGCATCTTACATTCAGAAAAAAATTTATCAATTCATTTTTTCTTTTTCTTTCACAGATTTTAGCATTAGAATCTTAGGGAGAATATATATTTTAGCATTAGCAGTAAGTTCTAATGATTTTGACTTGGCTAACACTTTTTTTTTTTTTCTTTTGGTGCAGATCCTGCAGCCACTGCTGTCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCTTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTACTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTCTTCAGGTTAGGAGTTTGCTTTATATATATTTGTTTTGATACCTCTTTTGTTTCTCTAGCTGTATAATCTAGTTTGTTGTTGATCTTGCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTAATTGGCATCCGCAAAGCCAAGGTTAAATTCAAAATTTGCATAAACACATTGCTTCCTTAGTTTTTTATCTGAAATTATGATTCTGGTATATTAAATTGTAGTTGGGGCTTTTCAGTATTTGGTTAAACTGTGGAAATTAAACTCAGGATAGGTGGTTAATGGCCCGTCAACCTTTACTATTTTAGAAGGGATGAATTATGAATATTTTGATACCTTTTCTCACTGCACGCATATACAGGATTCTTTATGAGTTAAAATCTTCATTTGAGTTTTTGATTAGCTAATTACCATCAGCCTCCAGGTTTTGTCTCCCAACAATAAATGCTCCTATTCTTAACATTTTGAATTGAATTGGTACATCTTCCAATAATATTCTGGTTGGTTATGGAACAGACCATTTGGCTTGGCTTCATCTTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCTCAAAAGGCCTCATACCAATGGAGTTAGTATTCCTCACTTGTAAACCTATGATCATTCCCTAAATTAGCCGATGTGGGACTTTCATCATCCAACACCTCCCCTCGAACAAAGCACATGATCATTCCCTAAATTAGCCGATGTGGGACTTTCATCATCCAACACCTCCCCTCGAACAAAGCACGCCTCCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTTACTGCCTTCGTTCCTTCGAGGAGGCTTGACTCCTTTTTTCTTTTTGGAGTCCTTTGTTCGACATTCGACTGCCTTCGTTCCTTCGAGGAGGCTTGACTCCTTTTTTCTTTTTGGAGTCCTTTGTTCGACATTCGAGGATTTGCCAATCTCTTGGCACGGCTAAGTTTAGGGCATGGCTCTGATACCATGTTAGATGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCAAAAGGCCTCATACCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCATTCCCTAAATTAGCCGATGTGGGACTTTCATCATCCAACACATCTGTCTTCAAATAATATAAGAGGTGTTTCTTATCCGAAGAAAAAAAAAATGAATGATAGGATCTGTCTTTCGTGCTCAAATTGTCTGATTACTTCTACAAATCTCGTCCTCTTAAAGCTTCGTATATATTGACAGACTTACAAGATCTTCTATAATATTCTGATGTTAGAAACTTTGATCTTTTGTATGATGATTTCATTCTTTTAATTGTTTTCGGTTCATTTTGAGTCAGTTTGATGAAGGTTCTCTTATTTTTCTATCATTAGGTAATTTGTAATTTTCTAAAGAATGTTATTGTATTATCTTCGTGCTTCACAGTTTCCGGAGTTCATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTCGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGGTTAGTACATTTGGCGAATGCTTCTATCTGCTATTAGTTTCAACATATTTTGATAAGCTACACCATTTGAGGAAGAGATGTTGACTATTTAATAGATTTCTCGTCTGCTGACCAACTTTTAGGCATGAGACTGTGCCATCGTAATTGTGAGATTGTGGGTACTTGCTAACGTTATAGTCCTTAAAATAATCTATTTGGATGTAGTTAACGAGTACATGGGTGGCATGAAAAACGCAAGTTTTGCACTTCAGTCTCTTAACTGGTTTATTTTGTGTTGTGCTATTATAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCTGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAATTTCATGAAAAAAATTCTGGGTATTATAACCTTTGATCTCCACAATTCCGAGAACAATCAAATTCGGTATCAAGGGATGATGGTCGGACAAACTTGCATTTGCTGACATCTGAGTTTTGATAGGTTGCAGGAACTCACCATGCAATTTTCAATAACTCGTACGGGTTCCCTCTCTATTCCTCTTATCTATCGTAGGTGTGAAATGTTCTTGCTACGTGATGTCTGATTACAAAAAAATTGCTTAGCCTGGCCTGTAGGTATTAAGCTAAGTATTAAATTAAGTTGGCAGAGATGTTTAAGGAAGCAGATGTGCAGAATTCTCTTGTTCTGTGATTATCTGTATAAAAGTTGCATATTCTTACACAAGTTTTATTGGGGCACTATCAAGCAAGATGAACAATTCTGTTTTTTCTCTTGGTAAGTTATATTTTGTATGATTTATTGGTTGGTTTCATTTTTGGTTTTGAGAAG

mRNA sequence

ATGAGCGGCGGCCCCTCTGACAATGCCCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCTTGGCTTGTCCTATCAGGATGTGATTGTGAAGCTTCGCTTTTGCAAGTTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTCTTTACCTTGTTCTCTATTATAATCTCCCTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGATCCTGCAGCCACTGCTGTCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCTTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTACTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTCTTCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTAATTGGCATCCGCAAAGCCAAGTTTCCGGAGTTCATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTCGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCTGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAATTTCATGAAAAAAATTCTGGGTATTATAACCTTTGATCTCCACAATTCCGAGAACAATCAAATTCGGTATCAAGGGATGATGGTCGGACAAACTTGCATTTGCTGACATCTGAGTTTTGATAGGTTGCAGGAACTCACCATGCAATTTTCAATAACTCGTACGGGTTCCCTCTCTATTCCTCTTATCTATCGTAGGTGTGAAATGTTCTTGCTACGTGATGTCTGATTACAAAAAAATTGCTTAGCCTGGCCTGTAGGTATTAAGCTAAGTATTAAATTAAGTTGGCAGAGATGTTTAAGGAAGCAGATGTGCAGAATTCTCTTGTTCTGTGATTATCTGTATAAAAGTTGCATATTCTTACACAAGTTTTATTGGGGCACTATCAAGCAAGATGAACAATTCTGTTTTTTCTCTTGGTAAGTTATATTTTGTATGATTTATTGGTTGGTTTCATTTTTGGTTTTGAGAAG

Coding sequence (CDS)

ATGAGCGGCGGCCCCTCTGACAATGCCCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCTTGGCTTGTCCTATCAGGATGTGATTGTGAAGCTTCGCTTTTGCAAGTTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTCTTTACCTTGTTCTCTATTATAATCTCCCTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGATCCTGCAGCCACTGCTGTCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCTTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTACTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTCTTCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTAATTGGCATCCGCAAAGCCAAGTTTCCGGAGTTCATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTCGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCTGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAA

Protein sequence

MSGGPSDNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNLVTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Homology
[Close]
BLAST of CmaCh06G009240 vs. Swiss-Prot
Match: RBL20_ARATH (Rhomboid-like protein 20 OS=Arabidopsis thaliana GN=RBL20 PE=2 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.1e-112
Identity = 212/296 (71.62%), Postives = 247/296 (83.45%), Query Frame = 1 

Query: 1   MSGGPSD--NAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS   NAPVT+ F+I SALFTVFFGIQ RS KLGLSYQD+  K R  KL+MS FAF
Sbjct: 1   MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS  +SLL EV+ +SLLKD   T  NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKD---TTANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASF+PF+ DIPVSTRFRV GV FSDKSFIYLAG+QLLLSSW+RSI PGIC
Sbjct: 121 LTSGPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGN-PPAAPNRDVRGNMPSFMSRQV 240
           GI+AGSLYRLN++GIRKAKFPEF++SFFSR   PS GN PP AP+R++ G +     R+ 
Sbjct: 181 GIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRA 240

Query: 241 ERNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           ER+   P+P++ EP E++I TLVSMGFDRN+ARQAL+ ARNDVN ATNILLE+QSH
Sbjct: 241 ERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]
BLAST of CmaCh06G009240 vs. Swiss-Prot
Match: RBL18_ARATH (Rhomboid-like protein 18 OS=Arabidopsis thaliana GN=RBL18 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.1e-100
Identity = 194/294 (65.99%), Postives = 232/294 (78.91%), Query Frame = 1 

Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVT+ F+IA+ALFTVFFGI+  S KLGLSYQD+  K R  KL++S FAF
Sbjct: 1   MNGGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SST +LL GL+LLY+FRVFERQIGSNKYSVF  FS  +SL+ E + +SL KDP A   NL
Sbjct: 61  SSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPTA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPY L+FASFVPFF DIPV+ RF VLGV FSDKSFIYLAG+QLLLSSW+RSI  GIC
Sbjct: 121 LTSGPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GI+AGSLYRLN+ GIRKAKFPEF++S FSRF LPS+ +    P R      P+   + V 
Sbjct: 181 GIIAGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQAVR 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
               P+P+ +EP E++IATLVSMGFD+N+ARQAL+ ARNDVN ATNILLE+ SH
Sbjct: 241 AYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

[Close]
BLAST of CmaCh06G009240 vs. Swiss-Prot
Match: UBAC2_CHICK (Ubiquitin-associated domain-containing protein 2 OS=Gallus gallus GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.4e-12
Identity = 60/225 (26.67%), Postives = 111/225 (49.33%), Query Frame = 1 

Query: 9   APVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRF--CKLVMSVFAFSSTPELLF 68
           AP++++ ++  +  ++   +  +  +   +Y    +K  F   +LV          +   
Sbjct: 13  APLSKSLLLVPSAISILLTLLFQHYQKFFAYNLQAIKEDFQIWRLVCGRVICLDLKDTFC 72

Query: 69  GLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNLVTSGPYGL 128
              L+Y FR+FER+ GS K+S F L +  +S LF++L +   +      +N + SG  G 
Sbjct: 73  SSLLIYNFRIFERRYGSRKFSSFLLGAWTLSALFDLLLVEAAQYVFGITINSLPSGFLGP 132

Query: 129 LFASFVPFFFDIPVSTRFRVLG-VRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAGSL 188
           +FA FVPF+  IP     +VLG    ++K+ +Y+ GLQLL S     IL  + G+++G  
Sbjct: 133 VFALFVPFYCSIPRVQVTQVLGYFSITNKTLVYILGLQLLTSGSYIWIL-ALSGLISGIC 192

Query: 189 YRLNVIGIRKAK-FPEFISSFFSRFCLPSVGNPPAAPNRDVRGNM 230
           Y  +++ + +    P +++  FS    P   +  A P  ++R  M
Sbjct: 193 YNSSILKVHRILCVPSWVAKIFSWTLEPIFSS--AEPTNEIRVGM 234

[Close]
BLAST of CmaCh06G009240 vs. Swiss-Prot
Match: UBAC2_MACFA (Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.0e-10
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 1 

Query: 70  LLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK-DPAATAVNLVTSGPYGLLF 129
           L+Y FR+FER+ GS K++ F L S ++S LF+ L +  ++     TA + + SG    +F
Sbjct: 76  LIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLVEAMQYFFGITAASNLPSGFLAPVF 135

Query: 130 ASFVPFFFDIPVSTRFRVLG-VRFSDKSFIYLAGLQLLLSS---WRRSILPGICGILAGS 189
           A FVPF+  IP     ++LG +  ++K+ IY+ GLQL  S    W    +  I G+++G 
Sbjct: 136 ALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----IVAISGLMSGL 195

Query: 190 LYRLNVIGIRKAK-FPEFISSFFS 208
            Y   +  + +    P +++ FFS
Sbjct: 196 CYNSKMFQVHQVLCIPSWMAKFFS 215

[Close]
BLAST of CmaCh06G009240 vs. Swiss-Prot
Match: UBAC2_HUMAN (Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens GN=UBAC2 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.9e-10
Identity = 49/144 (34.03%), Postives = 80/144 (55.56%), Query Frame = 1 

Query: 70  LLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK-DPAATAVNLVTSGPYGLLF 129
           L+Y FR+FER+ GS K++ F L S ++S LF+ L I  ++     TA + + SG    +F
Sbjct: 76  LIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLIEAMQYFFGITAASNLPSGFLAPVF 135

Query: 130 ASFVPFFFDIPVSTRFRVLG-VRFSDKSFIYLAGLQLLLSS---WRRSILPGICGILAGS 189
           A FVPF+  IP     ++LG +  ++K+ IY+ GLQL  S    W    +  I G+++G 
Sbjct: 136 ALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----IVAISGLMSGL 195

Query: 190 LYRLNVIGIRKAK-FPEFISSFFS 208
            Y   +  + +    P +++ FFS
Sbjct: 196 CYDSKMFQVHQVLCIPSWMAKFFS 215

[Close]
BLAST of CmaCh06G009240 vs. TrEMBL
Match: A0A0A0LG81_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G840970 PE=4 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 9.9e-138
Identity = 264/294 (89.80%), Postives = 274/294 (93.20%), Query Frame = 1 

Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLR  KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSI  SLLFEVLAISLLKDPAA   NL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSR  LPS GNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RN+  VPTA+EP ED+IATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQ H
Sbjct: 241 RNYPSVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 291

[Close]
BLAST of CmaCh06G009240 vs. TrEMBL
Match: A0A061EVJ7_THECC (Ubiquitin-associated (UBA) protein isoform 1 OS=Theobroma cacao GN=TCM_024070 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.9e-117
Identity = 221/296 (74.66%), Postives = 255/296 (86.15%), Query Frame = 1 

Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTR F+IA ALFTVFFGIQ RS KLGLSYQD+  KL   KL++SVFAF
Sbjct: 1   MNGGPSGFNNAPVTRIFLIACALFTVFFGIQGRSFKLGLSYQDIFRKLSIWKLIVSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS+++S  FEV+A+++LKDP A   NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVMVSFFFEVMALAILKDPTA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASFVPF+FDIPVST FR+ GVRFSDKSFIYLAGLQLLLSSW+RS+LPGIC
Sbjct: 121 LTSGPYGLIFASFVPFYFDIPVSTWFRIFGVRFSDKSFIYLAGLQLLLSSWKRSLLPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV  IR+AKFPEF++SFFSR   PS GNPP A  R++ GN+PS+ +RQ E
Sbjct: 181 GILAGSLYRLNVFHIRRAKFPEFVTSFFSRLSWPSTGNPPTASARNLAGNVPSYTTRQAE 240

Query: 241 RNF--TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           R +  T  P+A EPPED IATLVSMGFDRNSARQAL+ ARNDVN ATNILLE+Q+H
Sbjct: 241 RTYPSTAAPSAIEPPEDCIATLVSMGFDRNSARQALVHARNDVNAATNILLEAQAH 293

[Close]
BLAST of CmaCh06G009240 vs. TrEMBL
Match: A0A0D2V7D6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G001400 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.5e-117
Identity = 220/296 (74.32%), Postives = 256/296 (86.49%), Query Frame = 1 

Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVT+TF+IASALFTVFFGIQ RS KLGLSYQD+  KL   KL+ SVFAF
Sbjct: 1   MNGGPSGFNNAPVTKTFVIASALFTVFFGIQGRSFKLGLSYQDIFTKLSIWKLITSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS++ S LFEV+A+++LKDP +   NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVMASFLFEVMAVAILKDPTS---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASFVPFFFDIPVST FR+ GVRFS+KSFIYLAGLQLLLSSW+RS+LPGIC
Sbjct: 121 LTSGPYGLIFASFVPFFFDIPVSTWFRIFGVRFSNKSFIYLAGLQLLLSSWKRSLLPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV  IRKAKFPEFI+SFFSR   PS+GNPP  P R++ GN+PS+ +RQVE
Sbjct: 181 GILAGSLYRLNVFRIRKAKFPEFITSFFSRLSWPSIGNPPTTPARNLAGNVPSYTTRQVE 240

Query: 241 RNFTPVPTAS--EPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           R +     +S  EP ED++ATLVSMGFD+NSARQAL+ ARND+N ATNILLE+QSH
Sbjct: 241 RTYPSAVASSAIEPSEDAVATLVSMGFDQNSARQALVHARNDINAATNILLEAQSH 293

[Close]
BLAST of CmaCh06G009240 vs. TrEMBL
Match: B9S843_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0692460 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 4.3e-117
Identity = 223/293 (76.11%), Postives = 252/293 (86.01%), Query Frame = 1 

Query: 1   MSGGPSDNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAFSS 60
           M+GGPSDNAPVTRTF+IA A+FT+ FGIQ    KLGLSYQD+  KLR  KL+ SVFAFSS
Sbjct: 1   MNGGPSDNAPVTRTFVIACAIFTLSFGIQGGFRKLGLSYQDIFGKLRIWKLIASVFAFSS 60

Query: 61  TPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNLVT 120
           TPELLFGL+LLYYFRVFERQIGSNKYSVF LFSI ISL+FEVLA+ LLKDP A   NL+T
Sbjct: 61  TPELLFGLYLLYYFRVFERQIGSNKYSVFILFSIAISLVFEVLALGLLKDPTA---NLLT 120

Query: 121 SGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGI 180
           SGPYG++FASFVPFFFDIPVSTRFRV GVRFSDKSF+YLAGLQLLLSSW+RS+LPG+CGI
Sbjct: 121 SGPYGVIFASFVPFFFDIPVSTRFRVFGVRFSDKSFVYLAGLQLLLSSWKRSVLPGMCGI 180

Query: 181 LAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVERN 240
            AGSLYRLN++ IRKAKFPEFI+SFFSR   PS G+P  A  R + G+ PS+  R VER 
Sbjct: 181 FAGSLYRLNLLSIRKAKFPEFITSFFSRLAWPSSGSPRGATTRSIPGSAPSYPGRHVERT 240

Query: 241 FTPVP-TASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           + P+P   SEPPEDSIATLVSMGFDRNSARQAL++ARND+N ATNILLE+QSH
Sbjct: 241 Y-PIPMVPSEPPEDSIATLVSMGFDRNSARQALVQARNDINAATNILLEAQSH 289

[Close]
BLAST of CmaCh06G009240 vs. TrEMBL
Match: M5W2K1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008900mg PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 3.1e-115
Identity = 222/295 (75.25%), Postives = 254/295 (86.10%), Query Frame = 1 

Query: 1   MSGGPSD--NAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS   NAPVTR F+IASALFTVFFG Q RS KLGLSY D+  K R  KL++S+FAF
Sbjct: 24  MNGGPSGFHNAPVTRAFVIASALFTVFFGFQGRSSKLGLSYLDIFGKFRLWKLIVSIFAF 83

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS+ +SLLFE+LA++ LKDPA   VNL
Sbjct: 84  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVTVSLLFEILALAYLKDPA---VNL 143

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGL+FASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSW+RSILPG+ 
Sbjct: 144 VTSGPYGLIFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWKRSILPGVF 203

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GIL GSLY LNV  IRKAKFPE I+SFFSR   PS G+PPAAP R++ G+   F +RQVE
Sbjct: 204 GILCGSLYHLNVFHIRKAKFPEVIASFFSRISWPSTGSPPAAPTRNIVGSATPFTARQVE 263

Query: 241 RNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RN+ + + +A+EP E SIATLVSMGFDRNSARQAL++ARNDVN+ATNILLE+Q+H
Sbjct: 264 RNYPSALASATEPTEASIATLVSMGFDRNSARQALVQARNDVNVATNILLEAQAH 315

[Close]
BLAST of CmaCh06G009240 vs. TAIR10
Match: AT3G56740.1 (AT3G56740.1 Ubiquitin-associated (UBA) protein)

HSP 1 Score: 406.8 bits (1044), Expect = 1.2e-113
Identity = 212/296 (71.62%), Postives = 247/296 (83.45%), Query Frame = 1 

Query: 1   MSGGPSD--NAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS   NAPVT+ F+I SALFTVFFGIQ RS KLGLSYQD+  K R  KL+MS FAF
Sbjct: 1   MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS  +SLL EV+ +SLLKD   T  NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKD---TTANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASF+PF+ DIPVSTRFRV GV FSDKSFIYLAG+QLLLSSW+RSI PGIC
Sbjct: 121 LTSGPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGN-PPAAPNRDVRGNMPSFMSRQV 240
           GI+AGSLYRLN++GIRKAKFPEF++SFFSR   PS GN PP AP+R++ G +     R+ 
Sbjct: 181 GIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRA 240

Query: 241 ERNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           ER+   P+P++ EP E++I TLVSMGFDRN+ARQAL+ ARNDVN ATNILLE+QSH
Sbjct: 241 ERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]
BLAST of CmaCh06G009240 vs. TAIR10
Match: AT2G41160.1 (AT2G41160.1 Ubiquitin-associated (UBA) protein)

HSP 1 Score: 366.3 bits (939), Expect = 1.7e-101
Identity = 194/294 (65.99%), Postives = 232/294 (78.91%), Query Frame = 1 

Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVT+ F+IA+ALFTVFFGI+  S KLGLSYQD+  K R  KL++S FAF
Sbjct: 1   MNGGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SST +LL GL+LLY+FRVFERQIGSNKYSVF  FS  +SL+ E + +SL KDP A   NL
Sbjct: 61  SSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPTA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPY L+FASFVPFF DIPV+ RF VLGV FSDKSFIYLAG+QLLLSSW+RSI  GIC
Sbjct: 121 LTSGPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GI+AGSLYRLN+ GIRKAKFPEF++S FSRF LPS+ +    P R      P+   + V 
Sbjct: 181 GIIAGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQAVR 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
               P+P+ +EP E++IATLVSMGFD+N+ARQAL+ ARNDVN ATNILLE+ SH
Sbjct: 241 AYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

[Close]
BLAST of CmaCh06G009240 vs. NCBI nr
Match: gi|659129986|ref|XP_008464944.1| (PREDICTED: ubiquitin-associated domain-containing protein 2-like [Cucumis melo])

HSP 1 Score: 501.9 bits (1291), Expect = 7.5e-139
Identity = 265/294 (90.14%), Postives = 276/294 (93.88%), Query Frame = 1 

Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLRF KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSII SLLFEVLAISLLKDPAA   NL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSR  LPS GNPPAAPNRDVRGNMPSFMSR VE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RN+   P+A+EPPED+IATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQSH
Sbjct: 241 RNYPSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]
BLAST of CmaCh06G009240 vs. NCBI nr
Match: gi|449446724|ref|XP_004141121.1| (PREDICTED: ubiquitin-associated domain-containing protein 2 [Cucumis sativus])

HSP 1 Score: 497.7 bits (1280), Expect = 1.4e-137
Identity = 264/294 (89.80%), Postives = 274/294 (93.20%), Query Frame = 1 

Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLR  KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSI  SLLFEVLAISLLKDPAA   NL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSR  LPS GNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RN+  VPTA+EP ED+IATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQ H
Sbjct: 241 RNYPSVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 291

[Close]
BLAST of CmaCh06G009240 vs. NCBI nr
Match: gi|1009170782|ref|XP_015866381.1| (PREDICTED: rhomboid-like protein 20 [Ziziphus jujuba])

HSP 1 Score: 453.4 bits (1165), Expect = 3.1e-124
Identity = 234/294 (79.59%), Postives = 261/294 (88.78%), Query Frame = 1 

Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTF+IA ALFTVFFGIQ RS KLGLSY D+  KLR  KL+MSV AF
Sbjct: 1   MNGGPSGFNNAPVTRTFLIACALFTVFFGIQGRSSKLGLSYLDIFGKLRIWKLIMSVLAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS+ ++LLFEV A++LLKDPAA   NL
Sbjct: 61  SSTPELIFGLYLLYYFRVFERQIGSNKYSVFILFSLTVALLFEVFALALLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGL+FASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSW+RSILPG+C
Sbjct: 121 VTSGPYGLIFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWKRSILPGLC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLN+  IR+AKFPEF++SFFSR   PSVGNPPAAP R+V GN PS+   QVE
Sbjct: 181 GILAGSLYRLNLFRIRRAKFPEFVASFFSRLSWPSVGNPPAAPTRNVVGNAPSYTGHQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RN+  +PT++EPPEDSIATLVSMGFDRN+ARQAL+ ARNDVN ATNILLESQSH
Sbjct: 241 RNYPSMPTSTEPPEDSIATLVSMGFDRNAARQALVHARNDVNTATNILLESQSH 291

[Close]
BLAST of CmaCh06G009240 vs. NCBI nr
Match: gi|590634266|ref|XP_007028326.1| (Ubiquitin-associated (UBA) protein isoform 1 [Theobroma cacao])

HSP 1 Score: 430.3 bits (1105), Expect = 2.8e-117
Identity = 221/296 (74.66%), Postives = 255/296 (86.15%), Query Frame = 1 

Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTR F+IA ALFTVFFGIQ RS KLGLSYQD+  KL   KL++SVFAF
Sbjct: 1   MNGGPSGFNNAPVTRIFLIACALFTVFFGIQGRSFKLGLSYQDIFRKLSIWKLIVSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS+++S  FEV+A+++LKDP A   NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVMVSFFFEVMALAILKDPTA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASFVPF+FDIPVST FR+ GVRFSDKSFIYLAGLQLLLSSW+RS+LPGIC
Sbjct: 121 LTSGPYGLIFASFVPFYFDIPVSTWFRIFGVRFSDKSFIYLAGLQLLLSSWKRSLLPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV  IR+AKFPEF++SFFSR   PS GNPP A  R++ GN+PS+ +RQ E
Sbjct: 181 GILAGSLYRLNVFHIRRAKFPEFVTSFFSRLSWPSTGNPPTASARNLAGNVPSYTTRQAE 240

Query: 241 RNF--TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           R +  T  P+A EPPED IATLVSMGFDRNSARQAL+ ARNDVN ATNILLE+Q+H
Sbjct: 241 RTYPSTAAPSAIEPPEDCIATLVSMGFDRNSARQALVHARNDVNAATNILLEAQAH 293

[Close]
BLAST of CmaCh06G009240 vs. NCBI nr
Match: gi|823262613|ref|XP_012464055.1| (PREDICTED: ubiquitin-associated domain-containing protein 2-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 429.9 bits (1104), Expect = 3.6e-117
Identity = 220/296 (74.32%), Postives = 256/296 (86.49%), Query Frame = 1 

Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVT+TF+IASALFTVFFGIQ RS KLGLSYQD+  KL   KL+ SVFAF
Sbjct: 1   MNGGPSGFNNAPVTKTFVIASALFTVFFGIQGRSFKLGLSYQDIFTKLSIWKLITSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS++ S LFEV+A+++LKDP +   NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVMASFLFEVMAVAILKDPTS---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASFVPFFFDIPVST FR+ GVRFS+KSFIYLAGLQLLLSSW+RS+LPGIC
Sbjct: 121 LTSGPYGLIFASFVPFFFDIPVSTWFRIFGVRFSNKSFIYLAGLQLLLSSWKRSLLPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV  IRKAKFPEFI+SFFSR   PS+GNPP  P R++ GN+PS+ +RQVE
Sbjct: 181 GILAGSLYRLNVFRIRKAKFPEFITSFFSRLSWPSIGNPPTTPARNLAGNVPSYTTRQVE 240

Query: 241 RNFTPVPTAS--EPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           R +     +S  EP ED++ATLVSMGFD+NSARQAL+ ARND+N ATNILLE+QSH
Sbjct: 241 RTYPSAVASSAIEPSEDAVATLVSMGFDQNSARQALVHARNDINAATNILLEAQSH 293

The following BLAST results are available for this feature:
BLAST of CmaCh06G009240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RBL20_ARATH2.1e-11271.62Rhomboid-like protein 20 OS=Arabidopsis thaliana GN=RBL20 PE=2 SV=1[more]
RBL18_ARATH3.1e-10065.99Rhomboid-like protein 18 OS=Arabidopsis thaliana GN=RBL18 PE=2 SV=1[more]
UBAC2_CHICK1.4e-1226.67Ubiquitin-associated domain-containing protein 2 OS=Gallus gallus GN=UBAC2 PE=2 ... [more]
UBAC2_MACFA3.0e-1033.33Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis GN=UBAC2... [more]
UBAC2_HUMAN3.9e-1034.03Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens GN=UBAC2 PE=1 S... [more]
BLAST of CmaCh06G009240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LG81_CUCSA9.9e-13889.80Uncharacterized protein OS=Cucumis sativus GN=Csa_3G840970 PE=4 SV=1[more]
A0A061EVJ7_THECC1.9e-11774.66Ubiquitin-associated (UBA) protein isoform 1 OS=Theobroma cacao GN=TCM_024070 PE... [more]
A0A0D2V7D6_GOSRA2.5e-11774.32Uncharacterized protein OS=Gossypium raimondii GN=B456_013G001400 PE=4 SV=1[more]
B9S843_RICCO4.3e-11776.11Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0692460 PE=4 SV=1[more]
M5W2K1_PRUPE3.1e-11575.25Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008900mg PE=4 SV=1[more]
BLAST of CmaCh06G009240 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G56740.11.2e-11371.62 Ubiquitin-associated (UBA) protein[more]
AT2G41160.11.7e-10165.99 Ubiquitin-associated (UBA) protein[more]
BLAST of CmaCh06G009240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129986|ref|XP_008464944.1|7.5e-13990.14PREDICTED: ubiquitin-associated domain-containing protein 2-like [Cucumis melo][more]
gi|449446724|ref|XP_004141121.1|1.4e-13789.80PREDICTED: ubiquitin-associated domain-containing protein 2 [Cucumis sativus][more]
gi|1009170782|ref|XP_015866381.1|3.1e-12479.59PREDICTED: rhomboid-like protein 20 [Ziziphus jujuba][more]
gi|590634266|ref|XP_007028326.1|2.8e-11774.66Ubiquitin-associated (UBA) protein isoform 1 [Theobroma cacao][more]
gi|823262613|ref|XP_012464055.1|3.6e-11774.32PREDICTED: ubiquitin-associated domain-containing protein 2-like isoform X1 [Gos... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf
IPR015940UBA
IPR022764Peptidase_S54_rhomboid_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004252serine-type endopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0004252 serine-type endopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G009240.1CmaCh06G009240.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009060UBA-likeunknownSSF46934UBA-likecoord: 245..290
score: 7.66
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 251..286
score: 7.8
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 251..288
score: 2.6
IPR015940Ubiquitin-associated domainPROFILEPS50030UBAcoord: 249..289
score: 15
IPR022764Peptidase S54, rhomboid domainGENE3DG3DSA:1.20.1540.10coord: 10..185
score: 5.
NoneNo IPR availableGENE3DG3DSA:1.10.8.10coord: 245..289
score: 3.3
NoneNo IPR availablePANTHERPTHR12917ASPARTYL PROTEASE DDI-RELATEDcoord: 1..289
score: 4.3E
NoneNo IPR availablePANTHERPTHR12917:SF20SUBFAMILY NOT NAMEDcoord: 1..289
score: 4.3E
NoneNo IPR availableunknownSSF144091Rhomboid-likecoord: 7..187
score: 3.53

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G009240CmoCh06G009420Cucurbita moschata (Rifu)cmacmoB833
CmaCh06G009240Cp4.1LG08g00020Cucurbita pepo (Zucchini)cmacpeB850
CmaCh06G009240Carg22320Silver-seed gourdcarcmaB0820
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G009240Cucurbita maxima (Rimu)cmacmaB027
CmaCh06G009240Cucurbita maxima (Rimu)cmacmaB290
CmaCh06G009240Cucumber (Gy14) v1cgycmaB0728
CmaCh06G009240Cucumber (Gy14) v1cgycmaB0944
CmaCh06G009240Cucurbita moschata (Rifu)cmacmoB802
CmaCh06G009240Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G009240Wild cucumber (PI 183967)cmacpiB830
CmaCh06G009240Wild cucumber (PI 183967)cmacpiB844
CmaCh06G009240Cucumber (Chinese Long) v2cmacuB818
CmaCh06G009240Cucumber (Chinese Long) v2cmacuB831
CmaCh06G009240Melon (DHL92) v3.5.1cmameB753
CmaCh06G009240Melon (DHL92) v3.5.1cmameB766
CmaCh06G009240Watermelon (Charleston Gray)cmawcgB723
CmaCh06G009240Watermelon (Charleston Gray)cmawcgB738
CmaCh06G009240Watermelon (97103) v1cmawmB786
CmaCh06G009240Watermelon (97103) v1cmawmB799
CmaCh06G009240Cucurbita pepo (Zucchini)cmacpeB841
CmaCh06G009240Cucurbita pepo (Zucchini)cmacpeB855
CmaCh06G009240Bottle gourd (USVL1VR-Ls)cmalsiB766
CmaCh06G009240Bottle gourd (USVL1VR-Ls)cmalsiB753
CmaCh06G009240Cucumber (Gy14) v2cgybcmaB430
CmaCh06G009240Cucumber (Gy14) v2cgybcmaB444
CmaCh06G009240Melon (DHL92) v3.6.1cmamedB853
CmaCh06G009240Melon (DHL92) v3.6.1cmamedB863
CmaCh06G009240Silver-seed gourdcarcmaB1405
CmaCh06G009240Cucumber (Chinese Long) v3cmacucB0965
CmaCh06G009240Cucumber (Chinese Long) v3cmacucB0982
CmaCh06G009240Watermelon (97103) v2cmawmbB841
CmaCh06G009240Watermelon (97103) v2cmawmbB857
CmaCh06G009240Wax gourdcmawgoB0994
CmaCh06G009240Wax gourdcmawgoB1017