CmaCh06G009240.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G009240.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ubiquitin-associated/TS-N domain protein
Location	Cma_Chr06 : 6127113 .. 6139028 (-)
Sequence length	1350

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGGCGGCCCCTCTGGTTTCAGTGCGTCCTCTTCAATTTCTCTCCTCTTCTGATGCTTAACCACCCACTTTCTCCCTTTTTCAATTTCTGTTCCACCTTGATTCATTTGCTCCTGTTCTTCTCTCTTTCGCAGACAATGCCCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCTTGGCTTGTCCTATCAGGTACTCTTCTCTCTCTTTCACTACCCAGATGCTTTTTCGCCAACTGTGGGTTGGTTTTATGTTCGAGACTAGGGTAGATTCGCTTCTTCGGTTAAGACGAGTCCTTTGCTTGGTTGAGTGTTTGACCTTCGATTCCGCGATGTATTGAGCATATACCCAGATTATAGATCCAACCGGCCGAGTTAATTGATGCATGATTGAAACTGGGGATCCTCTTTTCCTCCTGTATGTAATCACTTAGTTTAATCGACCATAGGGGCCTCTGCAATTCTGGTTTTGAATTGTATCTATCTTTAAGTAATTTTTTTTTTTTTTTTTTGTTGCTGGCTGGGGAAGGTGTAGCAGAAGTTGTCTCGTGGCTGGTTGTACGTTATGTGACTTGCCTATGAAATGTTTAGGTGTTCCTATCAGGAGATAATCCAAGTTCAGTAACATTTTTGGAGCCTGGTAGATATAAATTTTTGGTAGACTAAATAAGGATTAGTTCTAATTTGTGAAAAGAAGGTAGACTTTGGTACAGTCAGTTCCTAATTAAGTCATCTAATGAGATATTACATCATGTCCCTTCAATAAATCCCTAGAAAGAGGATCGTACTGACATGGGAAAAATAATTGTGAAGATTTTTGCATGAGCTTAGGAGATTTGGCACAATGTTATTGTCATCAAATTTGGATGAAAGAGGCAGGTTATTTTGAAGTAAAAGAACCTTAGTTGGTAACACCCATGGTCTTTCATCCTAAAGCTATGAACTAGTGTTGTGAAATTTTTGGAATTAAGATGGTGGGACGATATTTGGTTGGATGGGCAACTCTTGAATGACCCTTTTCCAATGTTATTCTCTGTTGCTATAAAAATTGGAGGTTGGATTAGGATTTTCAGGATTTGGAGACAAGAAACTGGAGATTGTACTCGGAGCTTAGAAGGAAGTAGCCGAATTTTCAAGGCTGATAGAGAGGTTAAATGTGGAACAATTAGGAATAAGAATAGCTCAAGACAATATAGCGTTAGTGCTATATGCTTCAAGGGAATTTTCAACAAGATCTATGCTATTTAAAATTTTAGTGGCAGAAACAATCTTGGCAGAGCATCTGATTAAAGGAAAAATAGCAAATATCCATATCCACATGTATCTATATATATACATATTCATTTATGGGTATGCCTTTTTAAGCTATATTAATATATATTTATTATTATTATTATTATTATCGGAGTAAGGGTCTCACTATTGCTATATGTTTTAAGCTTCTTCACTATATGATGGGCTTTTTATACTATAAAGAGTAATGCCAAACAATTACTCAGTGGTCAGGTACTTTAGAGAAAGGAGGCAGTGATTCCATTTTAGGAGAAATTTGGTTGGAGAGAAATTAAGGATTTGTATTAGACATAAGAAAAGGTGATGAGAAGGTTTTAACACTTGTTGTTGGTGCTCTTTGTTAAGCTCCCTTTTTCAGATACCTAAAGCCAAGTAGATGCATTAAAATGTGCCCGATCTCAAATATTCTCCCATGATTTGTCAATTTCTGACGAGATTCTTCTGTTCTTTTCAATCTAATATTTTACAAGATTGAAAAAACTAGCTTGCTAGAGTAAACAACTTCATCCCTAAACAAAGGACTCAAGATAGCTTCCTCTATCATTCCATGAAAACGTGAAATAAAAAACATAGACATGCTAGCAATCTTCCATAATCGAGACCAACATGGCAGCAAAAGGGCATAGCAACTATAATTATCTGTAGCCCCCTGCTCAAATGATAACAATTGGGGAAGGACAATACAAAATGGTGTGGCTAAAAAAGTAATAATTCTTTCTTAAGTGTCTGGAAAAGAACCATTTTTTTGTGAGATTGTAATCTTTTGAAGTTTTGAGAAGAAGTGAAGAGAAGAAAGGACTGGAGCATGGAGTAAAAAAAAACTAAATGATTGTTCTAATACTTGCAAGTTTATAACTACAAGGAGAAAGTCCATACATGACTATGTTTGTGTCTTACACTTTTATCCTTTTTTCTTCTTATATCATATTTTTGGGGCTAAGGAATGAGAAACACCTTTCCCTTGCATCATGATTTCAATTTCATTTCATTCGAAAAGATCCAAGTTTGTCTCAACAATGTTTTTGTCATTCCAATCGTGTTCCATTAATTAGGAACAACCAAGCTGATAAAATTTGATAACTCTCAGATGGAGAATTAGAATGAAAAATCCATTAGATGACAAATTTTGGTTCTAAGGCATCTCAGGCAGTGAATCAAATCCATGGTGCAAGGTTTTCTTATTAACATGCAATATTGATTTAGAAAAGTGAAGTGGAAATTGGAATTTATTTATATTTCTATAAACTAATATTTTTTTCATAATTTTTTTGTGTTGATAAGAAACAAGATATGATGTGTGGGAGGAAAGAAATATTTTCATGCACGATATGAAAATATTATGAAAGATGGGAGGAGAGCCAGGCACAAAACTTCCTGTTGCCCATGGGAACATTCAGGCTAGTGTAAAGGGTGGTACACCAATAAAGAGCCAAGAAAAGAGAACCAGATTTAAAAAACAATCAAAAGTCTCTTAGGCATCAGTATCATTGTTCCTTATTGGCCAATTCCTCCTATGAATAAAAGGACCTACCTTGAAAGAGTCTAGATATATGCAACCACAAAAGAAGAATTACAGCCAAAAAAGGCCAGAGAAAAGAGGGAGGAAGCTTCTATCTCCGTCAATATAAGTTTTTCAAAAGATTAGATTACGAACTATCTATGAGAGGCACTCCACTTCAAGCCCTATGCTGTATATTTCGACTCAATGTAATTTTTTTTGTAGCATCTTTATAAATCCCGTCGATTCTTTCCGACCCAAAATTTGAATACAAACCTTTAGAAATGGATACTGAAACAAGGAGCTTGCCTTTGTCCCTATATTGCTGTGGGTCTGTGAATGATTTCTACAATAGAAGTTTTAGATGAATGCTCTTTTATTACTTGGTGGTTACGGGTTTAATTTGAAAGGGAAAGAAGTTGGAACTAGTTTACTTGCTTGTAAAATTGGAAATGGGAGGTTCTTTGTACAGGAACCAGTATTTTATGAAATTCTTTATAAGATTCTAATATAATGAAGTCGCAGTGGTAGGAAGTTTTTGTTTAAAAGTTTGGACGGGACATGAATTTGAATAAGCTGCGCTAAAGGGATCCACTGGTAGAAATATTATTTTTATCATTTTAACTGCTGCTATTCCATCTTTGTTGCATATATAATCCTATTATATCGGACTTAAAGTCGACTTATTTTGTCCTTTTTCCATGATAGAGATTACCTTAATTTGTGTGGTAGAAAGGACACTTTTGACTAGTTAATTGTCATCTTTATGGCAGGATGTGATTGTGAAGCTTCGCTTTTGCAAGTTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTAAGTTTTATTCAATTCATACTGCAGGATTTTATTTAAACATGTCATAATGAAGCAACCAATCACGATCTTTAAATTGATGGCTCACATTAATACAATGCAGTGCCTGATGTATTAACTCTTGTAACCATGTATTTGTTTATCTTCAATGAATAGAAGCATAAAAAATCAGTAAGTGTATAAAAGTAGATGTAGTATAAGTTTTGTGGTCATACATGTCATGCCGTATTCATTTGGAATACTAAAAATGGTATTGAATTAATACTATGCCCCTTCTGATAACATACTAATCTTCCTAACATATCCATTACTAGTACTGACAACATTTTTGTGGTCATTGACATGACAAAGTGGGCACCTATATTTGAAATAGTATATTGTTTTTCATTTCTATTTGCTTCATAGAATAAGGTTAGCAGACTGAATTTAGTACGATCATTGCCTTTAGTTTCTATTCTAGAAAACAGATACGTTTGGGTCAGGAAGTGTGAGAGCATGCTAATATTGATGGTGATAATTTGTTAATTATAACTTTCTTCACTCCAATTGTCAAACATATTATGTTTCAGTTTTTGTGCTCAAAACTCTTTTTCCCCCCTTAGTTGATGTGTATTTCTTCGTAAAAAGATTTATGTTAATATTCTGTTGTTTTGCAGGTCTTTACCTTGTTCTCTATTATAATCTCCCTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGGTATGCATTTTGGTTTAATCTACTAATATGCTTGGGCAGCTAGTACACAAGCTCATGTTTGATTATTGGTTTGATGTTGTTTAACATCCCTTTCCTTTTTAAATTTTTAGAGGTGAACTCTCCTTCTTTGATTCTTTTTCTCCTGTAAAATTTGTTAACTTGGATTGGAAGTCCTTCCTGATCTTTCTGACATTTTCGCTTGTAAGCCTTTTTATACCCATCTAGTTTCTTCTCTCTCTACTTATCTCTTCAGAAACCTTTGAAAGTTGATAATCCGAATGAAATTCCATTTCTTTTTCCCTGATTGATGGCTTTAGGAAGAATTAACACCTTGGATTTTATCCAGAGAACCCATTACGTTGTCCTTGGCCCCAATTGGTGCTTTATGTGCAAGGGGCCTTGAGAAGATTTTTAACCGTTTGTTATGGCTTTGTTTGCTTGCTTCTCTGTTGTGGAGTCAGTTTTGGCATATTTTTGGTTCCTACCTGAACGTCTGTATGATGGTGGTGCGACATTTGATCCTCCATTTTGGGATAAAGACTGTTATTGCAAGCTTGCTTTTGTGTTGTTCTTTGAAGTATTTGGTTTGAAGGAAACAGGAGAGCCTTCATGGTTTTAGAACAGTTCCTTCCTAGACATCTTCTGACCACTCCTCTTAAGATATCTTAATTCTACGAGTCTTGAATCAAACAGCCACTTAAATTTGAGAGCTAGATGGAGATGGTGAGGTAGATCTTTGATTATTATAGGAGTTTTTACAATCGGAGGGAGCGAAGGGCTAGGTTTTATTTATTTTTTTTATTTCAAGGGTTGAGTAGTCACTTAATCCTTCTATAATTTTTGGTATTTTCATTCATATCTCAACTATACAGAATATCATAATAAATTCAAGGTACAGCAACTTATAAAAGAATGAATATTTTGCCATAAACCAAATCTTAAAACATACCTAAAAAAATACAAAATAAAGATGAGATAAAATCCTAAAATACGAGAAACAAGGTTACCCTTAACTTTGACCATAATTTACAACACTCCCCCTCAAGGTGGATTGAATATATTATACAATCCCAACTTGCTATTCAAATCTTCAAGGTTAGGTCATGGCAAAAGCTTGGTAATAATATCTGCTAATTGTTGCTTGAGAATGGATGTGGACATAGACACTACGCTCGAAAACTCTAGGAACCAAATCAAGAGATTGAACACAAAGATGAGGAAAAGATTGAAGGAAGACTTAATGAGGAGCAAGTATGTGGGATTGATCAATTATGTGGAAGTGAGATGACCATTCTTGCATTAAGCCACTCCATTTTGTTGATGAGTATCAACACAAATGCCAAGATGAAGAATTCCTTGAGTGATAGGTAATCCTCAAGACATGAACTAAAGAATTATTTTGCATTGTCTATTTTGAGGACACAAAATTTGGTTTGATGTTGAGCTTTTGATCATATTAGGAAAATGTTTGAAATGTTGGTGAGCTTAAGATTTTTTTTTCTTAACAAAGATCCATGTAACATAGATCATCAACAAAGGAAATAAGCTGTCGAGCCACAAAGATATTTTTTGAAGGGTCCCATACATTGCTATCAATAAATGAAAAAGGACTTGACGGTTAAGCAATGTATGGATAGGGGTTTCAAGAATGCTTGATAATCTGAAAAATATCATAATTGAACCATGTAAGATTTTTATTATGAAGAAGATTTTGAAACAATTTGGAGAAATACGAAATATTTGGATGACCTAACTGATCATTTCACTATCTTTGTTGATACAAGAAGAAAACTGATTACTGGAAACAAAGGAAGATAAAAACTAAGAATTGTTTCCAATTGCTAGTGAGCCTTGATCATAGTTGAGAGGATAAAGTCTGAAAAAGTTTAGCACTGCCAATTGTCTTATCCAGTTCGAGTTCTGCATAAATACGTTAGTTTGGATTAAACTTAATCACACATTTAAGATCACGTGTCAATTTACTTAATGAAAGTAAATTACAACCCAAGTCTAGCATATGTTATACAGAGTTAAGATATAAATTTTGAGTAACACTAATGGAACTTGTCCCAACCACTTTGGAGTTTGACCCATTTGCAATTTTCACAAGGAATTGGAGGTGCCGACTTGATAGTTTTGAAATAGTGATGCATTCCTTGTCATATGATATGATGCTCCAGTGTGTCTACAATTCAATTCCTTCCTTTACTAGTTAACAAAGCAGGAGGCATAACTTCCTATGCAGCCAGTATTGCTCCCTGGCCAATGATCTTTTGTTTTGCATCTATTTGTTATTTGCTAAATGGTGTTGACTTCGAATTGTCAGAATTATCTGGAGCTACGTTAACCACATAGGCCCTACCATCATGATCATTGTGATGCTTAGGTTTCCAATTAGCAGGCTTCCCATGGATCTTTTAGCATTTCTTTTATATTACCCACCGTTTTGCAATGCTCACACCGAGGCCTCTCTTGTTTTTGCTTTTTGTCACTTTGTACCATTGAGTTAAAACTACACTAGCAAGTACAAATGCTATCAAGAAAGTAGAGACTGATTCTGATTTGCCCATTATTGCACATTTCCTACTTTCTTCTCGCCTTACTTCAGATAAGGCTTTGCGAAGAGTTTGGCAATGACTTGGTTCCCATGTTTCGACCTCGAACTTCATCAAGATCGTTGATAAGGCCAAGAAGGAATTTGAGTGTCTCTTTTTGCTCAAGAATTTCCGTTTATTGAGTTGTATCATTGGCATACTTCCATGCATAGACTTCAAATAAATCCACTTTTTTCCAATGATTGGAGAGAGTATTAAAGTAATCAGTAACAAATTGATAACCTCAGCAAAAATCATGAAGGATTGTTTATATCCTAAACAATTCTGAAGTGTTCTTCTTACTAGAGTATGTTTCCTTGAGATTTTCCTAAATTTGATGTGTTTTTCCATACAGAAGAAAATTTTCACTTATCTCATTGGTTGTGTAATTAATTAACTACAACATGACCATGTTATTTTATACTTTCCACTTCATGAATTCGGGATTAGTTGCTTTAGGCTGCACAATCTCTTTCGAGAAGTACTCATTCTTACCCTTGCCACATATGAACATCAAGACTGACTATGACCATGGGATATAACGTGACCATTCAATGTGTGACCCGTAATATGGGCAAATGATGATGAATCATATCCTCCTTGACCATTAGAGATTGGTTCGATTGATTTGGAAGAATACATACTCATGAAAAATCGGACAAAATGTAGTAGTGAAGAACTAGGTCAAAAAGAAAAAATTGCAGCAATTAGGCCGACAACAGTCTTCAGCTATAAGCAGTGACGATGTCAGAGGAGCCGGACATTAGTGATGGAGGAGTCAGCGTCGGAGGAGGGTGCTTCAGTCGCGAGTCGGTATCGAATGTGGGTGGTAGTCAGAAACAAGGACTATTGACCATTAACCTTCTGTGGTAGTTTGATTAGTTGGAAAAGCCTTTTGGCCTTTGCATGAACGGTTTTATTGGTAAATTTATAAAGGTTAATAGGAGGTGGTTGAATAAGTTATTGTAGCATATTTCTTGAATTTGAAAACAGATGTTAAAGCGGACATTAGTATCTCATTCCTTGGAAAACTGATTTCATCTAGATTAGGAACTTTATTGCTTTTTTAGCCTTTACAGTCATACAAAGATTGAAGATTCTATCATGGGTTGCTCCCAAACAAAGTTTCGATGGCTTGTTTCAGCTTACTTTACCTATAGTGCCTTCGTTGTTGGTTTGTCCAAAATGTTATAGTTCAATCCGGTGGCTGCTTTTGTTTGGAAATTATTATTATGTATTCCTTTTAAATTTTGAATATATATATAATCATTTTCTTAAAAATTGAGGTCTGAACTTGTGCTTGGTTCGGGATGGAGAAATGAAATACACAATAACTAAGAAATTTCAAGATCGGGACTAGATGTAGTGGCATAGATAATAAAATTATGTAATTATAGTTGAAGAAAATTCAAGATCGGTACTAGATGTAGAATAGATGATAAAGTTTATGTAGTTATAATTTAAAAAAATTGGTTGCAGTTTGGTTTTGATCTAGATGAAAGTAGATATGTACTAAAAATATGTAATAAGATTTATAAAATATGGAGTTGGGGTTACAGCTGAGATGTGGATGAAGACGTGAAATACATAATAATAATAATAGTTTCCTTTATAAAAAACACAAAAACGAAGGATTGAGGTTGGATTTGATGCTGGAATGGAGTTCATCGGGATGAGGTTTAGACAGTGGAATACATTATAAAAGTTTTAAGAATGGGGCCACAGTTGGGGAACAGAGAGAGAAAATGAGATGGGGGGAAGGGGGAGAAGATCTTCATTTAGTTGGTATCTGGTTTTAACTCTCATCATTTTCTCATTGGACATAAGTTATGTCTGCAATTTTGCAATAGAAGTTTTATTATTAATTTTTATCCCATCTTGTTAACATTGGAGTTCATTTTTGTTGCATCTTACATTCAGAAAAAAATTTATCAATTCATTTTTTCTTTTTCTTTCACAGATTTTAGCATTAGAATCTTAGGGAGAATATATATTTTAGCATTAGCAGTAAGTTCTAATGATTTTGACTTGGCTAACACTTTTTTTTTTTTTCTTTTGGTGCAGATCCTGCAGCCACTGCTGTCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCTTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTACTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTCTTCAGGTTAGGAGTTTGCTTTATATATATTTGTTTTGATACCTCTTTTGTTTCTCTAGCTGTATAATCTAGTTTGTTGTTGATCTTGCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTAATTGGCATCCGCAAAGCCAAGGTTAAATTCAAAATTTGCATAAACACATTGCTTCCTTAGTTTTTTATCTGAAATTATGATTCTGGTATATTAAATTGTAGTTGGGGCTTTTCAGTATTTGGTTAAACTGTGGAAATTAAACTCAGGATAGGTGGTTAATGGCCCGTCAACCTTTACTATTTTAGAAGGGATGAATTATGAATATTTTGATACCTTTTCTCACTGCACGCATATACAGGATTCTTTATGAGTTAAAATCTTCATTTGAGTTTTTGATTAGCTAATTACCATCAGCCTCCAGGTTTTGTCTCCCAACAATAAATGCTCCTATTCTTAACATTTTGAATTGAATTGGTACATCTTCCAATAATATTCTGGTTGGTTATGGAACAGACCATTTGGCTTGGCTTCATCTTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCTCAAAAGGCCTCATACCAATGGAGTTAGTATTCCTCACTTGTAAACCTATGATCATTCCCTAAATTAGCCGATGTGGGACTTTCATCATCCAACACCTCCCCTCGAACAAAGCACATGATCATTCCCTAAATTAGCCGATGTGGGACTTTCATCATCCAACACCTCCCCTCGAACAAAGCACGCCTCCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTTACTGCCTTCGTTCCTTCGAGGAGGCTTGACTCCTTTTTTCTTTTTGGAGTCCTTTGTTCGACATTCGACTGCCTTCGTTCCTTCGAGGAGGCTTGACTCCTTTTTTCTTTTTGGAGTCCTTTGTTCGACATTCGAGGATTTGCCAATCTCTTGGCACGGCTAAGTTTAGGGCATGGCTCTGATACCATGTTAGATGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCAAAAGGCCTCATACCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCATTCCCTAAATTAGCCGATGTGGGACTTTCATCATCCAACACATCTGTCTTCAAATAATATAAGAGGTGTTTCTTATCCGAAGAAAAAAAAAATGAATGATAGGATCTGTCTTTCGTGCTCAAATTGTCTGATTACTTCTACAAATCTCGTCCTCTTAAAGCTTCGTATATATTGACAGACTTACAAGATCTTCTATAATATTCTGATGTTAGAAACTTTGATCTTTTGTATGATGATTTCATTCTTTTAATTGTTTTCGGTTCATTTTGAGTCAGTTTGATGAAGGTTCTCTTATTTTTCTATCATTAGGTAATTTGTAATTTTCTAAAGAATGTTATTGTATTATCTTCGTGCTTCACAGTTTCCGGAGTTCATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTCGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGGTTAGTACATTTGGCGAATGCTTCTATCTGCTATTAGTTTCAACATATTTTGATAAGCTACACCATTTGAGGAAGAGATGTTGACTATTTAATAGATTTCTCGTCTGCTGACCAACTTTTAGGCATGAGACTGTGCCATCGTAATTGTGAGATTGTGGGTACTTGCTAACGTTATAGTCCTTAAAATAATCTATTTGGATGTAGTTAACGAGTACATGGGTGGCATGAAAAACGCAAGTTTTGCACTTCAGTCTCTTAACTGGTTTATTTTGTGTTGTGCTATTATAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCTGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAATTTCATGAAAAAAATTCTGGGTATTATAACCTTTGATCTCCACAATTCCGAGAACAATCAAATTCGGTATCAAGGGATGATGGTCGGACAAACTTGCATTTGCTGACATCTGAGTTTTGATAGGTTGCAGGAACTCACCATGCAATTTTCAATAACTCGTACGGGTTCCCTCTCTATTCCTCTTATCTATCGTAGGTGTGAAATGTTCTTGCTACGTGATGTCTGATTACAAAAAAATTGCTTAGCCTGGCCTGTAGGTATTAAGCTAAGTATTAAATTAAGTTGGCAGAGATGTTTAAGGAAGCAGATGTGCAGAATTCTCTTGTTCTGTGATTATCTGTATAAAAGTTGCATATTCTTACACAAGTTTTATTGGGGCACTATCAAGCAAGATGAACAATTCTGTTTTTTCTCTTGGTAAGTTATATTTTGTATGATTTATTGGTTGGTTTCATTTTTGGTTTTGAGAAG

mRNA sequence

ATGAGCGGCGGCCCCTCTGACAATGCCCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCTTGGCTTGTCCTATCAGGATGTGATTGTGAAGCTTCGCTTTTGCAAGTTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTCTTTACCTTGTTCTCTATTATAATCTCCCTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGATCCTGCAGCCACTGCTGTCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCTTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTACTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTCTTCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTAATTGGCATCCGCAAAGCCAAGTTTCCGGAGTTCATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTCGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCTGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAATTTCATGAAAAAAATTCTGGGTATTATAACCTTTGATCTCCACAATTCCGAGAACAATCAAATTCGGTATCAAGGGATGATGGTCGGACAAACTTGCATTTGCTGACATCTGAGTTTTGATAGGTTGCAGGAACTCACCATGCAATTTTCAATAACTCGTACGGGTTCCCTCTCTATTCCTCTTATCTATCGTAGGTGTGAAATGTTCTTGCTACGTGATGTCTGATTACAAAAAAATTGCTTAGCCTGGCCTGTAGGTATTAAGCTAAGTATTAAATTAAGTTGGCAGAGATGTTTAAGGAAGCAGATGTGCAGAATTCTCTTGTTCTGTGATTATCTGTATAAAAGTTGCATATTCTTACACAAGTTTTATTGGGGCACTATCAAGCAAGATGAACAATTCTGTTTTTTCTCTTGGTAAGTTATATTTTGTATGATTTATTGGTTGGTTTCATTTTTGGTTTTGAGAAG

Coding sequence (CDS)

ATGAGCGGCGGCCCCTCTGACAATGCCCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCTTGGCTTGTCCTATCAGGATGTGATTGTGAAGCTTCGCTTTTGCAAGTTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTCTTTACCTTGTTCTCTATTATAATCTCCCTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGATCCTGCAGCCACTGCTGTCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCTTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTACTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTCTTCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTAATTGGCATCCGCAAAGCCAAGTTTCCGGAGTTCATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTCGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCTGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAA

Protein sequence

MSGGPSDNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNLVTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH

Homology

[Close]

BLAST of CmaCh06G009240.1 vs. Swiss-Prot
Match: RBL20_ARATH (Rhomboid-like protein 20 OS=Arabidopsis thaliana GN=RBL20 PE=2 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.1e-112
Identity = 212/296 (71.62%), Postives = 247/296 (83.45%), Query Frame = 1


Query: 1   MSGGPSD--NAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS   NAPVT+ F+I SALFTVFFGIQ RS KLGLSYQD+  K R  KL+MS FAF
Sbjct: 1   MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS  +SLL EV+ +SLLKD   T  NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKD---TTANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASF+PF+ DIPVSTRFRV GV FSDKSFIYLAG+QLLLSSW+RSI PGIC
Sbjct: 121 LTSGPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGN-PPAAPNRDVRGNMPSFMSRQV 240
           GI+AGSLYRLN++GIRKAKFPEF++SFFSR   PS GN PP AP+R++ G +     R+ 
Sbjct: 181 GIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRA 240

Query: 241 ERNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           ER+   P+P++ EP E++I TLVSMGFDRN+ARQAL+ ARNDVN ATNILLE+QSH
Sbjct: 241 ERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]

BLAST of CmaCh06G009240.1 vs. Swiss-Prot
Match: RBL18_ARATH (Rhomboid-like protein 18 OS=Arabidopsis thaliana GN=RBL18 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.1e-100
Identity = 194/294 (65.99%), Postives = 232/294 (78.91%), Query Frame = 1


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVT+ F+IA+ALFTVFFGI+  S KLGLSYQD+  K R  KL++S FAF
Sbjct: 1   MNGGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SST +LL GL+LLY+FRVFERQIGSNKYSVF  FS  +SL+ E + +SL KDP A   NL
Sbjct: 61  SSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPTA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPY L+FASFVPFF DIPV+ RF VLGV FSDKSFIYLAG+QLLLSSW+RSI  GIC
Sbjct: 121 LTSGPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GI+AGSLYRLN+ GIRKAKFPEF++S FSRF LPS+ +    P R      P+   + V 
Sbjct: 181 GIIAGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQAVR 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
               P+P+ +EP E++IATLVSMGFD+N+ARQAL+ ARNDVN ATNILLE+ SH
Sbjct: 241 AYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

[Close]

BLAST of CmaCh06G009240.1 vs. Swiss-Prot
Match: UBAC2_CHICK (Ubiquitin-associated domain-containing protein 2 OS=Gallus gallus GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.4e-12
Identity = 60/225 (26.67%), Postives = 111/225 (49.33%), Query Frame = 1


Query: 9   APVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRF--CKLVMSVFAFSSTPELLF 68
           AP++++ ++  +  ++   +  +  +   +Y    +K  F   +LV          +   
Sbjct: 13  APLSKSLLLVPSAISILLTLLFQHYQKFFAYNLQAIKEDFQIWRLVCGRVICLDLKDTFC 72

Query: 69  GLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNLVTSGPYGL 128
              L+Y FR+FER+ GS K+S F L +  +S LF++L +   +      +N + SG  G 
Sbjct: 73  SSLLIYNFRIFERRYGSRKFSSFLLGAWTLSALFDLLLVEAAQYVFGITINSLPSGFLGP 132

Query: 129 LFASFVPFFFDIPVSTRFRVLG-VRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAGSL 188
           +FA FVPF+  IP     +VLG    ++K+ +Y+ GLQLL S     IL  + G+++G  
Sbjct: 133 VFALFVPFYCSIPRVQVTQVLGYFSITNKTLVYILGLQLLTSGSYIWIL-ALSGLISGIC 192

Query: 189 YRLNVIGIRKAK-FPEFISSFFSRFCLPSVGNPPAAPNRDVRGNM 230
           Y  +++ + +    P +++  FS    P   +  A P  ++R  M
Sbjct: 193 YNSSILKVHRILCVPSWVAKIFSWTLEPIFSS--AEPTNEIRVGM 234

[Close]

BLAST of CmaCh06G009240.1 vs. Swiss-Prot
Match: UBAC2_MACFA (Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.0e-10
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 1


Query: 70  LLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK-DPAATAVNLVTSGPYGLLF 129
           L+Y FR+FER+ GS K++ F L S ++S LF+ L +  ++     TA + + SG    +F
Sbjct: 76  LIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLVEAMQYFFGITAASNLPSGFLAPVF 135

Query: 130 ASFVPFFFDIPVSTRFRVLG-VRFSDKSFIYLAGLQLLLSS---WRRSILPGICGILAGS 189
           A FVPF+  IP     ++LG +  ++K+ IY+ GLQL  S    W    +  I G+++G 
Sbjct: 136 ALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----IVAISGLMSGL 195

Query: 190 LYRLNVIGIRKAK-FPEFISSFFS 208
            Y   +  + +    P +++ FFS
Sbjct: 196 CYNSKMFQVHQVLCIPSWMAKFFS 215

[Close]

BLAST of CmaCh06G009240.1 vs. Swiss-Prot
Match: UBAC2_HUMAN (Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens GN=UBAC2 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.9e-10
Identity = 49/144 (34.03%), Postives = 80/144 (55.56%), Query Frame = 1


Query: 70  LLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK-DPAATAVNLVTSGPYGLLF 129
           L+Y FR+FER+ GS K++ F L S ++S LF+ L I  ++     TA + + SG    +F
Sbjct: 76  LIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLIEAMQYFFGITAASNLPSGFLAPVF 135

Query: 130 ASFVPFFFDIPVSTRFRVLG-VRFSDKSFIYLAGLQLLLSS---WRRSILPGICGILAGS 189
           A FVPF+  IP     ++LG +  ++K+ IY+ GLQL  S    W    +  I G+++G 
Sbjct: 136 ALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----IVAISGLMSGL 195

Query: 190 LYRLNVIGIRKAK-FPEFISSFFS 208
            Y   +  + +    P +++ FFS
Sbjct: 196 CYDSKMFQVHQVLCIPSWMAKFFS 215

[Close]

BLAST of CmaCh06G009240.1 vs. TrEMBL
Match: A0A0A0LG81_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G840970 PE=4 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 9.9e-138
Identity = 264/294 (89.80%), Postives = 274/294 (93.20%), Query Frame = 1


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLR  KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSI  SLLFEVLAISLLKDPAA   NL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSR  LPS GNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RN+  VPTA+EP ED+IATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQ H
Sbjct: 241 RNYPSVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 291

[Close]

BLAST of CmaCh06G009240.1 vs. TrEMBL
Match: A0A061EVJ7_THECC (Ubiquitin-associated (UBA) protein isoform 1 OS=Theobroma cacao GN=TCM_024070 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.9e-117
Identity = 221/296 (74.66%), Postives = 255/296 (86.15%), Query Frame = 1


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTR F+IA ALFTVFFGIQ RS KLGLSYQD+  KL   KL++SVFAF
Sbjct: 1   MNGGPSGFNNAPVTRIFLIACALFTVFFGIQGRSFKLGLSYQDIFRKLSIWKLIVSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS+++S  FEV+A+++LKDP A   NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVMVSFFFEVMALAILKDPTA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASFVPF+FDIPVST FR+ GVRFSDKSFIYLAGLQLLLSSW+RS+LPGIC
Sbjct: 121 LTSGPYGLIFASFVPFYFDIPVSTWFRIFGVRFSDKSFIYLAGLQLLLSSWKRSLLPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV  IR+AKFPEF++SFFSR   PS GNPP A  R++ GN+PS+ +RQ E
Sbjct: 181 GILAGSLYRLNVFHIRRAKFPEFVTSFFSRLSWPSTGNPPTASARNLAGNVPSYTTRQAE 240

Query: 241 RNF--TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           R +  T  P+A EPPED IATLVSMGFDRNSARQAL+ ARNDVN ATNILLE+Q+H
Sbjct: 241 RTYPSTAAPSAIEPPEDCIATLVSMGFDRNSARQALVHARNDVNAATNILLEAQAH 293

[Close]

BLAST of CmaCh06G009240.1 vs. TrEMBL
Match: A0A0D2V7D6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G001400 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.5e-117
Identity = 220/296 (74.32%), Postives = 256/296 (86.49%), Query Frame = 1


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVT+TF+IASALFTVFFGIQ RS KLGLSYQD+  KL   KL+ SVFAF
Sbjct: 1   MNGGPSGFNNAPVTKTFVIASALFTVFFGIQGRSFKLGLSYQDIFTKLSIWKLITSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS++ S LFEV+A+++LKDP +   NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVMASFLFEVMAVAILKDPTS---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASFVPFFFDIPVST FR+ GVRFS+KSFIYLAGLQLLLSSW+RS+LPGIC
Sbjct: 121 LTSGPYGLIFASFVPFFFDIPVSTWFRIFGVRFSNKSFIYLAGLQLLLSSWKRSLLPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV  IRKAKFPEFI+SFFSR   PS+GNPP  P R++ GN+PS+ +RQVE
Sbjct: 181 GILAGSLYRLNVFRIRKAKFPEFITSFFSRLSWPSIGNPPTTPARNLAGNVPSYTTRQVE 240

Query: 241 RNFTPVPTAS--EPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           R +     +S  EP ED++ATLVSMGFD+NSARQAL+ ARND+N ATNILLE+QSH
Sbjct: 241 RTYPSAVASSAIEPSEDAVATLVSMGFDQNSARQALVHARNDINAATNILLEAQSH 293

[Close]

BLAST of CmaCh06G009240.1 vs. TrEMBL
Match: B9S843_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0692460 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 4.3e-117
Identity = 223/293 (76.11%), Postives = 252/293 (86.01%), Query Frame = 1


Query: 1   MSGGPSDNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAFSS 60
           M+GGPSDNAPVTRTF+IA A+FT+ FGIQ    KLGLSYQD+  KLR  KL+ SVFAFSS
Sbjct: 1   MNGGPSDNAPVTRTFVIACAIFTLSFGIQGGFRKLGLSYQDIFGKLRIWKLIASVFAFSS 60

Query: 61  TPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNLVT 120
           TPELLFGL+LLYYFRVFERQIGSNKYSVF LFSI ISL+FEVLA+ LLKDP A   NL+T
Sbjct: 61  TPELLFGLYLLYYFRVFERQIGSNKYSVFILFSIAISLVFEVLALGLLKDPTA---NLLT 120

Query: 121 SGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGI 180
           SGPYG++FASFVPFFFDIPVSTRFRV GVRFSDKSF+YLAGLQLLLSSW+RS+LPG+CGI
Sbjct: 121 SGPYGVIFASFVPFFFDIPVSTRFRVFGVRFSDKSFVYLAGLQLLLSSWKRSVLPGMCGI 180

Query: 181 LAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVERN 240
            AGSLYRLN++ IRKAKFPEFI+SFFSR   PS G+P  A  R + G+ PS+  R VER 
Sbjct: 181 FAGSLYRLNLLSIRKAKFPEFITSFFSRLAWPSSGSPRGATTRSIPGSAPSYPGRHVERT 240

Query: 241 FTPVP-TASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           + P+P   SEPPEDSIATLVSMGFDRNSARQAL++ARND+N ATNILLE+QSH
Sbjct: 241 Y-PIPMVPSEPPEDSIATLVSMGFDRNSARQALVQARNDINAATNILLEAQSH 289

[Close]

BLAST of CmaCh06G009240.1 vs. TrEMBL
Match: M5W2K1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008900mg PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 3.1e-115
Identity = 222/295 (75.25%), Postives = 254/295 (86.10%), Query Frame = 1


Query: 1   MSGGPSD--NAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS   NAPVTR F+IASALFTVFFG Q RS KLGLSY D+  K R  KL++S+FAF
Sbjct: 24  MNGGPSGFHNAPVTRAFVIASALFTVFFGFQGRSSKLGLSYLDIFGKFRLWKLIVSIFAF 83

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS+ +SLLFE+LA++ LKDPA   VNL
Sbjct: 84  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVTVSLLFEILALAYLKDPA---VNL 143

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGL+FASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSW+RSILPG+ 
Sbjct: 144 VTSGPYGLIFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWKRSILPGVF 203

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GIL GSLY LNV  IRKAKFPE I+SFFSR   PS G+PPAAP R++ G+   F +RQVE
Sbjct: 204 GILCGSLYHLNVFHIRKAKFPEVIASFFSRISWPSTGSPPAAPTRNIVGSATPFTARQVE 263

Query: 241 RNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RN+ + + +A+EP E SIATLVSMGFDRNSARQAL++ARNDVN+ATNILLE+Q+H
Sbjct: 264 RNYPSALASATEPTEASIATLVSMGFDRNSARQALVQARNDVNVATNILLEAQAH 315

[Close]

BLAST of CmaCh06G009240.1 vs. TAIR10
Match: AT3G56740.1 (AT3G56740.1 Ubiquitin-associated (UBA) protein)

HSP 1 Score: 406.8 bits (1044), Expect = 1.2e-113
Identity = 212/296 (71.62%), Postives = 247/296 (83.45%), Query Frame = 1


Query: 1   MSGGPSD--NAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS   NAPVT+ F+I SALFTVFFGIQ RS KLGLSYQD+  K R  KL+MS FAF
Sbjct: 1   MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS  +SLL EV+ +SLLKD   T  NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKD---TTANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASF+PF+ DIPVSTRFRV GV FSDKSFIYLAG+QLLLSSW+RSI PGIC
Sbjct: 121 LTSGPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGN-PPAAPNRDVRGNMPSFMSRQV 240
           GI+AGSLYRLN++GIRKAKFPEF++SFFSR   PS GN PP AP+R++ G +     R+ 
Sbjct: 181 GIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRA 240

Query: 241 ERNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           ER+   P+P++ EP E++I TLVSMGFDRN+ARQAL+ ARNDVN ATNILLE+QSH
Sbjct: 241 ERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]

BLAST of CmaCh06G009240.1 vs. TAIR10
Match: AT2G41160.1 (AT2G41160.1 Ubiquitin-associated (UBA) protein)

HSP 1 Score: 366.3 bits (939), Expect = 1.7e-101
Identity = 194/294 (65.99%), Postives = 232/294 (78.91%), Query Frame = 1


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVT+ F+IA+ALFTVFFGI+  S KLGLSYQD+  K R  KL++S FAF
Sbjct: 1   MNGGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SST +LL GL+LLY+FRVFERQIGSNKYSVF  FS  +SL+ E + +SL KDP A   NL
Sbjct: 61  SSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPTA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPY L+FASFVPFF DIPV+ RF VLGV FSDKSFIYLAG+QLLLSSW+RSI  GIC
Sbjct: 121 LTSGPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GI+AGSLYRLN+ GIRKAKFPEF++S FSRF LPS+ +    P R      P+   + V 
Sbjct: 181 GIIAGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQAVR 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
               P+P+ +EP E++IATLVSMGFD+N+ARQAL+ ARNDVN ATNILLE+ SH
Sbjct: 241 AYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

[Close]

BLAST of CmaCh06G009240.1 vs. NCBI nr
Match: gi|659129986|ref|XP_008464944.1| (PREDICTED: ubiquitin-associated domain-containing protein 2-like [Cucumis melo])

HSP 1 Score: 501.9 bits (1291), Expect = 7.5e-139
Identity = 265/294 (90.14%), Postives = 276/294 (93.88%), Query Frame = 1


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLRF KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSII SLLFEVLAISLLKDPAA   NL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSR  LPS GNPPAAPNRDVRGNMPSFMSR VE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RN+   P+A+EPPED+IATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQSH
Sbjct: 241 RNYPSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of CmaCh06G009240.1 vs. NCBI nr
Match: gi|449446724|ref|XP_004141121.1| (PREDICTED: ubiquitin-associated domain-containing protein 2 [Cucumis sativus])

HSP 1 Score: 497.7 bits (1280), Expect = 1.4e-137
Identity = 264/294 (89.80%), Postives = 274/294 (93.20%), Query Frame = 1


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLR  KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSI  SLLFEVLAISLLKDPAA   NL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSR  LPS GNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RN+  VPTA+EP ED+IATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQ H
Sbjct: 241 RNYPSVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 291

[Close]

BLAST of CmaCh06G009240.1 vs. NCBI nr
Match: gi|1009170782|ref|XP_015866381.1| (PREDICTED: rhomboid-like protein 20 [Ziziphus jujuba])

HSP 1 Score: 453.4 bits (1165), Expect = 3.1e-124
Identity = 234/294 (79.59%), Postives = 261/294 (88.78%), Query Frame = 1


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTF+IA ALFTVFFGIQ RS KLGLSY D+  KLR  KL+MSV AF
Sbjct: 1   MNGGPSGFNNAPVTRTFLIACALFTVFFGIQGRSSKLGLSYLDIFGKLRIWKLIMSVLAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS+ ++LLFEV A++LLKDPAA   NL
Sbjct: 61  SSTPELIFGLYLLYYFRVFERQIGSNKYSVFILFSLTVALLFEVFALALLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGL+FASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSW+RSILPG+C
Sbjct: 121 VTSGPYGLIFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWKRSILPGLC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLN+  IR+AKFPEF++SFFSR   PSVGNPPAAP R+V GN PS+   QVE
Sbjct: 181 GILAGSLYRLNLFRIRRAKFPEFVASFFSRLSWPSVGNPPAAPTRNVVGNAPSYTGHQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RN+  +PT++EPPEDSIATLVSMGFDRN+ARQAL+ ARNDVN ATNILLESQSH
Sbjct: 241 RNYPSMPTSTEPPEDSIATLVSMGFDRNAARQALVHARNDVNTATNILLESQSH 291

[Close]

BLAST of CmaCh06G009240.1 vs. NCBI nr
Match: gi|590634266|ref|XP_007028326.1| (Ubiquitin-associated (UBA) protein isoform 1 [Theobroma cacao])

HSP 1 Score: 430.3 bits (1105), Expect = 2.8e-117
Identity = 221/296 (74.66%), Postives = 255/296 (86.15%), Query Frame = 1


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTR F+IA ALFTVFFGIQ RS KLGLSYQD+  KL   KL++SVFAF
Sbjct: 1   MNGGPSGFNNAPVTRIFLIACALFTVFFGIQGRSFKLGLSYQDIFRKLSIWKLIVSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS+++S  FEV+A+++LKDP A   NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVMVSFFFEVMALAILKDPTA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASFVPF+FDIPVST FR+ GVRFSDKSFIYLAGLQLLLSSW+RS+LPGIC
Sbjct: 121 LTSGPYGLIFASFVPFYFDIPVSTWFRIFGVRFSDKSFIYLAGLQLLLSSWKRSLLPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV  IR+AKFPEF++SFFSR   PS GNPP A  R++ GN+PS+ +RQ E
Sbjct: 181 GILAGSLYRLNVFHIRRAKFPEFVTSFFSRLSWPSTGNPPTASARNLAGNVPSYTTRQAE 240

Query: 241 RNF--TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           R +  T  P+A EPPED IATLVSMGFDRNSARQAL+ ARNDVN ATNILLE+Q+H
Sbjct: 241 RTYPSTAAPSAIEPPEDCIATLVSMGFDRNSARQALVHARNDVNAATNILLEAQAH 293

[Close]

BLAST of CmaCh06G009240.1 vs. NCBI nr
Match: gi|823262613|ref|XP_012464055.1| (PREDICTED: ubiquitin-associated domain-containing protein 2-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 429.9 bits (1104), Expect = 3.6e-117
Identity = 220/296 (74.32%), Postives = 256/296 (86.49%), Query Frame = 1


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVT+TF+IASALFTVFFGIQ RS KLGLSYQD+  KL   KL+ SVFAF
Sbjct: 1   MNGGPSGFNNAPVTKTFVIASALFTVFFGIQGRSFKLGLSYQDIFTKLSIWKLITSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS++ S LFEV+A+++LKDP +   NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVMASFLFEVMAVAILKDPTS---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASFVPFFFDIPVST FR+ GVRFS+KSFIYLAGLQLLLSSW+RS+LPGIC
Sbjct: 121 LTSGPYGLIFASFVPFFFDIPVSTWFRIFGVRFSNKSFIYLAGLQLLLSSWKRSLLPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV  IRKAKFPEFI+SFFSR   PS+GNPP  P R++ GN+PS+ +RQVE
Sbjct: 181 GILAGSLYRLNVFRIRKAKFPEFITSFFSRLSWPSIGNPPTTPARNLAGNVPSYTTRQVE 240

Query: 241 RNFTPVPTAS--EPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           R +     +S  EP ED++ATLVSMGFD+NSARQAL+ ARND+N ATNILLE+QSH
Sbjct: 241 RTYPSAVASSAIEPSEDAVATLVSMGFDQNSARQALVHARNDINAATNILLEAQSH 293

The following BLAST results are available for this feature:

BLAST of CmaCh06G009240.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RBL20_ARATH	2.1e-112	71.62	Rhomboid-like protein 20 OS=Arabidopsis thaliana GN=RBL20 PE=2 SV=1	[more]
RBL18_ARATH	3.1e-100	65.99	Rhomboid-like protein 18 OS=Arabidopsis thaliana GN=RBL18 PE=2 SV=1	[more]
UBAC2_CHICK	1.4e-12	26.67	Ubiquitin-associated domain-containing protein 2 OS=Gallus gallus GN=UBAC2 PE=2 ...	[more]
UBAC2_MACFA	3.0e-10	33.33	Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis GN=UBAC2...	[more]
UBAC2_HUMAN	3.9e-10	34.03	Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens GN=UBAC2 PE=1 S...	[more]

BLAST of CmaCh06G009240.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG81_CUCSA	9.9e-138	89.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G840970 PE=4 SV=1	[more]
A0A061EVJ7_THECC	1.9e-117	74.66	Ubiquitin-associated (UBA) protein isoform 1 OS=Theobroma cacao GN=TCM_024070 PE...	[more]
A0A0D2V7D6_GOSRA	2.5e-117	74.32	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G001400 PE=4 SV=1	[more]
B9S843_RICCO	4.3e-117	76.11	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0692460 PE=4 SV=1	[more]
M5W2K1_PRUPE	3.1e-115	75.25	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008900mg PE=4 SV=1	[more]

BLAST of CmaCh06G009240.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56740.1	1.2e-113	71.62	Ubiquitin-associated (UBA) protein	[more]
AT2G41160.1	1.7e-101	65.99	Ubiquitin-associated (UBA) protein	[more]

BLAST of CmaCh06G009240.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659129986\|ref\|XP_008464944.1\|	7.5e-139	90.14	PREDICTED: ubiquitin-associated domain-containing protein 2-like [Cucumis melo]	[more]
gi\|449446724\|ref\|XP_004141121.1\|	1.4e-137	89.80	PREDICTED: ubiquitin-associated domain-containing protein 2 [Cucumis sativus]	[more]
gi\|1009170782\|ref\|XP_015866381.1\|	3.1e-124	79.59	PREDICTED: rhomboid-like protein 20 [Ziziphus jujuba]	[more]
gi\|590634266\|ref\|XP_007028326.1\|	2.8e-117	74.66	Ubiquitin-associated (UBA) protein isoform 1 [Theobroma cacao]	[more]
gi\|823262613\|ref\|XP_012464055.1\|	3.6e-117	74.32	PREDICTED: ubiquitin-associated domain-containing protein 2-like isoform X1 [Gos...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR009060	UBA-like_sf
IPR015940	UBA
IPR022764	Peptidase_S54_rhomboid_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh06G009240	CmaCh06G009240	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh06G009240.1	CmaCh06G009240.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G009240.1.three_prime_UTR.1	CmaCh06G009240.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G009240.1.CDS.8	CmaCh06G009240.1.CDS.8	CDS
CmaCh06G009240.1.CDS.7	CmaCh06G009240.1.CDS.7	CDS
CmaCh06G009240.1.CDS.6	CmaCh06G009240.1.CDS.6	CDS
CmaCh06G009240.1.CDS.5	CmaCh06G009240.1.CDS.5	CDS
CmaCh06G009240.1.CDS.4	CmaCh06G009240.1.CDS.4	CDS
CmaCh06G009240.1.CDS.3	CmaCh06G009240.1.CDS.3	CDS
CmaCh06G009240.1.CDS.2	CmaCh06G009240.1.CDS.2	CDS
CmaCh06G009240.1.CDS.1	CmaCh06G009240.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G009240.1.exon.8	CmaCh06G009240.1.exon.8	exon
CmaCh06G009240.1.exon.7	CmaCh06G009240.1.exon.7	exon
CmaCh06G009240.1.exon.6	CmaCh06G009240.1.exon.6	exon
CmaCh06G009240.1.exon.5	CmaCh06G009240.1.exon.5	exon
CmaCh06G009240.1.exon.4	CmaCh06G009240.1.exon.4	exon
CmaCh06G009240.1.exon.3	CmaCh06G009240.1.exon.3	exon
CmaCh06G009240.1.exon.2	CmaCh06G009240.1.exon.2	exon
CmaCh06G009240.1.exon.1	CmaCh06G009240.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009060	UBA-like	unknown	SSF46934	UBA-like	coord: 245..290 score: 7.66
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 251..286 score: 7.8
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 251..288 score: 2.6
IPR015940	Ubiquitin-associated domain	PROFILE	PS50030	UBA	coord: 249..289 score: 15
IPR022764	Peptidase S54, rhomboid domain	GENE3D	G3DSA:1.20.1540.10		coord: 10..185 score: 5.
None	No IPR available	GENE3D	G3DSA:1.10.8.10		coord: 245..289 score: 3.3
None	No IPR available	PANTHER	PTHR12917	ASPARTYL PROTEASE DDI-RELATED	coord: 1..289 score: 4.3E
None	No IPR available	PANTHER	PTHR12917:SF20	SUBFAMILY NOT NAMED	coord: 1..289 score: 4.3E
None	No IPR available	unknown	SSF144091	Rhomboid-like	coord: 7..187 score: 3.53