Carg22320 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22320
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ubiquitin-associated domain-containing protein 2
Location	Cucurbita_argyrosperma_scaffold_091 : 182840 .. 190950 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGATAGGCACTCCACTTCAAGCCCTATGCTGTATATTTCGACTCAATGTAATTTTTTTTTTTGTAGCATCTTTATAAATCCTGTCGGTTCTTTCCAACCCAAAATTTGAATCCAAACCTTTAGAAATGAATACTGAAACAAGGAGCTGCCTTTGTTCCTATATTGCTGTGGGTCTGTGAAGGATTTCTACAATAGAAGTTTTAGATGAATGCTCTTTTATTACTTGGTGGTTACGGGTTTAACTTGAAAGGGAAAGAAGTTGGAACTAGTTTACTTGCTTGTAAGATTGGAAATGGGAGGTTCTTTGTACAGGAACCAGTATTTTATGAAATTCTTTATAAGATTCTAATATAATGAAGTCGCAGAGGTAGGAAGTTTTTGTTTAAAAGTTTGGACGGGACATGAATTTGAATAAGCTGCGCTAAAGGGATCCACTGGTAGAAATATTATTTTTATCATTTTAACTGCTGCTATTCCATCTTTGTTGCATATATAATCCTATTATATCGGACTTAAAGTCGACTTATTTTATCCTTTTTCCATGATAGAGATTACCTTAATTTGTGTGGTAGAAAGGACACTTTTGACTAGTTAATTGTAATCCTTATGGCAGGATGTGATTGTGAAGCTTCGCTTTTGGAAGCTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTAAGTTTTATTCAATTCATACTGCAGGATTTTATTAAAACATGTCATAATGAAGCAACCAATCACGATCTTTAAATTGATGGGTCACATTAATATAATGCAGTGCCTGATTATTAACTCTTGTAACCATGTAGTTGTTTATCTTCAATGAATAGAAGCATAAAAAATCAGAAAGTGTATAAAAGTAGATGTAGTATAAGTTTTGTGGTCATACATGTGATGCCGTATTCATTAGGAATACTGAAAATGGTATTGAATTAATACTATGCCCCTTCTGATAACATACTAATCTTCCTAACATATCCATTACTTGTACTGACAACATTTTTGTGGTCATTGACGTGACAAAGTGGGCACCTATATTTGAAATAGTTTATTGTTTTTCATTTCAATTTGCTTCATAGAATAAGGTTAGCAGACTGAATTTAGTACGATCATTGCCTATAGTTTCTATTCTAGAAAACAGATACGTTTGGGTCAGGAAGTGTGAGTCATGCTTGCCTGCTAATATTGACGGCGATAATTTGTTAATTATAACATTCTTCACTCCAATTGTCAAACATATTATGTTGTAGTTTTTGTGCTCAAAACTCTTTTTCCCCCTTTAGTTGATGTGTATTTCTCCGTAAAGAGATTTATGTTAATATTCTGTCGTTTTGCAGGTCTTTACCTTGTTCTCTATAATAATCTCCCTTCTTTTTGAGGTCCTTGCAATATCATTACTTAAAGGTATGCATTTTGGTTTAATCTACTAATATGCTTGGGCAGCTAGCACAATTCAAGCTCATGTTTGATTATTGGTTTGATGTTGTTTAACATCCCTTTCTTTTTAAATTTTTAGAGGTGAACTCTCCTTCTTTCCCTTCTTTTTCTCCTGTAAAATTTGTTAACTTGGATTGGAAGTCCTTCCTGATCTTTCTGGCATTTTCGCTTGTAAGCCTTTGTATACCCATCTAGTTTCTTCTCTCTCTACTTATCTCTTCAGAAACCTTTGAAAGTTGATAATCCGAGTGAAATTCCATTTTTTTTTCCCTGATTGATGGCTTTAGGAAGAATTAACACCTTGGATTTTATCCAGAGAACCCATTACTTTGTCCTTGGCCCCAATTGGTGCTTTATGTGCAAGGGGCCTTGAGAAGATTTTTAACCGTTTGTTATGGCTTTGTTTGTTTGATTCTCTGTTGTGGAGTCAGTTTTGGCATATTTTTGGTTCCTACCTGAACATCTGTATGATGGTGGTGCGACATTTGATCCTCAATTTTGGGATAAAGACTTATTGCAAGCTTGCTTTTGTGTTGGTCTTTGAAGTATTTGGTTTGAAGGAAACAGGAGAGCCTTCATGGTTTTAGAACAGTTCCTTCCTAGACATCTTCTGACCATTCCTCTTAAGATATCCTAATTCTACGAGTCTTGAATCAAACAGCCACTTAAATTTGAGAGCTAGATGGAGATGGTGAGGTAGATCTTTGATTGTTATAGGAGTTTTTACAATCGGAGGGAGAGAAGGGCTAGGTTTTGTTTTTGTTTTGTTTGTTTTTATTTCAAGGGTTGAGTAGTCACTTAATCCTTCTATAATTTTTGGTATTTTCATTCATATCTCAACTATACAAAATATCATAATAAATACAAGGTACAGCAACTTATAAAAGAATGAATATTTTACCATAAACCAAATCTTAAACATACCTAGAAAAAAAAAATACAAAATAAAGATGAGATAAAATCCTAAAATACGAGAAACAAGGTTACCCTTAACTTTGACCATAATTTACAACACTCTCCCTCAAGGTGGATTGAATATATTATACAATCCCAACTTGCTATTCAAATCTTCAAGGTTAGGTCATGGTAAAAGCTTGGTAATCATATCTGCTAATTGCTGCTTGAGAATGGATGTGGACAAAGACACTACACTCAAAAACTCTAGGGACCAAATCAAGAGATTGAACACAAAGATGAGGAAATGATTGAAGACTTAATGAGGAGCAAGTATGTGGGATTGATCAATTGTGTGGAAATGAGATGACGATTCTTGCATTAAGCCACTCCATTTTGTTGATGAGTATCAACACAAATGCCAAGATGCAGAATTCCTTGAGTGATAGGTAATCCTCAAGACATGAACTAAAGAATTCTTTTGCATTGTCTATTGTGAGGACACAAAATTTGGTTTGATGTTGAGCTTTTGATCATATTAGGAAAATGTTTGAAATGTTGGTGAGCTTAAGATTTTTTTTCTTAACAAAGATCCATGTAACATAGATCATCAACAAAGGAAATAAGCTGTCGAGCCACAAAGATTTTTTTTTTGAAGGGTCCCATACATTGCTATCAATAAATGAAAAAGGACTTGACGGTTAATAAGCAATGTATGGATAGGGGTTTCAAGTATGCATGATAATCTGAAAAATTCCACAATTGAACAATGTAAGATTTTTATTATGAAGAAGATTTTGAAACAATTTGGAGAAATATGAAAAATTTGGATGACCTAACTGATAGTGTAATAACATCATTTCACGATCTTTATTGAAACAAGAAGAAAACTGATTACTGGACACAAAGGAAGATAAAAACTAAGAATTGTCTCCAATTGCTAGTGAGCCCTGATCATAGTTGAGAGTATGAAGTCTGAAAAAGTTCAGCACTGCCAATTGTCTTCTCCAGTTCGAATTCTGCAAAAATACGTTAGTTTGGATTAAACTTAATCGCACATTTAAGATCACGTGTCAATTTACTTATTGAAAGTAAATTACAACCCAAGTTTAGCATATGTTATACAGAGTTAAGATATAAATTTTGAGTAACTCTAATGGAACTTGTTCCAACCACTTTGGAGTTTGACCCATTTGCAATTTTCACAAGGAATTGGAGGTGCCGACTTGATAGTTTTGAAATAGTGATGCATTCCTTGTCATATGATGTGATGCTCCAGTGTCTACAATTCAATTCCTTCCTTTACTAGTTAACAAAGCAGGAGGTATAACTTCCTGTGCAGCCAGTATTGCTCCCTGGCCAATGATCTTTTGTTTTGCATCTATTTGTTATTTGCTAAATGGTGTTGACTTCGAATTGTTAGAATTATACGGAGCTACGTTAACCACATAGGCCCTACCATCATGATCATTGTGATGCCTAGGTTTCCAATTAGCAGGCTTCCCATGGATCTTTTAGCATGTGTCTTTTATATTACCCACCGTTTTGCAATTCTCACACCGAGGCCTCAATTGTTTTAGCTTTTTGTCACTTTGTACCATTGAGTTAAAACTACACTAGCAAGTACAAATGCTATCAAGAAAGTAGAGACTGATTCTGATTTGCCCATTATTGCACATTTCCTACATTCTTCTCGCCTTACTTCAGAGAAGGCTTTGCGAAGAGTTTGGCAATGACTTGGTTCCCATGTTTCGACCTCGAACTTCATCAAGATCGTTGATAAGGCCAAGAAGGAATTTGAGTGTCTCTTTTTCCTCAAGAATTTCTGTTTATTGAGTCGTATCATTGGTGGCATACTTCCATGAATAGACTTCAAATAAATCCACTTTTTTCCAATGATAGGAGTATTAAAGTAATCAGTAACAAATTGATAACCTCAGCAAAAATCATGAAGGATTGTTTCTATCCTAAACAATTCTGAAGTGTTCTTCTTACTAGAGTATGTTTCCTTGAGATTGTCCCAAATTTGATGTGTTGTTCCGTACAGAAGAAAATTTTCACTTATCTCATTGGTTGTGTAATTAATTAACAACGACATGACCATGTTATTTTCTACTTTCCACTTCATGAATTCGGGATTAGTTGCTTTAGGCTGCACAATCTCTTTCGAGAAGTACTCATTCTTACCCTTGCCACATATGAACATCAAGACTGACTATGACCATTGGATATAATGGGCCATTCAATGTGTGACCCATAATATGGGCAAATGATGATGAATCATATCCTCCTTGACCATTAGAGATTGGTTCGATTGATTTGGAAGAATACATACTCATGAAAAAATTGGACAAAATGTAGAAGTGAAGAACTAGGTCAAAAAGAAAAAATTGCAGCAATTAGGTCGGCAACAGTCTTTGGCGATAAGCAGTGACGATGTCAGAGGAGTCGAACGTTAGTGATGGAGGAGTCAGCGTCGGAGGAGGGTGCTTCAGTCGCGAGTTGGTATCGAATGTGGGTGGTAGTCATGAGAAGCTCACGATTTTTCTATTTGAGTGTTAAAGGGGAGGAGAACACTGCAAAGGGATCGTCAGAAACAAGGACTATTGACCATTAACCTTCTGTGGTAGTCTGATTAGTTGGAAAAGCCTTTTGGCCTTTGCATGAATGGTTTTATTGGTGAATTTATAAAGGTTAATAGGAGGTGGTTGAATAAGTTATTGTAGCATATTTCTTGAATTTGAAAACAGATGTTAAAGCTGACGTTAGCACCTCATTCCTTGGAAAACTGATTTCATCTAGATTAGGAACTTTATTGCTTTTTTAGCCTTTACAGTCATACAAAGATTGAATATTCTATCATGGGTTGCTCCCGAACAAAGTTTCGATGACTTGTTTCAGCTTATCTATAGTGCCTTCGTTGTTGGTTTGTCCAAAATGTTATAGTTCAATCCGGTGGCTGCTTTTGTTTGGAAATTATTATTATGTATTGAGTATATATATATATAATAAATTTTTAAAAAATTGAGGTCAAGGTTATGATTGAACTTGTGCTTGGTTCGGGATGGAGAGATGAAATACACAATAACTAAGAAATTTCAAGATCGGGACTAGATGTAATAGCATAGATAATAAAATTATGTAATTATAGTTGAAGAAAATTCAAGATCGGTACTAGATGTAGACTAGATAATAAAGTTTATGTAATTATAATTTAAAAAAATTGGTTGCAGTTTGGTTTTGATCTAGATGAAAGTAGATATGTACTAAAAATATGTAATAAGATTTATAAAATATGGAGTTGGGGCTACAGCTGAGATGTGGATGAAGACGTGAAATACATAATAAGAATAATAATTTCCTTTATAAAAAACATAAAAACGAAGGATTGAGGTTGGATTTGATGCTGGAATGGAGTTCATTGGGATGAGGTTTAGACAGTGGAATACATAATAAAAGTTTTAAGAATGAGGCCACAGTTGGGGAACTGAGAGAGAAAATGAGATGTGGGGAAGGGGGATAAGATCTTCATTTGGTTGGTATCTGGTTTTAACTCTCATCATTTTCTCATTGGACATAAGTTATGTCAGCAATTTTGCAATAGAAGCTTTATTATTGATTTTATCCCAACTTGTTAACATTGGAGTTCATTTTTGTTGCATCTTACATTCAGAAGAAATTTTATCAATTCATTTTTTCTTTTTCTTTCACAGATTTTAGCATTAGAATCTTAGGGAGAATATATATTTTAGCATTAGCAGTAAGTTCTAATGATTTTGACTTGGCTAACACTTTTCTTTTCTTTTTTTTCTTTTTTTGGGGGCAGATCCTGCAGCCACTGCTGCCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCCTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTCTTCAGGTTAGGAGTTTGCTTTATTTATATTTTTTTTCTGATACCTCTTTCGTTTCTCTAGCTGTATAATCTAGTTTGTTGTTGATCTTGCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTATTTGGCATCCGCAAAGCCAAGGTTAAATTCAAAATTTGCATAAACACATTGCTTCCTTCGTTTTCTATCTGAAATTATGATTCTGGTATATTAAATTGTAGTTGGGGCTTTTCAGTATTTGGTTAAACTGTGGAAATTAAACTCAGGATAGGTGATTTATAGCCCTTCAACCTTTACTAGTTTAGAAGGGATGAATTATGAATATTTTGATACCTTTTCTCTCTGCGGCACCATTTCACTGCATGCATATACAGGACTCTTTATGCAGAATTTGAGTTAAAATCTTCATTTGAGTTTTTGATTAGGTAATTACCATCAGCCTCCAGGTTGTCTCCCAACAATAATGCTCCTATTCTTAACATTTTGAATGGAATTGGTACACCTTAGATGCTTCCGACTTGCTCAAGGACCCAACTGCTCTAAAATTGTGTCTTATCTTCACTATTCTGGTTGGTTATGGACCAGACCATTTGGCTTGGCTTCATCTATCTTCAAATAATATAAGAGGCGTTTCATATGCGAAGAAAAAAAAAATGAATGATAGGATCTGTCTTTCGTGCTCAACTTGTCTGATTACTTCTACAAGTCTCGTCCTCTTAAAGCCTCGTATATATCGACAGACTTACAAGATCTTCTATAGTATTCTGATGTTAGAAACTTTGATCTTTTGTATGATGATTTCATTCTTTTAATTGTTTCTGTTAATTTTGAGTCAGTTTGATGAAGGTTCTCTTATTTTTCTATCATTAGGTAATTTGTAATTTTCTAAAGAATGTTATTGTATTATTTTCATGCTTCACAGTTTCCGGAGTTAATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTAGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGGTTAGTACATTTGGCGAATGCTTCTATCAGCTATTAGTTTCAACACATATTTTGATAAGCTACACCATTTGAGGAAGAGATTTTGACTATTTAATAGATTTCTCGTCTGCTGACCAACTTTTAGGCATGAGACTGTGCCATCGTAATTGTGAGATTGTGGGTACTTGCTAACGTTATAGTCCTTAAAATAATCTATTTGGATGTAGTTAACGAGTACATGGGTGGTGGCATGAAAAACGCAAGTTTTGCACTTCAGCCTCTTAACTGGTTTATTTTGTGTTGTGCTATTATAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCGGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAATTTCATGAAAAAAATTCTGGGTATTATGAAACCTTTGATCTCCACAATTCCGAGAACAATCAAATTCAGTATCAAGGGATGATGGTCGGACAAACTTGCATTTGCTGACATCTGAGTTTTGATAGGTTGCAGGAACTCACCATGCAATTTTCATTAACTCT

mRNA sequence

TAGGATAGGCACTCCACTTCAAGCCCTATGCTGTATATTTCGACTCAATGTAATTTTTTTTTTTGTAGCATCTTTATAAATCCTGTCGGTTCTTTCCAACCCAAAATTTGAATCCAAACCTTTAGAAATGAATACTGAAACAAGGAGCTGCCTTTGTTCCTATATTGCTGTGGGTCTGTGAAGGATTTCTACAATAGAAGTTTTAGATGAATGCTCTTTTATTACTTGGTGGTTACGGGTTTAACTTGAAAGGGAAAGAAGTTGGAACTAGTTTACTTGCTTGTAAGATTGGAAATGGGAGGTTCTTTGTACAGGAACCAGTATTTTATGAAATTCTTTATAAGATTCTAATATAATGAAGTCGCAGAGGTAGGAAGTTTTTGTTTAAAAGTTTGGACGGGACATGAATTTGAATAAGCTGCGCTAAAGGGATCCACTGGTAGAAATATTATTTTTATCATTTTAACTGCTGCTATTCCATCTTTGTTGCATATATAATCCTATTATATCGGACTTAAAGTCGACTTATTTTATCCTTTTTCCATGATAGAGATTACCTTAATTTGTGTGGTAGAAAGGACACTTTTGACTAGTTAATTGTAATCCTTATGGCAGGATGTGATTGTGAAGCTTCGCTTTTGGAAGCTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTCTTTACCTTGTTCTCTATAATAATCTCCCTTCTTTTTGAGGTCCTTGCAATATCATTACTTAAAGCCACTGCTGCCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCCTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTCTTCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTATTTGGCATCCGCAAAGCCAAGTTTCCGGAGTTAATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTAGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCGGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAATTTCATGAAAAAAATTCTGGGTATTATGAAACCTTTGATCTCCACAATTCCGAGAACAATCAAATTCAGTATCAAGGGATGATGGTCGGACAAACTTGCATTTGCTGACATCTGAGTTTTGATAGGTTGCAGGAACTCACCATGCAATTTTCATTAACTCT

Coding sequence (CDS)

ATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTCTTTACCTTGTTCTCTATAATAATCTCCCTTCTTTTTGAGGTCCTTGCAATATCATTACTTAAAGCCACTGCTGCCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCCTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTCTTCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTATTTGGCATCCGCAAAGCCAAGTTTCCGGAGTTAATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTAGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCGGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAA

Protein sequence

MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKATAANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH

Homology

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BLAST of Carg22320 vs. NCBI nr
Match: XP_022936013.1 (rhomboid-like protein 20 [Cucurbita moschata])

HSP 1 Score: 449.1 bits (1154), Expect = 9.1e-123
Identity = 236/240 (98.33%), Postives = 236/240 (98.33%), Query Frame = 0


Query: 1   MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK--- 60
           MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK   
Sbjct: 55  MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPA 114

Query: 61  ATAANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRS 120
           ATAANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRS
Sbjct: 115 ATAANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRS 174

Query: 121 ILPGICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPSF 180
           ILPGICGILAGSLYRLNVFGIRKAKFPE ISSFFSRFCLPSVGNPPAAPNRDVRGNMPSF
Sbjct: 175 ILPGICGILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSF 234

Query: 181 MSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
           MSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 235 MSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

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BLAST of Carg22320 vs. NCBI nr
Match: XP_023539609.1 (rhomboid-like protein 20 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 446.4 bits (1147), Expect = 5.9e-122
Identity = 234/240 (97.50%), Postives = 235/240 (97.92%), Query Frame = 0


Query: 1   MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK--- 60
           MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAI+LLK   
Sbjct: 55  MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAITLLKDPA 114

Query: 61  ATAANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRS 120
           ATAANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRS
Sbjct: 115 ATAANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRS 174

Query: 121 ILPGICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPSF 180
           ILPGICGILAGSLYRLNVFGIRKAKFPE ISSFFSRFCLPSVGNPP APNRDVRGNMPSF
Sbjct: 175 ILPGICGILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPGAPNRDVRGNMPSF 234

Query: 181 MSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
           MSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 235 MSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of Carg22320 vs. NCBI nr
Match: XP_022974301.1 (rhomboid-like protein 20 [Cucurbita maxima])

HSP 1 Score: 443.0 bits (1138), Expect = 6.5e-121
Identity = 233/240 (97.08%), Postives = 233/240 (97.08%), Query Frame = 0


Query: 1   MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK--- 60
           MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK   
Sbjct: 55  MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPA 114

Query: 61  ATAANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRS 120
           ATA NLVTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSWRRS
Sbjct: 115 ATAVNLVTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRS 174

Query: 121 ILPGICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPSF 180
           ILPGICGILAGSLYRLNV GIRKAKFPE ISSFFSRFCLPSVGNPPAAPNRDVRGNMPSF
Sbjct: 175 ILPGICGILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSF 234

Query: 181 MSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
           MSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 235 MSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of Carg22320 vs. NCBI nr
Match: XP_022154191.1 (rhomboid-like protein 20 [Momordica charantia])

HSP 1 Score: 418.7 bits (1075), Expect = 1.3e-113
Identity = 219/238 (92.02%), Postives = 226/238 (94.96%), Query Frame = 0


Query: 1   MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKATA 60
           MSVFAFSSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSI+ SLLFEVLAISLLK  A
Sbjct: 55  MSVFAFSSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIVTSLLFEVLAISLLKDPA 114

Query: 61  ANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP 120
            NLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP
Sbjct: 115 VNLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP 174

Query: 121 GICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGNPP-AAPNRDVRGNMPSFMS 180
           GICGILAGSLYRLNVFGIRKAKFPE ISSFFS+F LPSVGNPP AAPNRDVRGNMPSF  
Sbjct: 175 GICGILAGSLYRLNVFGIRKAKFPEFISSFFSQFSLPSVGNPPAAAPNRDVRGNMPSFTG 234

Query: 181 RQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
           RQVERN+  VPTA+EPPEDSIATLVSMGFDRNSARQAL+RARNDVNMATNILLE+QSH
Sbjct: 235 RQVERNYPTVPTATEPPEDSIATLVSMGFDRNSARQALVRARNDVNMATNILLEAQSH 292

[Close]

BLAST of Carg22320 vs. NCBI nr
Match: XP_023516629.1 (rhomboid-like protein 20 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.4 bits (1069), Expect = 6.6e-113
Identity = 216/236 (91.53%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 2   SVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKATAA 61
           SVFAFSSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSII SLLFEVLAISLLK  AA
Sbjct: 56  SVFAFSSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAA 115

Query: 62  NLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPG 121
           NLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPG
Sbjct: 116 NLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPG 175

Query: 122 ICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQ 181
           ICGILAGSLYRLNVFGIRKAKFPE +SSFFSRF LPS GNPPAAP RDVRGNMPSF+ RQ
Sbjct: 176 ICGILAGSLYRLNVFGIRKAKFPEFVSSFFSRFSLPSAGNPPAAPTRDVRGNMPSFVGRQ 235

Query: 182 VERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
           VER+  PVPTA+EPPEDSIATLVSMGFDRNSARQAL+ A NDVN+ATNILLESQSH
Sbjct: 236 VERSHPPVPTATEPPEDSIATLVSMGFDRNSARQALVHAGNDVNIATNILLESQSH 291

[Close]

BLAST of Carg22320 vs. TAIR10
Match: AT3G56740.1 (Ubiquitin-associated (UBA) protein)

HSP 1 Score: 340.9 bits (873), Expect = 6.4e-94
Identity = 175/239 (73.22%), Postives = 204/239 (85.36%), Query Frame = 0


Query: 1   MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKATA 60
           MS FAFSSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS  +SLL EV+ +SLLK T 
Sbjct: 55  MSTFAFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKDTT 114

Query: 61  ANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP 120
           ANL+TSGPYGL+FASF+PF+ DIPVSTRFRVFGV FSDKSFIYLAG+QLLLSSW+RSI P
Sbjct: 115 ANLLTSGPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFP 174

Query: 121 GICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGN-PPAAPNRDVRGNMPSFMS 180
           GICGI+AGSLYRLN+ GIRKAKFPE ++SFFSR   PS GN PP AP+R++ G +     
Sbjct: 175 GICGIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTG 234

Query: 181 RQVERNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
           R+ ER+   P+P++ EP E++I TLVSMGFDRN+ARQAL+ ARNDVN ATNILLE+QSH
Sbjct: 235 RRAERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]

BLAST of Carg22320 vs. TAIR10
Match: AT2G41160.1 (Ubiquitin-associated (UBA) protein)

HSP 1 Score: 297.7 bits (761), Expect = 6.2e-81
Identity = 156/237 (65.82%), Postives = 186/237 (78.48%), Query Frame = 0


Query: 1   MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKATA 60
           +S FAFSST +LL GL+LLY+FRVFERQIGSNKYSVF  FS  +SL+ E + +SL K   
Sbjct: 55  ISAFAFSSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPT 114

Query: 61  ANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP 120
           ANL+TSGPY L+FASFVPFF DIPV+ RF V GV FSDKSFIYLAG+QLLLSSW+RSI  
Sbjct: 115 ANLLTSGPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFT 174

Query: 121 GICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSR 180
           GICGI+AGSLYRLN+FGIRKAKFPE ++S FSRF LPS+ +    P R      P+   +
Sbjct: 175 GICGIIAGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQ 234

Query: 181 QVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
            V     P+P+ +EP E++IATLVSMGFD+N+ARQAL+ ARNDVN ATNILLE+ SH
Sbjct: 235 AVRAYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

[Close]

BLAST of Carg22320 vs. Swiss-Prot
Match: sp|Q9LET3|RBL20_ARATH (Rhomboid-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=RBL20 PE=2 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.1e-92
Identity = 175/239 (73.22%), Postives = 204/239 (85.36%), Query Frame = 0


Query: 1   MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKATA 60
           MS FAFSSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS  +SLL EV+ +SLLK T 
Sbjct: 55  MSTFAFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKDTT 114

Query: 61  ANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP 120
           ANL+TSGPYGL+FASF+PF+ DIPVSTRFRVFGV FSDKSFIYLAG+QLLLSSW+RSI P
Sbjct: 115 ANLLTSGPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFP 174

Query: 121 GICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGN-PPAAPNRDVRGNMPSFMS 180
           GICGI+AGSLYRLN+ GIRKAKFPE ++SFFSR   PS GN PP AP+R++ G +     
Sbjct: 175 GICGIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTG 234

Query: 181 RQVERNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
           R+ ER+   P+P++ EP E++I TLVSMGFDRN+ARQAL+ ARNDVN ATNILLE+QSH
Sbjct: 235 RRAERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]

BLAST of Carg22320 vs. Swiss-Prot
Match: sp|Q8RXQ2|RBL18_ARATH (Rhomboid-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RBL18 PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.1e-79
Identity = 156/237 (65.82%), Postives = 186/237 (78.48%), Query Frame = 0


Query: 1   MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKATA 60
           +S FAFSST +LL GL+LLY+FRVFERQIGSNKYSVF  FS  +SL+ E + +SL K   
Sbjct: 55  ISAFAFSSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPT 114

Query: 61  ANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP 120
           ANL+TSGPY L+FASFVPFF DIPV+ RF V GV FSDKSFIYLAG+QLLLSSW+RSI  
Sbjct: 115 ANLLTSGPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFT 174

Query: 121 GICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSR 180
           GICGI+AGSLYRLN+FGIRKAKFPE ++S FSRF LPS+ +    P R      P+   +
Sbjct: 175 GICGIIAGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQ 234

Query: 181 QVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
            V     P+P+ +EP E++IATLVSMGFD+N+ARQAL+ ARNDVN ATNILLE+ SH
Sbjct: 235 AVRAYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

[Close]

BLAST of Carg22320 vs. Swiss-Prot
Match: sp|Q4R910|UBAC2_MACFA (Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis OX=9541 GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-15
Identity = 78/275 (28.36%), Postives = 124/275 (45.09%), Query Frame = 0


Query: 18  LLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK----ATAANLVTSGPYGLLF 77
           L+Y FR+FER+ GS K++ F L S ++S LF+ L +  ++     TAA+ + SG    +F
Sbjct: 76  LIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLVEAMQYFFGITAASNLPSGFLAPVF 135

Query: 78  ASFVPFFFDIPVSTRFRVFG-VRFSDKSFIYLAGLQLLLSS---WRRSILPGICGILAGS 137
           A FVPF+  IP     ++ G +  ++K+ IY+ GLQL  S    W    +  I G+++G 
Sbjct: 136 ALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----IVAISGLMSGL 195

Query: 138 LYRLNVFGIRKAK-FPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPS-----------F 197
            Y   +F + +    P  ++ FFS    P   +  + P  + R  M +            
Sbjct: 196 CYNSKMFQVHQVLCIPSWMAKFFSWTLEPIFSS--SEPTSEARIGMGATLDIQRQQRMEL 255

Query: 198 MSRQV---------------------ERNFTPV------------------PTASEPPED 234
           + RQ+                      R F P+                  P   E  E+
Sbjct: 256 LDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAAPPPLEVSEE 315

[Close]

BLAST of Carg22320 vs. Swiss-Prot
Match: sp|Q8NBM4|UBAC2_HUMAN (Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBAC2 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.3e-15
Identity = 78/272 (28.68%), Postives = 122/272 (44.85%), Query Frame = 0


Query: 18  LLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK----ATAANLVTSGPYGLLF 77
           L+Y FR+FER+ GS K++ F L S ++S LF+ L I  ++     TAA+ + SG    +F
Sbjct: 76  LIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLIEAMQYFFGITAASNLPSGFLAPVF 135

Query: 78  ASFVPFFFDIPVSTRFRVFG-VRFSDKSFIYLAGLQLLLSS---WRRSILPGICGILAGS 137
           A FVPF+  IP     ++ G +  ++K+ IY+ GLQL  S    W    +  I G+++G 
Sbjct: 136 ALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----IVAISGLMSGL 195

Query: 138 LYRLNVFGIRKAK-FPELISSFFSRFCLP--SVGNPPAAP-------------------- 197
            Y   +F + +    P  ++ FFS    P  S   P +                      
Sbjct: 196 CYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATLDIQRQQRMELLD 255

Query: 198 -------------NRDVRGNMPSF------------MSRQVERNFTPVPTASEPPEDSIA 234
                         R  +G M ++            ++ Q  R   P     E  E+ +A
Sbjct: 256 RQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAAPPLEVSEEQVA 315

[Close]

BLAST of Carg22320 vs. Swiss-Prot
Match: sp|Q8R1K1|UBAC2_MOUSE (Ubiquitin-associated domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ubac2 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.1e-13
Identity = 76/275 (27.64%), Postives = 122/275 (44.36%), Query Frame = 0


Query: 18  LLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISL----LKATAANLVTSGPYGLLF 77
           L+Y FR+FER+ GS K++ F L S ++S LF+ + +      L  T A+ + SG    +F
Sbjct: 76  LIYNFRIFERRYGSRKFASFLLGSWVLSALFDFILVEAVQYSLGVTVASNLPSGFLAPVF 135

Query: 78  ASFVPFFFDIPVSTRFRVFG-VRFSDKSFIYLAGLQLLLSS---WRRSILPGICGILAGS 137
           A FVPF   IP     ++ G +  ++K+ IY+ GLQL  S    W    +  + G+++G 
Sbjct: 136 ALFVPFHCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----IVAMSGLISGM 195

Query: 138 LYRLNVFGIRKA-KFPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMS--------- 197
            Y   V  + +  + P  ++ FFS    P   +  + P  + R  M + +          
Sbjct: 196 CYDRKVLQVHQVLRIPGRMAEFFSWALEPIFSS--SEPTSEARVGMGATVDIQRQQRMEQ 255

Query: 198 ----------RQVER------------------------NFTPVPTASE---PP----ED 234
                      QV R                        N+   P + +   PP    E+
Sbjct: 256 LDRQLMLSQFAQVRRQRQQQGGMINWNRLFPPLRQRRNINYQDGPRSEQRASPPLEVSEE 315

[Close]

BLAST of Carg22320 vs. TrEMBL
Match: tr|A0A1S3CMQ9|A0A1S3CMQ9_CUCME (rhomboid-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103502692 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.7e-104
Identity = 205/237 (86.50%), Postives = 212/237 (89.45%), Query Frame = 0


Query: 1   MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKATA 60
           MSVFAFSSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSII SLLFEVLAISLLK  A
Sbjct: 55  MSVFAFSSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPA 114

Query: 61  ANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP 120
           ANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP
Sbjct: 115 ANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP 174

Query: 121 GICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSR 180
           GICGILAGSLYRLNVFGIRKAKFPE ISSFFSR  LPS GNPPAAPNRDVRG        
Sbjct: 175 GICGILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGXXXXXXXX 234

Query: 181 QVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
                    P+A+EPPED+IATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQSH
Sbjct: 235 XXXXXXXXAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of Carg22320 vs. TrEMBL
Match: tr|A0A0A0LG81|A0A0A0LG81_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G840970 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 2.0e-102
Identity = 203/237 (85.65%), Postives = 209/237 (88.19%), Query Frame = 0


Query: 1   MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKATA 60
           MSVFAFSSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSI  SLLFEVLAISLLK  A
Sbjct: 55  MSVFAFSSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPA 114

Query: 61  ANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP 120
           ANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP
Sbjct: 115 ANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP 174

Query: 121 GICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSR 180
           GICGILAGSLYRLNVFGIRKAKFPE ISSFFSR  LPS GNPPAAPNRDVR         
Sbjct: 175 GICGILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRXXXXXXXXX 234

Query: 181 QVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
                   VPTA+EP ED+IATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQ H
Sbjct: 235 XXXXXXXXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 291

[Close]

BLAST of Carg22320 vs. TrEMBL
Match: tr|A0A2P4I7W2|A0A2P4I7W2_QUESU (Rhomboid-like protein 20 OS=Quercus suber OX=58331 GN=CFP56_18872 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 6.5e-101
Identity = 193/237 (81.43%), Postives = 216/237 (91.14%), Query Frame = 0


Query: 2   SVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKATAA 61
           SVFAFSSTPELLFGL+LLYYFRVFERQIGSNKYSVF LFS+I SLLFEVLA++LLK  A 
Sbjct: 56  SVFAFSSTPELLFGLYLLYYFRVFERQIGSNKYSVFILFSVIASLLFEVLALALLKDPAV 115

Query: 62  NLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPG 121
           NLVTSGPYGL+FASFVPFF DIPVST FRVFGVRFSDKSFIYLAGLQLLLSSW+RSILPG
Sbjct: 116 NLVTSGPYGLIFASFVPFFLDIPVSTWFRVFGVRFSDKSFIYLAGLQLLLSSWKRSILPG 175

Query: 122 ICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQ 181
           ICGILAGSLYRLNVF IRKAKFPE ++SFFSR   P+ G+PP+AP R++ GN+PS+  RQ
Sbjct: 176 ICGILAGSLYRLNVFRIRKAKFPEFVTSFFSRLPWPTTGSPPSAPTRNIVGNVPSYAGRQ 235

Query: 182 VERNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
           VERN+ + +P+A EPPEDSIATLVSMGFDRNSARQAL+ ARND+N+ATNILLE+QSH
Sbjct: 236 VERNYPSSMPSAIEPPEDSIATLVSMGFDRNSARQALVHARNDINVATNILLEAQSH 292

[Close]

BLAST of Carg22320 vs. TrEMBL
Match: tr|A0A2P6RTM5|A0A2P6RTM5_ROSCH (Putative peptidase S54, rhomboid domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0125741 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 3.3e-97
Identity = 186/238 (78.15%), Postives = 214/238 (89.92%), Query Frame = 0


Query: 1   MSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKATA 60
           +SVFAFSSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS+  SLLFE+LAI+ LK  A
Sbjct: 55  VSVFAFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVTASLLFEILAIAFLKDPA 114

Query: 61  ANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILP 120
            NLVTSGPYGL+FASFVPFFFDIPVSTRFRVFGV FSDKSFIYLAGLQLLLSSW+RS+LP
Sbjct: 115 VNLVTSGPYGLIFASFVPFFFDIPVSTRFRVFGVHFSDKSFIYLAGLQLLLSSWKRSVLP 174

Query: 121 GICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSR 180
           GICGIL GSLY LNVF IRKAKFPE+I+SFFSR  LP++G+ PAAP R++ G++PSF ++
Sbjct: 175 GICGILCGSLYHLNVFCIRKAKFPEVIASFFSRLSLPTMGSLPAAPTRNIAGSVPSFTAQ 234

Query: 181 QVERNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
           QVERN+ +P+ + +EP EDSIATLVSMGFDRNSARQAL+ ARNDV  ATNILLE+Q+H
Sbjct: 235 QVERNYPSPMLSTTEPTEDSIATLVSMGFDRNSARQALVHARNDVTAATNILLEAQAH 292

[Close]

BLAST of Carg22320 vs. TrEMBL
Match: tr|A0A067JZ75|A0A067JZ75_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16635 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 3.3e-97
Identity = 184/237 (77.64%), Postives = 211/237 (89.03%), Query Frame = 0


Query: 2   SVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKATAA 61
           SVFAFSSTPELLFGL+LLYYFRVFERQIGSNKYSVF  FSI+ISLLFEVLA+ LL+    
Sbjct: 56  SVFAFSSTPELLFGLYLLYYFRVFERQIGSNKYSVFIFFSIVISLLFEVLALGLLRDLTP 115

Query: 62  NLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPG 121
           NL+TSGPYG++FASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAG+QLLLSSW+RS+LPG
Sbjct: 116 NLLTSGPYGVIFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWKRSLLPG 175

Query: 122 ICGILAGSLYRLNVFGIRKAKFPELISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQ 181
           +CGI AGSLYRLN+FGIRKAKFPE I+SFFSR   PS G+P  +  R++ G+MPS+  RQ
Sbjct: 176 MCGIFAGSLYRLNIFGIRKAKFPEFITSFFSRLSWPSTGSPRGSTTRNIVGSMPSYTGRQ 235

Query: 182 VERNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 238
           VERN+  P+  + EPPE+SIATLVSMGFDRN+ARQAL++ARND+N ATNILLESQSH
Sbjct: 236 VERNYPAPMVPSVEPPEESIATLVSMGFDRNAARQALVQARNDINAATNILLESQSH 292

The following BLAST results are available for this feature:

BLAST of Carg22320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936013.1	9.1e-123	98.33	rhomboid-like protein 20 [Cucurbita moschata]	[more]
XP_023539609.1	5.9e-122	97.50	rhomboid-like protein 20 [Cucurbita pepo subsp. pepo]	[more]
XP_022974301.1	6.5e-121	97.08	rhomboid-like protein 20 [Cucurbita maxima]	[more]
XP_022154191.1	1.3e-113	92.02	rhomboid-like protein 20 [Momordica charantia]	[more]
XP_023516629.1	6.6e-113	91.53	rhomboid-like protein 20 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg22320 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56740.1	6.4e-94	73.22	Ubiquitin-associated (UBA) protein	[more]
AT2G41160.1	6.2e-81	65.82	Ubiquitin-associated (UBA) protein	[more]

BLAST of Carg22320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LET3\|RBL20_ARATH	1.1e-92	73.22	Rhomboid-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=RBL20 PE=2 SV=1	[more]
sp\|Q8RXQ2\|RBL18_ARATH	1.1e-79	65.82	Rhomboid-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RBL18 PE=2 SV=1	[more]
sp\|Q4R910\|UBAC2_MACFA	1.9e-15	28.36	Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis OX=9541 ...	[more]
sp\|Q8NBM4\|UBAC2_HUMAN	4.3e-15	28.68	Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBAC...	[more]
sp\|Q8R1K1\|UBAC2_MOUSE	3.1e-13	27.64	Ubiquitin-associated domain-containing protein 2 OS=Mus musculus OX=10090 GN=Uba...	[more]

BLAST of Carg22320 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CMQ9\|A0A1S3CMQ9_CUCME	1.7e-104	86.50	rhomboid-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103502692 PE=4 SV=1	[more]
tr\|A0A0A0LG81\|A0A0A0LG81_CUCSA	2.0e-102	85.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G840970 PE=4 SV=1	[more]
tr\|A0A2P4I7W2\|A0A2P4I7W2_QUESU	6.5e-101	81.43	Rhomboid-like protein 20 OS=Quercus suber OX=58331 GN=CFP56_18872 PE=4 SV=1	[more]
tr\|A0A2P6RTM5\|A0A2P6RTM5_ROSCH	3.3e-97	78.15	Putative peptidase S54, rhomboid domain-containing protein OS=Rosa chinensis OX=...	[more]
tr\|A0A067JZ75\|A0A067JZ75_JATCU	3.3e-97	77.64	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16635 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009060	UBA-like_sf
IPR015940	UBA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22320-RA	Carg22320-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 196..233 e-value: 2.6E-10 score: 50.3
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 196..231 e-value: 5.9E-12 score: 45.2
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 194..234 score: 15.029
None	No IPR available	GENE3D	G3DSA:1.10.8.10		coord: 190..237 e-value: 3.4E-13 score: 50.9
None	No IPR available	PANTHER	PTHR44474	FAMILY NOT NAMED	coord: 2..234
None	No IPR available	SUPERFAMILY	SSF144091	Rhomboid-like	coord: 2..136
IPR009060	UBA-like superfamily	SUPERFAMILY	SSF46934	UBA-like	coord: 190..235

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22320	CmaCh06G009240	Cucurbita maxima (Rimu)	carcmaB0820
Carg22320	CmoCh06G009420	Cucurbita moschata (Rifu)	carcmoB0799
Carg22320	Cp4.1LG08g00020	Cucurbita pepo (Zucchini)	carcpeB0835

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None