CmaCh05G008950 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh05G008950
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCell division topological specificity factor-like protein
LocationCma_Chr05 : 6939289 .. 6943235 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGTGCTCACTGAAAGCCGAGAGTGGGTGGCTTCTGTGCACACCAGCGACAACGGCGCTCATCTGAAGGGAAACGAACACACACAATCGACAGCCCATACGCAAATGGCGGTTTCTGGAGATCTCAGAGTCTCCGCGACACTCTGCTCTCACCATCCTCACCCTCATCGGACTTCTTTTCCCTCTTCAAAGGTCCATTTTCTCTTCTCTTTCGATCTCTCTTACTTCGTTTGCTTCATTGTTTAACGAAGCGTCGGAAATTTTCTCTGAATGTGGAATCTGGTGGCTCAAAGATATGAATTCTTTGATTCTTTGTGTGAATTTTTTCTTGCCTGTTTCTCCAATGGAGCGTTTATGAAATGGAGGCGCTGTCAACCCTAGCTCTGCACTTCGTTCTTTTTGTATTACTATTATTATTTATCGGATTCCTGAATTGTGTTCCAGATTTCTAGGGTTTTACGTGAATTCTAGCATCTTTTTTTTCCCTTCATTATGTACGACAATCGCTTGTGGCGGCGTTTGGTTGGAACTTCTTTAGATCTTTTGACAGGAATTCTCTCTGCCTGGCCCATAGGCTGTTGTTTTGTGCAATCTTTATTGAATATATTCCTCGTGATCTTATTAAAATCAATGTTGTGAGACCCACCATGTAAATCTAGATTTAGGGTATAGTGAAGAATGTGATGTACCTTAAACAGTTGGGAGAGAAGTTCATTTCTATTTCCATCTTCTATCATTGTTCAAATGTAAATCTTTGTTAGGTTTATACCACATCGAAAGGAAAATCATAGAGATTCTAGTCTAAGGAAAACTCCAAGAGCTCACCTTCACAGATCATACATTTCAGAATGATTCTTATTCTGTAATTGAACCGACTAATTCGTTTGAAGCTATTCTGAATTTTGATTTGGAAACAACTGGATATGCTTTGTTGCTTATTGTAGCATTTGTGCTTCATCCTAGGTTGAATTCTCTGGCTTTTCAAGTGGAGGGCTTATCAGTCATGATGTTGCTCTGAAATGGCATAACATGGCAATCGATAGTCGTAATAGGCGTGGCATTTCACAGATAACTACTCGGAGCTCAGAAAGTTATGAAATGTCGTCGAAAACATCAAGCCAAGAAGCCGAAACCTTCCTTCTGAATGCCATAAACATGAACTTCTTTGAGCGGTTGAACTTAGCTTGGAGAATTTTATTTCCTACCCCAACATCGAAGAGAAATTCGAACGCCCTGATCGCCAAACAGCGACTAAAGATGATCCTCTTTGCTGACCGATGTGCAGTTAGCGATGAGGCTAAACGAAAGATCGTTAGTAACATAGTGCAAGCGCTATCAGATTTCGTAGAAATTGAATCGAAGGATAAAGTTGAGTTGAGCATGTCAACGGATTCTGATCTTGGAACCATTTACTCTGTCACGGTACCTGTGAGAAGGGTGAAAGCAGAATATCAAGAAGCAGACGAGAGTGCAACGATAACGAACATCGAGTACAAAGATAACGGAGAGACGACTGGTTCTGTTGATGTGAGGTTTGATTTCTTCATTCCAGATTGAATGCATCTATGGTTTCCTATGGGTGAAATTGATAAATAATTTGTATTTGAACAGTGGCAGTAGCCAAAAAGCTTTGTTCTTCTGTATATAAATTGGATGGATTTCTGTCCGGCAATGAGGATTGTGGTTTCAATTGAGATTGTAGCTGGATTTAGTGTTTACCTTATATTGCTGTGGTTATTTCTGTGTAGAAATAGAAGCCACCAAATCATCTGTTATTCTTTTAGCTACCTTCTATACCTTCTATGTTTCATGTTTGGATCGTGTGCATTACTCAATTAGTTAATATATATAATATAATTCACTATAAAAATGTCGAAGATTCGAAACTCATCTTCATATAATGTTGAATTCTAATTTTAAGAGGCTCGATAAATTGGGGTTTAAATTACAAATGATTCTCGTAATGATAATGACTATTCTTTAACTGTACGGTGGCTCTTTGGGAGATTCAAAAGTTTGCTTCTACAGGTTGTTTAAGTTAAAAAAGAATTGGAATGTAGGAGAGGTACAAGATTGATGTCTCTTTTATAATCAAAATTGTAACGACTCTAGATTTCTACTTACCTAGAGTTATTGTTGTCGTCATTAACATAATCATTTTTGTGTAGAAATAAGCATTGAAAACATCATCATAAAACACTGTCATGGACTTACGTGTTTGAAAATATCTTTAAAACAACATAATGAAATGCTAAATGAAATAAATATACATTATAAGTAAAACCCTAATCTAACCTGAGTCCAAAGAAATAAATACAATTACCCTATGCATGGGTCATGGTATCGAATTGCGATGTTGTCGTCAGCCGTACAGAGATGTCTTGCCTTTACTTGAAATAGAGAAGTACCACGTGACTTAAATATTTTAAGAAATACTTAGTATTTGACTCCACTATTTGGGTTAAATGCAAACAAATACAATACTGAGTGGGACCTATCATATTAGTCTATATTTCCTTGGGCGGTTATCCTAAATGGGTTAATTGAATGTGTATTTATTGTTCTACACATGGTCCATATGTGTGAATGTGGACCCATCAGTGTGAGTTCGCACACCTCCTAGGCCCCTTTCATAGTTGGGCGAGCACTCTCTAAGAGTTGTTGATGCCGGACATTCTTTAGGAGCTAATGATTGTTTTCCTGCCTCGTAATGTACGTGTCTGTTCCATCATGAAATAGGGGTATTTTCCCTGATGTATGAACACACAATGATGCATGAGATCCCAACCCTTTTATTCATTATCATGTAAGACAATCCCTCCCATTTTCCTTCATATCATATCATTTTCATCATAGGTTTCCATGCATAAATCGGGGTTGTGCATCATATCGACACATCTTATCTTATATCAATCATATCGTGCATCGTGTCATATCATGCATTGTGTAATATCGTGTCATATCATGCATATCTCATATCATCAACATATAATGTAACATCATATATTATATCACCACACGTATTACAACATAACATTATCATATCATTAGTACATCACATTATAACATGTGTCATAACATTCACATATCATCTCATAGTTACATTGTATCATGGACATATTATGGACTTATCCTTTCAATCATTTCATATATATATATCATAGTCATATCTTTTTATAAATATATCATTGTTATATCGTTTTATATATATACCATAGTCATATCTTTTTATAAACATATCACACATATCAAATATGACACATGAGAACTACGGAGCATGTGTCAACATGAAATATAATCATGAACACTACTTACTTGATTGGGCAGGGTTTCTCCCTAAAATTAGCTTCTTGAGTTTGTCCTTGTTCCAAGTATGATTGACCCTATCAACAATTTACCTAATTACCTAATTTCCTTGTCAAATAATAGCTTCACGATGGTCGAAAACCTAGGAAATGAGTCGAAGGAGTCGCAGACGCGTGCATGAGTCGTGAACTGGGTCAAGGCGTGAACTTTGGGTCGGTGCGGGTTGCAGTGCTGCAGGGGCAAGTGGCTACTGGGCTGCTGTAGGTGAGGTTGGACAAATGTGTGTAGATGGCTACTTGAGTGGGTGTCCGACCCGGATCCGACCCAACACGGTTGTCTTCTTCACCCGACTCGCCTGCGAATTCTCTTCCGACGATGCTTTCCGTCGTCCTCCGTCTTTACAAGGCTTTGTCACTACATATACACATAGATCCCTTGATATCTTATGCTTTCAAAAAATTGGATCACACCGGCGTCGTGTTCATCGGGAAACAAAAGACACCGACCTTTCGTCTTCCCCTTTTTCTCTCTATGCTCTGTTAATTTCAGATGACAGAGATGAGATGCGGTTTCGTGCGTCCCTTGAAAACACCAAAATTCCGGCAACGTCTTTCCACATTACAAACCCAGAAACGTAA

mRNA sequence

ATGCCAGTGCTCACTGAAAGCCGAGAGTGGGTGGCTTCTGTGCACACCAGCGACAACGGCGCTCATCTGAAGGGAAACGAACACACACAATCGACAGCCCATACGCAAATGGCGGTTTCTGGAGATCTCAGAGTCTCCGCGACACTCTGCTCTCACCATCCTCACCCTCATCGGACTTCTTTTCCCTCTTCAAAGGTTGAATTCTCTGGCTTTTCAAGTGGAGGGCTTATCAGTCATGATGTTGCTCTGAAATGGCATAACATGGCAATCGATAGTCGTAATAGGCGTGGCATTTCACAGATAACTACTCGGAGCTCAGAAAGTTATGAAATGTCGTCGAAAACATCAAGCCAAGAAGCCGAAACCTTCCTTCTGAATGCCATAAACATGAACTTCTTTGAGCGGTTGAACTTAGCTTGGAGAATTTTATTTCCTACCCCAACATCGAAGAGAAATTCGAACGCCCTGATCGCCAAACAGCGACTAAAGATGATCCTCTTTGCTGACCGATGTGCAGTTAGCGATGAGGCTAAACGAAAGATCGTTAGTAACATAGTGCAAGCGCTATCAGATTTCGTAGAAATTGAATCGAAGGATAAAGTTGAGTTGAGCATGTCAACGGATTCTGATCTTGGAACCATTTACTCTGTCACGGTACCTGTGAGAAGGGTGAAAGCAGAATATCAAGAAGCAGACGAGAGTGCAACGATAACGAACATCGAGTACAAAGATAACGGAGAGACGACTGGTTCTGTTGATGTGAGTGCTGCAGGGGCAAGTGGCTACTGGGCTGCTGTAGGTGAGGTTGGACAAATGTGTGTAGATGGCTACTTGAGTGGGTGTCCGACCCGGATCCGACCCAACACGGTTGTCTTCTTCACCCGACTCGCCTGCGAATTCTCTTCCGACGATGCTTTCCGTCGTCCTCCGTCTTTACAAGGCTTTGTCACTACATATACACATAGATCCCTTGATATCTTATGCTTTCAAAAAATTGGATCACACCGGCGTCGTGTTCATCGGGAAACAAAAGACACCGACCTTTCGTCTTCCCCTTTTTCTCTCTATGCTCTGTTAATTTCAGATGACAGAGATGAGATGCGGTTTCGTGCGTCCCTTGAAAACACCAAAATTCCGGCAACGTCTTTCCACATTACAAACCCAGAAACGTAA

Coding sequence (CDS)

ATGCCAGTGCTCACTGAAAGCCGAGAGTGGGTGGCTTCTGTGCACACCAGCGACAACGGCGCTCATCTGAAGGGAAACGAACACACACAATCGACAGCCCATACGCAAATGGCGGTTTCTGGAGATCTCAGAGTCTCCGCGACACTCTGCTCTCACCATCCTCACCCTCATCGGACTTCTTTTCCCTCTTCAAAGGTTGAATTCTCTGGCTTTTCAAGTGGAGGGCTTATCAGTCATGATGTTGCTCTGAAATGGCATAACATGGCAATCGATAGTCGTAATAGGCGTGGCATTTCACAGATAACTACTCGGAGCTCAGAAAGTTATGAAATGTCGTCGAAAACATCAAGCCAAGAAGCCGAAACCTTCCTTCTGAATGCCATAAACATGAACTTCTTTGAGCGGTTGAACTTAGCTTGGAGAATTTTATTTCCTACCCCAACATCGAAGAGAAATTCGAACGCCCTGATCGCCAAACAGCGACTAAAGATGATCCTCTTTGCTGACCGATGTGCAGTTAGCGATGAGGCTAAACGAAAGATCGTTAGTAACATAGTGCAAGCGCTATCAGATTTCGTAGAAATTGAATCGAAGGATAAAGTTGAGTTGAGCATGTCAACGGATTCTGATCTTGGAACCATTTACTCTGTCACGGTACCTGTGAGAAGGGTGAAAGCAGAATATCAAGAAGCAGACGAGAGTGCAACGATAACGAACATCGAGTACAAAGATAACGGAGAGACGACTGGTTCTGTTGATGTGAGTGCTGCAGGGGCAAGTGGCTACTGGGCTGCTGTAGGTGAGGTTGGACAAATGTGTGTAGATGGCTACTTGAGTGGGTGTCCGACCCGGATCCGACCCAACACGGTTGTCTTCTTCACCCGACTCGCCTGCGAATTCTCTTCCGACGATGCTTTCCGTCGTCCTCCGTCTTTACAAGGCTTTGTCACTACATATACACATAGATCCCTTGATATCTTATGCTTTCAAAAAATTGGATCACACCGGCGTCGTGTTCATCGGGAAACAAAAGACACCGACCTTTCGTCTTCCCCTTTTTCTCTCTATGCTCTGTTAATTTCAGATGACAGAGATGAGATGCGGTTTCGTGCGTCCCTTGAAAACACCAAAATTCCGGCAACGTCTTTCCACATTACAAACCCAGAAACGTAA

Protein sequence

MPVLTESREWVASVHTSDNGAHLKGNEHTQSTAHTQMAVSGDLRVSATLCSHHPHPHRTSFPSSKVEFSGFSSGGLISHDVALKWHNMAIDSRNRRGISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNALIAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIYSVTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDVSAAGASGYWAAVGEVGQMCVDGYLSGCPTRIRPNTVVFFTRLACEFSSDDAFRRPPSLQGFVTTYTHRSLDILCFQKIGSHRRRVHRETKDTDLSSSPFSLYALLISDDRDEMRFRASLENTKIPATSFHITNPET
Homology
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BLAST of CmaCh05G008950 vs. Swiss-Prot
Match: MINE1_ARATH (Cell division topological specificity factor homolog, chloroplastic OS=Arabidopsis thaliana GN=MINE1 PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 4.8e-64
Identity = 136/219 (62.10%), Postives = 168/219 (76.71%), Query Frame = 1 

Query: 40  SGDLRVSATLCS--HHPHPHRTSFP--SSKVEFSGFSSGGLISHDVALKWHNMAIDSRNR 99
           SG LR+SATL S  HH H +R S P  SSKV+F+GF S G+ S +       +AI   N 
Sbjct: 5   SGTLRISATLVSPYHHHHRNRLSLPSSSSKVDFTGFISNGVNSLETQKCTPGLAISRENT 64

Query: 100 RGISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNA 159
           RG  ++  R++  YE+S   + QE E+FL NAINM FF+RLNLAW+I+FP+  S+R+SNA
Sbjct: 65  RGQVKVLARNTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRRSSNA 124

Query: 160 LIAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIY 219
            IAKQRLKMILF+DRC VSDEAKRKIV+NI+ ALSDFVEIES++KV+L++STD DLGTIY
Sbjct: 125 RIAKQRLKMILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIY 184

Query: 220 SVTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDV 255
           SVTVPVRRVK EYQ+ DE+ TITN+EYKD  +  GSVDV
Sbjct: 185 SVTVPVRRVKPEYQDVDEAGTITNVEYKDTRD--GSVDV 221

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BLAST of CmaCh05G008950 vs. TrEMBL
Match: A0A0A0KQJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G469010 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 3.1e-102
Identity = 200/218 (91.74%), Postives = 207/218 (94.95%), Query Frame = 1 

Query: 37  MAVSGDLRVSATLCSHHPHPHRTSFPSSKVEFSGFSSGGLISHDVALKWHNMAIDSRNRR 96
           MAVSGDLRVSATLCSHH HP R SFPSSKVEFSGFS GG  SH+VALKW N AIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60

Query: 97  GISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNAL 156
           GISQITT SSES+E+SSKTSSQEAETFLLNAINMNFFERLNLAWRILFP+P SKRNSNAL
Sbjct: 61  GISQITTGSSESFELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120

Query: 157 IAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIYS 216
           IAKQRLKMILFADRCAVSDEAKRKIVSNIV+ALSDFVEIESKDKV+LSMSTDSDLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 217 VTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDV 255
           VTVPVRRVKAEYQEADES TITNIEYKDNGET+GSVDV
Sbjct: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDV 218

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BLAST of CmaCh05G008950 vs. TrEMBL
Match: M5XG81_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011116mg PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 5.1e-73
Identity = 149/218 (68.35%), Postives = 183/218 (83.94%), Query Frame = 1 

Query: 37  MAVSGDLRVSATLCSHHPHPHRTSFPSSKVEFSGFSSGGLISHDVALKWHNMAIDSRNRR 96
           MAV GDLRVSATL SH  H  R+S P+SKV+F+ FS+ G    D+ALKW +M+ D   RR
Sbjct: 1   MAVFGDLRVSATLASHTTHSLRSSLPNSKVDFASFSNRGSSISDIALKWPSMSFD---RR 60

Query: 97  GISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNAL 156
            I Q + R S  +++SSK+SSQ++E+FLLNAINM+F +RLNLAW+I+FP+PT++R+SNA 
Sbjct: 61  SIRQHSKRLSGDFQLSSKSSSQDSESFLLNAINMSFLDRLNLAWKIMFPSPTTRRSSNAN 120

Query: 157 IAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIYS 216
           IAKQRLKMILF+DRCAVSDEAKR IV+NIV ALSDFVEIES+DKV+LS+S D+D+GTIYS
Sbjct: 121 IAKQRLKMILFSDRCAVSDEAKRMIVNNIVHALSDFVEIESRDKVQLSVSADTDVGTIYS 180

Query: 217 VTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDV 255
           VTVPVRRVK EYQ  DE+ TITNIEYKD GE++GSVDV
Sbjct: 181 VTVPVRRVKPEYQIGDETGTITNIEYKDTGESSGSVDV 215

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BLAST of CmaCh05G008950 vs. TrEMBL
Match: A0A061EHN6_THECC (Bacterial MinE 1 isoform 1 OS=Theobroma cacao GN=TCM_011619 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.4e-70
Identity = 147/219 (67.12%), Postives = 179/219 (81.74%), Query Frame = 1 

Query: 37  MAVSGDLRVSATLCSHHPH-PHRTSFPSSKVEFSGFSSGGLISHDVALKWHNMAIDSRNR 96
           MA+SG+LRV+ATL S+H H P R+S  SSKV+F G   GG    +++LKW+ + I+SR+ 
Sbjct: 1   MAISGNLRVAATLSSYHQHHPFRSSILSSKVDFMGSMKGGSSFSEISLKWNGITINSRDI 60

Query: 97  RGISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNA 156
           RG ++        +++S+   + E E+FLLNAINM+FFERLNLAW+I+FP+P SKR+SNA
Sbjct: 61  RGQTKRLAGIMGDFKLSTNAVNHEVESFLLNAINMSFFERLNLAWKIVFPSPASKRSSNA 120

Query: 157 LIAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIY 216
            IAKQRLKMILF+DRCAVSDEAK+KIV NIV+ALSDFVEIESKDKV LS+STDSDLGTIY
Sbjct: 121 NIAKQRLKMILFSDRCAVSDEAKQKIVKNIVRALSDFVEIESKDKVHLSVSTDSDLGTIY 180

Query: 217 SVTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDV 255
           SVTVPVRRVKAEYQ ADE+ TI NIEYKD GE +GSVDV
Sbjct: 181 SVTVPVRRVKAEYQVADEAGTIRNIEYKDTGERSGSVDV 219

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BLAST of CmaCh05G008950 vs. TrEMBL
Match: A0A067KYP8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15664 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.4e-70
Identity = 146/220 (66.36%), Postives = 179/220 (81.36%), Query Frame = 1 

Query: 37  MAVSGDLRVSATLCSHHPHPHRTSFPSS--KVEFSGFSSGGLISHDVALKWHNMAIDSRN 96
           MA+SGDLRVSATL S+H HP R+S PSS  KVEF GF  GG  +     KW  ++ID   
Sbjct: 1   MAISGDLRVSATLASYHKHPFRSSLPSSNSKVEFIGFPGGGSSASPNTHKWPGISIDRWK 60

Query: 97  RRGISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSN 156
               S+  +  +  Y++SS + S+EAE FLLNAINM+FFERLNLAW+I+FP+P  +++SN
Sbjct: 61  LHNQSRRFSGITGDYQLSSTSISEEAENFLLNAINMSFFERLNLAWKIVFPSPARRKSSN 120

Query: 157 ALIAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTI 216
           A IAKQRLKMILF+DRCAVSDEAKRKIVSNIV ALS+FVEIES+DKV+LS++TD+DLGT+
Sbjct: 121 ARIAKQRLKMILFSDRCAVSDEAKRKIVSNIVHALSEFVEIESQDKVQLSVTTDNDLGTV 180

Query: 217 YSVTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDV 255
           YSVTVPVRRV+AEYQ+A+E  +ITNIEYKD GET+GSVDV
Sbjct: 181 YSVTVPVRRVRAEYQDAEEIGSITNIEYKDTGETSGSVDV 220

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BLAST of CmaCh05G008950 vs. TrEMBL
Match: A0A0D2T2C7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G178200 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.4e-70
Identity = 145/218 (66.51%), Postives = 175/218 (80.28%), Query Frame = 1 

Query: 37  MAVSGDLRVSATLCSHHPHPHRTSFPSSKVEFSGFSSGGLISHDVALKWHNMAIDSRNRR 96
           MA+ G+LRV ATL S+H HP RT   SSKVEF GF +GG    ++  KW+ M I+SR+  
Sbjct: 1   MAIYGNLRVDATLASYHQHPFRTYIRSSKVEFVGFMNGGSRFSEITPKWNGMTINSRSFG 60

Query: 97  GISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNAL 156
             ++ +      Y+ S     +E E+FLL+AINM+FFERL+LAW+I+FP+P S+R+SNA 
Sbjct: 61  SKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNAN 120

Query: 157 IAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIYS 216
           IAKQRLKMILF+DRCAVSDEAK+KIV NIV ALSDFVEIESKDKV+LS+STDSDLGTIYS
Sbjct: 121 IAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYS 180

Query: 217 VTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDV 255
           VTVPVRRVKAEYQEADE+ TITNI+YKD GE +GSVDV
Sbjct: 181 VTVPVRRVKAEYQEADETGTITNIDYKDTGERSGSVDV 218

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BLAST of CmaCh05G008950 vs. TAIR10
Match: AT1G69390.1 (AT1G69390.1 homologue of bacterial MinE 1)

HSP 1 Score: 246.5 bits (628), Expect = 2.7e-65
Identity = 136/219 (62.10%), Postives = 168/219 (76.71%), Query Frame = 1 

Query: 40  SGDLRVSATLCS--HHPHPHRTSFP--SSKVEFSGFSSGGLISHDVALKWHNMAIDSRNR 99
           SG LR+SATL S  HH H +R S P  SSKV+F+GF S G+ S +       +AI   N 
Sbjct: 5   SGTLRISATLVSPYHHHHRNRLSLPSSSSKVDFTGFISNGVNSLETQKCTPGLAISRENT 64

Query: 100 RGISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNA 159
           RG  ++  R++  YE+S   + QE E+FL NAINM FF+RLNLAW+I+FP+  S+R+SNA
Sbjct: 65  RGQVKVLARNTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRRSSNA 124

Query: 160 LIAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIY 219
            IAKQRLKMILF+DRC VSDEAKRKIV+NI+ ALSDFVEIES++KV+L++STD DLGTIY
Sbjct: 125 RIAKQRLKMILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIY 184

Query: 220 SVTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDV 255
           SVTVPVRRVK EYQ+ DE+ TITN+EYKD  +  GSVDV
Sbjct: 185 SVTVPVRRVKPEYQDVDEAGTITNVEYKDTRD--GSVDV 221

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BLAST of CmaCh05G008950 vs. NCBI nr
Match: gi|449452056|ref|XP_004143776.1| (PREDICTED: cell division topological specificity factor homolog, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 4.4e-102
Identity = 200/218 (91.74%), Postives = 207/218 (94.95%), Query Frame = 1 

Query: 37  MAVSGDLRVSATLCSHHPHPHRTSFPSSKVEFSGFSSGGLISHDVALKWHNMAIDSRNRR 96
           MAVSGDLRVSATLCSHH HP R SFPSSKVEFSGFS GG  SH+VALKW N AIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60

Query: 97  GISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNAL 156
           GISQITT SSES+E+SSKTSSQEAETFLLNAINMNFFERLNLAWRILFP+P SKRNSNAL
Sbjct: 61  GISQITTGSSESFELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120

Query: 157 IAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIYS 216
           IAKQRLKMILFADRCAVSDEAKRKIVSNIV+ALSDFVEIESKDKV+LSMSTDSDLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 217 VTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDV 255
           VTVPVRRVKAEYQEADES TITNIEYKDNGET+GSVDV
Sbjct: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDV 218

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BLAST of CmaCh05G008950 vs. NCBI nr
Match: gi|659131559|ref|XP_008465747.1| (PREDICTED: cell division topological specificity factor homolog, chloroplastic-like [Cucumis melo])

HSP 1 Score: 378.3 bits (970), Expect = 1.7e-101
Identity = 199/218 (91.28%), Postives = 206/218 (94.50%), Query Frame = 1 

Query: 37  MAVSGDLRVSATLCSHHPHPHRTSFPSSKVEFSGFSSGGLISHDVALKWHNMAIDSRNRR 96
           MAVSGDLRVSATLCSHH HP R SFPSSKVEFSGFS GG  SH+VALKW N AID RNRR
Sbjct: 1   MAVSGDLRVSATLCSHHSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDRRNRR 60

Query: 97  GISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNAL 156
           GISQITT SSES+E+SSKTSSQEAETFLLNAINMNFFERLNLAWRILFP+P SKRNSNAL
Sbjct: 61  GISQITTGSSESFELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120

Query: 157 IAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIYS 216
           IAKQRLKMILFADRCAVSDEAKRKIVSNIV+ALSDFVEIESKDKV+LSMSTDSDLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 217 VTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDV 255
           VTVPVRRVKAEYQEADES TITNIEYKDNGET+GSVDV
Sbjct: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDV 218

[Close]
BLAST of CmaCh05G008950 vs. NCBI nr
Match: gi|645229635|ref|XP_008221552.1| (PREDICTED: cell division topological specificity factor homolog, chloroplastic-like [Prunus mume])

HSP 1 Score: 286.2 bits (731), Expect = 8.7e-74
Identity = 150/218 (68.81%), Postives = 184/218 (84.40%), Query Frame = 1 

Query: 37  MAVSGDLRVSATLCSHHPHPHRTSFPSSKVEFSGFSSGGLISHDVALKWHNMAIDSRNRR 96
           MAV GDLRVSATL SH  H  R+S P+SKV+F+ FS+GG    D+ALKW +M+ D   RR
Sbjct: 1   MAVFGDLRVSATLASHTTHSLRSSLPNSKVDFASFSNGGSSISDIALKWPSMSFD---RR 60

Query: 97  GISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNAL 156
            I Q + R S  +++SSK+SSQ++E+FLLNAINM+F +RLNLAW+I+FP+PT++R+SNA 
Sbjct: 61  SIRQHSKRLSGDFQLSSKSSSQDSESFLLNAINMSFLDRLNLAWKIMFPSPTTRRSSNAN 120

Query: 157 IAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIYS 216
           IAKQRLKMILF+DRCAVSDEAKR IV+NIV ALSDFVEIES+DKV+LS+S D+D+GTIYS
Sbjct: 121 IAKQRLKMILFSDRCAVSDEAKRMIVNNIVHALSDFVEIESRDKVQLSVSADTDVGTIYS 180

Query: 217 VTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDV 255
           VTVPVRRVK EYQ  DE+ TITNIEYKD GE++GSVDV
Sbjct: 181 VTVPVRRVKPEYQIGDETGTITNIEYKDTGESSGSVDV 215

[Close]
BLAST of CmaCh05G008950 vs. NCBI nr
Match: gi|596217574|ref|XP_007223943.1| (hypothetical protein PRUPE_ppa011116mg [Prunus persica])

HSP 1 Score: 283.1 bits (723), Expect = 7.3e-73
Identity = 149/218 (68.35%), Postives = 183/218 (83.94%), Query Frame = 1 

Query: 37  MAVSGDLRVSATLCSHHPHPHRTSFPSSKVEFSGFSSGGLISHDVALKWHNMAIDSRNRR 96
           MAV GDLRVSATL SH  H  R+S P+SKV+F+ FS+ G    D+ALKW +M+ D   RR
Sbjct: 1   MAVFGDLRVSATLASHTTHSLRSSLPNSKVDFASFSNRGSSISDIALKWPSMSFD---RR 60

Query: 97  GISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNAL 156
            I Q + R S  +++SSK+SSQ++E+FLLNAINM+F +RLNLAW+I+FP+PT++R+SNA 
Sbjct: 61  SIRQHSKRLSGDFQLSSKSSSQDSESFLLNAINMSFLDRLNLAWKIMFPSPTTRRSSNAN 120

Query: 157 IAKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIYS 216
           IAKQRLKMILF+DRCAVSDEAKR IV+NIV ALSDFVEIES+DKV+LS+S D+D+GTIYS
Sbjct: 121 IAKQRLKMILFSDRCAVSDEAKRMIVNNIVHALSDFVEIESRDKVQLSVSADTDVGTIYS 180

Query: 217 VTVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDV 255
           VTVPVRRVK EYQ  DE+ TITNIEYKD GE++GSVDV
Sbjct: 181 VTVPVRRVKPEYQIGDETGTITNIEYKDTGESSGSVDV 215

[Close]
BLAST of CmaCh05G008950 vs. NCBI nr
Match: gi|645230002|ref|XP_008221724.1| (PREDICTED: cell division topological specificity factor homolog, chloroplastic-like, partial [Prunus mume])

HSP 1 Score: 282.7 bits (722), Expect = 9.6e-73
Identity = 148/217 (68.20%), Postives = 183/217 (84.33%), Query Frame = 1 

Query: 38  AVSGDLRVSATLCSHHPHPHRTSFPSSKVEFSGFSSGGLISHDVALKWHNMAIDSRNRRG 97
           +V GDLRVSATL SH  H  R+S P+SKV+F+ FS+GG    D+ALKW +M+ D   RR 
Sbjct: 1   SVFGDLRVSATLASHTTHSLRSSLPNSKVDFASFSNGGSSISDIALKWPSMSFD---RRS 60

Query: 98  ISQITTRSSESYEMSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPTSKRNSNALI 157
           I Q + R S  +++SSK+SSQ++E+FLLNAINM+F +RLNLAW+I+FP+PT++R+SNA I
Sbjct: 61  IRQHSKRLSGDFQLSSKSSSQDSESFLLNAINMSFLDRLNLAWKIMFPSPTTRRSSNANI 120

Query: 158 AKQRLKMILFADRCAVSDEAKRKIVSNIVQALSDFVEIESKDKVELSMSTDSDLGTIYSV 217
           AKQRLKMILF+DRCAVSDEAKR IV+NIV ALSDFVEIES+DKV+LS+S D+D+GTIYSV
Sbjct: 121 AKQRLKMILFSDRCAVSDEAKRMIVNNIVHALSDFVEIESRDKVQLSVSADTDVGTIYSV 180

Query: 218 TVPVRRVKAEYQEADESATITNIEYKDNGETTGSVDV 255
           TVPVRRVK EYQ  DE+ TITNIEYKD GE++GSVDV
Sbjct: 181 TVPVRRVKPEYQIGDETGTITNIEYKDTGESSGSVDV 214

The following BLAST results are available for this feature:
BLAST of CmaCh05G008950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MINE1_ARATH4.8e-6462.10Cell division topological specificity factor homolog, chloroplastic OS=Arabidops... [more]
BLAST of CmaCh05G008950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQJ9_CUCSA3.1e-10291.74Uncharacterized protein OS=Cucumis sativus GN=Csa_5G469010 PE=4 SV=1[more]
M5XG81_PRUPE5.1e-7368.35Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011116mg PE=4 SV=1[more]
A0A061EHN6_THECC1.4e-7067.12Bacterial MinE 1 isoform 1 OS=Theobroma cacao GN=TCM_011619 PE=4 SV=1[more]
A0A067KYP8_JATCU1.4e-7066.36Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15664 PE=4 SV=1[more]
A0A0D2T2C7_GOSRA2.4e-7066.51Uncharacterized protein OS=Gossypium raimondii GN=B456_008G178200 PE=4 SV=1[more]
BLAST of CmaCh05G008950 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69390.12.7e-6562.10 homologue of bacterial MinE 1[more]
BLAST of CmaCh05G008950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449452056|ref|XP_004143776.1|4.4e-10291.74PREDICTED: cell division topological specificity factor homolog, chloroplastic-l... [more]
gi|659131559|ref|XP_008465747.1|1.7e-10191.28PREDICTED: cell division topological specificity factor homolog, chloroplastic-l... [more]
gi|645229635|ref|XP_008221552.1|8.7e-7468.81PREDICTED: cell division topological specificity factor homolog, chloroplastic-l... [more]
gi|596217574|ref|XP_007223943.1|7.3e-7368.35hypothetical protein PRUPE_ppa011116mg [Prunus persica][more]
gi|645230002|ref|XP_008221724.1|9.6e-7368.20PREDICTED: cell division topological specificity factor homolog, chloroplastic-l... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005527MinE
Vocabulary: Biological Process
TermDefinition
GO:0032955regulation of barrier septum assembly
GO:0051301cell division
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010020 chloroplast fission
biological_process GO:0032955 regulation of barrier septum assembly
biological_process GO:0051301 cell division
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0051117 ATPase binding
molecular_function GO:0042802 identical protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G008950.1CmaCh05G008950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005527Septum formation topological specificity factor MinEPFAMPF03776MinEcoord: 157..222
score: 4.0
NoneNo IPR availablePANTHERPTHR33404FAMILY NOT NAMEDcoord: 54..254
score: 3.2
NoneNo IPR availablePANTHERPTHR33404:SF2CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTICcoord: 54..254
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh05G008950CmoCh12G006760Cucurbita moschata (Rifu)cmacmoB771
CmaCh05G008950Cp4.1LG00g00320Cucurbita pepo (Zucchini)cmacpeB761
CmaCh05G008950Cp4.1LG07g06410Cucurbita pepo (Zucchini)cmacpeB800
CmaCh05G008950Cla97C09G183420Watermelon (97103) v2cmawmbB833
CmaCh05G008950Carg26230Silver-seed gourdcarcmaB0445
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh05G008950CmaCh12G007360Cucurbita maxima (Rimu)cmacmaB197
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh05G008950Cucumber (Chinese Long) v2cmacuB802
CmaCh05G008950Cucumber (Chinese Long) v2cmacuB804
CmaCh05G008950Melon (DHL92) v3.5.1cmameB715
CmaCh05G008950Melon (DHL92) v3.5.1cmameB716
CmaCh05G008950Watermelon (Charleston Gray)cmawcgB685
CmaCh05G008950Watermelon (97103) v1cmawmB749
CmaCh05G008950Bottle gourd (USVL1VR-Ls)cmalsiB722
CmaCh05G008950Cucumber (Gy14) v2cgybcmaB693
CmaCh05G008950Melon (DHL92) v3.6.1cmamedB806
CmaCh05G008950Melon (DHL92) v3.6.1cmamedB805
CmaCh05G008950Cucumber (Chinese Long) v3cmacucB0949
CmaCh05G008950Cucumber (Chinese Long) v3cmacucB0947
CmaCh05G008950Watermelon (97103) v2cmawmbB804
CmaCh05G008950Wax gourdcmawgoB0931
CmaCh05G008950Cucumber (Gy14) v1cgycmaB0016
CmaCh05G008950Cucurbita moschata (Rifu)cmacmoB787
CmaCh05G008950Wild cucumber (PI 183967)cmacpiB813
CmaCh05G008950Wild cucumber (PI 183967)cmacpiB815