CmaCh05G004850 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh05G004850
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pollen Ole e I family allergen
Location	Cma_Chr05 : 2282997 .. 2286110 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTCCAATTCCATACGTTTCAGTATATCATTGGAGGAAAATAGTTTATTATATAGGATCATTCACAGGTTAAAAGAACCCTACACGGCATAATTTCTTACACCGCAATTCCAGGCTTTCCCTCGCAGCATCTGATTAGAGGTTTTCACTTTACTCTTTATTATTCAAACCCTTACTTCTCATTTTCCCTTCATCAGTTCTTTCTTCTTCCATTTCCATTTTTCTTCCAATCGAAGAACGAAAATCCATGGCTCGATTTGCGATTCTCTTTGCTCTCATTTTGCTTCCTGCACTCGCCGTCGCAAGCCGGCCCGTTAGAACTCCGTTCCTTGTTCGTGGTAAAGTGTTCTGTGATACTTGCGTTGCCGGCTTCGAAACCTCCGCTACCACCTACATTCCCGGTATCTGCTCTCTTTCCTCGCTTTTAGCCTACTAGTTGAGAATTGTGGATGTGTTTGTTCTTATGTGCCTCGTGTTCTTGCTAGATCTGTGATGTAGTTAAGAGATTATGTTGATTTGTGGCTTGCTTGCTAGTTTAATGGTGGATCTGGTGCTTGAATCTTGAATGCTGCCTGATGGTATGTGGAGTGAGTTAGGGTTTAATTATAGGGATTATTTTAGTCCAAATTCGCGGTTTGGGTATGATTATTTTTTAATTGAAGCTTAATCTTGGGCTTAGTAATTAGATCTATGTTTGTTAGGTAAGAAGACTTATTTATTTTATATTTCTTTCTATGTCGTGCGTAACTTTTTATATTTAAGCAATGATTTTTCAAATCTGCCCGCTTACATTAGAATTTTTGTATTGATCCTGTATTTAGAACACTTCTCAGAAACTTTTACATACTATGTGTCCGAAATAACATCAACTGCTCGTAATTCTTTTTGCATCCATTGTCTGTGTTAAGAATATGAATAGGATAGAAGATTAAATGTAACAAACTAGCAGTTTAAGGCTTAAGCTTTTAGGTCATGTAGTAATTTAAATTTAAAATGGTTGTGGAGTAAAAGGTCGTGGGTAGGGGTGTACATTCAACCCAATAACCTGGACCAACCCAACCCGAATTATAAGGGTTGGGTTGGATTAGCATTTCAGGTAGGGTTGGGTTCATTTTTCTGAACCCGAACTGAATCGGTTCGGTTTCGGGTTCGTGGATAATTATACATCGATTTGTGTTTATTTGTGAATTTTTAATATATTTTATCTAAGATTGTATTTGAATAATTATAAATTGTGGATAAATAAAACTAAAAAAATCCGATAACACGACAACCCAACCTGAAGGTTGGGTTGGGTTGAGTTGTGAAAATTTTCGGGCTGGGTTGGGTTATCAATCCAACCAATCTGAACTTTTGGGTTGGGTCAAAAAAATCCTTCAACCCAACCCGAACCATGTACATCCCTACTCATGGGTCATTTGTCATGGGCTAATTTTCAAGCCCTTAAAAAGGATGAGAGTGAGGTGGTTGGTATATCAACTTGCTTCCAGATTCATTTTAGTATGTGCAATCGGTTGATTCAAACCTCTAATATCTTTGTCGACCATAAGTGTCTTAACTAGTTTTGTTTGTTAAATCATTACCTGGTTGGTAGATATAATCTTTTGTTATATCCCTAACCCTTCTCTTGATTGGAGTCAGGATATGAATTTAATATACAAAGGCCCACATGCAGGTTATTATACAAAGGCCCACGTGTCTTAACTTAGTGCTTAACATGTGATAATTGTCTAGGTGTGGGTAGTTCACGGATAAAGCCTTTTCACCAATTGTTCAATTTCCTTGTAGGTGCTAAGGTCGGAATTGAATGCAAAGACAGGAACACAATGGAACTTCTATATAAGCATGAGGCCACGACAGACTCCACTGGTTCTTACTCACTCTTAGTCAATGAAGACCACGAGGACCAAGTTTGTGATGCCGTACTAATCAGCAGCCCTCAGAAGGATTGTTCATTAGCAGCTGAAGGCCGTGACCGTGCCCGTGTAATCCTCACCCGCTACAACGGTATGGCCTCAAACGAACGTTATGTCAATGCCATGGGTTTTGCAAGATATGAACCTATGTCTGGCTGCAACCAAGTCCTCAGTCAGTACCAGGACATCGAAGATTAGAACGGGTTTTAATCCTACAATCGCTTAGTTGTATTTCTTGAGGTATATTTGCCCTGTTCTGTTCATGCTAGTGTTGCCCCACATACTCTTTTATCTGGACATTGAATGGTGTTTGTTATTGCATTCTTAAAGATGATTAATATGTTTTGTTCATTCACTTCATTACTATCATCACCAGGATGATGCCATCAACACACCCTTATTTATAAATACAAACTAGTGAAAATAGCCTTAATGACTTCTAATTTCTAACTGAAATAGGCTACCTGTTGTTATGCCGTAACTTAATTACTTTGTTGTGCAATAATTTTCTCCGGATTATGAATTAGATCTAATAATCCCTGACTTTCTAATTTGAATCTCTATGATTTGATCTCCCATATTTGTTGAAGCAAGCCATGAAGTTCAAGCACTGCACTGGTTAAGCCGAACATGGGTTTTAAAAATCTCGAGGGAAAACTTGAAATGAAAAGTCTAAATAAGACAATATCTGCTAGCGGTGAGCCTGAGCTATTACAAATGGTATCAGAGCTAAACACCGGACGATGTACTAGCAAGGAGGCTGTTATCTAAAGGGGTAGACAGAGGCGGTGTGTCAATAAGGATGTCAGGCTTTCAAAGGGGGTGGATTTGGTGAAGGTCCCACATAGATTGAAGAAAGGAATTAGTGCGAGCTAGGACACTAGGCCTTGAACGGGATGGATTGTGAGATCACACATTGGTTGAAAAGGAGAACGAAAAACTTTTTATAAAAGTGTAGAAACCTCTCTTTAGGAGAGGTGTTTTAAAATCTAGACGGAAACCAAAGAGAAAATATTTGCTAGCAATAAGTCAAAAACCTTGTATTTAATTAGTAAGGGGTGAATTTCCAAATTTCCAACCATTCACACTTAGGATTATGAAATAAAAGAATCAACCAACTTTTAATATTTTGGCTTTAATCTTTAATAAGAAAAAGAAAAAGTTTAAAAAAAATGGTTAATATATTCGAGATAACCAC

mRNA sequence

GTGTCCAATTCCATACGTTTCAGTATATCATTGGAGGAAAATAGTTTATTATATAGGATCATTCACAGGTTAAAAGAACCCTACACGGCATAATTTCTTACACCGCAATTCCAGGCTTTCCCTCGCAGCATCTGATTAGAGGTTTTCACTTTACTCTTTATTATTCAAACCCTTACTTCTCATTTTCCCTTCATCAGTTCTTTCTTCTTCCATTTCCATTTTTCTTCCAATCGAAGAACGAAAATCCATGGCTCGATTTGCGATTCTCTTTGCTCTCATTTTGCTTCCTGCACTCGCCGTCGCAAGCCGGCCCGTTAGAACTCCGTTCCTTGTTCGTGGTAAAGTGTTCTGTGATACTTGCGTTGCCGGCTTCGAAACCTCCGCTACCACCTACATTCCCGGTGCTAAGGTCGGAATTGAATGCAAAGACAGGAACACAATGGAACTTCTATATAAGCATGAGGCCACGACAGACTCCACTGGTTCTTACTCACTCTTAGTCAATGAAGACCACGAGGACCAAGTTTGTGATGCCGTACTAATCAGCAGCCCTCAGAAGGATTGTTCATTAGCAGCTGAAGGCCGTGACCGTGCCCGTGTAATCCTCACCCGCTACAACGGTATGGCCTCAAACGAACGTTATGTCAATGCCATGGGTTTTGCAAGATATGAACCTATGTCTGGCTGCAACCAAGTCCTCAGTCAGTACCAGGACATCGAAGATTAGAACGGGTTTTAATCCTACAATCGCTTAGTTGTATTTCTTGAGGTATATTTGCCCTGTTCTGTTCATGCTAGTGTTGCCCCACATACTCTTTTATCTGGACATTGAATGGTGTTTGTTATTGCATTCTTAAAGATGATTAATATGTTTTGTTCATTCACTTCATTACTATCATCACCAGGATGATGCCATCAACACACCCTTATTTATAAATACAAACTAGTGAAAATAGCCTTAATGACTTCTAATTTCTAACTGAAATAGGCTACCTGTTGTTATGCCGTAACTTAATTACTTTGTTGTGCAATAATTTTCTCCGGATTATGAATTAGATCTAATAATCCCTGACTTTCTAATTTGAATCTCTATGATTTGATCTCCCATATTTGTTGAAGCAAGCCATGAAGTTCAAGCACTGCACTGGTTAAGCCGAACATGGGTTTTAAAAATCTCGAGGGAAAACTTGAAATGAAAAGTCTAAATAAGACAATATCTGCTAGCGGTGAGCCTGAGCTATTACAAATGGTATCAGAGCTAAACACCGGACGATGTACTAGCAAGGAGGCTGTTATCTAAAGGGGTAGACAGAGGCGGTGTGTCAATAAGGATGTCAGGCTTTCAAAGGGGGTGGATTTGGTGAAGGTCCCACATAGATTGAAGAAAGGAATTAGTGCGAGCTAGGACACTAGGCCTTGAACGGGATGGATTGTGAGATCACACATTGGTTGAAAAGGAGAACGAAAAACTTTTTATAAAAGTGTAGAAACCTCTCTTTAGGAGAGGTGTTTTAAAATCTAGACGGAAACCAAAGAGAAAATATTTGCTAGCAATAAGTCAAAAACCTTGTATTTAATTAGTAAGGGGTGAATTTCCAAATTTCCAACCATTCACACTTAGGATTATGAAATAAAAGAATCAACCAACTTTTAATATTTTGGCTTTAATCTTTAATAAGAAAAAGAAAAAGTTTAAAAAAAATGGTTAATATATTCGAGATAACCAC

Coding sequence (CDS)

ATGGCTCGATTTGCGATTCTCTTTGCTCTCATTTTGCTTCCTGCACTCGCCGTCGCAAGCCGGCCCGTTAGAACTCCGTTCCTTGTTCGTGGTAAAGTGTTCTGTGATACTTGCGTTGCCGGCTTCGAAACCTCCGCTACCACCTACATTCCCGGTGCTAAGGTCGGAATTGAATGCAAAGACAGGAACACAATGGAACTTCTATATAAGCATGAGGCCACGACAGACTCCACTGGTTCTTACTCACTCTTAGTCAATGAAGACCACGAGGACCAAGTTTGTGATGCCGTACTAATCAGCAGCCCTCAGAAGGATTGTTCATTAGCAGCTGAAGGCCGTGACCGTGCCCGTGTAATCCTCACCCGCTACAACGGTATGGCCTCAAACGAACGTTATGTCAATGCCATGGGTTTTGCAAGATATGAACCTATGTCTGGCTGCAACCAAGTCCTCAGTCAGTACCAGGACATCGAAGATTAG

Protein sequence

MARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKDRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVILTRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED

Homology

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BLAST of CmaCh05G004850 vs. Swiss-Prot
Match: DFC_ARATH (Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana GN=DFC PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.9e-29
Identity = 71/151 (47.02%), Postives = 87/151 (57.62%), Query Frame = 1


Query: 4   FAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKDRN 63
           F  L A++ +  L +A+  V TPF + G V+CDTC  GFET AT YI GA+V I CKDR 
Sbjct: 5   FVPLIAVLCVLVLPLAAMAVGTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVCKDRV 64

Query: 64  TMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVILTRY 123
           T++      A T   G Y + V  D +DQ C A L+ SP   C  A  GR  A VILTR 
Sbjct: 65  TLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVILTRS 124

Query: 124 NGMASNERYVNAMGFARYEPMSGCNQVLSQY 155
           NG AS   Y NAMGF R EP+ GC  +  +Y
Sbjct: 125 NGAASTRHYANAMGFFRDEPLRGCAALRKRY 155

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BLAST of CmaCh05G004850 vs. Swiss-Prot
Match: PSC13_MAIZE (Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-26
Identity = 59/155 (38.06%), Postives = 95/155 (61.29%), Query Frame = 1


Query: 5   AILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKDRNT 64
           A++  L ++ + A A  P    ++++G+V+CDTC AGF T+ T YI GAKV +ECK   T
Sbjct: 13  AVILCLCVVLSCAAADDPNLPDYVIQGRVYCDTCRAGFVTNVTEYIAGAKVRLECKHFGT 72

Query: 65  MELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVILTRYN 124
            +L    +  TD+TG+Y++ + + HE+ +C  VL++SP+KDC      RDRA V+LTR  
Sbjct: 73  GKLERAIDGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNV 132

Query: 125 GMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           G++ + R  N +G+ +  P+  C  +L Q    +D
Sbjct: 133 GISDSLRPANPLGYFKDVPLPVCAALLKQLDSDDD 167

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BLAST of CmaCh05G004850 vs. Swiss-Prot
Match: PHLB_PHLPR (Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.0e-25
Identity = 58/134 (43.28%), Postives = 81/134 (60.45%), Query Frame = 1


Query: 27  FLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKDRNTMELLYKHEATTDSTGSYSLLVN 86
           F+V G+V+CD C AGFET+ +  + GA V ++C+  N  E   K EATTD  G Y + ++
Sbjct: 6   FVVTGRVYCDPCRAGFETNVSHNVQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEID 65

Query: 87  EDHEDQVCDAVLISSPQKDCSLAAEGRDRARVILTRYNGMASNE-RYVNAMGFARYEPMS 146
           +DH++++C+ VL  SP   CS   E RDRARV LT  NG+     RY N + F R EP+ 
Sbjct: 66  QDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPLK 125

Query: 147 GCNQVLSQYQDIED 160
            C  +L  Y D+ D
Sbjct: 126 ECGGILQAY-DLRD 138

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BLAST of CmaCh05G004850 vs. Swiss-Prot
Match: LOLB_LOLPR (Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.6e-24
Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1


Query: 27  FLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKDRNTMELLYKHEATTDSTGSYSLLVN 86
           F+V G+V+CD C AGFET+ +  + GA V ++C+  +  E   K EATTD  G Y + ++
Sbjct: 6   FVVTGRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKIEID 65

Query: 87  EDHEDQVCDAVLISSPQKDCSLAAEGRDRARVILTRYNGMASNE-RYVNAMGFARYEPMS 146
           +DH++++C+ VL  SP K CS   E RDRARV LT   G+     RY N + F R EP+ 
Sbjct: 66  QDHQEEICEVVLAKSPDKSCSEIEEFRDRARVPLTSNXGIKQQGIRYANPIAFFRKEPLK 125

Query: 147 GCNQVLSQY 155
            C  +L  Y
Sbjct: 126 ECGGILQAY 134

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BLAST of CmaCh05G004850 vs. Swiss-Prot
Match: CHE1_CHEAL (Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.1e-22
Identity = 61/155 (39.35%), Postives = 87/155 (56.13%), Query Frame = 1


Query: 2   ARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKD 61
           A F ++ AL +L +LA  +      F V+G V+CDTC   F T  +T + GA V +EC++
Sbjct: 6   AVFLLVGALCVL-SLAGVANAAENHFKVQGMVYCDTCRIQFMTRISTIMEGATVKLECRN 65

Query: 62  RNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAE---GRDRARV 121
                  +K EA TD  G YS+ VN D ED +C+  L+ SP  +CS  +     +  A+V
Sbjct: 66  ITAGTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQSAKV 125

Query: 122 ILTRYNGMASNERYVNAMGFARYEPMSGCNQVLSQ 154
            LT  NG AS+ R  NA+GF R EP+  C +VL +
Sbjct: 126 SLTSNNGEASDIRSANALGFMRKEPLKECPEVLKE 159

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BLAST of CmaCh05G004850 vs. TrEMBL
Match: A0A0A0LQA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G309370 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 4.3e-71
Identity = 135/159 (84.91%), Postives = 148/159 (93.08%), Query Frame = 1


Query: 1   MARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECK 60
           MAR  ILFALI+LPALA+ASRPVRTPF+VRGKVFCDTC+AGFETSATTYIPGAKV IECK
Sbjct: 1   MARVIILFALIMLPALALASRPVRTPFVVRGKVFCDTCLAGFETSATTYIPGAKVRIECK 60

Query: 61  DRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVIL 120
           DRN+MEL Y HEATTDSTGSY+LLVNEDH D++CDAVL+SSPQ+ CS  +EGRDRARVIL
Sbjct: 61  DRNSMELQYTHEATTDSTGSYTLLVNEDHGDELCDAVLVSSPQEKCSSVSEGRDRARVIL 120

Query: 121 TRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           TRYNG+ASNERYVNAMGFA  EPMSGCNQV+SQYQDIED
Sbjct: 121 TRYNGIASNERYVNAMGFAMDEPMSGCNQVMSQYQDIED 159

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BLAST of CmaCh05G004850 vs. TrEMBL
Match: M5XNU1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012675mg PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-53
Identity = 105/159 (66.04%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 1   MARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECK 60
           MA+  +LFAL +LPALAVA+RP+RTPF V GKVFCD C AGFETSATTYIPGA V +EC+
Sbjct: 1   MAKLIVLFALCVLPALAVATRPMRTPFTVEGKVFCDPCRAGFETSATTYIPGATVRLECR 60

Query: 61  DRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVIL 120
           DR TM++ Y  E  TDSTG+Y + V EDHEDQ CDAVL+SS QKDC+ AA GRDRARVIL
Sbjct: 61  DRKTMDIRYTKEGRTDSTGTYKIPVTEDHEDQFCDAVLVSSSQKDCAAAAPGRDRARVIL 120

Query: 121 TRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           T YNG+AS  R+ NAMGF + E +SGC Q+L Q Q+ ++
Sbjct: 121 TGYNGIASYNRFANAMGFMKNEAVSGCAQILKQLQEFDE 159

[Close]

BLAST of CmaCh05G004850 vs. TrEMBL
Match: Q2I307_VITPS (Pollen-specific protein OS=Vitis pseudoreticulata PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.1e-53
Identity = 102/159 (64.15%), Postives = 124/159 (77.99%), Query Frame = 1


Query: 1   MARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECK 60
           M R  +L AL +LPAL  A RPV  PF+++G+V+CDTC AGFETSATTYI GAKV +ECK
Sbjct: 1   MGRLMLLVALCVLPALVSAGRPVSQPFVLQGRVYCDTCRAGFETSATTYIAGAKVRVECK 60

Query: 61  DRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVIL 120
           DRN+M+LLY  E  TDSTG+Y ++V EDHEDQ+CDAVL+SSPQ DC+    GRDRA VIL
Sbjct: 61  DRNSMQLLYSIEGITDSTGTYKIMVTEDHEDQLCDAVLVSSPQSDCASVDPGRDRAAVIL 120

Query: 121 TRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           TRYNG+ S+ RY N+MGF +  PMS C Q+L QYQ+ ED
Sbjct: 121 TRYNGIVSDNRYANSMGFLKDHPMSECTQLLQQYQEFED 159

[Close]

BLAST of CmaCh05G004850 vs. TrEMBL
Match: A0A059BKH8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00490 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.2e-52
Identity = 104/159 (65.41%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 1   MARFAILFALI-LLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIEC 60
           MAR ++L AL  LLPA+AVA+RP R P  V GKV+CDTC AGFET A+TYI GAKV +EC
Sbjct: 1   MARLSVLLALCCLLPAIAVAARPARNPLTVTGKVYCDTCRAGFETPASTYIAGAKVKVEC 60

Query: 61  KDRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVI 120
           KDR +M+LLY  EATTDSTG+Y L V+EDH+DQ+CDA+L+SSPQ +C   A GRDRARVI
Sbjct: 61  KDRTSMKLLYSQEATTDSTGTYKLFVSEDHQDQLCDAMLLSSPQLNCQKPAAGRDRARVI 120

Query: 121 LTRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIE 159
           LTRYNG+ S+ RY N MGF   +P++GC QVL QYQD +
Sbjct: 121 LTRYNGIVSDTRYANNMGFEMDQPLAGCTQVLQQYQDFD 159

[Close]

BLAST of CmaCh05G004850 vs. TrEMBL
Match: E2LMG1_MONPE (Uncharacterized protein OS=Moniliophthora perniciosa (strain FA553 / isolate CP02) GN=MPER_07958 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.5e-52
Identity = 103/159 (64.78%), Postives = 125/159 (78.62%), Query Frame = 1


Query: 1   MARFAILFALI-LLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIEC 60
           MAR ++L AL  LLPA+A A+RP R P  V GKV+CDTC AGFET A+TYI GAKV +EC
Sbjct: 1   MARLSVLLALCCLLPAIAFAARPARNPLTVTGKVYCDTCRAGFETPASTYIAGAKVKVEC 60

Query: 61  KDRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVI 120
           KDR +M+LLY  EATTDSTG+Y L V+EDH+DQ+CDA+L+SSPQ +C   A GRDRARVI
Sbjct: 61  KDRTSMKLLYSQEATTDSTGTYKLFVSEDHQDQLCDAMLLSSPQPNCQKPAAGRDRARVI 120

Query: 121 LTRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIE 159
           LTRYNG+ S+ RY N MGF   +P++GC QVL QYQD +
Sbjct: 121 LTRYNGIVSDTRYANNMGFEMDQPLAGCTQVLQQYQDFD 159

[Close]

BLAST of CmaCh05G004850 vs. TAIR10
Match: AT4G08685.1 (AT4G08685.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 201.1 bits (510), Expect = 5.3e-52
Identity = 95/159 (59.75%), Postives = 121/159 (76.10%), Query Frame = 1


Query: 1   MARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECK 60
           M++  +L AL  LPALA+A+RP + PF+VRG+V+CDTC+AGFET A+TYI GA V +ECK
Sbjct: 1   MSKAVLLVALCFLPALAIAARPNKNPFVVRGRVYCDTCLAGFETPASTYISGAVVRLECK 60

Query: 61  DRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVIL 120
           DR TMEL Y HEA TDSTGSY +LVNEDH++Q CDA+L+ S Q  CS  + G DRARV L
Sbjct: 61  DRRTMELTYSHEARTDSTGSYKILVNEDHDEQFCDAMLVRSSQLRCSNVSPGHDRARVTL 120

Query: 121 TRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           TR+NG+AS++R+ N MGF R   M GC  ++  YQ+ ED
Sbjct: 121 TRFNGIASDDRFANNMGFLRDAAMPGCADIMKLYQETED 159

[Close]

BLAST of CmaCh05G004850 vs. TAIR10
Match: AT1G78040.1 (AT1G78040.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-31
Identity = 68/163 (41.72%), Postives = 101/163 (61.96%), Query Frame = 1


Query: 1   MARFAILFALILLPALAVASRPV---RTPFLVRGKVFCDTCVAGFETSATTY-IPGAKVG 60
           MA+  +L  L +LPA+A+A+R     +   +V+G  +CD C  GFET  ++Y IPGA V 
Sbjct: 1   MAKLVMLLVLCILPAIAMAARRGNIGKNTMVVQGSTYCDICKFGFETPESSYFIPGATVK 60

Query: 61  IECKDRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRA 120
           + CKDR TME +Y  +A +D  G Y  +V++DH DQ+CD +L+ S  K CS  + GR+++
Sbjct: 61  LSCKDRKTMEEVYTDKAVSDKEGKYKFIVHDDHRDQMCDVLLVKSSDKTCSKISVGREKS 120

Query: 121 RVILTRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           RVIL  Y+G+AS  R+ N MGF +      C+ +  +Y   ED
Sbjct: 121 RVILNHYSGIASQIRHANNMGFEKEVSDVFCSALFQKYMVDED 163

[Close]

BLAST of CmaCh05G004850 vs. TAIR10
Match: AT5G10130.1 (AT5G10130.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 128.6 bits (322), Expect = 3.3e-30
Identity = 71/151 (47.02%), Postives = 87/151 (57.62%), Query Frame = 1


Query: 4   FAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKDRN 63
           F  L A++ +  L +A+  V TPF + G V+CDTC  GFET AT YI GA+V I CKDR 
Sbjct: 5   FVPLIAVLCVLVLPLAAMAVGTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVCKDRV 64

Query: 64  TMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVILTRY 123
           T++      A T   G Y + V  D +DQ C A L+ SP   C  A  GR  A VILTR 
Sbjct: 65  TLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVILTRS 124

Query: 124 NGMASNERYVNAMGFARYEPMSGCNQVLSQY 155
           NG AS   Y NAMGF R EP+ GC  +  +Y
Sbjct: 125 NGAASTRHYANAMGFFRDEPLRGCAALRKRY 155

[Close]

BLAST of CmaCh05G004850 vs. TAIR10
Match: AT1G29140.1 (AT1G29140.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 102.1 bits (253), Expect = 3.3e-22
Identity = 60/168 (35.71%), Postives = 88/168 (52.38%), Query Frame = 1


Query: 1   MARFAILF-----ALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKV 60
           MA+F I+F         L     A       F ++G V+CDTC   F T  + ++ GAKV
Sbjct: 1   MAKFFIVFLASALCFTTLVHFTAADADDFDKFHIKGSVYCDTCRVQFITRISKFLEGAKV 60

Query: 61  GIECKDRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEG--- 120
            +ECK R    +    EA TD+ G+Y + V  DHE++VC+ VL+ SP  +C         
Sbjct: 61  KLECKGRENQTVTLTKEAVTDNAGNYQMEVMGDHEEEVCEIVLLQSPDPECGDVNNQEFL 120

Query: 121 RDRARVILTRYNGMASNE-RYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           R+ AR+ LT  +G+ SNE R +N +GF R  P++ C QV  +   + D
Sbjct: 121 RNAARISLTANDGIVSNETRTINPLGFMRKTPLAECPQVFKELGIVPD 168

[Close]

BLAST of CmaCh05G004850 vs. TAIR10
Match: AT5G45880.1 (AT5G45880.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 99.4 bits (246), Expect = 2.2e-21
Identity = 60/171 (35.09%), Postives = 89/171 (52.05%), Query Frame = 1


Query: 1   MARFAILFALILLPAL--------AVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPG 60
           MA  AI F+  ++ A+        A A       F ++G V+CDTC   F T  + ++ G
Sbjct: 1   MASKAIFFSFFVVSAVCLSSLAGFAAADADDFDRFQIQGSVYCDTCRVQFVTRLSKFLEG 60

Query: 61  AKVGIECKDRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDC---SLA 120
           AKV +EC+ R    +    EA TD TGSY + V  DHE++VC+ VL+ SP   C   S  
Sbjct: 61  AKVKLECRSRTNGTITLTKEAVTDKTGSYKMEVTGDHEEEVCELVLVQSPDSGCSDVSTE 120

Query: 121 AEGRDRARVILTRYNGMASNE-RYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           A  R+ A++ LT  +G+ S+E R VN +GF    P++ C     +   + D
Sbjct: 121 AYLRNAAKISLTANDGIVSHETRIVNPLGFMVQTPLADCPAAFKELGIVPD 171

[Close]

BLAST of CmaCh05G004850 vs. NCBI nr
Match: gi|449465966|ref|XP_004150698.1| (PREDICTED: protein DOWNSTREAM OF FLC [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 6.2e-71
Identity = 135/159 (84.91%), Postives = 148/159 (93.08%), Query Frame = 1


Query: 1   MARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECK 60
           MAR  ILFALI+LPALA+ASRPVRTPF+VRGKVFCDTC+AGFETSATTYIPGAKV IECK
Sbjct: 1   MARVIILFALIMLPALALASRPVRTPFVVRGKVFCDTCLAGFETSATTYIPGAKVRIECK 60

Query: 61  DRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVIL 120
           DRN+MEL Y HEATTDSTGSY+LLVNEDH D++CDAVL+SSPQ+ CS  +EGRDRARVIL
Sbjct: 61  DRNSMELQYTHEATTDSTGSYTLLVNEDHGDELCDAVLVSSPQEKCSSVSEGRDRARVIL 120

Query: 121 TRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           TRYNG+ASNERYVNAMGFA  EPMSGCNQV+SQYQDIED
Sbjct: 121 TRYNGIASNERYVNAMGFAMDEPMSGCNQVMSQYQDIED 159

[Close]

BLAST of CmaCh05G004850 vs. NCBI nr
Match: gi|659089151|ref|XP_008445353.1| (PREDICTED: protein DOWNSTREAM OF FLC [Cucumis melo])

HSP 1 Score: 273.5 bits (698), Expect = 2.4e-70
Identity = 134/159 (84.28%), Postives = 148/159 (93.08%), Query Frame = 1


Query: 1   MARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECK 60
           MAR  ILFALI+LPALAVASRPVRTPF+VRGKVFCDTC+AGFETSATTYIPGAKV IECK
Sbjct: 1   MARLVILFALIMLPALAVASRPVRTPFVVRGKVFCDTCLAGFETSATTYIPGAKVRIECK 60

Query: 61  DRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVIL 120
           DRN+ME+ Y HEATTDSTGSY+LLV+EDH D++CDAVL+SSPQ+ CS  AEGRDRARVIL
Sbjct: 61  DRNSMEVRYTHEATTDSTGSYTLLVSEDHGDELCDAVLVSSPQEKCSSVAEGRDRARVIL 120

Query: 121 TRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           TRYNG+ASN+RYVNAMGFA  EPMSGCNQV+SQYQDIED
Sbjct: 121 TRYNGIASNDRYVNAMGFAIDEPMSGCNQVMSQYQDIED 159

[Close]

BLAST of CmaCh05G004850 vs. NCBI nr
Match: gi|1009136509|ref|XP_015885563.1| (PREDICTED: pollen-specific protein C13-like [Ziziphus jujuba])

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-53
Identity = 100/159 (62.89%), Postives = 129/159 (81.13%), Query Frame = 1


Query: 1   MARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECK 60
           MA+  +L AL +LPALA+A+RP+R P +V+G+V+CDTC+AGFETSA+ YI GAKV +ECK
Sbjct: 1   MAKLVLLLALCILPALALATRPLRKPLIVQGRVYCDTCLAGFETSASNYIAGAKVRLECK 60

Query: 61  DRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVIL 120
           +RNTM+LLY  E TTDSTG+Y + V EDHEDQ+CDA+L+SSPQ DC+  + GR+RARVIL
Sbjct: 61  NRNTMQLLYSKEGTTDSTGTYKITVTEDHEDQLCDALLVSSPQGDCAKVSPGRERARVIL 120

Query: 121 TRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           T YNGMAS  R+ NAMGF + EP +GC  VL QYQ+ ++
Sbjct: 121 TNYNGMASETRFANAMGFTKEEPAAGCANVLKQYQEFDN 159

[Close]

BLAST of CmaCh05G004850 vs. NCBI nr
Match: gi|596288682|ref|XP_007225977.1| (hypothetical protein PRUPE_ppa012675mg [Prunus persica])

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-53
Identity = 105/159 (66.04%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 1   MARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECK 60
           MA+  +LFAL +LPALAVA+RP+RTPF V GKVFCD C AGFETSATTYIPGA V +EC+
Sbjct: 1   MAKLIVLFALCVLPALAVATRPMRTPFTVEGKVFCDPCRAGFETSATTYIPGATVRLECR 60

Query: 61  DRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVIL 120
           DR TM++ Y  E  TDSTG+Y + V EDHEDQ CDAVL+SS QKDC+ AA GRDRARVIL
Sbjct: 61  DRKTMDIRYTKEGRTDSTGTYKIPVTEDHEDQFCDAVLVSSSQKDCAAAAPGRDRARVIL 120

Query: 121 TRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           T YNG+AS  R+ NAMGF + E +SGC Q+L Q Q+ ++
Sbjct: 121 TGYNGIASYNRFANAMGFMKNEAVSGCAQILKQLQEFDE 159

[Close]

BLAST of CmaCh05G004850 vs. NCBI nr
Match: gi|645256564|ref|XP_008234009.1| (PREDICTED: pollen-specific protein C13 [Prunus mume])

HSP 1 Score: 216.9 bits (551), Expect = 2.6e-53
Identity = 104/159 (65.41%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 1   MARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECK 60
           MA+  +LFAL +LPALAVA+RP+RTPF V GKV+CDTC AGFETSATTYIPGA V +EC+
Sbjct: 1   MAKLIVLFALCVLPALAVATRPMRTPFTVEGKVYCDTCRAGFETSATTYIPGATVRLECR 60

Query: 61  DRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVIL 120
           DR TM++ Y  E  TDSTG+Y + V EDHEDQ CDAVL+SS QKDC+ AA GRDRARVIL
Sbjct: 61  DRKTMDIRYTKEGRTDSTGTYKIPVTEDHEDQFCDAVLVSSSQKDCAAAAPGRDRARVIL 120

Query: 121 TRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           T YNG+AS  R+ NAMGF + E + GC Q+L Q Q+ ++
Sbjct: 121 TGYNGIASYNRFANAMGFMKNEAVPGCAQILKQLQEFDE 159

The following BLAST results are available for this feature:

BLAST of CmaCh05G004850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DFC_ARATH	5.9e-29	47.02	Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana GN=DFC PE=2 SV=1	[more]
PSC13_MAIZE	2.1e-26	38.06	Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1	[more]
PHLB_PHLPR	4.0e-25	43.28	Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1	[more]
LOLB_LOLPR	2.6e-24	42.64	Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1	[more]
CHE1_CHEAL	3.1e-22	39.35	Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1	[more]

BLAST of CmaCh05G004850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQA5_CUCSA	4.3e-71	84.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G309370 PE=4 SV=1	[more]
M5XNU1_PRUPE	1.1e-53	66.04	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012675mg PE=4 SV=1	[more]
Q2I307_VITPS	4.1e-53	64.15	Pollen-specific protein OS=Vitis pseudoreticulata PE=2 SV=1	[more]
A0A059BKH8_EUCGR	1.2e-52	65.41	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00490 PE=4 SV=1	[more]
E2LMG1_MONPE	3.5e-52	64.78	Uncharacterized protein OS=Moniliophthora perniciosa (strain FA553 / isolate CP0...	[more]

BLAST of CmaCh05G004850 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08685.1	5.3e-52	59.75	Pollen Ole e 1 allergen and extensin family protein	[more]
AT1G78040.1	1.0e-31	41.72	Pollen Ole e 1 allergen and extensin family protein	[more]
AT5G10130.1	3.3e-30	47.02	Pollen Ole e 1 allergen and extensin family protein	[more]
AT1G29140.1	3.3e-22	35.71	Pollen Ole e 1 allergen and extensin family protein	[more]
AT5G45880.1	2.2e-21	35.09	Pollen Ole e 1 allergen and extensin family protein	[more]

BLAST of CmaCh05G004850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465966\|ref\|XP_004150698.1\|	6.2e-71	84.91	PREDICTED: protein DOWNSTREAM OF FLC [Cucumis sativus]	[more]
gi\|659089151\|ref\|XP_008445353.1\|	2.4e-70	84.28	PREDICTED: protein DOWNSTREAM OF FLC [Cucumis melo]	[more]
gi\|1009136509\|ref\|XP_015885563.1\|	1.5e-53	62.89	PREDICTED: pollen-specific protein C13-like [Ziziphus jujuba]	[more]
gi\|596288682\|ref\|XP_007225977.1\|	1.5e-53	66.04	hypothetical protein PRUPE_ppa012675mg [Prunus persica]	[more]
gi\|645256564\|ref\|XP_008234009.1\|	2.6e-53	65.41	PREDICTED: pollen-specific protein C13 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0071840	cellular component organization or biogenesis
biological_process	GO:0009987	cellular process
biological_process	GO:0044699	single-organism process
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G004850.1	CmaCh05G004850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31614	FAMILY NOT NAMED	coord: 1..159 score: 1.5
None	No IPR available	PANTHER	PTHR31614:SF5	ALLERGEN-LIKE PROTEIN BRSN20-RELATED	coord: 1..159 score: 1.5
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_I	coord: 29..111 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh05G004850	Cucsa.154560	Cucumber (Gy14) v1	cgycmaB0426
CmaCh05G004850	Cla022079	Watermelon (97103) v1	cmawmB751
CmaCh05G004850	Csa2G309370	Cucumber (Chinese Long) v2	cmacuB794
CmaCh05G004850	MELO3C011368	Melon (DHL92) v3.5.1	cmameB724
CmaCh05G004850	ClCG08G010950	Watermelon (Charleston Gray)	cmawcgB709
CmaCh05G004850	CSPI02G15930	Wild cucumber (PI 183967)	cmacpiB803
CmaCh05G004850	CmoCh05G005070	Cucurbita moschata (Rifu)	cmacmoB786
CmaCh05G004850	CmoCh12G001130	Cucurbita moschata (Rifu)	cmacmoB765
CmaCh05G004850	Lsi08G009480	Bottle gourd (USVL1VR-Ls)	cmalsiB737
CmaCh05G004850	Cp4.1LG11g04260	Cucurbita pepo (Zucchini)	cmacpeB766
CmaCh05G004850	Cp4.1LG07g01110	Cucurbita pepo (Zucchini)	cmacpeB791
CmaCh05G004850	MELO3C011368.2	Melon (DHL92) v3.6.1	cmamedB817
CmaCh05G004850	CsaV3_1G022970	Cucumber (Chinese Long) v3	cmacucB0924
CmaCh05G004850	Cla97C08G153860	Watermelon (97103) v2	cmawmbB830
CmaCh05G004850	Bhi04G000607	Wax gourd	cmawgoB0937
CmaCh05G004850	CsGy2G016520	Cucumber (Gy14) v2	cgybcmaB260
CmaCh05G004850	Carg20552	Silver-seed gourd	carcmaB0921
CmaCh05G004850	Carg09226	Silver-seed gourd	carcmaB0189

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh05G004850	CmaCh12G001430	Cucurbita maxima (Rimu)	cmacmaB192

The following block(s) are covering this gene:

None