Cla97C08G153860 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C08G153860
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Pollen-specific protein
Location	Cla97Chr08 : 22014768 .. 22016765 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGATTTGTGATTCTCTTTGCTCTCTTTGTTCTTCCTTCACTCGCCGCCGCAAGCCGCCCCGTCAGAACTCCGTTCATTGTTCGTGGTAAAGTCTTCTGCGACACTTGCCTTGCCGGCTTTGAAACCTCCGCCACTACCTACATTCCCGGTATATACACTCTCTCTTTGTTTTCTAGTTCTCGGTTGCTGAAATCTCGCTATCCGTGCCTTTTATTGCTTTTTATGTAGACTGATCAATCGTTTTCTTGCTAGATCTGTGTTGTAGTTTAGAGGTTTTGTTGATTGGTGGCTTGCTTTCTAGTTTATTGGTGTGTTTTGATGGATTTGAAGTGGATTTGGTGTTTGGATCTTGACTACTGTCTGATGGCTTGTGGAAGAATAAGTTAGGGTTTTCGATATGATCATTATTGTTATTTTTTATTGGGACCTATGTTTGTTAATTAAGATATGTTTACTTTATTTTGTTTCTATGTCGTGCTTAACTTTTATTTTAAGCAGTATTTTATTCGATCTGTCCTCTTAGATTAATGGATAACTTTACATTAATGTTTTTCTTTTTAATGATTTTCGTAGGCTGAATCTTGACTGCTGTCTGGTGGTATGTGGATTAAGTTAGTGTTTAACTATAGGGATTATTTTAGTATATAATTCGCGTTTTAGATACGTGTATTTTTTATAAAAAAAAAAATTCAGGCCTAATCTTGGGGTTTAGTTAATTATAGGGGTGTATTTACTACATTTTCTTTCTATGTCGTGCTTAACTTTTATATTTTTAAGCAATAATTCTCTAGATCTGTCTCTATCTATTATCTATATGTCAAATCTGGATCTGGACATTGATTTTCTTTTGTCTTGTTGTTCTTCTCTTATGTGATCTGCTGTCTTTACATAATGTGTTCTATACATCCTCATCAACAGCTCATGAGGACCAAATTTTTATGGAAAAAACTATCAGTTTAAGCTTGAGCTTTTAGGTCTTGTAGCAATTTAAAGGTTAAAATTGTAAATTTGGTTCTTATGGTTTGGAAAGTTAGAATTTAGTCCCTATGTTTATAATTAGAATTTAATTCATATGATTGGGTAAAATACTCCTAAATAGTCCTTGTCATAGGGGCTATTTATGAAGGTTTCATCAAATCAGAGAGATTATGTATGAGGTTTTTATCAAACTCTAGTGACTAAATTCAAATTTTCTTCACATCATAGAGACCAAATTTGTAATTTAACGTACTTCAAAATTGTTCGAGTGAAGATCATGTGTTGAACCCATGCGGTGTCATCTTCTTTTCTTTTCTTTTAATATAATAGTTATATTCCATTTGTTGGGTCTTGGGCTAATTTCCAAGTTGAAAAGGAGGAGAGTGAGGTGGTTGGTGGATATTTGCTTCCAAATTCATTTCAATATCAGGAGATTTGAAACTCTAACATCTTTGGTCAAGGGTGTATGTGTTAACGAGTTGAGTTTATTGAGTTTAATAAATCATCACCATGTAGGGAGATATAACCATTTGATATGTCCCTAGCCCTTCTCTTGATTGGACTTGGATCTTAATTTAATCTACAAAGGCCTACATGTAGGTTATTTCGAAAAGAGGAGAGTAATATTTGAGAGTTTTGAGTTTTAACTTCATGCTTATAATGTGATGATTATTCAATTTCCTTGCAGGTGCTAAGGTCAAAATTGAATGCAAGGACAGGAACTCAATGGAACTTCTATATTCTCACGAGGCCACAACAGACTCCACTGGTTCTTATACGCTCTTAATCAACGAGGACCATGGGGATGAACTTTGTGATGCTGTACTAATCAGCAGCCCTGAGAAGAGCTGTTCATCAGTATCCGAAGGCCGTGACCGTGCCCGTGTGATCCTCACCCGCTACAATGGTATTGCCTCAAACGAACGCTATGTCAATGCCATGGGTTTTGCAAGAGATGAACCTATGTCTGGCTGCAACCAAGTCCTGAGTCAGTACCAGGATATTGAAGATTAG

mRNA sequence

ATGGCTCGATTTGTGATTCTCTTTGCTCTCTTTGTTCTTCCTTCACTCGCCGCCGCAAGCCGCCCCGTCAGAACTCCGTTCATTGTTCGTGGTAAAGTCTTCTGCGACACTTGCCTTGCCGGCTTTGAAACCTCCGCCACTACCTACATTCCCGGTGCTAAGGTCAAAATTGAATGCAAGGACAGGAACTCAATGGAACTTCTATATTCTCACGAGGCCACAACAGACTCCACTGGTTCTTATACGCTCTTAATCAACGAGGACCATGGGGATGAACTTTGTGATGCTGTACTAATCAGCAGCCCTGAGAAGAGCTGTTCATCAGTATCCGAAGGCCGTGACCGTGCCCGTGTGATCCTCACCCGCTACAATGGTATTGCCTCAAACGAACGCTATGTCAATGCCATGGGTTTTGCAAGAGATGAACCTATGTCTGGCTGCAACCAAGTCCTGAGTCAGTACCAGGATATTGAAGATTAG

Coding sequence (CDS)

ATGGCTCGATTTGTGATTCTCTTTGCTCTCTTTGTTCTTCCTTCACTCGCCGCCGCAAGCCGCCCCGTCAGAACTCCGTTCATTGTTCGTGGTAAAGTCTTCTGCGACACTTGCCTTGCCGGCTTTGAAACCTCCGCCACTACCTACATTCCCGGTGCTAAGGTCAAAATTGAATGCAAGGACAGGAACTCAATGGAACTTCTATATTCTCACGAGGCCACAACAGACTCCACTGGTTCTTATACGCTCTTAATCAACGAGGACCATGGGGATGAACTTTGTGATGCTGTACTAATCAGCAGCCCTGAGAAGAGCTGTTCATCAGTATCCGAAGGCCGTGACCGTGCCCGTGTGATCCTCACCCGCTACAATGGTATTGCCTCAAACGAACGCTATGTCAATGCCATGGGTTTTGCAAGAGATGAACCTATGTCTGGCTGCAACCAAGTCCTGAGTCAGTACCAGGATATTGAAGATTAG

Protein sequence

MARFVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECKDRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVILTRYNGIASNERYVNAMGFARDEPMSGCNQVLSQYQDIED

Homology

[Close]

BLAST of Cla97C08G153860 vs. NCBI nr
Match: XP_004150698.1 (PREDICTED: protein DOWNSTREAM OF FLC [Cucumis sativus] >KGN62176.1 hypothetical protein Csa_2G309370 [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 1.1e-76
Identity = 142/159 (89.31%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MARFVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECK 60
           MAR +ILFAL +LP+LA ASRPVRTPF+VRGKVFCDTCLAGFETSATTYIPGAKV+IECK
Sbjct: 1   MARVIILFALIMLPALALASRPVRTPFVVRGKVFCDTCLAGFETSATTYIPGAKVRIECK 60

Query: 61  DRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVIL 120
           DRNSMEL Y+HEATTDSTGSYTLL+NEDHGDELCDAVL+SSP++ CSSVSEGRDRARVIL
Sbjct: 61  DRNSMELQYTHEATTDSTGSYTLLVNEDHGDELCDAVLVSSPQEKCSSVSEGRDRARVIL 120

Query: 121 TRYNGIASNERYVNAMGFARDEPMSGCNQVLSQYQDIED 160
           TRYNGIASNERYVNAMGFA DEPMSGCNQV+SQYQDIED
Sbjct: 121 TRYNGIASNERYVNAMGFAMDEPMSGCNQVMSQYQDIED 159

[Close]

BLAST of Cla97C08G153860 vs. NCBI nr
Match: XP_008445353.1 (PREDICTED: protein DOWNSTREAM OF FLC [Cucumis melo])

HSP 1 Score: 290.4 bits (742), Expect = 3.6e-75
Identity = 139/159 (87.42%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MARFVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECK 60
           MAR VILFAL +LP+LA ASRPVRTPF+VRGKVFCDTCLAGFETSATTYIPGAKV+IECK
Sbjct: 1   MARLVILFALIMLPALAVASRPVRTPFVVRGKVFCDTCLAGFETSATTYIPGAKVRIECK 60

Query: 61  DRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVIL 120
           DRNSME+ Y+HEATTDSTGSYTLL++EDHGDELCDAVL+SSP++ CSSV+EGRDRARVIL
Sbjct: 61  DRNSMEVRYTHEATTDSTGSYTLLVSEDHGDELCDAVLVSSPQEKCSSVAEGRDRARVIL 120

Query: 121 TRYNGIASNERYVNAMGFARDEPMSGCNQVLSQYQDIED 160
           TRYNGIASN+RYVNAMGFA DEPMSGCNQV+SQYQDIED
Sbjct: 121 TRYNGIASNDRYVNAMGFAIDEPMSGCNQVMSQYQDIED 159

[Close]

BLAST of Cla97C08G153860 vs. NCBI nr
Match: XP_022962421.1 (protein DOWNSTREAM OF FLC-like [Cucurbita moschata])

HSP 1 Score: 284.3 bits (726), Expect = 2.6e-73
Identity = 138/159 (86.79%), Postives = 149/159 (93.71%), Query Frame = 0


Query: 1   MARFVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECK 60
           MARF ILFAL +LP+LA ASRPVRTPFIVRGKVFCDTC+AGFETSATTYIPGAKV IECK
Sbjct: 1   MARFAILFALILLPALAVASRPVRTPFIVRGKVFCDTCVAGFETSATTYIPGAKVGIECK 60

Query: 61  DRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVIL 120
           DRN+MELLY HEATTDSTGSY+LL+NEDH D++CDAVLISSP+K CS  +EGRDRARVIL
Sbjct: 61  DRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVIL 120

Query: 121 TRYNGIASNERYVNAMGFARDEPMSGCNQVLSQYQDIED 160
           TRYNG+ASNERYVNAMGFAR EPMSGCNQVLSQYQDIED
Sbjct: 121 TRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 159

[Close]

BLAST of Cla97C08G153860 vs. NCBI nr
Match: XP_023001897.1 (pollen-specific protein C13-like [Cucurbita maxima])

HSP 1 Score: 284.3 bits (726), Expect = 2.6e-73
Identity = 137/159 (86.16%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MARFVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECK 60
           MARFV+LFAL VLP+L AA+RPVRTPF+VRGKV+CDTCLAGFETSATTYIPGAKVKIECK
Sbjct: 1   MARFVVLFALCVLPALIAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60

Query: 61  DRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVIL 120
           +RN+MELLYS EATTDSTGSY+LL+NEDH D++CDA+LISSPEK CS+VSEGRDRARVIL
Sbjct: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL 120

Query: 121 TRYNGIASNERYVNAMGFARDEPMSGCNQVLSQYQDIED 160
           TRYNGIASN+RYVNAMGFAR+E +SGCNQVLSQYQDIED
Sbjct: 121 TRYNGIASNDRYVNAMGFARNEALSGCNQVLSQYQDIED 159

[Close]

BLAST of Cla97C08G153860 vs. NCBI nr
Match: XP_023536678.1 (protein DOWNSTREAM OF FLC-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.3 bits (726), Expect = 2.6e-73
Identity = 138/159 (86.79%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 1   MARFVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECK 60
           MARFVILFAL VLP+L AA+RPVRTPF+VRGKV+CDTCLAGFETSATTYIPGAKVKIECK
Sbjct: 1   MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60

Query: 61  DRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVIL 120
           +RN+MELLYS EATTDSTGSY+LL+NEDH D++CDA LISSPEK CS+VSEGRDRARVIL
Sbjct: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDASLISSPEKECSAVSEGRDRARVIL 120

Query: 121 TRYNGIASNERYVNAMGFARDEPMSGCNQVLSQYQDIED 160
           TR+NGIASN+RYVNAMGFARDE +SGCNQVLSQYQDIED
Sbjct: 121 TRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED 159

[Close]

BLAST of Cla97C08G153860 vs. TrEMBL
Match: tr|A0A0A0LQA5|A0A0A0LQA5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G309370 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 7.5e-77
Identity = 142/159 (89.31%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MARFVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECK 60
           MAR +ILFAL +LP+LA ASRPVRTPF+VRGKVFCDTCLAGFETSATTYIPGAKV+IECK
Sbjct: 1   MARVIILFALIMLPALALASRPVRTPFVVRGKVFCDTCLAGFETSATTYIPGAKVRIECK 60

Query: 61  DRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVIL 120
           DRNSMEL Y+HEATTDSTGSYTLL+NEDHGDELCDAVL+SSP++ CSSVSEGRDRARVIL
Sbjct: 61  DRNSMELQYTHEATTDSTGSYTLLVNEDHGDELCDAVLVSSPQEKCSSVSEGRDRARVIL 120

Query: 121 TRYNGIASNERYVNAMGFARDEPMSGCNQVLSQYQDIED 160
           TRYNGIASNERYVNAMGFA DEPMSGCNQV+SQYQDIED
Sbjct: 121 TRYNGIASNERYVNAMGFAMDEPMSGCNQVMSQYQDIED 159

[Close]

BLAST of Cla97C08G153860 vs. TrEMBL
Match: tr|A0A1S3BC11|A0A1S3BC11_CUCME (protein DOWNSTREAM OF FLC OS=Cucumis melo OX=3656 GN=LOC103488413 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.4e-75
Identity = 139/159 (87.42%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MARFVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECK 60
           MAR VILFAL +LP+LA ASRPVRTPF+VRGKVFCDTCLAGFETSATTYIPGAKV+IECK
Sbjct: 1   MARLVILFALIMLPALAVASRPVRTPFVVRGKVFCDTCLAGFETSATTYIPGAKVRIECK 60

Query: 61  DRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVIL 120
           DRNSME+ Y+HEATTDSTGSYTLL++EDHGDELCDAVL+SSP++ CSSV+EGRDRARVIL
Sbjct: 61  DRNSMEVRYTHEATTDSTGSYTLLVSEDHGDELCDAVLVSSPQEKCSSVAEGRDRARVIL 120

Query: 121 TRYNGIASNERYVNAMGFARDEPMSGCNQVLSQYQDIED 160
           TRYNGIASN+RYVNAMGFA DEPMSGCNQV+SQYQDIED
Sbjct: 121 TRYNGIASNDRYVNAMGFAIDEPMSGCNQVMSQYQDIED 159

[Close]

BLAST of Cla97C08G153860 vs. TrEMBL
Match: tr|Q2I307|Q2I307_VITPS (Pollen-specific protein OS=Vitis pseudoreticulata OX=231512 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 4.3e-56
Identity = 104/159 (65.41%), Postives = 129/159 (81.13%), Query Frame = 0


Query: 1   MARFVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECK 60
           M R ++L AL VLP+L +A RPV  PF+++G+V+CDTC AGFETSATTYI GAKV++ECK
Sbjct: 1   MGRLMLLVALCVLPALVSAGRPVSQPFVLQGRVYCDTCRAGFETSATTYIAGAKVRVECK 60

Query: 61  DRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVIL 120
           DRNSM+LLYS E  TDSTG+Y +++ EDH D+LCDAVL+SSP+  C+SV  GRDRA VIL
Sbjct: 61  DRNSMQLLYSIEGITDSTGTYKIMVTEDHEDQLCDAVLVSSPQSDCASVDPGRDRAAVIL 120

Query: 121 TRYNGIASNERYVNAMGFARDEPMSGCNQVLSQYQDIED 160
           TRYNGI S+ RY N+MGF +D PMS C Q+L QYQ+ ED
Sbjct: 121 TRYNGIVSDNRYANSMGFLKDHPMSECTQLLQQYQEFED 159

[Close]

BLAST of Cla97C08G153860 vs. TrEMBL
Match: tr|A5BPK1|A5BPK1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g05040 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.6e-55
Identity = 103/159 (64.78%), Postives = 128/159 (80.50%), Query Frame = 0


Query: 1   MARFVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECK 60
           M R ++L AL VLP+L +A RPV  PF+++G+V+CDTC AGFETSATTYI GAKV++ECK
Sbjct: 1   MGRLMLLVALCVLPALVSAGRPVSQPFVLQGRVYCDTCRAGFETSATTYIAGAKVRVECK 60

Query: 61  DRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVIL 120
           DRNSM+LLYS E  TDSTG+Y +++ ED  D+LCDAVL+SSP+  C+SV  GRDRA VIL
Sbjct: 61  DRNSMQLLYSIEGITDSTGTYKIMVTEDREDQLCDAVLVSSPQSDCASVDPGRDRAAVIL 120

Query: 121 TRYNGIASNERYVNAMGFARDEPMSGCNQVLSQYQDIED 160
           TRYNGI S+ RY N+MGF +D PMS C Q+L QYQ+ ED
Sbjct: 121 TRYNGIVSDNRYANSMGFLKDHPMSECTQLLQQYQEFED 159

[Close]

BLAST of Cla97C08G153860 vs. TrEMBL
Match: tr|A0A067KLM9|A0A067KLM9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11986 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-54
Identity = 103/159 (64.78%), Postives = 129/159 (81.13%), Query Frame = 0


Query: 1   MARFVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECK 60
           MAR V+L AL VLP++ +A+RP R PF V G+V+CDTC AGFET  TTYI GAKV++ECK
Sbjct: 1   MARLVLLLALCVLPAIVSAARPARNPFEVEGRVYCDTCRAGFETPKTTYIAGAKVRLECK 60

Query: 61  DRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVIL 120
           DR SMEL+YS E TTDSTG+Y + +++DH D+LCDAVL+SSP+K C S S GRDRARVIL
Sbjct: 61  DRKSMELVYSKEGTTDSTGTYKIYVDDDHADQLCDAVLVSSPKKDCRSPSSGRDRARVIL 120

Query: 121 TRYNGIASNERYVNAMGFARDEPMSGCNQVLSQYQDIED 160
           T YNGIASN+R+ NA+GF +D+  SGC ++L QYQ+ ED
Sbjct: 121 TSYNGIASNKRFANAIGFEKDDIESGCTELLRQYQEYED 159

[Close]

BLAST of Cla97C08G153860 vs. Swiss-Prot
Match: sp|Q9LX15|DFC_ARATH (Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=DFC PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.6e-29
Identity = 69/151 (45.70%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 4   FVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECKDRN 63
           FV L A+  +  L  A+  V TPF + G V+CDTC  GFET AT YI GA+V+I CKDR 
Sbjct: 5   FVPLIAVLCVLVLPLAAMAVGTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVCKDRV 64

Query: 64  SMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVILTRY 123
           +++      A T   G Y + +  D  D+ C A L+ SP   C     GR  A VILTR 
Sbjct: 65  TLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVILTRS 124

Query: 124 NGIASNERYVNAMGFARDEPMSGCNQVLSQY 155
           NG AS   Y NAMGF RDEP+ GC  +  +Y
Sbjct: 125 NGAASTRHYANAMGFFRDEPLRGCAALRKRY 155

[Close]

BLAST of Cla97C08G153860 vs. Swiss-Prot
Match: sp|P33050|PSC13_MAIZE (Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.6e-29
Identity = 61/148 (41.22%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 12  VLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECKDRNSMELLYSH 71
           V+ S AAA  P    ++++G+V+CDTC AGF T+ T YI GAKV++ECK   + +L  + 
Sbjct: 20  VVLSCAAADDPNLPDYVIQGRVYCDTCRAGFVTNVTEYIAGAKVRLECKHFGTGKLERAI 79

Query: 72  EATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVILTRYNGIASNER 131
           +  TD+TG+YT+ + + H +++C  VL++SP K C  V   RDRA V+LTR  GI+ + R
Sbjct: 80  DGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNVGISDSLR 139

Query: 132 YVNAMGFARDEPMSGCNQVLSQYQDIED 160
             N +G+ +D P+  C  +L Q    +D
Sbjct: 140 PANPLGYFKDVPLPVCAALLKQLDSDDD 167

[Close]

BLAST of Cla97C08G153860 vs. Swiss-Prot
Match: sp|Q8H6L7|PHLB_PHLPR (Pollen allergen Phl p 11 OS=Phleum pratense OX=15957 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-26
Identity = 60/134 (44.78%), Postives = 82/134 (61.19%), Query Frame = 0


Query: 27  FIVRGKVFCDTCLAGFETSATTYIPGAKVKIECKDRNSMELLYSHEATTDSTGSYTLLIN 86
           F+V G+V+CD C AGFET+ +  + GA V ++C+  N  E     EATTD  G Y + I+
Sbjct: 6   FVVTGRVYCDPCRAGFETNVSHNVQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEID 65

Query: 87  EDHGDELCDAVLISSPEKSCSSVSEGRDRARVILTRYNGIASNE-RYVNAMGFARDEPMS 146
           +DH +E+C+ VL  SP+ +CS + E RDRARV LT  NGI     RY N + F R EP+ 
Sbjct: 66  QDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPLK 125

Query: 147 GCNQVLSQYQDIED 160
            C  +L  Y D+ D
Sbjct: 126 ECGGILQAY-DLRD 138

[Close]

BLAST of Cla97C08G153860 vs. Swiss-Prot
Match: sp|Q7M1X5|LOLB_LOLPR (Major pollen allergen Lol p 11 OS=Lolium perenne OX=4522 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.6e-26
Identity = 58/129 (44.96%), Postives = 79/129 (61.24%), Query Frame = 0


Query: 27  FIVRGKVFCDTCLAGFETSATTYIPGAKVKIECKDRNSMELLYSHEATTDSTGSYTLLIN 86
           F+V G+V+CD C AGFET+ +  + GA V ++C+  +  E     EATTD  G Y + I+
Sbjct: 6   FVVTGRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKIEID 65

Query: 87  EDHGDELCDAVLISSPEKSCSSVSEGRDRARVILTRYNGIASNE-RYVNAMGFARDEPMS 146
           +DH +E+C+ VL  SP+KSCS + E RDRARV LT   GI     RY N + F R EP+ 
Sbjct: 66  QDHQEEICEVVLAKSPDKSCSEIEEFRDRARVPLTSNXGIKQQGIRYANPIAFFRKEPLK 125

Query: 147 GCNQVLSQY 155
            C  +L  Y
Sbjct: 126 ECGGILQAY 134

[Close]

BLAST of Cla97C08G153860 vs. Swiss-Prot
Match: sp|Q8LGR0|CHE1_CHEAL (Pollen allergen Che a 1 OS=Chenopodium album OX=3559 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.8e-24
Identity = 62/155 (40.00%), Postives = 89/155 (57.42%), Query Frame = 0


Query: 2   ARFVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECKD 61
           A F+++ AL VL SLA  +      F V+G V+CDTC   F T  +T + GA VK+EC++
Sbjct: 6   AVFLLVGALCVL-SLAGVANAAENHFKVQGMVYCDTCRIQFMTRISTIMEGATVKLECRN 65

Query: 62  RNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSE---GRDRARV 121
             +    +  EA TD  G Y++ +N D  D++C+  L+ SP   CS VS     +  A+V
Sbjct: 66  ITAGTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQSAKV 125

Query: 122 ILTRYNGIASNERYVNAMGFARDEPMSGCNQVLSQ 154
            LT  NG AS+ R  NA+GF R EP+  C +VL +
Sbjct: 126 SLTSNNGEASDIRSANALGFMRKEPLKECPEVLKE 159

[Close]

BLAST of Cla97C08G153860 vs. TAIR10
Match: AT4G08685.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-54
Identity = 97/159 (61.01%), Postives = 125/159 (78.62%), Query Frame = 0


Query: 1   MARFVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECK 60
           M++ V+L AL  LP+LA A+RP + PF+VRG+V+CDTCLAGFET A+TYI GA V++ECK
Sbjct: 1   MSKAVLLVALCFLPALAIAARPNKNPFVVRGRVYCDTCLAGFETPASTYISGAVVRLECK 60

Query: 61  DRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVIL 120
           DR +MEL YSHEA TDSTGSY +L+NEDH ++ CDA+L+ S +  CS+VS G DRARV L
Sbjct: 61  DRRTMELTYSHEARTDSTGSYKILVNEDHDEQFCDAMLVRSSQLRCSNVSPGHDRARVTL 120

Query: 121 TRYNGIASNERYVNAMGFARDEPMSGCNQVLSQYQDIED 160
           TR+NGIAS++R+ N MGF RD  M GC  ++  YQ+ ED
Sbjct: 121 TRFNGIASDDRFANNMGFLRDAAMPGCADIMKLYQETED 159

[Close]

BLAST of Cla97C08G153860 vs. TAIR10
Match: AT1G78040.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 142.9 bits (359), Expect = 1.7e-34
Identity = 68/163 (41.72%), Postives = 107/163 (65.64%), Query Frame = 0


Query: 1   MARFVILFALFVLPSLAAASRP---VRTPFIVRGKVFCDTCLAGFETSATTY-IPGAKVK 60
           MA+ V+L  L +LP++A A+R     +   +V+G  +CD C  GFET  ++Y IPGA VK
Sbjct: 1   MAKLVMLLVLCILPAIAMAARRGNIGKNTMVVQGSTYCDICKFGFETPESSYFIPGATVK 60

Query: 61  IECKDRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRA 120
           + CKDR +ME +Y+ +A +D  G Y  ++++DH D++CD +L+ S +K+CS +S GR+++
Sbjct: 61  LSCKDRKTMEEVYTDKAVSDKEGKYKFIVHDDHRDQMCDVLLVKSSDKTCSKISVGREKS 120

Query: 121 RVILTRYNGIASNERYVNAMGFARDEPMSGCNQVLSQYQDIED 160
           RVIL  Y+GIAS  R+ N MGF ++     C+ +  +Y   ED
Sbjct: 121 RVILNHYSGIASQIRHANNMGFEKEVSDVFCSALFQKYMVDED 163

[Close]

BLAST of Cla97C08G153860 vs. TAIR10
Match: AT5G10130.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 130.6 bits (327), Expect = 8.7e-31
Identity = 69/151 (45.70%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 4   FVILFALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKVKIECKDRN 63
           FV L A+  +  L  A+  V TPF + G V+CDTC  GFET AT YI GA+V+I CKDR 
Sbjct: 5   FVPLIAVLCVLVLPLAAMAVGTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVCKDRV 64

Query: 64  SMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEGRDRARVILTRY 123
           +++      A T   G Y + +  D  D+ C A L+ SP   C     GR  A VILTR 
Sbjct: 65  TLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVILTRS 124

Query: 124 NGIASNERYVNAMGFARDEPMSGCNQVLSQY 155
           NG AS   Y NAMGF RDEP+ GC  +  +Y
Sbjct: 125 NGAASTRHYANAMGFFRDEPLRGCAALRKRY 155

[Close]

BLAST of Cla97C08G153860 vs. TAIR10
Match: AT1G29140.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-25
Identity = 62/168 (36.90%), Postives = 93/168 (55.36%), Query Frame = 0


Query: 1   MARFVILF-----ALFVLPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPGAKV 60
           MA+F I+F         L    AA       F ++G V+CDTC   F T  + ++ GAKV
Sbjct: 1   MAKFFIVFLASALCFTTLVHFTAADADDFDKFHIKGSVYCDTCRVQFITRISKFLEGAKV 60

Query: 61  KIECKDRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEG--- 120
           K+ECK R +  +  + EA TD+ G+Y + +  DH +E+C+ VL+ SP+  C  V+     
Sbjct: 61  KLECKGRENQTVTLTKEAVTDNAGNYQMEVMGDHEEEVCEIVLLQSPDPECGDVNNQEFL 120

Query: 121 RDRARVILTRYNGIASNE-RYVNAMGFARDEPMSGCNQVLSQYQDIED 160
           R+ AR+ LT  +GI SNE R +N +GF R  P++ C QV  +   + D
Sbjct: 121 RNAARISLTANDGIVSNETRTINPLGFMRKTPLAECPQVFKELGIVPD 168

[Close]

BLAST of Cla97C08G153860 vs. TAIR10
Match: AT5G45880.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24
Identity = 63/171 (36.84%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 1   MARFVILFALFV--------LPSLAAASRPVRTPFIVRGKVFCDTCLAGFETSATTYIPG 60
           MA   I F+ FV        L   AAA       F ++G V+CDTC   F T  + ++ G
Sbjct: 1   MASKAIFFSFFVVSAVCLSSLAGFAAADADDFDRFQIQGSVYCDTCRVQFVTRLSKFLEG 60

Query: 61  AKVKIECKDRNSMELLYSHEATTDSTGSYTLLINEDHGDELCDAVLISSPEKSCSSVSEG 120
           AKVK+EC+ R +  +  + EA TD TGSY + +  DH +E+C+ VL+ SP+  CS VS  
Sbjct: 61  AKVKLECRSRTNGTITLTKEAVTDKTGSYKMEVTGDHEEEVCELVLVQSPDSGCSDVSTE 120

Query: 121 ---RDRARVILTRYNGIASNE-RYVNAMGFARDEPMSGCNQVLSQYQDIED 160
              R+ A++ LT  +GI S+E R VN +GF    P++ C     +   + D
Sbjct: 121 AYLRNAAKISLTANDGIVSHETRIVNPLGFMVQTPLADCPAAFKELGIVPD 171

The following BLAST results are available for this feature:

BLAST of Cla97C08G153860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150698.1	1.1e-76	89.31	PREDICTED: protein DOWNSTREAM OF FLC [Cucumis sativus] >KGN62176.1 hypothetical ...	[more]
XP_008445353.1	3.6e-75	87.42	PREDICTED: protein DOWNSTREAM OF FLC [Cucumis melo]	[more]
XP_022962421.1	2.6e-73	86.79	protein DOWNSTREAM OF FLC-like [Cucurbita moschata]	[more]
XP_023001897.1	2.6e-73	86.16	pollen-specific protein C13-like [Cucurbita maxima]	[more]
XP_023536678.1	2.6e-73	86.79	protein DOWNSTREAM OF FLC-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C08G153860 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LQA5\|A0A0A0LQA5_CUCSA	7.5e-77	89.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G309370 PE=4 SV=1	[more]
tr\|A0A1S3BC11\|A0A1S3BC11_CUCME	2.4e-75	87.42	protein DOWNSTREAM OF FLC OS=Cucumis melo OX=3656 GN=LOC103488413 PE=4 SV=1	[more]
tr\|Q2I307\|Q2I307_VITPS	4.3e-56	65.41	Pollen-specific protein OS=Vitis pseudoreticulata OX=231512 PE=2 SV=1	[more]
tr\|A5BPK1\|A5BPK1_VITVI	3.6e-55	64.78	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g05040 PE=4 SV=...	[more]
tr\|A0A067KLM9\|A0A067KLM9_JATCU	1.1e-54	64.78	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11986 PE=4 SV=1	[more]

BLAST of Cla97C08G153860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LX15\|DFC_ARATH	1.6e-29	45.70	Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=DFC PE=2 SV=1	[more]
sp\|P33050\|PSC13_MAIZE	4.6e-29	41.22	Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1	[more]
sp\|Q8H6L7\|PHLB_PHLPR	1.2e-26	44.78	Pollen allergen Phl p 11 OS=Phleum pratense OX=15957 PE=1 SV=1	[more]
sp\|Q7M1X5\|LOLB_LOLPR	3.6e-26	44.96	Major pollen allergen Lol p 11 OS=Lolium perenne OX=4522 PE=1 SV=1	[more]
sp\|Q8LGR0\|CHE1_CHEAL	5.8e-24	40.00	Pollen allergen Che a 1 OS=Chenopodium album OX=3559 PE=1 SV=1	[more]

BLAST of Cla97C08G153860 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08685.1	1.5e-54	61.01	Pollen Ole e 1 allergen and extensin family protein	[more]
AT1G78040.1	1.7e-34	41.72	Pollen Ole e 1 allergen and extensin family protein	[more]
AT5G10130.1	8.7e-31	45.70	Pollen Ole e 1 allergen and extensin family protein	[more]
AT1G29140.1	2.5e-25	36.90	Pollen Ole e 1 allergen and extensin family protein	[more]
AT5G45880.1	1.2e-24	36.84	Pollen Ole e 1 allergen and extensin family protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0071840	cellular component organization or biogenesis
biological_process	GO:0009987	cellular process
biological_process	GO:0044699	single-organism process
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C08G153860.1	Cla97C08G153860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_I	coord: 29..112 e-value: 6.1E-17 score: 61.7
None	No IPR available	PANTHER	PTHR31614	FAMILY NOT NAMED	coord: 1..159
None	No IPR available	PANTHER	PTHR31614:SF5	ALLERGEN-LIKE PROTEIN BRSN20-RELATED	coord: 1..159

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C08G153860	Cla022079	Watermelon (97103) v1	wmwmbB100
Cla97C08G153860	Csa2G309370	Cucumber (Chinese Long) v2	cuwmbB165
Cla97C08G153860	MELO3C011368	Melon (DHL92) v3.5.1	mewmbB303
Cla97C08G153860	ClCG08G010950	Watermelon (Charleston Gray)	wcgwmbB336
Cla97C08G153860	CSPI02G15930	Wild cucumber (PI 183967)	cpiwmbB168
Cla97C08G153860	Cucsa.154560	Cucumber (Gy14) v1	cgywmbB260
Cla97C08G153860	CmaCh05G004850	Cucurbita maxima (Rimu)	cmawmbB830
Cla97C08G153860	CmaCh12G001430	Cucurbita maxima (Rimu)	cmawmbB195
Cla97C08G153860	CmoCh12G001130	Cucurbita moschata (Rifu)	cmowmbB179
Cla97C08G153860	CmoCh05G005070	Cucurbita moschata (Rifu)	cmowmbB800
Cla97C08G153860	Lsi08G009480	Bottle gourd (USVL1VR-Ls)	lsiwmbB444
Cla97C08G153860	CsGy2G016520	Cucumber (Gy14) v2	cgybwmbB158
Cla97C08G153860	MELO3C011368.2	Melon (DHL92) v3.6.1	medwmbB290
Cla97C08G153860	Carg09226	Silver-seed gourd	carwmbB0150
Cla97C08G153860	Carg20552	Silver-seed gourd	carwmbB0679
Cla97C08G153860	CsaV3_1G022970	Cucumber (Chinese Long) v3	cucwmbB087
Cla97C08G153860	Bhi04G000607	Wax gourd	wgowmbB315

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None