Carg20552 (gene) Silver-seed gourd

Overview
NameCarg20552
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPollen-specific protein
LocationCucurbita_argyrosperma_scaffold_113 : 235585 .. 237457 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCACTTTACTCTTCATTATTAAAAACCTTACGCTTCATTTTCCCTTCGTCAGTTTTCATCTTCCTTTCCCATTTCTCTGATTTTCTCGAAGAAATCAAATCCATGGCGCGATTTGTGATTCTCTTTGCTCTCTGTGTGCTTCCCGCACTCGTCGCCGCTACCCGCCCCGTCAGGACTCCGTTTGTTGTTCGTGGTAAAGTCTACTGTGATACTTGTCTTGCCGGCTTCGAAACCTCCGCCACTACCTACATTCCCGGTATCTTCTTTCTCTCTATGCTTTGTTGTTGTTGATCGTTGAAATATCACCGATATTTTCCGGATTTTGCTTTGATTTCGTTGTTTTTGTGCGAGATGCGTAGTGGTTGATGAATGTGGATGTATTTTGTTGTTGTCTGCTTCGTGTTCCTTCTAGATCTCTGTTGTAGTGAGAGGTTCTGTTGGTTAGTGGTTTGCTTGCTAGTTTTATGGAGTATGAGATTGATTTGTTGTGGATTTGGTGTCTCGATCTTGACTACTGTCTGATGCCATGTGGAATAAGCCAGCGTTTAACTATATGGATTAGTTTAGTCCTAATTCTCATGTTTGGTGCGTGTATTTTTTTAATCGAGGCCTGATCTGGAGCTTAAGTTAGTCAATGGCTCTTTCTGGTTGTGAGAAACGGGATTTATTTTTGTTTATTAAGATTTGATTACTTTATTCTCTATCTACATCGTGCACAACTTTTATTTTAAGCATTAATTTTAAACATGTTCGCTTACACTAATATTCTTTCTATTGATTCTGTATTTAAAGTTTCTGATTCCATTTTACGTCGAGTGTCTATCTGGATAAACGTCTCTAATTCCATTCGAATTACTCCAGGTTTCTGTCTGGTGTTCCATCTGCTATGTGGAATCTGGATAGTGATTCAGTTTTCTCTTGTTGTTCTTCTTATGTGATTTTCTTTCTTTACGTAAGTTGTGTTCAAAATAACATCCACTTCTCACGATCCCCGTTTGCAGTCATTGTTTGTCTTAGAAGATTAAATAAGCCTAACCTATCAGTTTAAGCTCAAGAATTTAGGTCTTGAAATAATTTAAAATGGTTGTAGGGTAAAAGATCTTGTGTTTGACCCATTTAGTGTCTTCTTTTTTTCTTTTCTTCTCCATTTGTTAGTTCTTGGGCAAAATTTCTAGCCCATAATGGAGGATACTAAGGTGCTTAGGATATCAACACCCAAATTCATTTCTAATTACTGAATTGTGTAAAATTAAGGAACCAAATAGAAATTTGAGCTAATTTCAAATAGAAAGACAACTGAGATATAGCCCACATCCACCAAGGAGCTAACTAATCTTAATGTCAATCTTGCACAATATAATCAAACGCTCTGTCTTTTGCATCATGGTTTAGTGGGTTGGATTAATGTATTCTTGTATTAAATCATCACCAAATCCCTATCTTGATTTGGTTTAGGATATAAATTTAATCTACATAGTTATATATGTAGGTTAGCTTAGTTCACGGATATAAACTTATCTCTCAATTATGCAATTTCCTTGTAGGTGCTAAGGTCAAAATCGAATGCAAGAACAGGAACACCATGGAACTTCTCTACAGCCAAGAGGCCACAACAGACTCCACTGGTTCTTACTCACTCTTAGTCAACGAGGACCACGAGGACCAAGTTTGTGATGCTTTGCTAATCAGCAGCCCTGAGAAGGAGTGCTCGGCAGTATCTGAAGGCCGTGACCGTGCCCGTGTGATCCTCACCCGCTTCAATGGCATTGCCTCAAACGACCGTTATGTCAATGCCATGGGATTTGCAAGAGATGAAGCTTTGTCTGGCTGCAACCAAGTCCTCAGCCAATACCAGGACATCGAAGATTAG

mRNA sequence

CTTTCACTTTACTCTTCATTATTAAAAACCTTACGCTTCATTTTCCCTTCGTCAGTTTTCATCTTCCTTTCCCATTTCTCTGATTTTCTCGAAGAAATCAAATCCATGGCGCGATTTGTGATTCTCTTTGCTCTCTGTGTGCTTCCCGCACTCGTCGCCGCTACCCGCCCCGTCAGGACTCCGTTTGTTGTTCGTGGTAAAGTCTACTGTGATACTTGTCTTGCCGGCTTCGAAACCTCCGCCACTACCTACATTCCCGGTGCTAAGGTCAAAATCGAATGCAAGAACAGGAACACCATGGAACTTCTCTACAGCCAAGAGGCCACAACAGACTCCACTGGTTCTTACTCACTCTTAGTCAACGAGGACCACGAGGACCAAGTTTGTGATGCTTTGCTAATCAGCAGCCCTGAGAAGGAGTGCTCGGCAGTATCTGAAGGCCGTGACCGTGCCCGTGTGATCCTCACCCGCTTCAATGGCATTGCCTCAAACGACCGTTATGTCAATGCCATGGGATTTGCAAGAGATGAAGCTTTGTCTGGCTGCAACCAAGTCCTCAGCCAATACCAGGACATCGAAGATTAG

Coding sequence (CDS)

ATGGCGCGATTTGTGATTCTCTTTGCTCTCTGTGTGCTTCCCGCACTCGTCGCCGCTACCCGCCCCGTCAGGACTCCGTTTGTTGTTCGTGGTAAAGTCTACTGTGATACTTGTCTTGCCGGCTTCGAAACCTCCGCCACTACCTACATTCCCGGTGCTAAGGTCAAAATCGAATGCAAGAACAGGAACACCATGGAACTTCTCTACAGCCAAGAGGCCACAACAGACTCCACTGGTTCTTACTCACTCTTAGTCAACGAGGACCACGAGGACCAAGTTTGTGATGCTTTGCTAATCAGCAGCCCTGAGAAGGAGTGCTCGGCAGTATCTGAAGGCCGTGACCGTGCCCGTGTGATCCTCACCCGCTTCAATGGCATTGCCTCAAACGACCGTTATGTCAATGCCATGGGATTTGCAAGAGATGAAGCTTTGTCTGGCTGCAACCAAGTCCTCAGCCAATACCAGGACATCGAAGATTAG

Protein sequence

MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECKNRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVILTRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED
Homology
[Close]
BLAST of Carg20552 vs. NCBI nr
Match: XP_023536678.1 (protein DOWNSTREAM OF FLC-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.8 bits (800), Expect = 6.9e-82
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1   MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60
           MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK
Sbjct: 1   MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60

Query: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL 120
           NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDA LISSPEKECSAVSEGRDRARVIL
Sbjct: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDASLISSPEKECSAVSEGRDRARVIL 120

Query: 121 TRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED 160
           TRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED
Sbjct: 121 TRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED 159

[Close]
BLAST of Carg20552 vs. NCBI nr
Match: XP_023001897.1 (pollen-specific protein C13-like [Cucurbita maxima])

HSP 1 Score: 311.2 bits (796), Expect = 2.0e-81
Identity = 155/159 (97.48%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 1   MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60
           MARFV+LFALCVLPAL+AATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK
Sbjct: 1   MARFVVLFALCVLPALIAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60

Query: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL 120
           NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL
Sbjct: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL 120

Query: 121 TRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED 160
           TR+NGIASNDRYVNAMGFAR+EALSGCNQVLSQYQDIED
Sbjct: 121 TRYNGIASNDRYVNAMGFARNEALSGCNQVLSQYQDIED 159

[Close]
BLAST of Carg20552 vs. NCBI nr
Match: XP_022951574.1 (pollen-specific protein C13-like [Cucurbita moschata])

HSP 1 Score: 310.8 bits (795), Expect = 2.6e-81
Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1   MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60
           MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK
Sbjct: 1   MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60

Query: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL 120
           NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL
Sbjct: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL 120

Query: 121 TRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED 160
           TRFNGIAS DRYVNAMGFARDEAL+GCNQVLSQYQDIED
Sbjct: 121 TRFNGIASYDRYVNAMGFARDEALAGCNQVLSQYQDIED 159

[Close]
BLAST of Carg20552 vs. NCBI nr
Match: XP_022132052.1 (pollen-specific protein C13-like [Momordica charantia])

HSP 1 Score: 287.0 bits (733), Expect = 4.0e-74
Identity = 139/159 (87.42%), Postives = 153/159 (96.23%), Query Frame = 0 

Query: 1   MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60
           MARF +LFALCVLPALVAA+RPVRTPFVVRGKVYCDTCLAGFETSATTYI GAKVK+ECK
Sbjct: 1   MARFALLFALCVLPALVAASRPVRTPFVVRGKVYCDTCLAGFETSATTYIHGAKVKVECK 60

Query: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL 120
           NRNTMELLYSQEATTDS+GSY+LLVNEDH+DQVCDA+L+SSP+K CS++SEGRDRARVIL
Sbjct: 61  NRNTMELLYSQEATTDSSGSYTLLVNEDHDDQVCDAVLVSSPQKGCSSISEGRDRARVIL 120

Query: 121 TRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED 160
           TR+NGIASNDR+VNAMGFARDE +SGCNQVL QY DIED
Sbjct: 121 TRYNGIASNDRFVNAMGFARDEVMSGCNQVLRQYLDIED 159

[Close]
BLAST of Carg20552 vs. NCBI nr
Match: XP_022962421.1 (protein DOWNSTREAM OF FLC-like [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 2.1e-70
Identity = 134/159 (84.28%), Postives = 148/159 (93.08%), Query Frame = 0 

Query: 1   MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60
           MARF ILFAL +LPAL  A+RPVRTPF+VRGKV+CDTC+AGFETSATTYIPGAKV IECK
Sbjct: 1   MARFAILFALILLPALAVASRPVRTPFIVRGKVFCDTCVAGFETSATTYIPGAKVGIECK 60

Query: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL 120
           +RNTMELLY  EATTDSTGSYSLLVNEDHEDQVCDA+LISSP+K+CS  +EGRDRARVIL
Sbjct: 61  DRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVIL 120

Query: 121 TRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED 160
           TR+NG+ASN+RYVNAMGFAR E +SGCNQVLSQYQDIED
Sbjct: 121 TRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 159

[Close]
BLAST of Carg20552 vs. TAIR10
Match: AT4G08685.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 214.9 bits (546), Expect = 3.5e-56
Identity = 103/159 (64.78%), Postives = 124/159 (77.99%), Query Frame = 0 

Query: 1   MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60
           M++ V+L ALC LPAL  A RP + PFVVRG+VYCDTCLAGFET A+TYI GA V++ECK
Sbjct: 1   MSKAVLLVALCFLPALAIAARPNKNPFVVRGRVYCDTCLAGFETPASTYISGAVVRLECK 60

Query: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL 120
           +R TMEL YS EA TDSTGSY +LVNEDH++Q CDA+L+ S +  CS VS G DRARV L
Sbjct: 61  DRRTMELTYSHEARTDSTGSYKILVNEDHDEQFCDAMLVRSSQLRCSNVSPGHDRARVTL 120

Query: 121 TRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED 160
           TRFNGIAS+DR+ N MGF RD A+ GC  ++  YQ+ ED
Sbjct: 121 TRFNGIASDDRFANNMGFLRDAAMPGCADIMKLYQETED 159

[Close]
BLAST of Carg20552 vs. TAIR10
Match: AT1G78040.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 147.1 bits (370), Expect = 9.0e-36
Identity = 73/163 (44.79%), Postives = 106/163 (65.03%), Query Frame = 0 

Query: 1   MARFVILFALCVLPALVAATRP---VRTPFVVRGKVYCDTCLAGFETSATTY-IPGAKVK 60
           MA+ V+L  LC+LPA+  A R     +   VV+G  YCD C  GFET  ++Y IPGA VK
Sbjct: 1   MAKLVMLLVLCILPAIAMAARRGNIGKNTMVVQGSTYCDICKFGFETPESSYFIPGATVK 60

Query: 61  IECKNRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRA 120
           + CK+R TME +Y+ +A +D  G Y  +V++DH DQ+CD LL+ S +K CS +S GR+++
Sbjct: 61  LSCKDRKTMEEVYTDKAVSDKEGKYKFIVHDDHRDQMCDVLLVKSSDKTCSKISVGREKS 120

Query: 121 RVILTRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED 160
           RVIL  ++GIAS  R+ N MGF ++ +   C+ +  +Y   ED
Sbjct: 121 RVILNHYSGIASQIRHANNMGFEKEVSDVFCSALFQKYMVDED 163

[Close]
BLAST of Carg20552 vs. TAIR10
Match: AT5G10130.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 129.0 bits (323), Expect = 2.5e-30
Identity = 72/151 (47.68%), Postives = 85/151 (56.29%), Query Frame = 0 

Query: 4   FVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECKNRN 63
           FV L A+  +  L  A   V TPF + G VYCDTC  GFET AT YI GA+V+I CK+R 
Sbjct: 5   FVPLIAVLCVLVLPLAAMAVGTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVCKDRV 64

Query: 64  TMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVILTRF 123
           T++      A T   G Y + V  D +DQ C A L+ SP   C     GR  A VILTR 
Sbjct: 65  TLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVILTRS 124

Query: 124 NGIASNDRYVNAMGFARDEALSGCNQVLSQY 155
           NG AS   Y NAMGF RDE L GC  +  +Y
Sbjct: 125 NGAASTRHYANAMGFFRDEPLRGCAALRKRY 155

[Close]
BLAST of Carg20552 vs. TAIR10
Match: AT1G29140.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 114.4 bits (285), Expect = 6.5e-26
Identity = 67/168 (39.88%), Postives = 97/168 (57.74%), Query Frame = 0 

Query: 1   MARFVILF---ALC--VLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKV 60
           MA+F I+F   ALC   L    AA       F ++G VYCDTC   F T  + ++ GAKV
Sbjct: 1   MAKFFIVFLASALCFTTLVHFTAADADDFDKFHIKGSVYCDTCRVQFITRISKFLEGAKV 60

Query: 61  KIECKNRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEG--- 120
           K+ECK R    +  ++EA TD+ G+Y + V  DHE++VC+ +L+ SP+ EC  V+     
Sbjct: 61  KLECKGRENQTVTLTKEAVTDNAGNYQMEVMGDHEEEVCEIVLLQSPDPECGDVNNQEFL 120

Query: 121 RDRARVILTRFNGIASND-RYVNAMGFARDEALSGCNQVLSQYQDIED 160
           R+ AR+ LT  +GI SN+ R +N +GF R   L+ C QV  +   + D
Sbjct: 121 RNAARISLTANDGIVSNETRTINPLGFMRKTPLAECPQVFKELGIVPD 168

[Close]
BLAST of Carg20552 vs. TAIR10
Match: AT5G45880.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23
Identity = 60/162 (37.04%), Postives = 92/162 (56.79%), Query Frame = 0 

Query: 4   FVILFALCV--LPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECKN 63
           F ++ A+C+  L    AA       F ++G VYCDTC   F T  + ++ GAKVK+EC++
Sbjct: 10  FFVVSAVCLSSLAGFAAADADDFDRFQIQGSVYCDTCRVQFVTRLSKFLEGAKVKLECRS 69

Query: 64  RNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEG---RDRARV 123
           R    +  ++EA TD TGSY + V  DHE++VC+ +L+ SP+  CS VS     R+ A++
Sbjct: 70  RTNGTITLTKEAVTDKTGSYKMEVTGDHEEEVCELVLVQSPDSGCSDVSTEAYLRNAAKI 129

Query: 124 ILTRFNGIASND-RYVNAMGFARDEALSGCNQVLSQYQDIED 160
            LT  +GI S++ R VN +GF     L+ C     +   + D
Sbjct: 130 SLTANDGIVSHETRIVNPLGFMVQTPLADCPAAFKELGIVPD 171

[Close]
BLAST of Carg20552 vs. Swiss-Prot
Match: sp|Q9LX15|DFC_ARATH (Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=DFC PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.6e-29
Identity = 72/151 (47.68%), Postives = 85/151 (56.29%), Query Frame = 0 

Query: 4   FVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECKNRN 63
           FV L A+  +  L  A   V TPF + G VYCDTC  GFET AT YI GA+V+I CK+R 
Sbjct: 5   FVPLIAVLCVLVLPLAAMAVGTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVCKDRV 64

Query: 64  TMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVILTRF 123
           T++      A T   G Y + V  D +DQ C A L+ SP   C     GR  A VILTR 
Sbjct: 65  TLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVILTRS 124

Query: 124 NGIASNDRYVNAMGFARDEALSGCNQVLSQY 155
           NG AS   Y NAMGF RDE L GC  +  +Y
Sbjct: 125 NGAASTRHYANAMGFFRDEPLRGCAALRKRY 155

[Close]
BLAST of Carg20552 vs. Swiss-Prot
Match: sp|P33050|PSC13_MAIZE (Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 8.7e-28
Identity = 61/148 (41.22%), Postives = 94/148 (63.51%), Query Frame = 0 

Query: 12  VLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECKNRNTMELLYSQ 71
           V+ +  AA  P    +V++G+VYCDTC AGF T+ T YI GAKV++ECK+  T +L  + 
Sbjct: 20  VVLSCAAADDPNLPDYVIQGRVYCDTCRAGFVTNVTEYIAGAKVRLECKHFGTGKLERAI 79

Query: 72  EATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVILTRFNGIASNDR 131
           +  TD+TG+Y++ + + HE+ +C  +L++SP K+C  V   RDRA V+LTR  GI+ + R
Sbjct: 80  DGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNVGISDSLR 139

Query: 132 YVNAMGFARDEALSGCNQVLSQYQDIED 160
             N +G+ +D  L  C  +L Q    +D
Sbjct: 140 PANPLGYFKDVPLPVCAALLKQLDSDDD 167

[Close]
BLAST of Carg20552 vs. Swiss-Prot
Match: sp|Q8H6L7|PHLB_PHLPR (Pollen allergen Phl p 11 OS=Phleum pratense OX=15957 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.4e-25
Identity = 59/134 (44.03%), Postives = 81/134 (60.45%), Query Frame = 0 

Query: 27  FVVRGKVYCDTCLAGFETSATTYIPGAKVKIECKNRNTMELLYSQEATTDSTGSYSLLVN 86
           FVV G+VYCD C AGFET+ +  + GA V ++C+  N  E     EATTD  G Y + ++
Sbjct: 6   FVVTGRVYCDPCRAGFETNVSHNVQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEID 65

Query: 87  EDHEDQVCDALLISSPEKECSAVSEGRDRARVILTRFNGIASND-RYVNAMGFARDEALS 146
           +DH++++C+ +L  SP+  CS + E RDRARV LT  NGI     RY N + F R E L 
Sbjct: 66  QDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPLK 125

Query: 147 GCNQVLSQYQDIED 160
            C  +L  Y D+ D
Sbjct: 126 ECGGILQAY-DLRD 138

[Close]
BLAST of Carg20552 vs. Swiss-Prot
Match: sp|Q8LGR0|CHE1_CHEAL (Pollen allergen Che a 1 OS=Chenopodium album OX=3559 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-25
Identity = 67/155 (43.23%), Postives = 87/155 (56.13%), Query Frame = 0 

Query: 2   ARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECKN 61
           A F+++ ALCVL +L          F V+G VYCDTC   F T  +T + GA VK+EC+N
Sbjct: 6   AVFLLVGALCVL-SLAGVANAAENHFKVQGMVYCDTCRIQFMTRISTIMEGATVKLECRN 65

Query: 62  RNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSE---GRDRARV 121
                  +  EA TD  G YS+ VN D ED +C+  L+ SP  ECS VS     +  A+V
Sbjct: 66  ITAGTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQSAKV 125

Query: 122 ILTRFNGIASNDRYVNAMGFARDEALSGCNQVLSQ 154
            LT  NG AS+ R  NA+GF R E L  C +VL +
Sbjct: 126 SLTSNNGEASDIRSANALGFMRKEPLKECPEVLKE 159

[Close]
BLAST of Carg20552 vs. Swiss-Prot
Match: sp|Q7M1X5|LOLB_LOLPR (Major pollen allergen Lol p 11 OS=Lolium perenne OX=4522 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.9e-25
Identity = 56/129 (43.41%), Postives = 78/129 (60.47%), Query Frame = 0 

Query: 27  FVVRGKVYCDTCLAGFETSATTYIPGAKVKIECKNRNTMELLYSQEATTDSTGSYSLLVN 86
           FVV G+VYCD C AGFET+ +  + GA V ++C+  +  E     EATTD  G Y + ++
Sbjct: 6   FVVTGRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKIEID 65

Query: 87  EDHEDQVCDALLISSPEKECSAVSEGRDRARVILTRFNGIASND-RYVNAMGFARDEALS 146
           +DH++++C+ +L  SP+K CS + E RDRARV LT   GI     RY N + F R E L 
Sbjct: 66  QDHQEEICEVVLAKSPDKSCSEIEEFRDRARVPLTSNXGIKQQGIRYANPIAFFRKEPLK 125

Query: 147 GCNQVLSQY 155
            C  +L  Y
Sbjct: 126 ECGGILQAY 134

[Close]
BLAST of Carg20552 vs. TrEMBL
Match: tr|A0A0A0LQA5|A0A0A0LQA5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G309370 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 7.5e-69
Identity = 129/159 (81.13%), Postives = 150/159 (94.34%), Query Frame = 0 

Query: 1   MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60
           MAR +ILFAL +LPAL  A+RPVRTPFVVRGKV+CDTCLAGFETSATTYIPGAKV+IECK
Sbjct: 1   MARVIILFALIMLPALALASRPVRTPFVVRGKVFCDTCLAGFETSATTYIPGAKVRIECK 60

Query: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL 120
           +RN+MEL Y+ EATTDSTGSY+LLVNEDH D++CDA+L+SSP+++CS+VSEGRDRARVIL
Sbjct: 61  DRNSMELQYTHEATTDSTGSYTLLVNEDHGDELCDAVLVSSPQEKCSSVSEGRDRARVIL 120

Query: 121 TRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED 160
           TR+NGIASN+RYVNAMGFA DE +SGCNQV+SQYQDIED
Sbjct: 121 TRYNGIASNERYVNAMGFAMDEPMSGCNQVMSQYQDIED 159

[Close]
BLAST of Carg20552 vs. TrEMBL
Match: tr|A0A1S3BC11|A0A1S3BC11_CUCME (protein DOWNSTREAM OF FLC OS=Cucumis melo OX=3656 GN=LOC103488413 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.7e-68
Identity = 128/159 (80.50%), Postives = 150/159 (94.34%), Query Frame = 0 

Query: 1   MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60
           MAR VILFAL +LPAL  A+RPVRTPFVVRGKV+CDTCLAGFETSATTYIPGAKV+IECK
Sbjct: 1   MARLVILFALIMLPALAVASRPVRTPFVVRGKVFCDTCLAGFETSATTYIPGAKVRIECK 60

Query: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL 120
           +RN+ME+ Y+ EATTDSTGSY+LLV+EDH D++CDA+L+SSP+++CS+V+EGRDRARVIL
Sbjct: 61  DRNSMEVRYTHEATTDSTGSYTLLVSEDHGDELCDAVLVSSPQEKCSSVAEGRDRARVIL 120

Query: 121 TRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED 160
           TR+NGIASNDRYVNAMGFA DE +SGCNQV+SQYQDIED
Sbjct: 121 TRYNGIASNDRYVNAMGFAIDEPMSGCNQVMSQYQDIED 159

[Close]
BLAST of Carg20552 vs. TrEMBL
Match: tr|A0A2I4FB86|A0A2I4FB86_9ROSI (pollen-specific protein C13-like OS=Juglans regia OX=51240 GN=LOC108997210 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 6.0e-58
Identity = 114/161 (70.81%), Postives = 140/161 (86.96%), Query Frame = 0 

Query: 1   MARFVILFALC-VLPAL-VAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIE 60
           MA  V LFALC +LPAL V+A RP R PF+VRGKVYCDTC AGFETSATTYIPGAKV++E
Sbjct: 1   MATKVFLFALCAILPALIVSAGRPARNPFIVRGKVYCDTCRAGFETSATTYIPGAKVRVE 60

Query: 61  CKNRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARV 120
           CK+RNTM+LLYS+E TTDSTG+YS+LV EDHEDQ+CDA+L+SS + +C+  S GR+RARV
Sbjct: 61  CKDRNTMQLLYSKEGTTDSTGTYSILVAEDHEDQLCDAMLVSSSQHDCATASPGRERARV 120

Query: 121 ILTRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED 160
           ILT +NGIASN+R+VNAMGF ++EALSGC +VL QYQ+ ++
Sbjct: 121 ILTGYNGIASNNRFVNAMGFMKEEALSGCAEVLKQYQEDDE 161

[Close]
BLAST of Carg20552 vs. TrEMBL
Match: tr|A0A2P4KIH0|A0A2P4KIH0_QUESU (Protein downstream of flc OS=Quercus suber OX=58331 GN=CFP56_06777 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 5.0e-57
Identity = 106/159 (66.67%), Postives = 136/159 (85.53%), Query Frame = 0 

Query: 1   MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60
           MA+  +LF LCVLPAL   +RP+  PF V+G+VYCDTC AGFETSATTYIPGAKV++ECK
Sbjct: 1   MAKMFMLFVLCVLPALAIGSRPMSNPFNVQGRVYCDTCRAGFETSATTYIPGAKVRVECK 60

Query: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL 120
           N++TMEL+YS+EATTDSTG+Y++ V+EDH+DQ+CDA+L+SSP+ +C+ VS GRDRARVIL
Sbjct: 61  NKSTMELVYSKEATTDSTGTYNIEVDEDHQDQLCDAMLVSSPQSDCATVSPGRDRARVIL 120

Query: 121 TRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIED 160
           T  NGIAS  R+ NAMGF +++ALSGC QVL QYQ+ ++
Sbjct: 121 TGLNGIASQKRFANAMGFMKEKALSGCAQVLKQYQEYDE 159

[Close]
BLAST of Carg20552 vs. TrEMBL
Match: tr|A0A2P5CKQ2|A0A2P5CKQ2_PARAD (Allergen Ole e 1, conserved site OS=Parasponia andersonii OX=3476 GN=PanWU01x14_145250 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.1e-56
Identity = 107/158 (67.72%), Postives = 134/158 (84.81%), Query Frame = 0 

Query: 1   MARFVILFALCVLPALVAATRPVRTPFVVRGKVYCDTCLAGFETSATTYIPGAKVKIECK 60
           MA+ ++L ALC+ PAL  A+RPV+ P  V GKVYCDTC AGFETSATTYI GAKV+IEC+
Sbjct: 1   MAKALLLMALCLFPALATASRPVKDPLKVEGKVYCDTCRAGFETSATTYIAGAKVRIECR 60

Query: 61  NRNTMELLYSQEATTDSTGSYSLLVNEDHEDQVCDALLISSPEKECSAVSEGRDRARVIL 120
            R TM+L+YS+EATTDS+G+Y +L++EDH D+VCDALL+SSP+ +C+A S GRDRARVIL
Sbjct: 61  ERQTMDLVYSKEATTDSSGTYKMLISEDHADEVCDALLVSSPQADCAAASPGRDRARVIL 120

Query: 121 TRFNGIASNDRYVNAMGFARDEALSGCNQVLSQYQDIE 159
           T +NGIAS++RYVNAMGF R+EAL+GC  VL QYQ+ E
Sbjct: 121 TSYNGIASSNRYVNAMGFTRNEALAGCADVLKQYQETE 158

The following BLAST results are available for this feature:
BLAST of Carg20552 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023536678.16.9e-8299.37protein DOWNSTREAM OF FLC-like [Cucurbita pepo subsp. pepo][more]
XP_023001897.12.0e-8197.48pollen-specific protein C13-like [Cucurbita maxima][more]
XP_022951574.12.6e-8198.74pollen-specific protein C13-like [Cucurbita moschata][more]
XP_022132052.14.0e-7487.42pollen-specific protein C13-like [Momordica charantia][more]
XP_022962421.12.1e-7084.28protein DOWNSTREAM OF FLC-like [Cucurbita moschata][more]
BLAST of Carg20552 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G08685.13.5e-5664.78Pollen Ole e 1 allergen and extensin family protein[more]
AT1G78040.19.0e-3644.79Pollen Ole e 1 allergen and extensin family protein[more]
AT5G10130.12.5e-3047.68Pollen Ole e 1 allergen and extensin family protein[more]
AT1G29140.16.5e-2639.88Pollen Ole e 1 allergen and extensin family protein[more]
AT5G45880.11.4e-2337.04Pollen Ole e 1 allergen and extensin family protein[more]
BLAST of Carg20552 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LX15|DFC_ARATH4.6e-2947.68Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=DFC PE=2 SV=1[more]
sp|P33050|PSC13_MAIZE8.7e-2841.22Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1[more]
sp|Q8H6L7|PHLB_PHLPR1.4e-2544.03Pollen allergen Phl p 11 OS=Phleum pratense OX=15957 PE=1 SV=1[more]
sp|Q8LGR0|CHE1_CHEAL1.8e-2543.23Pollen allergen Che a 1 OS=Chenopodium album OX=3559 PE=1 SV=1[more]
sp|Q7M1X5|LOLB_LOLPR6.9e-2543.41Major pollen allergen Lol p 11 OS=Lolium perenne OX=4522 PE=1 SV=1[more]
BLAST of Carg20552 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LQA5|A0A0A0LQA5_CUCSA7.5e-6981.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G309370 PE=4 SV=1[more]
tr|A0A1S3BC11|A0A1S3BC11_CUCME3.7e-6880.50protein DOWNSTREAM OF FLC OS=Cucumis melo OX=3656 GN=LOC103488413 PE=4 SV=1[more]
tr|A0A2I4FB86|A0A2I4FB86_9ROSI6.0e-5870.81pollen-specific protein C13-like OS=Juglans regia OX=51240 GN=LOC108997210 PE=4 ... [more]
tr|A0A2P4KIH0|A0A2P4KIH0_QUESU5.0e-5766.67Protein downstream of flc OS=Quercus suber OX=58331 GN=CFP56_06777 PE=4 SV=1[more]
tr|A0A2P5CKQ2|A0A2P5CKQ2_PARAD1.1e-5667.72Allergen Ole e 1, conserved site OS=Parasponia andersonii OX=3476 GN=PanWU01x14_... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20552-RACarg20552-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF01190Pollen_Ole_e_Icoord: 29..112
e-value: 1.8E-18
score: 66.6
NoneNo IPR availablePANTHERPTHR31614:SF5ALLERGEN-LIKE PROTEIN BRSN20-RELATEDcoord: 1..159
NoneNo IPR availablePANTHERPTHR31614FAMILY NOT NAMEDcoord: 1..159