CmaCh05G003920 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh05G003920
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Plant protein of unknown function (DUF247)
Location	Cma_Chr05 : 1721330 .. 1722386 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAGATTCACGAGGTTCACCAAATTTGTGGAAATATTGTGATGTCCCTAAAAAATAAGTTGGAACAACTTCCTCCGGTTAAGGAAGAACCTAGCATCTATCAAGTTCCCTAACTGTTACGCGAGATGAATAATAAAACCTATATCCCTCAAGTCATTTCCATCGGTCCATTTCACCATCGTAGTCCAGATTTGATAACCACATAGCCATATAAGGTTCAAGGTCTTAATAACTTTGTAAGTCGTCTGAATAATAAGATGAGATGTATAAATAATCCGATGAACGCACTAGAGTTTCTTGTGACAATTGCTCGACATTGGGTGGAAGAAGGTCGAAATTGCTATTTGGAACCCATAAGCATGAATGACGAGAATTTTGTTGAAATGATGATTGTGGATAGTTGTTTCATAGTGGAGTTTTTGATACTATATTATGGCCGATACCAACCGGATCCCTTCCCTACCATTTCAAGCAATGTAGATTATTCATTCTACAAAAGAATCCCTGATATAGATCTTGATTTGATTAAGTTAGAAAATCAAATCCCTTTCTCGGTTCTTGAACGTATGTTTAAACTTATACTAGAAGATGATACCCCCATCTCCGTTATAGAGCTTGCATACGTGTTTTTGCAACATGGATTGATACATCCATATGAACTTTCTACTCCCTTGTTCGAGAACACCAAAACACTTCGTTGATTTCTTAAGCTTGTACTTTGTTGTTTCCAAGGGGTCTTCTGTGATCAACATTTGAGCATTTTTTTTCTCAGCAAATGAGAGCAAGTGTATCCAATATATCACATTCATGGATTATTTGATAAGCACCGAGGAAGACATAAGTTTACTTGAGAATGTCGAAATCATAATCAACGATATTGGAGGCAGTGCTAAAGAAATTTCAAAACTGTTTAACGATCTCTGTAAATTTGCCACAGTCCTACATAGTACCCACTTCAACAAAATTAGTATTGGTTTAAATGAGCACTGCAATAGACGTTGGAACAGAGCGAAAGCTAAAATGAGCACTGCAATAGACGTTGGAATGGAGTGA

mRNA sequence

ATGGCAGAGATTCACGAGGTTCACCAAATTTGTGGAAATATTGTGATGTCCCTAAAAAATAAGTTGGAACAACTTCCTCCGGTTAAGGAAGAACCTAGCATCTATCAAGTTCAAGGTCTTAATAACTTTGTAAGTCGTCTGAATAATAAGATGAGATGTATAAATAATCCGATGAACGCACTAGAGTTTCTTGTGACAATTGCTCGACATTGGGTGGAAGAAGGTCGAAATTGCTATTTGGAACCCATAAGCATGAATGACGAGAATTTTGTTGAAATGATGATTGTGGATAGTTGTTTCATAGTGGAGTTTTTGATACTATATTATGGCCGATACCAACCGGATCCCTTCCCTACCATTTCAAGCAATGTAGATTATTCATTCTACAAAAGAATCCCTGATATAGATCTTGATTTGATTAAGTTAGAAAATCAAATCCCTTTCTCGGTTCTTGAACGTATGTTTAAACTTATACTAGAAGATGATACCCCCATCTCCGTTATAGAGCTTGCATACGTGTTTTTGCAACATGGATTGATACATCCATATGAACTTTCTACTCCCTTGTTCGAGAACACCAAAACACTTCCAAATGAGAGCAAGTGTATCCAATATATCACATTCATGGATTATTTGATAAGCACCGAGGAAGACATAAGTTTACTTGAGAATGTCGAAATCATAATCAACGATATTGGAGGCAGTGCTAAAGAAATTTCAAAACTGTTTAACGATCTCTGTAAATTTGCCACAGTCCTACATAGTACCCACTTCAACAAAATTAGTATTGGTTTAAATGAGCACTGCAATAGACGTTGGAACAGAGCGAAAGCTAAAATGAGCACTGCAATAGACGTTGGAATGGAGTGA

Coding sequence (CDS)

ATGGCAGAGATTCACGAGGTTCACCAAATTTGTGGAAATATTGTGATGTCCCTAAAAAATAAGTTGGAACAACTTCCTCCGGTTAAGGAAGAACCTAGCATCTATCAAGTTCAAGGTCTTAATAACTTTGTAAGTCGTCTGAATAATAAGATGAGATGTATAAATAATCCGATGAACGCACTAGAGTTTCTTGTGACAATTGCTCGACATTGGGTGGAAGAAGGTCGAAATTGCTATTTGGAACCCATAAGCATGAATGACGAGAATTTTGTTGAAATGATGATTGTGGATAGTTGTTTCATAGTGGAGTTTTTGATACTATATTATGGCCGATACCAACCGGATCCCTTCCCTACCATTTCAAGCAATGTAGATTATTCATTCTACAAAAGAATCCCTGATATAGATCTTGATTTGATTAAGTTAGAAAATCAAATCCCTTTCTCGGTTCTTGAACGTATGTTTAAACTTATACTAGAAGATGATACCCCCATCTCCGTTATAGAGCTTGCATACGTGTTTTTGCAACATGGATTGATACATCCATATGAACTTTCTACTCCCTTGTTCGAGAACACCAAAACACTTCCAAATGAGAGCAAGTGTATCCAATATATCACATTCATGGATTATTTGATAAGCACCGAGGAAGACATAAGTTTACTTGAGAATGTCGAAATCATAATCAACGATATTGGAGGCAGTGCTAAAGAAATTTCAAAACTGTTTAACGATCTCTGTAAATTTGCCACAGTCCTACATAGTACCCACTTCAACAAAATTAGTATTGGTTTAAATGAGCACTGCAATAGACGTTGGAACAGAGCGAAAGCTAAAATGAGCACTGCAATAGACGTTGGAATGGAGTGA

Protein sequence

MAEIHEVHQICGNIVMSLKNKLEQLPPVKEEPSIYQVQGLNNFVSRLNNKMRCINNPMNALEFLVTIARHWVEEGRNCYLEPISMNDENFVEMMIVDSCFIVEFLILYYGRYQPDPFPTISSNVDYSFYKRIPDIDLDLIKLENQIPFSVLERMFKLILEDDTPISVIELAYVFLQHGLIHPYELSTPLFENTKTLPNESKCIQYITFMDYLISTEEDISLLENVEIIINDIGGSAKEISKLFNDLCKFATVLHSTHFNKISIGLNEHCNRRWNRAKAKMSTAIDVGME

Homology

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BLAST of CmaCh05G003920 vs. TrEMBL
Match: A0A0A0LLX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.8e-30
Identity = 100/260 (38.46%), Postives = 139/260 (53.46%), Query Frame = 1


Query: 1   MAEIHEVHQ--ICGNIVMSLKNKLEQLPP-VKEEPSIYQ--------------------- 60
           M EI  V+Q  IC  +V+S+KN L Q+PP +K + SIY+                     
Sbjct: 20  MIEISGVNQQLICDRVVISIKNLLYQVPPALKNQCSIYRVPKQQREMNPKAYVPQHISIG 79

Query: 61  -----------------VQGLNNFVSRLNNKMRCINNPMN--ALEFLVTIARHWVEEGRN 120
                             Q + NF+ R+  K+  +   +   +LE LV  A+ WV+E RN
Sbjct: 80  PFYYHADENLRANEQYKFQSVINFLRRVY-KIESLEQLLQTRSLEDLVKKAQSWVKEARN 139

Query: 121 CYLEPISMNDENFVEMMIVDSCFIVEFLILYYGRYQ-PDP--FPTISSNVDYSFYK-RIP 180
           CY E I MNDE+F++MM++D CFIVEF IL Y  Y+ PD   FP I +NV  SFYK RIP
Sbjct: 140 CYAESIDMNDEDFIKMMLMDGCFIVEFFILDYEEYKMPDESFFPKIENNVSMSFYKERIP 199

Query: 181 DIDLDLIKLENQIPFSVLERMFKLI-LEDDTPISVIELAYVFLQHGLIHPYELSTPLFEN 213
           DID DLIKLENQ+PF +L+ ++ LI  +DD P    EL   +L+ G +  YE        
Sbjct: 200 DIDDDLIKLENQLPFFILQHLYDLIPKQDDNPKCFKELTCKYLKMGWLENYE-------- 259

[Close]

BLAST of CmaCh05G003920 vs. TrEMBL
Match: A0A0A0K4A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068570 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.7e-29
Identity = 81/198 (40.91%), Postives = 111/198 (56.06%), Query Frame = 1


Query: 12  GNIVMSLKNKLEQLPPVKEEPSIYQV---------------------------------- 71
           G+ V+S+K+KLEQLP V +E  IY+V                                  
Sbjct: 25  GDTVISIKSKLEQLPVVNKECKIYRVPKLLCQMKKTTYVPQVISIGPFHHGSKDLNATEP 84

Query: 72  ---QGLNNFVSRLNNKMRCINNPMNALEFLVTIARHWVEEGRNCYLEPISMNDENFVEMM 131
              QGL NF+ RL+N          +LE LV IAR W+EE R+CY++PI M+D  FV+MM
Sbjct: 85  YKLQGLRNFLRRLDNHKE------KSLEELVKIARSWIEEARSCYVDPIDMDDYEFVKMM 144

Query: 132 IVDSCFIVEFLILYYGRY---QPDPFPTISSNVDYSFYKR-IPDIDLDLIKLENQIPFSV 169
           +VD CFIVEF IL Y +Y       FP I  N    FY+  IPD+  DL+KLENQ+PF +
Sbjct: 145 LVDGCFIVEFFILVYSQYTTSNDHKFPQIDPNAGLLFYQGIIPDMYFDLLKLENQLPFFI 204

[Close]

BLAST of CmaCh05G003920 vs. TrEMBL
Match: A0A0A0LQ57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 70/184 (38.04%), Postives = 105/184 (57.07%), Query Frame = 1


Query: 35  YQVQGLNNFVSRLNNKMRCINNPMNALE---------FLVTIARHWVEEGRNCYLEPISM 94
           Y++QG  NF+ R++     IN+ +  LE          LV  +  WV+E  NCY EPI M
Sbjct: 81  YKLQGFFNFLGRIS----IINSHIQLLEENQVNISSKVLVEKSHDWVKEAWNCYAEPIKM 140

Query: 95  NDENFVEMMIVDSCFIVEFLILYYGRYQPDPFPTISSNVDYSFYKRIPDIDLDLIKLENQ 154
            DE F+ MM+VD+CFIVEF +LYYG +  D     ++ +   +Y    +I LDLIKLENQ
Sbjct: 141 KDEEFIIMMLVDACFIVEFFLLYYGSFHEDG-KLFNAELSLFYYGVFYEILLDLIKLENQ 200

Query: 155 IPFSVLERMFKLILED------------DTPISVIELAYVFL-QHGLIHPYELSTPLFEN 197
           +PF +L+ +F L+ +D            D+PIS+I+L Y+ L + G +  Y+++    +N
Sbjct: 201 VPFFLLQNLFDLMPKDKVDISSIIGGYKDSPISLIDLTYMVLKEFGFVREYKINNLYHKN 259

[Close]

BLAST of CmaCh05G003920 vs. TrEMBL
Match: A0A0A0LQ64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381630 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.2e-20
Identity = 72/193 (37.31%), Postives = 97/193 (50.26%), Query Frame = 1


Query: 11  CGNIVMSLKNKLEQLPPVKEEPSIYQV--------------------------------- 70
           C +IV+S+K+KL+QL  V  E +IY+V                                 
Sbjct: 9   CRDIVISIKSKLKQLHVVNTECNIYRVPKLLCQMNMTAYVPQVISIGPLHHGSKDLNATE 68

Query: 71  ----QGLNNFVSRLNNKMRCINNPMNALEFLVTIARHWVEEGRNCYLEPISMNDENFVEM 130
               QGL NF+ R ++           LE LV I + +V   R+CY +PI M+D  FV+M
Sbjct: 69  CYKLQGLRNFLRRFDDSYG-----EKLLENLVEITQFYVGRARSCYADPIDMDDHEFVKM 128

Query: 131 MIVDSCFIVEFLILYYGRYQPD--PFPTISSNVDYSFYKR--IPDIDLDLIKLENQIPFS 163
           M+VD CFIVE  IL +     D   F  I  NVD  FY +  IPD+  DLIKLENQ+PF 
Sbjct: 129 MLVDGCFIVELFILVHNITTSDDHKFSKIDQNVDLLFYYQGIIPDVYFDLIKLENQLPFF 188

[Close]

BLAST of CmaCh05G003920 vs. TrEMBL
Match: A0A0A0LM96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.1e-19
Identity = 51/92 (55.43%), Postives = 69/92 (75.00%), Query Frame = 1


Query: 190 FENTKTLPNESKCIQYITFMDYLISTEEDISLLENVEIIINDIGGSAKEISKLFNDLCKF 249
           FE+     N +  I Y+TFMDYLISTE+D++LL   +IIINDIGGS +E+S+LFN+LCKF
Sbjct: 317 FEHFPVEVNNTYVIPYVTFMDYLISTEKDVNLLVKEKIIINDIGGSDREVSQLFNNLCKF 376

Query: 250 -ATVLHSTHFNKISIGLNEHCNRRWNRAKAKM 281
            ++  +  +FN IS GL EHC+R WN+AKA +
Sbjct: 377 VSSSPNDNYFNNISEGLREHCDRWWNKAKASL 408

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BLAST of CmaCh05G003920 vs. TAIR10
Match: AT4G31980.1 (AT4G31980.1 unknown protein)

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-13
Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 1


Query: 15  VMSLKNKLEQLPPVKEEPSIYQVQGLNNFVSRL----NNKMRC----INNPMNALEFLVT 74
           +  + NKL +L P    P +     L+     L    + K R     I    ++LE LV 
Sbjct: 295 IYKVPNKLRRLNPDAYTPRLVSFGPLHRGKEELQAMEDQKYRYLLSFIPRTNSSLEDLVR 354

Query: 75  IARHWVEEGRNCYLEPISMNDENFVEMMIVDSCFIVEFLILYYGRYQPDPFPTISSNVDY 134
           +AR W +  R+CY E + ++ + FVEM++VD  F+VE L+  +       +P +    D 
Sbjct: 355 LARTWEQNARSCYAEDVKLHSDEFVEMLVVDGSFLVELLLRSH-------YPRLRGENDR 414

Query: 135 SF--YKRIPDIDLDLIKLENQIPFSVLERMFKLIL---EDDTPISVIELA 172
            F     I D+  D+I +ENQ+PF V++ +F L+L   +  TP S+I+LA
Sbjct: 415 IFGNSMMITDVCRDMILIENQLPFFVVKEIFLLLLNYYQQGTP-SIIQLA 456

[Close]

BLAST of CmaCh05G003920 vs. TAIR10
Match: AT5G11290.1 (AT5G11290.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 72.8 bits (177), Expect = 3.9e-13
Identity = 40/102 (39.22%), Postives = 63/102 (61.76%), Query Frame = 1


Query: 60  ALEFLVTIARHWVEEGRNCYLEPISMNDENFVEMMIVDSCFIVEFLILYYGRYQPDPFPT 119
           +LE LV +AR W E  R CY E + ++ + +V+M+IVD+ F+VE L+    R Q D +  
Sbjct: 19  SLEDLVRVARTWEERARFCYTEDVRLSSDEYVKMLIVDASFLVELLL----RSQFDVYRG 78

Query: 120 ISSNVDYSFYKRIPDIDLDLIKLENQIPFSVLERMFKLILED 162
           +   + Y   K I D++ D++ LENQ+P+ V+E MF L+  D
Sbjct: 79  MLDRI-YGKQKMIVDVNHDVMLLENQLPYFVVEGMFGLLHVD 115

[Close]

BLAST of CmaCh05G003920 vs. TAIR10
Match: AT2G36430.1 (AT2G36430.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-09
Identity = 45/140 (32.14%), Postives = 72/140 (51.43%), Query Frame = 1


Query: 61  LEFLVTIARHWVEEGRNCYLEPISMNDENFVEMMIVDSCFIVEFL--ILYYGRYQP-DPF 120
           LE  +   ++  E  R CY E I M+ E F EMM++D CF++E    +     ++P DP 
Sbjct: 102 LEDYMKSVKNVEEVARECYSETIHMDSEEFNEMMVLDGCFLLELFRKVNNLVPFEPNDPL 161

Query: 121 PTISSNVDYSFYKRIPDIDLDLIKLENQIPFSVLERMFKLIL---EDDTPISVIELAYVF 180
             ++  + + FY+       D + LENQIPF VLE +F L     E++T  S+  LA+ F
Sbjct: 162 VAMAWVLPF-FYR-------DFLCLENQIPFFVLETLFNLTRGDNENETNASLQSLAFAF 221

Query: 181 LQHGLIHPYELSTPLFENTK 195
             + ++H  E     F+  +
Sbjct: 222 F-NNMMHRTEEDLARFKELR 232

[Close]

BLAST of CmaCh05G003920 vs. TAIR10
Match: AT3G50170.1 (AT3G50170.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-09
Identity = 46/177 (25.99%), Postives = 77/177 (43.50%), Query Frame = 1


Query: 38  QGLNNFVSRLNNKMRCINNPMNALEFLVTIARHWVEEGRNCYLEPISMNDENFVEMMIVD 97
           + LN  + RL  ++    N M  LE          E+ R CY  PIS++   F EM+++D
Sbjct: 156 RALNKVLKRLKQRIEMYTNAMRELE----------EKARACYEGPISLSRNEFTEMLVLD 215

Query: 98  SCFIVE--------FLILYYGRYQPDPFPTISSNVDYSFYKRIPDIDLDLIKLENQIPFS 157
            CF++E        F  + Y R  P           ++    +  I  D+I LENQ+P  
Sbjct: 216 GCFVLELFRGTVEGFTEIGYARNDP----------VFAMRGLMHSIQRDMIMLENQLPLF 275

Query: 158 VLERMFKLILEDDTPISVIELAYVFLQHGLIHPYELSTPLFENTKTLPNESKCIQYI 207
           VL+R+ +L L       ++        H  +  ++   P  E   T P++SK + ++
Sbjct: 276 VLDRLLELQLGTQNQTGIV-------AHVAVKFFDPLMPTGE-ALTKPDQSKLMNWL 304

[Close]

BLAST of CmaCh05G003920 vs. TAIR10
Match: AT5G22540.1 (AT5G22540.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 55.5 bits (132), Expect = 6.5e-08
Identity = 34/113 (30.09%), Postives = 60/113 (53.10%), Query Frame = 1


Query: 76  RNCYLEPISMNDENFVEMMIVDSCFIVEFLILYYGRYQPDPFPTISSNVDYSFYKR---I 135
           R  Y E + ++ EN V+MM++D CFI+    +  G+ +        +N+D   ++    +
Sbjct: 105 RGSYSEDLGLDSENLVQMMVLDGCFILTLFFVVSGKVE-------YTNLDDPIFRMPWIL 164

Query: 136 PDIDLDLIKLENQIPFSVLERMF---KLILEDDTPISVIELAYVFLQHGLIHP 183
           P I  DL+ LENQ+P+ +L+ +F   KL+    T   + E+A+ F  + L  P
Sbjct: 165 PSIRADLLLLENQVPYVLLQTLFETSKLV----TCSGLNEIAFEFFNYSLQKP 206

[Close]

BLAST of CmaCh05G003920 vs. NCBI nr
Match: gi|659088834|ref|XP_008445186.1| (PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo])

HSP 1 Score: 149.1 bits (375), Expect = 1.2e-32
Identity = 94/235 (40.00%), Postives = 128/235 (54.47%), Query Frame = 1


Query: 1   MAEIHEVHQICGNIVMSLKNKLEQLPPVKEEPSIYQV----------------------- 60
           ++E+   H  CG+IV+S+K+KLEQLP V  E SIY+V                       
Sbjct: 17  ISEVKRKH--CGDIVISIKSKLEQLPAVNTECSIYRVPKLLCQMNRIAYVPQVISIGPFH 76

Query: 61  --------------QGLNNFVSRLNNKMRCINNPMNALEFLVTIARHWVEEGRNCYLEPI 120
                         QGL NF+ RL++     +    +LE LV IA+ WVEE R CY +PI
Sbjct: 77  HGSKDLNATERYKLQGLRNFLRRLDD-----HKAEKSLEELVKIAQSWVEEARRCYADPI 136

Query: 121 SMNDENFVEMMIVDSCFIVEFLILYYGRYQPD---PFPTISSNVDYSFYKR-IPDIDLDL 180
            M+D  FV+MM+VD CFIVEF IL + +Y       FP I  NVD  FY+  IPD+  DL
Sbjct: 137 DMDDHEFVKMMLVDGCFIVEFFILVHNQYTTSADHKFPQIDPNVDLLFYQGIIPDVYFDL 196

Query: 181 IKLENQIPFSVLERMFKLILEDDTP-----------ISVIELAYVFLQHGLIHPY 184
           IKLENQ+PF +L+R+F+LI +++ P           IS +EL + FL+ G +  Y
Sbjct: 197 IKLENQLPFFLLQRLFELIPKENNPKSLIPDNEFSTISFLELTFEFLRLGWVENY 244

[Close]

BLAST of CmaCh05G003920 vs. NCBI nr
Match: gi|778674379|ref|XP_011650197.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 9.7e-30
Identity = 100/260 (38.46%), Postives = 139/260 (53.46%), Query Frame = 1


Query: 1   MAEIHEVHQ--ICGNIVMSLKNKLEQLPP-VKEEPSIYQ--------------------- 60
           M EI  V+Q  IC  +V+S+KN L Q+PP +K + SIY+                     
Sbjct: 20  MIEISGVNQQLICDRVVISIKNLLYQVPPALKNQCSIYRVPKQQREMNPKAYVPQHISIG 79

Query: 61  -----------------VQGLNNFVSRLNNKMRCINNPMN--ALEFLVTIARHWVEEGRN 120
                             Q + NF+ R+  K+  +   +   +LE LV  A+ WV+E RN
Sbjct: 80  PFYYHADENLRANEQYKFQSVINFLRRVY-KIESLEQLLQTRSLEDLVKKAQSWVKEARN 139

Query: 121 CYLEPISMNDENFVEMMIVDSCFIVEFLILYYGRYQ-PDP--FPTISSNVDYSFYK-RIP 180
           CY E I MNDE+F++MM++D CFIVEF IL Y  Y+ PD   FP I +NV  SFYK RIP
Sbjct: 140 CYAESIDMNDEDFIKMMLMDGCFIVEFFILDYEEYKMPDESFFPKIENNVSMSFYKERIP 199

Query: 181 DIDLDLIKLENQIPFSVLERMFKLI-LEDDTPISVIELAYVFLQHGLIHPYELSTPLFEN 213
           DID DLIKLENQ+PF +L+ ++ LI  +DD P    EL   +L+ G +  YE        
Sbjct: 200 DIDDDLIKLENQLPFFILQHLYDLIPKQDDNPKCFKELTCKYLKMGWLENYE-------- 259

[Close]

BLAST of CmaCh05G003920 vs. NCBI nr
Match: gi|659088838|ref|XP_008445188.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 139.4 bits (350), Expect = 9.7e-30
Identity = 95/235 (40.43%), Postives = 124/235 (52.77%), Query Frame = 1


Query: 1   MAEIHEVHQ---ICGNIVMSLKNKLEQLPPVKEEP-SIYQV------------------- 60
           M EI  V Q   +C N+V+S++  L+Q+PP  E   SIY+V                   
Sbjct: 25  MVEISVVDQQQLVCDNVVISIEKMLDQVPPTHENQCSIYRVPKQLREMNPKAYAPQLISI 84

Query: 61  -------------------QGLNNFVSRLNNKMRCINNPMN--ALEFLVTIARHWVEEGR 120
                              QG  N++ R+  KM  +   +   ++E LV  A+ WVEE R
Sbjct: 85  GPFHYHTHKNLIANEQYKLQGFINYLRRVY-KMESLEQLVRTKSVEDLVKRAQSWVEEAR 144

Query: 121 NCYLEPISMNDENFVEMMIVDSCFIVEFLILYYGRYQPDP---FPTISSNVDYSFYK-RI 180
           NCY E I+MNDE+F++MM+VD CFIVEF IL +  Y       FP I +NV  SFYK RI
Sbjct: 145 NCYAETINMNDEDFIKMMLVDGCFIVEFFILDFEEYNESHESLFPQIENNVSMSFYKERI 204

Query: 181 PDIDLDLIKLENQIPFSVLERMFKLI-LEDDTPISVIELAYVFLQHGLIHPYELS 187
           PDID DLIKLENQ+PF VL+ +F LI    D P    +L Y +L  G +  YE S
Sbjct: 205 PDIDEDLIKLENQLPFFVLQHLFDLIPKHKDAPNCFKQLTYEYLTMGWLENYEPS 258

[Close]

BLAST of CmaCh05G003920 vs. NCBI nr
Match: gi|700188571|gb|KGN43804.1| (hypothetical protein Csa_7G068570 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 8.2e-29
Identity = 81/198 (40.91%), Postives = 111/198 (56.06%), Query Frame = 1


Query: 12  GNIVMSLKNKLEQLPPVKEEPSIYQV---------------------------------- 71
           G+ V+S+K+KLEQLP V +E  IY+V                                  
Sbjct: 25  GDTVISIKSKLEQLPVVNKECKIYRVPKLLCQMKKTTYVPQVISIGPFHHGSKDLNATEP 84

Query: 72  ---QGLNNFVSRLNNKMRCINNPMNALEFLVTIARHWVEEGRNCYLEPISMNDENFVEMM 131
              QGL NF+ RL+N          +LE LV IAR W+EE R+CY++PI M+D  FV+MM
Sbjct: 85  YKLQGLRNFLRRLDNHKE------KSLEELVKIARSWIEEARSCYVDPIDMDDYEFVKMM 144

Query: 132 IVDSCFIVEFLILYYGRY---QPDPFPTISSNVDYSFYKR-IPDIDLDLIKLENQIPFSV 169
           +VD CFIVEF IL Y +Y       FP I  N    FY+  IPD+  DL+KLENQ+PF +
Sbjct: 145 LVDGCFIVEFFILVYSQYTTSNDHKFPQIDPNAGLLFYQGIIPDMYFDLLKLENQLPFFI 204

[Close]

BLAST of CmaCh05G003920 vs. NCBI nr
Match: gi|700207813|gb|KGN62932.1| (hypothetical protein Csa_2G380610 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 2.3e-23
Identity = 70/184 (38.04%), Postives = 105/184 (57.07%), Query Frame = 1


Query: 35  YQVQGLNNFVSRLNNKMRCINNPMNALE---------FLVTIARHWVEEGRNCYLEPISM 94
           Y++QG  NF+ R++     IN+ +  LE          LV  +  WV+E  NCY EPI M
Sbjct: 81  YKLQGFFNFLGRIS----IINSHIQLLEENQVNISSKVLVEKSHDWVKEAWNCYAEPIKM 140

Query: 95  NDENFVEMMIVDSCFIVEFLILYYGRYQPDPFPTISSNVDYSFYKRIPDIDLDLIKLENQ 154
            DE F+ MM+VD+CFIVEF +LYYG +  D     ++ +   +Y    +I LDLIKLENQ
Sbjct: 141 KDEEFIIMMLVDACFIVEFFLLYYGSFHEDG-KLFNAELSLFYYGVFYEILLDLIKLENQ 200

Query: 155 IPFSVLERMFKLILED------------DTPISVIELAYVFL-QHGLIHPYELSTPLFEN 197
           +PF +L+ +F L+ +D            D+PIS+I+L Y+ L + G +  Y+++    +N
Sbjct: 201 VPFFLLQNLFDLMPKDKVDISSIIGGYKDSPISLIDLTYMVLKEFGFVREYKINNLYHKN 259

The following BLAST results are available for this feature:

BLAST of CmaCh05G003920 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh05G003920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLX1_CUCSA	6.8e-30	38.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1	[more]
A0A0A0K4A0_CUCSA	5.7e-29	40.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068570 PE=4 SV=1	[more]
A0A0A0LQ57_CUCSA	1.6e-23	38.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1	[more]
A0A0A0LQ64_CUCSA	2.2e-20	37.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381630 PE=4 SV=1	[more]
A0A0A0LM96_CUCSA	3.1e-19	55.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1	[more]

BLAST of CmaCh05G003920 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31980.1	1.0e-13	31.76	unknown protein	[more]
AT5G11290.1	3.9e-13	39.22	Plant protein of unknown function (DUF247)	[more]
AT2G36430.1	2.6e-09	32.14	Plant protein of unknown function (DUF247)	[more]
AT3G50170.1	3.4e-09	25.99	Plant protein of unknown function (DUF247)	[more]
AT5G22540.1	6.5e-08	30.09	Plant protein of unknown function (DUF247)	[more]

BLAST of CmaCh05G003920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088834\|ref\|XP_008445186.1\|	1.2e-32	40.00	PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo]	[more]
gi\|778674379\|ref\|XP_011650197.1\|	9.7e-30	38.46	PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus]	[more]
gi\|659088838\|ref\|XP_008445188.1\|	9.7e-30	40.43	PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]	[more]
gi\|700188571\|gb\|KGN43804.1\|	8.2e-29	40.91	hypothetical protein Csa_7G068570 [Cucumis sativus]	[more]
gi\|700207813\|gb\|KGN62932.1\|	2.3e-23	38.04	hypothetical protein Csa_2G380610 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004158	DUF247_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G003920.1	CmaCh05G003920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004158	Protein of unknown function DUF247, plant	PFAM	PF03140	DUF247	coord: 190..280 score: 2.5E-16coord: 49..166 score: 1.7
None	No IPR available	PANTHER	PTHR31549	FAMILY NOT NAMED	coord: 60..280 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh05G003920	MELO3C011246	Melon (DHL92) v3.5.1	cmameB725
CmaCh05G003920	ClCG08G013190	Watermelon (Charleston Gray)	cmawcgB712
CmaCh05G003920	CSPI02G23290	Wild cucumber (PI 183967)	cmacpiB801
CmaCh05G003920	CmoCh05G004000	Cucurbita moschata (Rifu)	cmacmoB786
CmaCh05G003920	CsGy2G023060	Cucumber (Gy14) v2	cgybcmaB258

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh05G003920	Cucumber (Gy14) v2	cgybcmaB422
CmaCh05G003920	Melon (DHL92) v3.6.1	cmamedB818
CmaCh05G003920	Melon (DHL92) v3.6.1	cmamedB828
CmaCh05G003920	Silver-seed gourd	carcmaB0189
CmaCh05G003920	Silver-seed gourd	carcmaB1357
CmaCh05G003920	Cucumber (Chinese Long) v3	cmacucB0935
CmaCh05G003920	Cucumber (Chinese Long) v3	cmacucB0940
CmaCh05G003920	Watermelon (97103) v2	cmawmbB818
CmaCh05G003920	Watermelon (97103) v2	cmawmbB829
CmaCh05G003920	Watermelon (97103) v2	cmawmbB832
CmaCh05G003920	Wax gourd	cmawgoB0939
CmaCh05G003920	Wax gourd	cmawgoB0964
CmaCh05G003920	Cucurbita maxima (Rimu)	cmacmaB199
CmaCh05G003920	Cucurbita maxima (Rimu)	cmacmaB434
CmaCh05G003920	Cucumber (Gy14) v1	cgycmaB0462
CmaCh05G003920	Cucumber (Gy14) v1	cgycmaB0874
CmaCh05G003920	Cucurbita moschata (Rifu)	cmacmoB770
CmaCh05G003920	Cucurbita moschata (Rifu)	cmacmoB783
CmaCh05G003920	Wild cucumber (PI 183967)	cmacpiB806
CmaCh05G003920	Cucumber (Chinese Long) v2	cmacuB792
CmaCh05G003920	Cucumber (Chinese Long) v2	cmacuB797
CmaCh05G003920	Melon (DHL92) v3.5.1	cmameB733
CmaCh05G003920	Watermelon (Charleston Gray)	cmawcgB700
CmaCh05G003920	Watermelon (97103) v1	cmawmB753
CmaCh05G003920	Watermelon (97103) v1	cmawmB756
CmaCh05G003920	Cucurbita pepo (Zucchini)	cmacpeB766
CmaCh05G003920	Cucurbita pepo (Zucchini)	cmacpeB778
CmaCh05G003920	Cucurbita pepo (Zucchini)	cmacpeB797
CmaCh05G003920	Bottle gourd (USVL1VR-Ls)	cmalsiB727
CmaCh05G003920	Bottle gourd (USVL1VR-Ls)	cmalsiB739