CmoCh05G004000 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G004000
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Plant protein of unknown function (DUF247)
Location	Cmo_Chr05 : 1810114 .. 1811535 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATGGTCAGATTGGAGTTCATCAAGCAAATGACATATCATACATTATGACAGAAATTAGTGAAGTTGAACAACTTTGTGGTAATCTTGTAATATCCATAAAAAAAAGGATGGAACAATTACCTCCGGTTAATGAAGAATGTAGCATATTGAAAATTTCGAGTCCCTCAAGTCATTTCCATCAGTCCATTTCACCATCGTAGTCCAGATTTGATAACCACAGAACGATATAAGGTTCAAGGTTTTGATAACTTTCTAATGCGAGTAATAAGATGAAATGTTTGAATAACCCGAAGAACCCACTGGAGGTCCTTGTGAGAAATACTCAACGTTACGTTGCAGAATATTGAAATTGCTATGCTGAACCCATAAACATGAATGACATGGATTTTATTGAAATAATGATTATGGATGGTTGTTTCGTAGTGGAGTTTTTGATACTGTACTATGAAAAATACCAATGGACGGTAGATTATTCATTCTACAAAAGAATCCCTCGTATACATCCTAAAATTCCAAACAATCTTAGATTATTCATTCTACAAAAGAATCCCTGATATAGATCTTGATTTGATTAAGCTGAAAAATCAAATCCCTTTCTCGGTTCTTAAATGTATGTTCAAACTTATACTAGAAGATGATACCTCCATCTCCGTTATAGAGTTTGCATACATGTTTTTGCAACATGGATTGGTACATCCATATAAACTTTCTACTCCCTTGTCGAGAATACCGAAGCACTTCATCGATTTTTTAAGCTTGCACTTTGTCGTTCCCACAAGGCCTGCCTTTTGTGGTCAACGTTGATAAAACCAAATTGATTATTTCTCCATCAATAACTAAGCTCTCTCAAGTTGGCGTCACCATCAAGAAAGCAGGAGATGCCAAATTTGTGATGGACATAAGCTTTAAAAATGAGGTTTTCAAAATTCCACCTTTAGGGATTGATGATAACTTTGAAACCATGATTCGAAACTTGATAGCATTTGAGCAAATTTCCTTAGCAAAGGAGAACAAGTGTATCCAATATATCACATTCATGGATTATTTGATAAGCACAGAGGAAGACGTGAATTTACTTGAGAATGCCGGAATTATAATCAACGATATTGGAGGCAGTGCTAATGAAGTTGCAAAACTGTTTAACGATCTCTGTAAATTTGCCACAGTCCCACATGATACCTACTTCAACATTATCAGTGCTAGCTTACATGAGCACTGCAATAAACGTTGGAACAGCGCGAAAGCTATACTCAAACGTGACTATTTTTATACACCATGGGCTTGTGTCGCTGCTTTTGGTGCTGTCTCGGTCATTATTTTGGCCCTCCTTCAAACTATATTTTCTGATATATTTACATTTCATGAATCGTCAGATTTTTTTTAAAAATTTTGCTCAGTTGCTCCTTACCTTGTAA

mRNA sequence

ATGGAAAATGGTCAGATTGGAGTTCATCAAGCAAATGACATATCATACATTATGACAGAAATTAGTGAAGTTGAACAACTTTGTGGTAATCTTGTAATATCCATAAAAAAAAGGATGGAACAATTACCTCCGCTCTCTCAAGTTGGCGTCACCATCAAGAAAGCAGGAGATGCCAAATTTGTGATGGACATAAGCTTTAAAAATGAGGTTTTCAAAATTCCACCTTTAGGGATTGATGATAACTTTGAAACCATGATTCGAAACTTGATAGCATTTGAGCAAATTTCCTTAGCAAAGGAGAACAAGTGTATCCAATATATCACATTCATGGATTATTTGATAAGCACAGAGGAAGACGTGAATTTACTTGAGAATGCCGGAATTATAATCAACGATATTGGAGGCAGTGCTAATGAAGTTGCAAAACTGTTTAACGATCTCTGTAAATTTGCCACAGTCCCACATGATACCTACTTCAACATTATCAGTGCTAGCTTACATGAGCACTGCAATAAACGTTGGAACAGCGCGAAAGCTATACTCAAACGTGACTATTTTTATACACCATGGGCTTGTGTCGCTGCTTTTGGTGCTGTCTCGTTGCTCCTTACCTTGTAA

Coding sequence (CDS)

ATGGAAAATGGTCAGATTGGAGTTCATCAAGCAAATGACATATCATACATTATGACAGAAATTAGTGAAGTTGAACAACTTTGTGGTAATCTTGTAATATCCATAAAAAAAAGGATGGAACAATTACCTCCGCTCTCTCAAGTTGGCGTCACCATCAAGAAAGCAGGAGATGCCAAATTTGTGATGGACATAAGCTTTAAAAATGAGGTTTTCAAAATTCCACCTTTAGGGATTGATGATAACTTTGAAACCATGATTCGAAACTTGATAGCATTTGAGCAAATTTCCTTAGCAAAGGAGAACAAGTGTATCCAATATATCACATTCATGGATTATTTGATAAGCACAGAGGAAGACGTGAATTTACTTGAGAATGCCGGAATTATAATCAACGATATTGGAGGCAGTGCTAATGAAGTTGCAAAACTGTTTAACGATCTCTGTAAATTTGCCACAGTCCCACATGATACCTACTTCAACATTATCAGTGCTAGCTTACATGAGCACTGCAATAAACGTTGGAACAGCGCGAAAGCTATACTCAAACGTGACTATTTTTATACACCATGGGCTTGTGTCGCTGCTTTTGGTGCTGTCTCGTTGCTCCTTACCTTGTAA

Homology

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BLAST of CmoCh05G004000 vs. Swiss-Prot
Match: Y3720_ARATH (UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13
Identity = 43/144 (29.86%), Postives = 72/144 (50.00%), Query Frame = 1


Query: 61  VMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDV 120
           ++++  K    +IP L  D    +   N +AFEQ      N+   YI FM  L++ EEDV
Sbjct: 302 ILNVRLKKNKLQIPQLRFDGFISSFFLNCVAFEQFYTDSSNEITTYIVFMGCLLNNEEDV 361

Query: 121 NLLENAGIIINDIGGSANEVAKLFNDLCKFATVPHDT-YFNIISASLHEHCNKRWNSAKA 180
             L N  +II +  GS NEV++ F  + K      DT Y N +   ++E+  K +N   A
Sbjct: 362 TFLRNDKLIIENHFGSNNEVSEFFKTISKDVVFEVDTSYLNNVFKGVNEYTKKWYNGLWA 421

Query: 181 ILKRDYFYTPWACVAAFGAVSLLL 204
             +  +F +PW  +++   + ++L
Sbjct: 422 GFRHTHFESPWTFLSSCAVLFVIL 445

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BLAST of CmoCh05G004000 vs. Swiss-Prot
Match: Y3264_ARATH (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.1e-09
Identity = 36/133 (27.07%), Postives = 67/133 (50.38%), Query Frame = 1


Query: 71  FKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIII 130
           F +P + +D N ET++RNL+A+E  + +      +Y   ++ +I +EEDV LL   G+++
Sbjct: 378 FYLPVINLDINTETVLRNLVAYEATNTSGPLVFTRYTELINGIIDSEEDVRLLREQGVLV 437

Query: 131 NDIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPW 190
           + +  S  E A+++N + K   +    + +     ++ +   RW      L   Y Y  W
Sbjct: 438 SRL-KSDQEAAEMWNGMSKSVRLTKVGFLDKTIEDVNRYYTGRWKVKIGRLVEVYVYGSW 497

Query: 191 ACVAAFGAVSLLL 204
             +A   AV LL+
Sbjct: 498 QILAFLAAVLLLM 509

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BLAST of CmoCh05G004000 vs. TrEMBL
Match: A0A0A0LM96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-42
Identity = 96/170 (56.47%), Postives = 122/170 (71.76%), Query Frame = 1


Query: 42  LPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISL 101
           +PP    L + GVTIKKA + K +M+I F+N + +IPPL IDD FE M+RNL+AFE   +
Sbjct: 263 IPPSITELCEAGVTIKKAENTKCLMNIRFENGILEIPPLHIDDYFEPMMRNLLAFEHFPV 322

Query: 102 AKENK-CIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKF-ATVPH 161
              N   I Y+TFMDYLISTE+DVNLL    IIINDIGGS  EV++LFN+LCKF ++ P+
Sbjct: 323 EVNNTYVIPYVTFMDYLISTEKDVNLLVKEKIIINDIGGSDREVSQLFNNLCKFVSSSPN 382

Query: 162 DTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLLTL 206
           D YFN IS  L EHC++ WN AKA LK +YF TPWA + +F A ++LL L
Sbjct: 383 DNYFNNISEGLREHCDRWWNKAKASLKHNYFNTPWAAI-SFSAATVLLVL 431

[Close]

BLAST of CmoCh05G004000 vs. TrEMBL
Match: A0A0A0LLX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.9e-39
Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 1


Query: 42  LPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISL 101
           +PP    L + GVTIKKA + K +M+I FKN + +IPPL IDD FE M+R+L+AFE   +
Sbjct: 292 IPPSITELFEAGVTIKKAENTKCLMNIKFKNGILEIPPLHIDDYFEPMMRDLLAFEHFPI 351

Query: 102 AKENK-CIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKFATVP-H 161
             +N   I YITFMDYLISTE DVNLL    IIINDIGGS  EV++LFN+LCKF +   +
Sbjct: 352 EVQNTYVIPYITFMDYLISTENDVNLLVKEKIIINDIGGSDREVSQLFNNLCKFVSSSFN 411

Query: 162 DTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL 204
           + YFN IS  L +HC++ WN AKA LK +Y  TPWA ++   A+ LL+
Sbjct: 412 NIYFNDISERLRKHCDRWWNKAKATLKHNYCNTPWAFISFLAALILLI 459

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BLAST of CmoCh05G004000 vs. TrEMBL
Match: A0A0A0LSF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380060 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.4e-37
Identity = 86/161 (53.42%), Postives = 111/161 (68.94%), Query Frame = 1


Query: 45  LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENK-C 104
           L++ GVT+KKA + + +M+I+F N V +IPPL I D FE + RNL+AFEQ          
Sbjct: 337 LNESGVTVKKAKNVESLMNITFTNGVLEIPPLNICDEFELLFRNLVAFEQFQAGNGKMYA 396

Query: 105 IQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKFAT-VPHDTYFNII 164
            QYI FMD LI+T++DV LL N+G+IIN+IGGS  EV+KLFN L KF +  P  + FN I
Sbjct: 397 TQYIIFMDNLINTKKDVRLLVNSGVIINNIGGSYKEVSKLFNKLGKFISGSPTSSEFNDI 456

Query: 165 SASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL 204
           S  LH+HCN+RWN AKA LK +YF TPWA V+   A  L+L
Sbjct: 457 SKDLHKHCNRRWNKAKASLKHNYFNTPWAIVSFIAASCLIL 497

[Close]

BLAST of CmoCh05G004000 vs. TrEMBL
Match: A0A0A0LQ64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381630 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.2e-36
Identity = 91/175 (52.00%), Postives = 117/175 (66.86%), Query Frame = 1


Query: 42  LPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQIS- 101
           +PP    LS+ GVT KK      + +I+FKN V +IPP+ ID  FET+ RNLIA+E +  
Sbjct: 328 IPPSITELSEAGVTFKKPKKLPIITNITFKNGVLEIPPIVIDHYFETITRNLIAYEHMDK 387

Query: 102 LAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKFATVPHD 161
           + KE K I YI FMDYLISTE+DV+LLE AGII+NDIGGS  EV+KLFN+L KF     +
Sbjct: 388 IYKEMKVISYILFMDYLISTEKDVSLLEKAGIIVNDIGGSHKEVSKLFNNLSKFVNRSDN 447

Query: 162 T-----YFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGA-VSLLLTL 206
                  F  IS +L EH ++RWN  KA LK +YF TPWA ++ F A + ++LTL
Sbjct: 448 NSEYFKKFQGISKALCEHRDRRWNKLKASLKHNYFNTPWASISVFAATLVIVLTL 502

[Close]

BLAST of CmoCh05G004000 vs. TrEMBL
Match: A0A0A0LQ57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.5e-35
Identity = 85/178 (47.75%), Postives = 112/178 (62.92%), Query Frame = 1


Query: 33  ISIKKRMEQLPP----LSQVGVTIK--KAGDAKFVMDISFKNEVFKIPPLGIDDNFETMI 92
           + I K+    PP    L + GVTIK  K  +    M+ISFKN V +IPP+ I+  FE +I
Sbjct: 282 VKISKQWRLSPPTTTELCEAGVTIKVAKRKNNLCFMNISFKNGVLEIPPIVIEGTFEVLI 341

Query: 93  RNLIAFEQISLAKENK-CIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFN 152
           RN++AFE      + K  IQY+TF+D LISTE+D+ LL  AG+IIND GGS  EV++LFN
Sbjct: 342 RNVLAFEIFPAGNQKKYAIQYVTFLDDLISTEKDLCLLVKAGVIINDTGGSDKEVSELFN 401

Query: 153 DLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL 204
            L K  T P  +YF+  S +L  HC+  WN AKA LK  YF TPWA ++ F A  L++
Sbjct: 402 SLTKLVTTPLPSYFDDTSKALRVHCDGSWNKAKASLKHSYFNTPWAIISFFAATFLII 459

[Close]

BLAST of CmoCh05G004000 vs. TAIR10
Match: AT4G31980.1 (AT4G31980.1 unknown protein)

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-27
Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 1


Query: 45  LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCI 104
           L   GV  K A  +  ++DISF + V KIP + +DD  E++ +N+I FEQ   + +N  +
Sbjct: 511 LHTAGVRFKPAETSSCLLDISFADGVLKIPTIVVDDLTESLYKNIIGFEQCRCSNKN-FL 570

Query: 105 QYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKFATVPHDTYFNIISA 164
            YI  +   I +  D +LL ++GII+N +G S  +V+ LFN + K        YF+++S 
Sbjct: 571 DYIMLLGCFIKSPTDADLLIHSGIIVNYLGNSV-DVSNLFNSISKEVIYDRRFYFSMLSE 630

Query: 165 SLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL 204
           +L  +CN  WN  KAIL+RDYF+ PWA  + F A+ LLL
Sbjct: 631 NLQAYCNTPWNRWKAILRRDYFHNPWAVASVFAALLLLL 667

[Close]

BLAST of CmoCh05G004000 vs. TAIR10
Match: AT3G50170.1 (AT3G50170.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 112.8 bits (281), Expect = 2.4e-25
Identity = 70/174 (40.23%), Postives = 97/174 (55.75%), Query Frame = 1


Query: 35  IKKRMEQL----PPLSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLI 94
           + KR +QL      L + GV  +K    +F  DI FKN   +IP L I D  +++  NLI
Sbjct: 350 VDKRQQQLVHCVTELREAGVKFRKRKTDRF-WDIEFKNGYLEIPKLLIHDGTKSLFSNLI 409

Query: 95  AFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKF 154
           AFEQ  +   N    YI FMD LI++ EDV+ L   GII + + GS +EVA LFN LC+ 
Sbjct: 410 AFEQCHIESSNHITSYIIFMDNLINSSEDVSYLHYCGIIEHWL-GSDSEVADLFNRLCQE 469

Query: 155 ATV-PHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL 204
               P D++ + +S  ++ + N++WN  KA L   YF  PWA  +   AV LLL
Sbjct: 470 VVFDPKDSHLSRLSGDVNRYYNRKWNVLKATLTHKYFNNPWAYFSFSAAVILLL 521

[Close]

BLAST of CmoCh05G004000 vs. TAIR10
Match: AT3G50150.1 (AT3G50150.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 108.6 bits (270), Expect = 4.6e-24
Identity = 62/141 (43.97%), Postives = 84/141 (59.57%), Query Frame = 1


Query: 63  DISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNL 122
           DI FKN   KIP L I D  +++  NLIAFEQ      N    YI FMD LI++ +DV+ 
Sbjct: 351 DIEFKNGYLKIPKLLIHDGTKSLFSNLIAFEQCHTQSSNNITSYIIFMDNLINSSQDVSY 410

Query: 123 LENAGIIINDIGGSANEVAKLFNDLCKFATV-PHDTYFNIISASLHEHCNKRWNSAKAIL 182
           L + GII + + GS +EVA LFN LCK     P D Y + +S  ++ + +++WNS KA L
Sbjct: 411 LHHDGIIEHWL-GSDSEVADLFNRLCKEVIFDPKDGYLSQLSREVNRYYSRKWNSLKATL 470

Query: 183 KRDYFYTPWACVAAFGAVSLL 203
           ++ YF  PWA  +   AV LL
Sbjct: 471 RQKYFNNPWAYFSFSAAVILL 490

[Close]

BLAST of CmoCh05G004000 vs. TAIR10
Match: AT3G50130.1 (AT3G50130.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 108.2 bits (269), Expect = 6.0e-24
Identity = 68/172 (39.53%), Postives = 94/172 (54.65%), Query Frame = 1


Query: 37  KRMEQL----PPLSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAF 96
           KR +QL      L + G+  +     +F  DI FKN   +IP L I D  +++  NLIAF
Sbjct: 377 KRQQQLIHCVTELREAGIKFRTRKTDRF-WDIRFKNGYLEIPKLLIHDGTKSLFSNLIAF 436

Query: 97  EQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLC-KFA 156
           EQ  +   N    YI FMD LI + EDV  L   GII + +G    EVA LFN LC + A
Sbjct: 437 EQCHIDSSNDITSYIIFMDNLIDSSEDVRYLHYCGIIEHWLGND-YEVADLFNRLCQEVA 496

Query: 157 TVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL 204
             P ++Y + +S  +  + +++WN  KAILK  YF  PWA  + F A+ LL+
Sbjct: 497 FDPQNSYLSQLSNKVDRNYSRKWNVLKAILKHKYFNNPWAYFSFFAALVLLV 546

[Close]

BLAST of CmoCh05G004000 vs. TAIR10
Match: AT3G50160.1 (AT3G50160.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-23
Identity = 67/174 (38.51%), Postives = 95/174 (54.60%), Query Frame = 1


Query: 35  IKKRMEQL----PPLSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLI 94
           + K+ +QL      L   GV   +     F  DI FKN   KIP L I D  +++  NLI
Sbjct: 312 VNKQPQQLIHCVTELRNAGVEFMRKETGHF-WDIEFKNGYLKIPKLLIHDGTKSLFLNLI 371

Query: 95  AFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKF 154
           AFEQ  +    K   YI FMD LI++ EDV+ L + GII N + GS +EV+ LFN L K 
Sbjct: 372 AFEQCHIKSSKKITSYIIFMDNLINSSEDVSYLHHYGIIENWL-GSDSEVSDLFNGLGKE 431

Query: 155 ATV-PHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL 204
               P+D Y + ++  ++ +  ++WN  KA L+  YF  PWA  +   AV+LL+
Sbjct: 432 VIFDPNDGYLSALTGEVNIYYRRKWNYLKATLRHKYFNNPWAYFSFIAAVTLLI 483

[Close]

BLAST of CmoCh05G004000 vs. NCBI nr
Match: gi|659088836|ref|XP_008445187.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 8.4e-44
Identity = 98/175 (56.00%), Postives = 121/175 (69.14%), Query Frame = 1


Query: 34  SIKKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNL 93
           +I+++   +PP    L + GVTIKKA  AK + DI+FKN V +IPPL I D FE ++RN+
Sbjct: 272 TIEEKNRWIPPSITELREAGVTIKKAEKAKHLTDITFKNGVLRIPPLHIYDEFELVLRNM 331

Query: 94  IAFEQISLAKENK-CIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLC 153
           +AFEQIS  K NK  IQY+ FMD LISTE+DV LL  AG+IIN IGGS  EVA LFN+ C
Sbjct: 332 VAFEQISARKMNKYVIQYVLFMDDLISTEKDVRLLVEAGVIINQIGGSDKEVADLFNNFC 391

Query: 154 KFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL 204
           KF T P  + F+ I   L EHCN RWN AKA LK +YF TPWA ++ F A  L+L
Sbjct: 392 KFITAPKSSNFDSIIKDLCEHCNGRWNRAKASLKHNYFNTPWAFISFFAATLLIL 446

[Close]

BLAST of CmoCh05G004000 vs. NCBI nr
Match: gi|700207809|gb|KGN62928.1| (hypothetical protein Csa_2G380080 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 1.6e-42
Identity = 96/170 (56.47%), Postives = 122/170 (71.76%), Query Frame = 1


Query: 42  LPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISL 101
           +PP    L + GVTIKKA + K +M+I F+N + +IPPL IDD FE M+RNL+AFE   +
Sbjct: 263 IPPSITELCEAGVTIKKAENTKCLMNIRFENGILEIPPLHIDDYFEPMMRNLLAFEHFPV 322

Query: 102 AKENK-CIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKF-ATVPH 161
              N   I Y+TFMDYLISTE+DVNLL    IIINDIGGS  EV++LFN+LCKF ++ P+
Sbjct: 323 EVNNTYVIPYVTFMDYLISTEKDVNLLVKEKIIINDIGGSDREVSQLFNNLCKFVSSSPN 382

Query: 162 DTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLLTL 206
           D YFN IS  L EHC++ WN AKA LK +YF TPWA + +F A ++LL L
Sbjct: 383 DNYFNNISEGLREHCDRWWNKAKASLKHNYFNTPWAAI-SFSAATVLLVL 431

[Close]

BLAST of CmoCh05G004000 vs. NCBI nr
Match: gi|659088838|ref|XP_008445188.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 172.2 bits (435), Expect = 9.6e-40
Identity = 90/169 (53.25%), Postives = 120/169 (71.01%), Query Frame = 1


Query: 42  LPP----LSQVGVTIKKAG-DAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQIS 101
           +PP    + + GVTIKKA  + K +++I F+N + +IPPL IDD FE M+RNL+AFE   
Sbjct: 298 IPPSITEICEAGVTIKKADKNTKCLLNIRFENGILEIPPLHIDDYFEPMMRNLLAFEHFP 357

Query: 102 LAKENK-CIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKF-ATVP 161
           +  +N   I Y+TFMDYLI TE+DVNLL    IIINDIGGS  EV++LFN+LCKF ++ P
Sbjct: 358 VEVKNTYVIPYLTFMDYLIITEKDVNLLVKEKIIINDIGGSDREVSQLFNNLCKFVSSSP 417

Query: 162 HDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL 204
           +D YFN  S +L +HC++RWN AKA LK +YF TPWA ++   A  LL+
Sbjct: 418 NDNYFNDTSKALRDHCDRRWNKAKASLKHNYFNTPWAAISVSAATFLLV 466

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BLAST of CmoCh05G004000 vs. NCBI nr
Match: gi|778674379|ref|XP_011650197.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 2.8e-39
Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 1


Query: 42  LPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISL 101
           +PP    L + GVTIKKA + K +M+I FKN + +IPPL IDD FE M+R+L+AFE   +
Sbjct: 292 IPPSITELFEAGVTIKKAENTKCLMNIKFKNGILEIPPLHIDDYFEPMMRDLLAFEHFPI 351

Query: 102 AKENK-CIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKFATVP-H 161
             +N   I YITFMDYLISTE DVNLL    IIINDIGGS  EV++LFN+LCKF +   +
Sbjct: 352 EVQNTYVIPYITFMDYLISTENDVNLLVKEKIIINDIGGSDREVSQLFNNLCKFVSSSFN 411

Query: 162 DTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL 204
           + YFN IS  L +HC++ WN AKA LK +Y  TPWA ++   A+ LL+
Sbjct: 412 NIYFNDISERLRKHCDRWWNKAKATLKHNYCNTPWAFISFLAALILLI 459

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BLAST of CmoCh05G004000 vs. NCBI nr
Match: gi|659089573|ref|XP_008445583.1| (PREDICTED: LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38
Identity = 92/161 (57.14%), Postives = 112/161 (69.57%), Query Frame = 1


Query: 45  LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENK-C 104
           L + GVTI+KA +AK++ +I+FKN V KIP L I D FE M RNLIAFEQ     EN   
Sbjct: 395 LCESGVTIEKAKNAKYLTNITFKNGVLKIPHLHIYDEFELMFRNLIAFEQFPAGNENMYA 454

Query: 105 IQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKFAT-VPHDTYFNII 164
            QYI FMD LISTE+DV LL N+G+IIN+IGGS  EV++LFN+L KF    P    FN I
Sbjct: 455 TQYILFMDDLISTEKDVRLLVNSGVIINNIGGSDKEVSELFNNLGKFVNQCPSPYMFNHI 514

Query: 165 SASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL 204
           S +L +HCN RWN AKA LK +YF TPWA ++ F A  L+L
Sbjct: 515 SKALRKHCNGRWNKAKASLKHNYFNTPWAFISFFAASFLVL 555

The following BLAST results are available for this feature:

BLAST of CmoCh05G004000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3720_ARATH	1.2e-13	29.86	UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=1	[more]
Y3264_ARATH	5.1e-09	27.07	Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=...	[more]

BLAST of CmoCh05G004000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM96_CUCSA	1.1e-42	56.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1	[more]
A0A0A0LLX1_CUCSA	1.9e-39	54.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1	[more]
A0A0A0LSF4_CUCSA	1.4e-37	53.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380060 PE=4 SV=1	[more]
A0A0A0LQ64_CUCSA	1.2e-36	52.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381630 PE=4 SV=1	[more]
A0A0A0LQ57_CUCSA	6.5e-35	47.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1	[more]

BLAST of CmoCh05G004000 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31980.1	2.0e-27	39.62	unknown protein	[more]
AT3G50170.1	2.4e-25	40.23	Plant protein of unknown function (DUF247)	[more]
AT3G50150.1	4.6e-24	43.97	Plant protein of unknown function (DUF247)	[more]
AT3G50130.1	6.0e-24	39.53	Plant protein of unknown function (DUF247)	[more]
AT3G50160.1	1.7e-23	38.51	Plant protein of unknown function (DUF247)	[more]

BLAST of CmoCh05G004000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088836\|ref\|XP_008445187.1\|	8.4e-44	56.00	PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]	[more]
gi\|700207809\|gb\|KGN62928.1\|	1.6e-42	56.47	hypothetical protein Csa_2G380080 [Cucumis sativus]	[more]
gi\|659088838\|ref\|XP_008445188.1\|	9.6e-40	53.25	PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]	[more]
gi\|778674379\|ref\|XP_011650197.1\|	2.8e-39	54.17	PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus]	[more]
gi\|659089573\|ref\|XP_008445583.1\|	1.1e-38	57.14	PREDICTED: LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004158	DUF247_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G004000.1	CmoCh05G004000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004158	Protein of unknown function DUF247, plant	PFAM	PF03140	DUF247	coord: 36..203 score: 2.2
None	No IPR available	PANTHER	PTHR31549	FAMILY NOT NAMED	coord: 45..203 score: 4.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G004000	CmaCh05G003920	Cucurbita maxima (Rimu)	cmacmoB786
CmoCh05G004000	Bhi04G000800	Wax gourd	cmowgoB0940

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G004000	Cucurbita moschata (Rifu)	cmocmoB156
CmoCh05G004000	Cucumber (Gy14) v1	cgycmoB0463
CmoCh05G004000	Cucurbita maxima (Rimu)	cmacmoB199
CmoCh05G004000	Wild cucumber (PI 183967)	cmocpiB788
CmoCh05G004000	Cucumber (Chinese Long) v2	cmocuB785
CmoCh05G004000	Melon (DHL92) v3.5.1	cmomeB716
CmoCh05G004000	Watermelon (Charleston Gray)	cmowcgB716
CmoCh05G004000	Watermelon (97103) v1	cmowmB748
CmoCh05G004000	Cucurbita pepo (Zucchini)	cmocpeB720
CmoCh05G004000	Cucurbita pepo (Zucchini)	cmocpeB750
CmoCh05G004000	Bottle gourd (USVL1VR-Ls)	cmolsiB730
CmoCh05G004000	Bottle gourd (USVL1VR-Ls)	cmolsiB731
CmoCh05G004000	Cucumber (Gy14) v2	cgybcmoB244
CmoCh05G004000	Melon (DHL92) v3.6.1	cmomedB813
CmoCh05G004000	Silver-seed gourd	carcmoB0196
CmoCh05G004000	Silver-seed gourd	carcmoB1319
CmoCh05G004000	Cucumber (Chinese Long) v3	cmocucB0925
CmoCh05G004000	Watermelon (97103) v2	cmowmbB802