CmaCh05G003860 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh05G003860
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	ATP-dependent RNA helicase
Location	Cma_Chr05 : 1695936 .. 1702730 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCTTGCAGATTGCAGGAGAGTGGGAGCATTTGAGTTCGCAAATGTAAGATCCGAAGGGGAATGTATAAGCTTGTGGTACACTTGGGTAGCTTCTGGAGTAAGATTTGGGAGTGATCTAATTGTTGAATATAGAATATTGACCGAGTGAAATTGGAATCGAACCCTTTGTGGGTCTCATTGGTCTTCATATATTCACAAAATTAATGAATTCTGCTTTTGGTCCTTTGTGTCTGTCTTTGGCCTTAGCTCAAATCCCTAAACTTTTATATAAATAGCAATTTAATCCATAAACGGTAATAAATCGTATATAATTAAATACATGATATTTCTATATTTATAGTTTATAAATAATTTTGATTCTTAATCAATTTATCAATCACGTATAATAAATTTTATTAAATATTAAAAAAAATTCAGACTAAATAATTACAAATTATAGAATCAAATTCTTACTTCTAAAAATTTAAATATTAAATTGTTAAAAAATTAATAATTTAAAGAGAAAGTTGTTGCAAATTACAATTTATGTATGAAATTATTATTTCTTAAAACTTAAAAAAAAAAAAAGTGTGAATAGATATGAATATATTATTACTCGACGAAATAATACATAAAAATGATAAATATAATTGGGATCGAAGGTTAAATGTTTATTGATATTCACAACCTTTTATAAGATACTAACTAATACCTACTAACAAGAAAATATAAAATAACTAAATCTCGAAAATAAAATAAAATTTACTACTATTCAAATTTAACTTATTACAAATATCTAAGATATATTCCGTCACTAATATATTCTTCAAATATTAAATGATTACGAATATCATATATTTCATAATTAATTTAAACTAGAAATAAGTTTGACTAATTATTACATAAATTTAATTGATTTACAAATTAGAGAGATTTTTTTGGCGGTTTAAAGTTTTAGAATTGAGTCCGACCATACCTAATAAATTGGATTTATGAAATCCAATTGAATTTGATCGCAGTTTCGTGTTTCATGTGTCGTACTCCAACTAGAGCAAAAAGAAAAGGGATTGCAAACCTCCCGCCGAGAGGTCAAGGTATATGCTAACCCATGTTTTACTATTAAACTATCTTCACCCGCTACAACAAATAGCAATGTGAGCAAAATGACATTAATTGTAATACATAATTATATGATTCGATATCATATTTCATACATGAACCTCATAGGGTTCACCGTCTAAGTTGAAAATTCGGATTAATAAACTTAATTATTTGAATAAAGTCCACCATCTAACTCAACTCAAATTCTTTATTTTTGAGACGTAACTTTTTTATATTATTTATAATACATATTAGGCTAATAATTTTGATTTATTCATAAAATGTAAAAAAATATTTATTTATCAATTACCGTAAAATGGAAAACATTTTAGAAATTTGTTGTATTTAAAAATAATGGAAAAAAATGACAATAATGGGGCTGTCACATTTATCTCAATAATTCATTTTTGTCCAGTGTCAGATTAGGAGGGCGAGTTATCGTAAATAGAGGCAGGCAGCAAGGGTATTTTGGACAATACGTACAAGTATTCAGCCTTTATAACGGCACTCTCTTTTTCGGAACCCTAATAACCCCCTCCGCTCTTCCACCCTGCGCTCTACGATATTTGGAAACCCAGGTCTTAACATTTTCTCTCCAGCTAACTTACTTTTCCTTTGCAGACTTCGTGAAATCGCAACCAAACTCTTTAAGTCGAGTTCATAGCAGGCTACCAGGTAATCTCAATCACTCTGTTCGAAGCCTTAATTTTTTTTTTTTGATGTTTTAAACCCTAGTTTTGGTTTAGGGTTGGATTTGCTTTCTGTGATCTCGCAATTTAGTTTGTTCTCTGGGTTTTATGTGTAGGAAGAAATGGGAGAAACAAGAGAGAACGAATATGAGGAAGAGCTCCTCGACTACGAGGAAGAGGAAGAGAAGGCCCCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGTGAGTGGTCTATTACTTTGTTCTATATAGGTTTGCTTATGGATAAACTAATAGTCCAATACTTGACTGAGGTTTGTCGAACTCATTATATGATAAAATTTGAGATTTGGAAGTAATTTTATTCGTCTGGTAGAGTTGAGAGTTAAGGCGGGTTGGAATAAGTAGTTGTTTGAGCTTAAGTGAACTTAAATGAGATGATTTATTTTTCATGCTACATCTTTCTTGAAAAATATGCTTTTCCTTCCATTTTTGGGATTTTCCCCTGTATTATCGCATTTTTGTTTGGTCGAGATCCTTACCTTCTTTCTTTATCTTCGATTTTAGGGGTTATGTTGGAATTCATAGTTCGGGATTCAGAGACTTCCTATTGAAGCCAGAGCTTCTCCGTGCTATTGTAGACTCTGGGTTTGAGCATCCATCTGAAGGCAAATTTCTAATCTTTATTTTCAATAGATGAATCTTAAGACAAAGTGGCCATGTAATTTAAACTGGTACAATTATTCTTAAATTTTTTATTAGCAGGATTTTAAGGGAACATCTTTAAGACCTATTTTTTGCGGATGCAGTATCTCACTAACCCGTAACAAATATCTATCAACTCTGGTTTCATTTTGAAGTTCATAATTATTGGTTATTGGGTTTTGTAGCTGGTGTAGGATTTGTCAACTTATCACGTCATAAATAGGATAGAGTTAATTGGGTGTTGTGTTGGTATGTTATACGAATGGGTTTTTAGTTTATAATAGAAGCCTACGATGTTCATCACTTGTTACTGTGCTGCAGTCTTCATGTGTTCATGACCTTAATTTAACGCTTCCTTGAGAACGCTTGATGCTATTAATTTATAATCATGTTTCAAATAGAGAGAATTATTGACACATTTCTTGAACAGTATAGCATGGATGTACTCGCACTAACACATCAGTTTGGAATACTTGTCTTTATTGATTATGCTATTTCCATATGTTCTTATTGCTCTGTAAATATGATATTGCTTAAGCACATGTTTTTCTTAACCATCATGTGTTAGATGTTTATATAAGTTTTTTAATGGTTTGCAGGTAATAAATTAATATCATAATCTTGATTTTGGAGCAATGTATATGGTTTGATAAACCTTTCGCATAAAAGGATCGGAGACGTTATAATTTACTTACCAACGGTTCATTTGGTTCGATCCTTTTCTTTGGTTCTTCATCAGTGCAACACGAATGTATTCCCCAAGCTATTCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGCAAAACTGCTGTTTTTGTTCTGTCAACGCTGCAGCAGATTGACCCTGTTGCTGGTCAAGTCTCTGCACTAGTTCTGTGCCATACGAGGGAGCTTGCATACCAGGTGCATAAATGCGTTGCTTATGTTTTTAAATTTTCATTCTCTTAAAACATATACAGAATTTAATTCCTTGCATTATTTGTGTATCTAGCACTGACTCTTTTTTTGTACCACTTCAGATCTGTCACGAATTTGAGAGGTTCAGCACTTATCTTCCTGATCTGAAGGTTGCTGTCTTCTATGGTGGGGTGAATATTAAAATTCACAAAGATCTTCTGAAAAATGAATGTCCTCATATTGTTGTTGGAACACCTGGAAGGATACTGGCATTGTCAAGAGACAAGGACCTATCTCTGAAGAACGTCCGACATTTTATCTTGGATGAGTGTGACAAGATGCTTGAGTCCCTTGGTATATTTTCTTTTGATAATCATTTGTTCTTCAAAGTTCTATTAGATTCTCCACTTTATATTAGTTTATCCAAATTCTCTAGTTGTTTCCCTTCATCCTGGTCCTTTTATATCTCATGACTATGTTTTAATATATGTATAAATTGGCATTGGCTTATTTTCTTACTGTGCACTCTACATGTGCTCTACAGATATGCGGAGAGACGTACAGGAAATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTCTCTGCAACACTCAGCAAAGAAATCCGCCCAGTTTGCAAGAAGTTTATGCAAGATGTAATGTCCCACAGCTAGTAAACCTTGAATTTAGAAGTTTTTTCCCTTTAAATTTCACTGTCTCCTAGAGTTTTCAAATTGTGGTTTTTACAGTAGGGTTTCCTACTCGTTATTTGAGGGGGATCTGTTTAGTACTATCTTTTATCCGCCATCACCTACAGCTCGTGCGGGAATTTTCTATTCTTGGAGGAATAATAGTTGGTGATACTGTTTAGTGGTTCTGAAGTAGTAGTTGGTGATTGAAGCCACTCACTTCTTTCATCTTAGTCTCCCGTTGCATGTCACTTGTTATTCTCTTATTTGGTTATGGTTGTTGGATTCTGGTTCCAACTTCCAACTGTGCGGTCATGAGTATCCAAGTTAGGGGATGAGAAAAAAAAAAGGATCCTATTGGATTCTTGTGTATTAGTGTAATAGTCTGCATCTGCGGCATTTCTTGATGAATATAGACGTATCTGCAAGGGGAGGCAGAACAGTTGACCACAATCTTGATTCATGGGATGAACATGCTCTTTCATTTCCTTCATCTTGAGGAAGTATTATGATTTACCATGACGTTTGTTCCTTTCAGCCAATGGAAATATATGTAGATGACGAGGCAAAGCTGACCTTGCATGGTCTTGTCCAGGTACATGGTTGTGACATTGAATGAATAGATTGTCCTTTTTTTTTAGCTTTCCCTAAAATTTGTTTTGGGAATGTCAGCATTACATCAAATTGAGCGAGATGGAGAAAAATCGGAAGCTGAATGATCTCCTTGATGCTTTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAGTAGAGCAGCTGAGCTGGATAAGTTGTTGGTGGAGTGTAATTTTCCCTCTATATGCATCCACTCTGGCATGTCTCAAGAAGAGAGGTAGGTCCAACATTTTTTTTTCAGGTTCAAAAATTTCATATTCATTTATGCCTCGGTATATTGATTTTTCATTTATTAATGTTACTACTAAAGGGCATGCAAAACGTTGTTCTTCATGTTTGAGGTTAGCTATGGTATAGTTACTGAAGTGTTTTTGTTGAAATTTGAATTTTCATCTTCTTCTTGTCCTTATTTTTATTTTCCTTTTACATTTGAATTCTCTAGATGTAGAACTTTTGTCCCTGCAAGGTGTTATACTTTATTAACGTTGGGAAGTTGTGAAATTGCCCATTTCATTTTGTTATTTATGTTTGAAGGTGGTTGATCTTCTTGAGGTCAGTGACTAATATAAAAAGATGATGTGCCAGGTTGACTCGATACAAGGGCTTTAAAGAAGGACATAAGCGGATTCTTGTGGCAACAGATTTGGTTGGTCGAGGAATTGACATTGAACGTGTAAACATTGTCATCAATTATGACATGCCAGATTCTGCTGATACTTATTTGCACAGGGTAAAGTGGACCTACTTATTTTAATGTTCATCATGCATACATTGTGCTTCCCGAGTGTGTATAATGAGTCTTCCTTTGAATATCCTACAGGTCGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACCTTTGTATCATCTGCAGCTGATTCTGATGTTCTCAATAATGTATGTAATTTCCAGTTGTTACATAGTGTGGCCATTAGATGGTTGTTTTCATAGTCTTGGTTATTGTAGGTTCAAGAAAGGTTCGAAGTCGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACATACAGTATGTTTTCTTGTTTCCTTCTTTTGAGATTATTCTCCATTTTGAACTCCAATTCCTCGTAGTTTACGTTTTATCCTTCATTTGATATTATATCATTATCATTTAATTTTCCCTTTTCCCTGTCGTGTGGTAAATTTTTGCTCATTTAGACATGATTTTTAATGGGTAAACCTCGGCACTGTCTTCTTTTTTTTATCTTTTTGTTGTCACTTGTCAGTCGGTTGCAATTAAATTTTCAATGGTAAATTCAATCCCATGGTTTAAAAGGAACACGTTAATATTTGTCTGTCTTTGCATTTTCCGCTCTGTTGGTTGCATCTTGTAAATTCTAAAAGCTCCACGTTCTTTCAACGTATGTACAATAGAATTTGTCCTATTAGTCAGACAATCAAGAGTTTTCTCTGCTATGTTTCTACGTTCTTCTCATGAGTTATGCCAAATTTTTCTCTTTTTGGTTGCAGTGCCATCATAGACGTAGAGATCATCAGCATAGAAATCGGCTACCTGGGTTGGTGAGGGTGGTTCACATATCATTGTGGTTTGATTTTGATTCGGACTAAAAATGGATGGAAGCCACTGCACTCACTAGCTTTGATGTGAACGAGGGCAATGGTGGATGCGCCAAATGTGGGTGGTGGGGTGGGTGTATACGCTGCCATTTGAGTTTATTGTATTCTAATTGCTGGGGCTGTCTTGCATGGAAGAAGTCTCTATATGCGTTTTATCCTGAATCGCGAATGATACAACAAATGTATTACTTTAGATATTCCTCTCTGCAAGACTAACAATAACGGTAGACTGGTTGGTTGGTAGTATTTGCAGTGATTTTATCGGATTCCTTATGTGAACCCATTTCCCCAAGTTCCATGGCTTCACCTGGTTCTCTCGTTACTGCCTATTGCTGATGTTTTGATGCGAATTTTACTGGAGATTTAGCTTGCAAATCAACATACCAAGTTTTGTGAATGAGATGTTCATAAATTAGATGCCTGAAATCGATTTCGTATTCTGTTTTAGCCATTCTTGTGATTCTAGAAGTGTTAGC

mRNA sequence

ATGATCCTTGCAGATTGCAGGAGAGTGGGAGCATTTGAGTTCGCAAATGTAAGATCCGAAGGGGAATGTATAAGCTTGTGGTACACTTGGGTAGCTTCTGGAGTCTTAACATTTTCTCTCCAGCTAACTTACTTTTCCTTTGCAGACTTCGTGAAATCGCAACCAAACTCTTTAAGTCGAGTTCATAGCAGGCTACCAGAAATGGGAGAAACAAGAGAGAACGAATATGAGGAAGAGCTCCTCGACTACGAGGAAGAGGAAGAGAAGGCCCCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGGGTTATGTTGGAATTCATAGTTCGGGATTCAGAGACTTCCTATTGAAGCCAGAGCTTCTCCGTGCTATTGTAGACTCTGGGTTTGAGCATCCATCTGAAGTGCAACACGAATGTATTCCCCAAGCTATTCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGCAAAACTGCTGTTTTTGTTCTGTCAACGCTGCAGCAGATTGACCCTGTTGCTGGTCAAGTCTCTGCACTAGTTCTGTGCCATACGAGGGAGCTTGCATACCAGATCTGTCACGAATTTGAGAGGTTCAGCACTTATCTTCCTGATCTGAAGGTTGCTGTCTTCTATGGTGGGGTGAATATTAAAATTCACAAAGATCTTCTGAAAAATGAATGTCCTCATATTGTTGTTGGAACACCTGGAAGGATACTGGCATTGTCAAGAGACAAGGACCTATCTCTGAAGAACGTCCGACATTTTATCTTGGATGAGTGTGACAAGATGCTTGAGTCCCTTGATATGCGGAGAGACGTACAGGAAATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTCTCTGCAACACTCAGCAAAGAAATCCGCCCAGTTTGCAAGAAGTTTATGCAAGATCCAATGGAAATATATGTAGATGACGAGGCAAAGCTGACCTTGCATGGTCTTGTCCAGCATTACATCAAATTGAGCGAGATGGAGAAAAATCGGAAGCTGAATGATCTCCTTGATGCTTTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAGTAGAGCAGCTGAGCTGGATAAGTTGTTGGTGGAGTGTAATTTTCCCTCTATATGCATCCACTCTGGCATGTCTCAAGAAGAGAGGTTGACTCGATACAAGGGCTTTAAAGAAGGACATAAGCGGATTCTTGTGGCAACAGATTTGGTTGGTCGAGGAATTGACATTGAACGTGTAAACATTGTCATCAATTATGACATGCCAGATTCTGCTGATACTTATTTGCACAGGGTCGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACCTTTGTATCATCTGCAGCTGATTCTGATGTTCTCAATAATGTTCAAGAAAGGTTCGAAGTCGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACATACAGTATTGCCATCATAGACGTAGAGATCATCAGCATAGAAATCGGCTACCTGGGTTGGTGAGGGTGGTTCACATATCATTGTGGTTTGATTTTGATTCGGACTAAAAATGGATGGAAGCCACTGCACTCACTAGCTTTGATGTGAACGAGGGCAATGGTGGATGCGCCAAATGTGGGTGGTGGGGTGGGTGTATACGCTGCCATTTGAGTTTATTGTATTCTAATTGCTGGGGCTGTCTTGCATGGAAGAAGTCTCTATATGCGTTTTATCCTGAATCGCGAATGATACAACAAATGTATTACTTTAGATATTCCTCTCTGCAAGACTAACAATAACGGTAGACTGGTTGGTTGGTAGTATTTGCAGTGATTTTATCGGATTCCTTATGTGAACCCATTTCCCCAAGTTCCATGGCTTCACCTGGTTCTCTCGTTACTGCCTATTGCTGATGTTTTGATGCGAATTTTACTGGAGATTTAGCTTGCAAATCAACATACCAAGTTTTGTGAATGAGATGTTCATAAATTAGATGCCTGAAATCGATTTCGTATTCTGTTTTAGCCATTCTTGTGATTCTAGAAGTGTTAGC

Coding sequence (CDS)

ATGATCCTTGCAGATTGCAGGAGAGTGGGAGCATTTGAGTTCGCAAATGTAAGATCCGAAGGGGAATGTATAAGCTTGTGGTACACTTGGGTAGCTTCTGGAGTCTTAACATTTTCTCTCCAGCTAACTTACTTTTCCTTTGCAGACTTCGTGAAATCGCAACCAAACTCTTTAAGTCGAGTTCATAGCAGGCTACCAGAAATGGGAGAAACAAGAGAGAACGAATATGAGGAAGAGCTCCTCGACTACGAGGAAGAGGAAGAGAAGGCCCCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGGGTTATGTTGGAATTCATAGTTCGGGATTCAGAGACTTCCTATTGAAGCCAGAGCTTCTCCGTGCTATTGTAGACTCTGGGTTTGAGCATCCATCTGAAGTGCAACACGAATGTATTCCCCAAGCTATTCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGCAAAACTGCTGTTTTTGTTCTGTCAACGCTGCAGCAGATTGACCCTGTTGCTGGTCAAGTCTCTGCACTAGTTCTGTGCCATACGAGGGAGCTTGCATACCAGATCTGTCACGAATTTGAGAGGTTCAGCACTTATCTTCCTGATCTGAAGGTTGCTGTCTTCTATGGTGGGGTGAATATTAAAATTCACAAAGATCTTCTGAAAAATGAATGTCCTCATATTGTTGTTGGAACACCTGGAAGGATACTGGCATTGTCAAGAGACAAGGACCTATCTCTGAAGAACGTCCGACATTTTATCTTGGATGAGTGTGACAAGATGCTTGAGTCCCTTGATATGCGGAGAGACGTACAGGAAATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTCTCTGCAACACTCAGCAAAGAAATCCGCCCAGTTTGCAAGAAGTTTATGCAAGATCCAATGGAAATATATGTAGATGACGAGGCAAAGCTGACCTTGCATGGTCTTGTCCAGCATTACATCAAATTGAGCGAGATGGAGAAAAATCGGAAGCTGAATGATCTCCTTGATGCTTTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAGTAGAGCAGCTGAGCTGGATAAGTTGTTGGTGGAGTGTAATTTTCCCTCTATATGCATCCACTCTGGCATGTCTCAAGAAGAGAGGTTGACTCGATACAAGGGCTTTAAAGAAGGACATAAGCGGATTCTTGTGGCAACAGATTTGGTTGGTCGAGGAATTGACATTGAACGTGTAAACATTGTCATCAATTATGACATGCCAGATTCTGCTGATACTTATTTGCACAGGGTCGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACCTTTGTATCATCTGCAGCTGATTCTGATGTTCTCAATAATGTTCAAGAAAGGTTCGAAGTCGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACATACAGTATTGCCATCATAGACGTAGAGATCATCAGCATAGAAATCGGCTACCTGGGTTGGTGA

Protein sequence

MILADCRRVGAFEFANVRSEGECISLWYTWVASGVLTFSLQLTYFSFADFVKSQPNSLSRVHSRLPEMGETRENEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTYSIAIIDVEIISIEIGYLGW

Homology

[Close]

BLAST of CmaCh05G003860 vs. Swiss-Prot
Match: RH56_ARATH (DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana GN=RH56 PE=1 SV=2)

HSP 1 Score: 793.9 bits (2049), Expect = 1.0e-228
Identity = 400/425 (94.12%), Postives = 413/425 (97.18%), Query Frame = 1


Query: 68  MGETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 127
           MG+ R+NE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 128 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 187
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 188 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 247
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 248 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 307
           L+R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 308 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 367
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 368 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 427
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 428 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 487
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 488 DTSTY 492
           DTSTY
Sbjct: 421 DTSTY 424

[Close]

BLAST of CmaCh05G003860 vs. Swiss-Prot
Match: RH15_ARATH (DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana GN=RH15 PE=1 SV=3)

HSP 1 Score: 793.9 bits (2049), Expect = 1.0e-228
Identity = 400/425 (94.12%), Postives = 413/425 (97.18%), Query Frame = 1


Query: 68  MGETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 127
           MG+ R+NE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 128 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 187
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 188 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 247
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 248 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 307
           L+R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 308 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 367
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 368 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 427
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 428 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 487
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 488 DTSTY 492
           DTSTY
Sbjct: 421 DTSTY 424

[Close]

BLAST of CmaCh05G003860 vs. Swiss-Prot
Match: RH15_ORYSJ (DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica GN=AIP2 PE=1 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 2.4e-217
Identity = 382/425 (89.88%), Postives = 399/425 (93.88%), Query Frame = 1


Query: 70  ETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAG--KKGYVGIHSSGFRDFLLKPELLR 129
           E ++NE YEE+L+DYEEE E   D   A  N  A   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGADGGAAAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 130 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 189
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQIDPVAGQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 190 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 249
           LCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CPHIVVGTPGRILA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 250 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 309
           L+R+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 185 LAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 244

Query: 310 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 369
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 245 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 304

Query: 370 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 429
           RAAEL+KLL ECNFP+I IHSGM+QEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 305 RAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 364

Query: 430 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 489
           VINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 365 VINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 424

Query: 490 DTSTY 492
           DTSTY
Sbjct: 425 DTSTY 429

[Close]

BLAST of CmaCh05G003860 vs. Swiss-Prot
Match: RH56_ORYSJ (DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica GN=AIP1 PE=1 SV=2)

HSP 1 Score: 753.8 bits (1945), Expect = 1.2e-216
Identity = 381/425 (89.65%), Postives = 398/425 (93.65%), Query Frame = 1


Query: 70  ETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAG--KKGYVGIHSSGFRDFLLKPELLR 129
           E ++NE YEE+L+DYEEE E   D      N  A   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGTDGGANAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 130 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 189
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQIDPVAGQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 190 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 249
           LCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CPHIVVGTPGRILA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 250 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 309
           L+R+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 185 LAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 244

Query: 310 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 369
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 245 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 304

Query: 370 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 429
           RAAEL+KLL ECNFP+I IHSGM+QEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 305 RAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 364

Query: 430 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 489
           VINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 365 VINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 424

Query: 490 DTSTY 492
           DTSTY
Sbjct: 425 DTSTY 429

[Close]

BLAST of CmaCh05G003860 vs. Swiss-Prot
Match: DX39B_CANLF (Spliceosome RNA helicase DDX39B OS=Canis lupus familiaris GN=DDX39B PE=3 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 3.8e-178
Identity = 310/421 (73.63%), Postives = 364/421 (86.46%), Query Frame = 1


Query: 73  ENEYEEELLDYEEEE-EKAPDSVGAKVNGEAGKKG-YVGIHSSGFRDFLLKPELLRAIVD 132
           EN+ + ELLDYEE+E E A    G++   +   KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3   ENDVDNELLDYEEDEVETAAGGDGSEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62

Query: 133 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHT 192
            GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ++PV GQVS LV+CHT
Sbjct: 63  CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHT 122

Query: 193 RELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALSRD 252
           RELA+QI  E+ERFS Y+P++KVAVF+GG++IK  +++LK  CPHIVVGTPGRILAL+R+
Sbjct: 123 RELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN 182

Query: 253 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 312
           K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKF 242

Query: 313 MQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 372
           MQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R   
Sbjct: 243 MQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIA 302

Query: 373 LDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINY 432
           L +LLVE NFP+I IH GM QEERL+RY+ FK+  +RILVAT+L GRG+DIERVNI  NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362

Query: 433 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTST 492
           DMP+ +DTYLHRV RAGRFGTKGLAITFVS   D+ +LN+VQ+RFEV+I ELP++ID S+
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISS 422

[Close]

BLAST of CmaCh05G003860 vs. TrEMBL
Match: A0A0A0LSH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381720 PE=4 SV=1)

HSP 1 Score: 842.8 bits (2176), Expect = 2.2e-241
Identity = 422/424 (99.53%), Postives = 424/424 (100.00%), Query Frame = 1


Query: 68  MGETRENEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 127
           MGETR+NEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 128 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 187
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 188 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 247
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 248 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 307
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 308 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 367
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300

Query: 368 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 427
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 428 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 487
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 488 TSTY 492
           TSTY
Sbjct: 421 TSTY 424

[Close]

BLAST of CmaCh05G003860 vs. TrEMBL
Match: A0A0D2TEF2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G057600 PE=4 SV=1)

HSP 1 Score: 816.6 bits (2108), Expect = 1.7e-233
Identity = 409/425 (96.24%), Postives = 418/425 (98.35%), Query Frame = 1


Query: 68  MGETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 127
           MGETR+N+ YEEELLDYEEEEEKAPDSV AKVNGE GKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGEGGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 128 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 187
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQV ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVIALV 120

Query: 188 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 247
           LCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIK+HKDLLKNECPHIVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILA 180

Query: 248 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 307
           L+RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 308 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 367
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVN 300

Query: 368 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 427
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 428 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 487
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 488 DTSTY 492
           DTSTY
Sbjct: 421 DTSTY 425

[Close]

BLAST of CmaCh05G003860 vs. TrEMBL
Match: A0A0D2S7W5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G292500 PE=4 SV=1)

HSP 1 Score: 816.2 bits (2107), Expect = 2.2e-233
Identity = 407/425 (95.76%), Postives = 419/425 (98.59%), Query Frame = 1


Query: 68  MGETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 127
           MGETR+N+ YEEELLDYEEEEEKAPDSV AKVNG+AGKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGDAGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 128 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 187
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQV ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTPGQVVALV 120

Query: 188 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 247
           LCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIK+HKDLLKNECPH+VVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHVVVGTPGRILA 180

Query: 248 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 307
           L+RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 308 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 367
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 368 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 427
           RAAEL+KLL+ECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLMECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 428 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 487
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 488 DTSTY 492
           DTSTY
Sbjct: 421 DTSTY 425

[Close]

BLAST of CmaCh05G003860 vs. TrEMBL
Match: A0A0D2UCK5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G114300 PE=4 SV=1)

HSP 1 Score: 815.8 bits (2106), Expect = 2.9e-233
Identity = 407/425 (95.76%), Postives = 419/425 (98.59%), Query Frame = 1


Query: 68  MGETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 127
           MGETR+N+ YEEELLDYEEEEEKAPDSV AKVNGEAGKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 128 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 187
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQI+P  GQV ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIEPTPGQVIALV 120

Query: 188 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 247
           LCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVN+K+HKDLLKNECPHIVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNVKVHKDLLKNECPHIVVGTPGRILA 180

Query: 248 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 307
           L+RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 308 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 367
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVN 300

Query: 368 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 427
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 428 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 487
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 488 DTSTY 492
           DTSTY
Sbjct: 421 DTSTY 425

[Close]

BLAST of CmaCh05G003860 vs. TrEMBL
Match: F6H316_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05330 PE=4 SV=1)

HSP 1 Score: 814.3 bits (2102), Expect = 8.3e-233
Identity = 407/425 (95.76%), Postives = 418/425 (98.35%), Query Frame = 1


Query: 68  MGETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 127
           MGETR+N+ YEEELLDYEEEE+KAPDSV  KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEDKAPDSVTGKVNGEAAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 128 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 187
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+PV GQV+ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVTGQVAALV 120

Query: 188 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 247
           LCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180

Query: 248 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 307
           L+RDKDL+LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLALKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 308 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 367
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 368 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 427
           RAAEL+KLLVECNFPSICIHSGM QEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMPQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 428 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 487
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 488 DTSTY 492
           DTSTY
Sbjct: 421 DTSTY 425

[Close]

BLAST of CmaCh05G003860 vs. TAIR10
Match: AT5G11170.1 (AT5G11170.1 DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 793.9 bits (2049), Expect = 5.9e-230
Identity = 400/425 (94.12%), Postives = 413/425 (97.18%), Query Frame = 1


Query: 68  MGETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 127
           MG+ R+NE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 128 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 187
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 188 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 247
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 248 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 307
           L+R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 308 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 367
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 368 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 427
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 428 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 487
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 488 DTSTY 492
           DTSTY
Sbjct: 421 DTSTY 424

[Close]

BLAST of CmaCh05G003860 vs. TAIR10
Match: AT5G11200.2 (AT5G11200.2 DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 644.8 bits (1662), Expect = 4.4e-185
Identity = 353/484 (72.93%), Postives = 381/484 (78.72%), Query Frame = 1


Query: 68  MGETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 127
           MG+ R+NE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 128 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 187
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 188 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 247
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 248 LSR-----------------DKDLSLKNVRH-----FILDECDK--MLESLDMRRDVQEI 307
           L+R                 DK L   ++R      F +   DK  M+ S  + ++++ +
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 308 FKMTPHD------KQVMMFSATLSKEIRPVC----------------------------K 367
            K    D        V +FS  +      +C                            K
Sbjct: 241 CKKFMQDFLENETVSVRLFSFGVENSEWRLCSFGFIVLVWVSMFRAILMFHSKTHIFEEK 300

Query: 368 KFMQ-DPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 427
           ++ +  PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 301 RWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 360

Query: 428 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 487
           AAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 361 AAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIV 420

Query: 488 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 492
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQID
Sbjct: 421 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQID 480

[Close]

BLAST of CmaCh05G003860 vs. TAIR10
Match: AT3G61240.1 (AT3G61240.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 260.0 bits (663), Expect = 3.1e-69
Identity = 145/378 (38.36%), Postives = 223/378 (58.99%), Query Frame = 1


Query: 115 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 174
           F D+ LK +LL+ I + GFE PS +Q E IP A+ G D++ +AK+G GKT  F +  L++
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185

Query: 175 IDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECP 234
           IDP    + A++L  TRELA Q     +  S YL +++V V  GG +++   D+++   P
Sbjct: 186 IDPNNNVIQAMILVPTRELALQTSQVCKELSKYL-NIQVMVTTGGTSLR--DDIMRLHQP 245

Query: 235 -HIVVGTPGRILALSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 294
            H++VGTPGRIL L++     LK+    ++DE DK+L S + +  ++E+ +  P ++Q +
Sbjct: 246 VHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLL-SAEFQPSLEELIQFLPQNRQFL 305

Query: 295 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDAL 354
           MFSAT    ++    + ++ P  I + D+  LTL G+ Q+Y  + E +K   LN L   L
Sbjct: 306 MFSATFPVTVKAFKDRHLRKPYVINLMDQ--LTLMGVTQYYAFVEERQKVHCLNTLFSKL 365

Query: 355 DFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATD 414
             NQ +IF  SV+R   L K + E  +    IH+ M Q+ R   +  F+ G  R LV TD
Sbjct: 366 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTD 425

Query: 415 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQE 474
           L  RGIDI+ VN+VIN+D P ++++YLHRVGR+GRFG  GLA+  V +  D   +   ++
Sbjct: 426 LFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLV-TYEDRFKMYQTEQ 485

Query: 475 RFEVDIKELPEQIDTSTY 492
               +IK +P  ID + Y
Sbjct: 486 ELGTEIKPIPSNIDQAIY 496

[Close]

BLAST of CmaCh05G003860 vs. TAIR10
Match: AT2G45810.1 (AT2G45810.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 259.2 bits (661), Expect = 5.2e-69
Identity = 154/423 (36.41%), Postives = 239/423 (56.50%), Query Frame = 1


Query: 70  ETRENEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRAIV 129
           E  +    E + D   E+ KA   +  + N     +       + F D+ LK +LLR I 
Sbjct: 112 EVEKTVQSEAISDSNNEDWKATLKLPPRDN-RYQTEDVTATKGNEFEDYFLKRDLLRGIY 171

Query: 130 DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCH 189
           + GFE PS +Q E IP A+ G D++ +AK+G GKT  F + TL++IDP    + A++L  
Sbjct: 172 EKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVP 231

Query: 190 TRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECP-HIVVGTPGRILALS 249
           TRELA Q     +  S YL  ++V V  GG +++   D+++   P H++VGTPGRIL L+
Sbjct: 232 TRELALQTSQVCKELSKYLK-IEVMVTTGGTSLR--DDIMRLYQPVHLLVGTPGRILDLA 291

Query: 250 RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCK 309
           +     LK+    ++DE DK+L S++ +  ++E+ +  P  +Q++MFSAT    ++    
Sbjct: 292 KKGVCVLKDCAMLVMDEADKLL-SVEFQPSIEELIQFLPESRQILMFSATFPVTVKSFKD 351

Query: 310 KFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRA 369
           ++++ P  I + D+  LTL G+ Q+Y  + E +K   LN L   L  NQ +IF  SV+R 
Sbjct: 352 RYLKKPYIINLMDQ--LTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRV 411

Query: 370 AELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVI 429
             L K + E  +    IH+ M Q+ R   +  F+ G  R LV TDL  RGIDI+ VN+VI
Sbjct: 412 ELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVI 471

Query: 430 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDT 489
           N+D P ++++YLHRVGR+GRFG  GLA+  V +  D   +   ++    +IK +P  ID 
Sbjct: 472 NFDFPRTSESYLHRVGRSGRFGHLGLAVNLV-TYEDRFKMYQTEQELGTEIKPIPSLIDK 526

Query: 490 STY 492
           + Y
Sbjct: 532 AIY 526

[Close]

BLAST of CmaCh05G003860 vs. TAIR10
Match: AT4G00660.2 (AT4G00660.2 RNAhelicase-like 8)

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-68
Identity = 155/420 (36.90%), Postives = 235/420 (55.95%), Query Frame = 1


Query: 73  ENEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRAIVDSG 132
           E   + E++D   E+ KA   + A  +     +       + F D+ LK ELL  I + G
Sbjct: 92  EKTVQSEVIDPNSEDWKARLKLPAP-DTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKG 151

Query: 133 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRE 192
           FE PS +Q E IP A+ G D++ +AK+G GKTA F +  L++ID     + A+++  TRE
Sbjct: 152 FERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRE 211

Query: 193 LAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECP-HIVVGTPGRILALSRDK 252
           LA Q     +    +L  ++V V  GG ++K   D+++   P H++VGTPGRIL L++  
Sbjct: 212 LALQTSQVCKELGKHLK-IQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLTKKG 271

Query: 253 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 312
              LK+    ++DE DK+L S + +  V+ +    P  +Q++MFSAT    ++    +F+
Sbjct: 272 VCVLKDCSVLVMDEADKLL-SQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFL 331

Query: 313 QDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 372
            +P  I + DE  LTL G+ Q Y  + E +K   LN L   L  NQ +IF  SV+R   L
Sbjct: 332 TNPYVINLMDE--LTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELL 391

Query: 373 DKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYD 432
            K + E  +    IH+ M Q+ R   +  F+ G  R LV TDL  RGIDI+ VN+VIN+D
Sbjct: 392 AKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFD 451

Query: 433 MPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTY 492
            P +A+TYLHRVGR+GRFG  GLA+  + +  D   L  +++    +IK++P  ID + Y
Sbjct: 452 FPKNAETYLHRVGRSGRFGHLGLAVNLI-TYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 503

[Close]

BLAST of CmaCh05G003860 vs. NCBI nr
Match: gi|659088870|ref|XP_008445205.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis melo])

HSP 1 Score: 842.8 bits (2176), Expect = 3.1e-241
Identity = 422/424 (99.53%), Postives = 424/424 (100.00%), Query Frame = 1


Query: 68  MGETRENEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 127
           MGETR+NEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 128 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 187
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 188 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 247
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 248 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 307
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 308 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 367
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300

Query: 368 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 427
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 428 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 487
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 488 TSTY 492
           TSTY
Sbjct: 421 TSTY 424

[Close]

BLAST of CmaCh05G003860 vs. NCBI nr
Match: gi|823225116|ref|XP_012445349.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 816.6 bits (2108), Expect = 2.4e-233
Identity = 409/425 (96.24%), Postives = 418/425 (98.35%), Query Frame = 1


Query: 68  MGETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 127
           MGETR+N+ YEEELLDYEEEEEKAPDSV AKVNGE GKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGEGGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 128 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 187
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQV ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVIALV 120

Query: 188 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 247
           LCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIK+HKDLLKNECPHIVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILA 180

Query: 248 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 307
           L+RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 308 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 367
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVN 300

Query: 368 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 427
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 428 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 487
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 488 DTSTY 492
           DTSTY
Sbjct: 421 DTSTY 425

[Close]

BLAST of CmaCh05G003860 vs. NCBI nr
Match: gi|823154984|ref|XP_012477378.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 816.2 bits (2107), Expect = 3.1e-233
Identity = 407/425 (95.76%), Postives = 419/425 (98.59%), Query Frame = 1


Query: 68  MGETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 127
           MGETR+N+ YEEELLDYEEEEEKAPDSV AKVNG+AGKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGDAGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 128 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 187
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQV ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTPGQVVALV 120

Query: 188 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 247
           LCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIK+HKDLLKNECPH+VVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHVVVGTPGRILA 180

Query: 248 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 307
           L+RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 308 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 367
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 368 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 427
           RAAEL+KLL+ECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLMECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 428 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 487
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 488 DTSTY 492
           DTSTY
Sbjct: 421 DTSTY 425

[Close]

BLAST of CmaCh05G003860 vs. NCBI nr
Match: gi|823237042|ref|XP_012451180.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 815.8 bits (2106), Expect = 4.1e-233
Identity = 407/425 (95.76%), Postives = 419/425 (98.59%), Query Frame = 1


Query: 68  MGETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 127
           MGETR+N+ YEEELLDYEEEEEKAPDSV AKVNGEAGKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 128 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 187
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQI+P  GQV ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIEPTPGQVIALV 120

Query: 188 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 247
           LCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVN+K+HKDLLKNECPHIVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNVKVHKDLLKNECPHIVVGTPGRILA 180

Query: 248 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 307
           L+RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 308 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 367
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVN 300

Query: 368 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 427
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 428 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 487
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 488 DTSTY 492
           DTSTY
Sbjct: 421 DTSTY 425

[Close]

BLAST of CmaCh05G003860 vs. NCBI nr
Match: gi|720035424|ref|XP_010267037.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Nelumbo nucifera])

HSP 1 Score: 815.5 bits (2105), Expect = 5.4e-233
Identity = 408/425 (96.00%), Postives = 419/425 (98.59%), Query Frame = 1


Query: 68  MGETRENE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 127
           MGETRENE YEEELLDYEEEEEKAPDS+GAK  GE+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRENEAYEEELLDYEEEEEKAPDSIGAKGTGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 128 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 187
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+PVAGQV+ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 120

Query: 188 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 247
           LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHK++LKNECPHIVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKEMLKNECPHIVVGTPGRILA 180

Query: 248 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 307
           L+RDKDL+LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLALKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 308 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 367
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL+E EKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTESEKNRKLNDLLDALDFNQVVIFVKSVN 300

Query: 368 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 427
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 428 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 487
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNQVQERFEVDIKELPEQI 420

Query: 488 DTSTY 492
           DTSTY
Sbjct: 421 DTSTY 425

The following BLAST results are available for this feature:

BLAST of CmaCh05G003860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RH56_ARATH	1.0e-228	94.12	DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana GN=RH56 PE=1 SV=2	[more]
RH15_ARATH	1.0e-228	94.12	DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana GN=RH15 PE=1 SV=3	[more]
RH15_ORYSJ	2.4e-217	89.88	DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica GN=AIP2 P...	[more]
RH56_ORYSJ	1.2e-216	89.65	DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica GN=AIP1 P...	[more]
DX39B_CANLF	3.8e-178	73.63	Spliceosome RNA helicase DDX39B OS=Canis lupus familiaris GN=DDX39B PE=3 SV=1	[more]

BLAST of CmaCh05G003860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSH7_CUCSA	2.2e-241	99.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381720 PE=4 SV=1	[more]
A0A0D2TEF2_GOSRA	1.7e-233	96.24	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G057600 PE=4 SV=1	[more]
A0A0D2S7W5_GOSRA	2.2e-233	95.76	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G292500 PE=4 SV=1	[more]
A0A0D2UCK5_GOSRA	2.9e-233	95.76	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G114300 PE=4 SV=1	[more]
F6H316_VITVI	8.3e-233	95.76	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05330 PE=4 SV=...	[more]

BLAST of CmaCh05G003860 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11170.1	5.9e-230	94.12	DEAD/DEAH box RNA helicase family protein	[more]
AT5G11200.2	4.4e-185	72.93	DEAD/DEAH box RNA helicase family protein	[more]
AT3G61240.1	3.1e-69	38.36	DEA(D/H)-box RNA helicase family protein	[more]
AT2G45810.1	5.2e-69	36.41	DEA(D/H)-box RNA helicase family protein	[more]
AT4G00660.2	2.0e-68	36.90	RNAhelicase-like 8	[more]

BLAST of CmaCh05G003860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088870\|ref\|XP_008445205.1\|	3.1e-241	99.53	PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis melo]	[more]
gi\|823225116\|ref\|XP_012445349.1\|	2.4e-233	96.24	PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X1 [Gossypium rai...	[more]
gi\|823154984\|ref\|XP_012477378.1\|	3.1e-233	95.76	PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X1 [Gossypium rai...	[more]
gi\|823237042\|ref\|XP_012451180.1\|	4.1e-233	95.76	PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X1 [Gossypium rai...	[more]
gi\|720035424\|ref\|XP_010267037.1\|	5.4e-233	96.00	PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C
IPR011545	DEAD/DEAH_box_helicase_dom
IPR014001	Helicase_ATP-bd
IPR014014	RNA_helicase_DEAD_Q_motif
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G003860.1	CmaCh05G003860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 344..450 score: 3.7
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 369..450 score: 1.3
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 345..490 score: 22
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 138..303 score: 5.5
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 132..333 score: 1.8
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 144..317 score: 25
IPR014014	RNA helicase, DEAD-box type, Q motif	PROFILE	PS51195	Q_MOTIF	coord: 113..141 score: 9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 325..487 score: 1.9E-48coord: 104..323 score: 9.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 182..461 score: 2.81
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 13..491 score:
None	No IPR available	PANTHER	PTHR24031:SF246	DEAD-BOX ATP-DEPENDENT RNA HELICASE 15	coord: 13..491 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh05G003860	Cucsa.162420	Cucumber (Gy14) v1	cgycmaB0462
CmaCh05G003860	Cla022322	Watermelon (97103) v1	cmawmB753
CmaCh05G003860	Csa2G381720	Cucumber (Chinese Long) v2	cmacuB792
CmaCh05G003860	MELO3C011256	Melon (DHL92) v3.5.1	cmameB725
CmaCh05G003860	ClCG08G013310	Watermelon (Charleston Gray)	cmawcgB712
CmaCh05G003860	CSPI02G23480	Wild cucumber (PI 183967)	cmacpiB801
CmaCh05G003860	CmoCh05G003860	Cucurbita moschata (Rifu)	cmacmoB786
CmaCh05G003860	CmoCh12G002850	Cucurbita moschata (Rifu)	cmacmoB770
CmaCh05G003860	Lsi08G012010	Bottle gourd (USVL1VR-Ls)	cmalsiB739
CmaCh05G003860	Cp4.1LG11g03160	Cucurbita pepo (Zucchini)	cmacpeB766
CmaCh05G003860	Cp4.1LG07g02940	Cucurbita pepo (Zucchini)	cmacpeB797
CmaCh05G003860	MELO3C011256.2	Melon (DHL92) v3.6.1	cmamedB818
CmaCh05G003860	CsaV3_2G032030	Cucumber (Chinese Long) v3	cmacucB0935
CmaCh05G003860	Cla97C08G156690	Watermelon (97103) v2	cmawmbB832
CmaCh05G003860	Bhi04G000786	Wax gourd	cmawgoB0939
CmaCh05G003860	CsGy2G023240	Cucumber (Gy14) v2	cgybcmaB258
CmaCh05G003860	Carg03924	Silver-seed gourd	carcmaB1357
CmaCh05G003860	Carg09332	Silver-seed gourd	carcmaB0189

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh05G003860	CmaCh12G003360	Cucurbita maxima (Rimu)	cmacmaB199

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh05G003860	Melon (DHL92) v3.6.1	cmamedB828
CmaCh05G003860	Silver-seed gourd	carcmaB0901
CmaCh05G003860	Cucumber (Chinese Long) v3	cmacucB0940
CmaCh05G003860	Watermelon (97103) v2	cmawmbB818
CmaCh05G003860	Watermelon (97103) v2	cmawmbB829
CmaCh05G003860	Wax gourd	cmawgoB0964
CmaCh05G003860	Cucurbita maxima (Rimu)	cmacmaB066
CmaCh05G003860	Cucurbita maxima (Rimu)	cmacmaB434
CmaCh05G003860	Cucumber (Gy14) v1	cgycmaB0874
CmaCh05G003860	Cucurbita moschata (Rifu)	cmacmoB754
CmaCh05G003860	Cucurbita moschata (Rifu)	cmacmoB783
CmaCh05G003860	Wild cucumber (PI 183967)	cmacpiB806
CmaCh05G003860	Cucumber (Chinese Long) v2	cmacuB797
CmaCh05G003860	Melon (DHL92) v3.5.1	cmameB733
CmaCh05G003860	Watermelon (Charleston Gray)	cmawcgB700
CmaCh05G003860	Watermelon (97103) v1	cmawmB756
CmaCh05G003860	Cucurbita pepo (Zucchini)	cmacpeB785
CmaCh05G003860	Cucurbita pepo (Zucchini)	cmacpeB778
CmaCh05G003860	Bottle gourd (USVL1VR-Ls)	cmalsiB727
CmaCh05G003860	Cucumber (Gy14) v2	cgybcmaB422