Carg03924 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03924
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ATP-dependent RNA helicase
Location	Cucurbita_argyrosperma_scaffold_011 : 817248 .. 822202 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTACTCTCTTCGCTCTTCCTCCACACTGCGCTCTGCGATTCCTCGAGAGGCAGGTCTTAACACTTTTAGTTTTCCTTTGCAGACTTTGTGAAATCGCAACCCTAACTCTTAAGTTGAGTTCTTAGCAGGCTAACAGGTAATTTCAATCTTTGTGTTAGAAAGCACTAATCTCTCGTTCTTACTGTTTTAAACCCTAGTTTCATTGTTGGGTTGGATTTGGTTTTTCGTGAACTTGGAATGAAATTGAATTCGTTCTCTGGTTTTATGTTTAGGAAGAAATGGGAGAAACAAGAGACAACGAATATGAGGAAGAGCTCCTCGACTATGAGGAAGAGGAAGAGAAGGCACCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGTGAGTAGTCTTCTTGAGCACCATTTCTAATCTTTTTATTTTTAGGCTTTTGCATATGGATTTGGAAATTATGGGTCGAATAGTTCCCTACGGTGTCTTGGATGCGTGTTTTGAGAAAATTTTAGATTTGGAAGTAATTCTGTTCGTCTGGTTTAGTTTGGAGTTAGAGCGGTTGGAATATGTAGTTGTTTGAGCTTGCAGTGAACTAAAAAACGATGATTTATTCTTCCTACTATGTCTTTCGTGCAGATTATGATTTTATATCGATGTGTTGGTTTTTTCCCCATGGAATGTCGCTCTTTTTGTTGTTGTTTATGTTATAGATCCTTACCTTCTTTCACTGTCTTCTTTCTCAGGGGTTATGTTGGAATTCACAGTTCGGGATTCAGAGACTTCCTATTGAAGCCGGAGCTTCTCCGTGCTATTGTGGACTCGGGATTTGAGCATCCATCTGAAGGCAAATTTCTATTTTTTTTTCTAATTTTCAATTGTTGAATCTTAAACCAAAGTGGAAGTGAATACAATTAAAATTGGGACAATTACTCTTAAATTTTCTATAAACTTGATCTTTTTGACCTACGATACAGTAGTTCACTTATTTCTCTGTGTTCACTACCTTAAAATTTTGTTGCCTTGAGAACACTTGTACTTCTCAACCTAAGGGGCTATTTAATGTCAGTCTAACTAAACACAATTTCCAATAATTTATCATCCAAACACTGCTTAAAGTATGCTATTGTGTTTCAAATAGTGAGAAATATCTTGACACCTTTTTTGGACAGTATAATTCATGGATGAGAACACACTTGCACATCAATTTGGAAACAATGTCTTTTTAGAATATGCTATTTCCACTTGTTCTCATCACACACACAAAATAAAAGTTACCCCTCAATTGCTTTTTGTTACCAGCCCATCTTAGATGTTTTTATCTGTTGTTTTATGTTTTGCAGGTAATAAATTAATATCATAATCTTGATTTCGGAGCAATATATATGGTTTGATAAAGCTTTCACATAAAGGATCGGAGACGTTATAATTTACTTACCAAGAGTTCATTTGGTTCGATCCTTTTCTTTGGTTCTTCATCAGTGCAACACGAATGTATTCCCCAAGCTATCCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGTAAAACTGCTGTTTTTGTTCTGTCAACATTGCAGCAGATTGACCCTGTTGCTGGTCAAGTTTCTGCCCTAGTTCTGTGCCATACTAGGGAGCTTGCATACCAGGTGCGTTAGTGTGCTGCTTATCTTTTTAAATATGACTGCTCTTGAAGCACGTATAGAACTATTTCTTTGCATTATATGTATGCCTAGCTCCTAACATTCTTTTATACCTTTTTAGATCTGTCATGAGTTCGAAAGGTTCAGCACTTATCTTCCCGATCTGAAAGTTGCAGTCTTCTATGGTGGGGTGAATATTAAAATTCACAAAGATCTTCTGAAGAACGAATGCCCTCATATTGTTGTTGGAACACCCGGAAGGATATTGGCATTGACAAGAGACAAGGACCTTTCCCTGAAGAATGTGCGGCATTTTATCTTGGATGAATGTGACAAGATGCTTGAGTCACTTGGTATATTTTCTTTGAAAATCATTTGTCCTTCGAAGTATTATTAGATTCTCCACCATATATTATGTTCTTCGAAGTTTCATATTTGTTTTCCATTGGGTCCTTTTAGTTGTCTCATGGGCTATGTTTTAATATATGTATTATTTGGCATTGGCATATCTTCTTACTATGCCCTCTTCATGTACACTGCAGATATGCGGAGGGATGTACAGGAAATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTTTCGGCGACACTCAGCAAAGAAATCCGCCCAGTTTGCAAGAAGTTTATGCAAGATGTAATGTCCCACAGCTAGTAAACCTTCAATTTAGAAGTTTTTTCCCTTTAAATTTCACTTTTTCTTAAGAGTTTTGCAAATTGTGGTGTCTACTGTTGGGTTTCCTACTTGTCGTTCAGGAGGGATCTCTTTTTTGTGTACTATCTTTTATCTTCCTTCACCTACAGCCTTTTCGGGAATTTACTGGTATATTGGAGGAGTATGTTGGTGATACAGTTTTAGAGGTTCTGAAGTAGTAGTTGGTGTTAAAGTCACTCACTTCTTCCCTTTTCCTCTCCCATTGTGTGTCACTTGTTTTTCTCTTAGTGGGTTCTGGTTCTAACTTCCAACTGTGTGCTCTGGGGTATCCCATCAGATTTTTTTTGTACTAGTGTAATAGTCTGCATCTGCGGTATTTCTTGGTGACCATAGAAGTATCTGCAAAGGGGAGGCAGATCAGTTGGACCACAATCTTGGTTCATGGGATGAACATGCTCTTTCATTTCCTTCATCTTGAGGAAGTATTATGATTTACTGTGACGTTTGTTCCTTTCAGCCAATGGAAATATATGTTGATGACGAGGCAAAGTTGACATTGCATGGTCTTGTCCAGGTACACAGTTGTTAACATTGTGTTACTGTGGATAGATTGAGGTTTTTTTTTTCCTTAAAGTTTGTTTTTGGAATGTCAGCACTACATCAAACTGAGCGAGATGGAGAAAAATCGGAAGTTGAACGACCTCCTTGATGCATTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAGTAGGGCAGCTGAGCTGGATAAGTTATTGGTGGAGTGTAATTTTCCATCTATATGTATCCATTCTGGCATGTCTCAGGAAGAGAGGTAGGTCTGATGTTGTATTACACATTCAAACTTTCCATACTCAATTGTGCCCAAGTGTATTCATTTTCCTTATTAATGTTGCTGCTTATGGGCATTCTAGACTTCGACCTTCTTTTTGGTTAGTTATGGTATAGTGACTTCAGTATCTTCCTTTCTCTAGATGTATAACTATTTTCCTGCATTAACGTTATTTGGTAGGAAGTTGCAAAATTGCCCATTTACTTTTAAAGGTGATTGATTTTTCTTGAGATCAATATAACTAATATGGAAAGATGATGTGCCAGGTTGACTCGATACAAGGGTTTCAAGGAAGGACATAAGCGGATTCTTGTGGCAACAGATTTGGTTGGTCGAGGAATTGACATTGAACGCGTAAACATTGTCATCAACTATGACATGCCAGATTCTGCTGATACTTACCTGCACAGGGTAACGTGGATCATTCCTATGTATTTCGATTCTCATTATACCATCTACATTGGGCTTCCCAAGTGTGTATATTTAGTCTTCCTTCAAAAATCTTACAGGTTGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACTTTTGTATCATCTGCAGCTGATTCTGATGTTCTCAACAATGTATGTAACTTTTAATTATTACTTACTGTGACCATTAGATGGCATTTTCTTAGTCTTCGGCATTGCAGGTTCAAGAAAGGTTCGAAGTAGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACATACAGTATGTTCTCTTGTTTCCTCTTTTTTGTGTGATTATTTTCCTTTCTGAACTCCATTTTCCTTTGTAGTTTACCCTTCAGCCTGATTATCATTTATATTTCCCTTCTTTACCATCTGTTTAAACTGAATTCTTACTAGCCGTTGTGGTAAATTTTTGCTCATTTAGTGATGGTTGAAAGAAACATGTTAATTTTGCTATCCGAGTTTTTAAGGATGTGGTGGAGGTGTATTTATTTATCCTCTGCTTATGAGTAGTAGTGCCAATATTTTACTTTGGTTGGTTGCAGTGCCATCATAGATGTAGAGATCTTCAGCATAGAATATCAGCTACCTGGGTTGCCTTTGTGGTTCACATGTCATTGTGGTTCGAATCCAAATCGGACTCGAAATGGATGGAAGCCACTGGCACTAGGCTTGGGTGCGAGAGGGTAATGTGCTCTTGATGTGGTGGTGGTGGTGGTACACGCTGCTGCCATTTGAGTTTATTGTATTCTAATTGCTGGGGCTGTCTTGCATGGGAAGTCTCTTTATGAATTTTATTCCGAACCACGAATGATCGAAATGTAATATTTTAGATACCCCTTTCTCTCCCTGCAAGACAGAACAATTACGGTAGACTGTTGTTGGTAGTGTTTGCAGTGATTTTTATGAGACTCCTTATGCACTCTTTTGTTAGTGCCTATTGCCAGATGTTTAGATGTCCATTTTTCTAGAGCTTTTAGTACTACACGGAAATGAAGTTATCAATTGTTTCTTATTACGATGTTTGTTTGGTTCGTTCTCGAGGAATCCCGTCTTTTGAATGGTGTTCGAGTCTATTCTCGTATTATTAGATGTTTATTTCTCTTGCAGGGCTTGCTCTTGAAAAGAGGTAAGAAAGAAGATGAAGGGTGTAAGTTGGTTTTGAGATTGCTTTTTTACCATGGTCAATCTTTTTTTTTTTTTTTTTTTTTAACTGTTTTACTTATTTGGTAAAATTTATACTCTACCCTTTACATGTTTATATTTCACATTTAGCAATTTAAAATAATTTATAATAGACT

mRNA sequence

TAATTACTCTCTTCGCTCTTCCTCCACACTGCGCTCTGCGATTCCTCGAGAGGCAGGTCTTAACACTTTTAGTTTTCCTTTGCAGACTTTGTGAAATCGCAACCCTAACTCTTAAGTTGAGTTCTTAGCAGGCTAACAGGAAGAAATGGGAGAAACAAGAGACAACGAATATGAGGAAGAGCTCCTCGACTATGAGGAAGAGGAAGAGAAGGCACCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGGGTTATGTTGGAATTCACAGTTCGGGATTCAGAGACTTCCTATTGAAGCCGGAGCTTCTCCTGCAACACGAATGTATTCCCCAAGCTATCCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGTAAAACTGCTGTTTTTGTTCTGTCAACATTGCAGCAGATTGACCCTGTTGCTGGTCAAGTTTCTGCCCTAGTTCTGTGCCATACTAGGGAGCTTGCATACCAGATCTGTCATGAGTTCGAAAGGTTCAGCACTTATCTTCCCGATCTGAAAGTTGCAGTCTTCTATGGTGGGGTGAATATTAAAATTCACAAAGATCTTCTGAAGAACGAATGCCCTCATATTGTTGTTGGAACACCCGGAAGGATATTGGCATTGACAAGAGACAAGGACCTTTCCCTGAAGAATGTGCGGCATTTTATCTTGGATGAATGTGACAAGATGCTTGAGTCACTTGATATGCGGAGGGATGTACAGGAAATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTTTCGGCGACACTCAGCAAAGAAATCCGCCCAGTTTGCAAGAAGTTTATGCAAGATCCTTTTCGGGAATTTACTGGTATATTGGAGGAGTATGTTGGTGATACAGTTTTAGAGCCAATGGAAATATATGTTGATGACGAGGCAAAGTTGACATTGCATGGTCTTGTCCAGCACTACATCAAACTGAGCGAGATGGAGAAAAATCGGAAGTTGAACGACCTCCTTGATGCATTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAGTAGGGCAGCTGAGCTGGATAAGTTATTGGTGGAGTGTAATTTTCCATCTATATGTATCCATTCTGGCATGTCTCAGGAAGAGAGGTTGACTCGATACAAGGGTTTCAAGGAAGGACATAAGCGGATTCTTGTGGCAACAGATTTGGTTGGTCGAGGAATTGACATTGAACGCGTAAACATTGTCATCAACTATGACATGCCAGATTCTGCTGATACTTACCTGCACAGGGTTGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACTTTTGTATCATCTGCAGCTGATTCTGATGTTCTCAACAATGTTCAAGAAAGGTTCGAAGTAGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACATACAGTATTGCCATCATAGATGTAGAGATCTTCAGCATAGAATATCAGCTACCTGGGTTGCCTTTGTGGTTCACATGTCATTGTGGTTCGAATCCAAATCGGACTCGAAATGGATGGAAGCCACTGGCACTAGGCTTGGGTGCGAGAGGGTAATGTGCTCTTGATGTGGTGGTGGTGGTGGTACACGCTGCTGCCATTTGAGTTTATTGTATTCTAATTGCTGGGGCTGTCTTGCATGGGAAGTCTCTTTATGAATTTTATTCCGAACCACGAATGATCGAAATGTAATATTTTAGATACCCCTTTCTCTCCCTGCAAGACAGAACAATTACGGTAGACTGTTGTTGGTAGTGTTTGCAGTGATTTTTATGAGACTCCTTATGCACTCTTTTGTTAGTGCCTATTGCCAGATGTTTAGATGTCCATTTTTCTAGAGCTTTTAGTACTACACGGAAATGAAGTTATCAATTGTTTCTTATTACGATGTTTGTTTGGTTCGTTCTCGAGGAATCCCGTCTTTTGAATGGTGTTCGAGTCTATTCTCGTATTATTAGATGTTTATTTCTCTTGCAGGGCTTGCTCTTGAAAAGAGGTAAGAAAGAAGATGAAGGGTGTAAGTTGGTTTTGAGATTGCTTTTTTACCATGGTCAATCTTTTTTTTTTTTTTTTTTTTTAACTGTTTTACTTATTTGGTAAAATTTATACTCTACCCTTTACATGTTTATATTTCACATTTAGCAATTTAAAATAATTTATAATAGACT

Coding sequence (CDS)

ATGGGAGAAACAAGAGACAACGAATATGAGGAAGAGCTCCTCGACTATGAGGAAGAGGAAGAGAAGGCACCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGGGTTATGTTGGAATTCACAGTTCGGGATTCAGAGACTTCCTATTGAAGCCGGAGCTTCTCCTGCAACACGAATGTATTCCCCAAGCTATCCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGTAAAACTGCTGTTTTTGTTCTGTCAACATTGCAGCAGATTGACCCTGTTGCTGGTCAAGTTTCTGCCCTAGTTCTGTGCCATACTAGGGAGCTTGCATACCAGATCTGTCATGAGTTCGAAAGGTTCAGCACTTATCTTCCCGATCTGAAAGTTGCAGTCTTCTATGGTGGGGTGAATATTAAAATTCACAAAGATCTTCTGAAGAACGAATGCCCTCATATTGTTGTTGGAACACCCGGAAGGATATTGGCATTGACAAGAGACAAGGACCTTTCCCTGAAGAATGTGCGGCATTTTATCTTGGATGAATGTGACAAGATGCTTGAGTCACTTGATATGCGGAGGGATGTACAGGAAATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTTTCGGCGACACTCAGCAAAGAAATCCGCCCAGTTTGCAAGAAGTTTATGCAAGATCCTTTTCGGGAATTTACTGGTATATTGGAGGAGTATGTTGGTGATACAGTTTTAGAGCCAATGGAAATATATGTTGATGACGAGGCAAAGTTGACATTGCATGGTCTTGTCCAGCACTACATCAAACTGAGCGAGATGGAGAAAAATCGGAAGTTGAACGACCTCCTTGATGCATTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAGTAGGGCAGCTGAGCTGGATAAGTTATTGGTGGAGTGTAATTTTCCATCTATATGTATCCATTCTGGCATGTCTCAGGAAGAGAGGTTGACTCGATACAAGGGTTTCAAGGAAGGACATAAGCGGATTCTTGTGGCAACAGATTTGGTTGGTCGAGGAATTGACATTGAACGCGTAAACATTGTCATCAACTATGACATGCCAGATTCTGCTGATACTTACCTGCACAGGGTTGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACTTTTGTATCATCTGCAGCTGATTCTGATGTTCTCAACAATGTTCAAGAAAGGTTCGAAGTAGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACATACAGTATTGCCATCATAGATGTAGAGATCTTCAGCATAGAATATCAGCTACCTGGGTTGCCTTTGTGGTTCACATGTCATTGTGGTTCGAATCCAAATCGGACTCGAAATGGATGGAAGCCACTGGCACTAGGCTTGGGTGCGAGAGGGTAA

Protein sequence

MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLLQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTYSIAIIDVEIFSIEYQLPGLPLWFTCHCGSNPNRTRNGWKPLALGLGARG

Homology

[Close]

BLAST of Carg03924 vs. NCBI nr
Match: XP_022951402.1 (DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita moschata] >XP_022951403.1 DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita moschata] >XP_023002354.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita maxima] >XP_023002355.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita maxima] >XP_023537961.1 DEAD-box ATP-dependent RNA helicase 56-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 797.3 bits (2058), Expect = 2.8e-227
Identity = 410/443 (92.55%), Postives = 411/443 (92.78%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL-- 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL  
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  -----------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
                      +QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 300
           KKFMQD                   PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND
Sbjct: 241 KKFMQD-------------------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 300

Query: 301 LLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI 360
           LLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI
Sbjct: 301 LLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI 360

Query: 361 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL 420
           LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL
Sbjct: 361 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL 420

Query: 421 NNVQERFEVDIKELPEQIDTSTY 431
           NNVQERFEVDIKELPEQIDTSTY
Sbjct: 421 NNVQERFEVDIKELPEQIDTSTY 424

[Close]

BLAST of Carg03924 vs. NCBI nr
Match: XP_022961952.1 (DEAD-box ATP-dependent RNA helicase 56 [Cucurbita moschata] >XP_022961953.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita moschata] >XP_023545958.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita pepo subsp. pepo] >XP_023545959.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 795.8 bits (2054), Expect = 8.0e-227
Identity = 409/443 (92.33%), Postives = 411/443 (92.78%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL-- 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL  
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  -----------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
                      +QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           +RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 300
           KKFMQD                   PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND
Sbjct: 241 KKFMQD-------------------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 300

Query: 301 LLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI 360
           LLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI
Sbjct: 301 LLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI 360

Query: 361 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL 420
           LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL
Sbjct: 361 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL 420

Query: 421 NNVQERFEVDIKELPEQIDTSTY 431
           NNVQERFEVDIKELPEQIDTSTY
Sbjct: 421 NNVQERFEVDIKELPEQIDTSTY 424

[Close]

BLAST of Carg03924 vs. NCBI nr
Match: XP_008445205.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis melo] >XP_008445206.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis melo] >XP_004138728.2 PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis sativus] >XP_011649821.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis sativus] >XP_022131577.1 DEAD-box ATP-dependent RNA helicase 56 [Momordica charantia] >XP_022131578.1 DEAD-box ATP-dependent RNA helicase 56 [Momordica charantia] >KGN62946.1 hypothetical protein Csa_2G381720 [Cucumis sativus])

HSP 1 Score: 794.7 bits (2051), Expect = 1.8e-226
Identity = 408/443 (92.10%), Postives = 411/443 (92.78%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL-- 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL  
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  -----------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
                      +QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           +RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 300
           KKFMQD                   PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND
Sbjct: 241 KKFMQD-------------------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 300

Query: 301 LLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI 360
           LLDALDFNQVVIFVKSV+RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI
Sbjct: 301 LLDALDFNQVVIFVKSVNRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI 360

Query: 361 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL 420
           LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL
Sbjct: 361 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL 420

Query: 421 NNVQERFEVDIKELPEQIDTSTY 431
           NNVQERFEVDIKELPEQIDTSTY
Sbjct: 421 NNVQERFEVDIKELPEQIDTSTY 424

[Close]

BLAST of Carg03924 vs. NCBI nr
Match: XP_022996719.1 (DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita maxima] >XP_022996720.1 DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita maxima])

HSP 1 Score: 794.3 bits (2050), Expect = 2.3e-226
Identity = 408/443 (92.10%), Postives = 411/443 (92.78%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL-- 60
           MGETR+NEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL  
Sbjct: 1   MGETRENEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  -----------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
                      +QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           +RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 300
           KKFMQD                   PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND
Sbjct: 241 KKFMQD-------------------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 300

Query: 301 LLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI 360
           LLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI
Sbjct: 301 LLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI 360

Query: 361 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL 420
           LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL
Sbjct: 361 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL 420

Query: 421 NNVQERFEVDIKELPEQIDTSTY 431
           NNVQERFEVDIKELPEQIDTSTY
Sbjct: 421 NNVQERFEVDIKELPEQIDTSTY 424

[Close]

BLAST of Carg03924 vs. NCBI nr
Match: PPD78093.1 (hypothetical protein GOBAR_DD24979 [Gossypium barbadense])

HSP 1 Score: 774.6 bits (1999), Expect = 1.9e-220
Identity = 403/464 (86.85%), Postives = 420/464 (90.52%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL- 60
           MGETRDN+ YEEELLDYEEEEEKAPDSV AKVNG+AGKKGYVGIHSSGFRDFLLKPELL 
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGDAGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  -------------------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVA 120
                               QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  
Sbjct: 61  AIVDSGFEHPSEGKFILSFFQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTP 120

Query: 121 GQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVG 180
           GQV ALVLCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIK+HKDLLKNECPH+VVG
Sbjct: 121 GQVVALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHVVVG 180

Query: 181 TPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 240
           TPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL
Sbjct: 181 TPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 240

Query: 241 SKEIRPVCKKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEM 300
           SKEIRPVCKKFMQD    F G  + Y+    LEPMEIYVDDEAKLTLHGLVQHYIKLSE+
Sbjct: 241 SKEIRPVCKKFMQDVM--FRG--QYYLN---LEPMEIYVDDEAKLTLHGLVQHYIKLSEL 300

Query: 301 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKG 360
           EKNRKLNDLLDALDFNQVVIFVKSVSRAAEL+KLL+ECNFPSICIHSGMSQEERLTRYKG
Sbjct: 301 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLMECNFPSICIHSGMSQEERLTRYKG 360

Query: 361 FKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 420
           FKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS
Sbjct: 361 FKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 420

Query: 421 SAADSDVLNNVQERFEVDIKELPEQIDTSTYSI-AIIDVEIFSI 443
           SA+DSDVLN VQERFEVDIKELPEQIDTSTY+  A+++  I S+
Sbjct: 421 SASDSDVLNQVQERFEVDIKELPEQIDTSTYNFKALLECLITSM 457

[Close]

BLAST of Carg03924 vs. TAIR10
Match: AT5G11170.1 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 746.5 bits (1926), Expect = 1.0e-215
Identity = 387/444 (87.16%), Postives = 399/444 (89.86%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL- 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELL 
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  ------------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
                       +QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 300
           CKKFMQD                   PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN
Sbjct: 241 CKKFMQD-------------------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 300

Query: 301 DLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR 360
           DLLDALDFNQVVIFVKSVSRAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKR
Sbjct: 301 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKR 360

Query: 361 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDV 420
           ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+V
Sbjct: 361 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEV 420

Query: 421 LNNVQERFEVDIKELPEQIDTSTY 431
           LN VQERFEVDIKELPEQIDTSTY
Sbjct: 421 LNQVQERFEVDIKELPEQIDTSTY 424

[Close]

BLAST of Carg03924 vs. TAIR10
Match: AT5G11200.2 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 739.6 bits (1908), Expect = 1.2e-213
Identity = 393/485 (81.03%), Postives = 406/485 (83.71%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL- 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELL 
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  ------------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
                       +QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQD-----------------------------------------PFREFTGILEEY 300
           CKKFMQD                                          F   T I EE 
Sbjct: 241 CKKFMQDFLENETVSVRLFSFGVENSEWRLCSFGFIVLVWVSMFRAILMFHSKTHIFEEK 300

Query: 301 VGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 360
              T + PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 301 RW-TRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 360

Query: 361 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 420
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 361 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 420

Query: 421 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 431
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 421 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 480

[Close]

BLAST of Carg03924 vs. TAIR10
Match: AT2G45810.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 232.6 bits (592), Expect = 4.9e-61
Identity = 139/397 (35.01%), Postives = 218/397 (54.91%), Query Frame = 0


Query: 48  FRDFLLKPELL-------------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
           F D+ LK +LL             +Q E IP A+ G D++ +AK+G GKT  F + TL++
Sbjct: 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEK 215

Query: 108 IDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECP 167
           IDP    + A++L  TRELA Q     +  S YL  ++V V  GG +++   D+++   P
Sbjct: 216 IDPENNVIQAVILVPTRELALQTSQVCKELSKYL-KIEVMVTTGGTSLR--DDIMRLYQP 275

Query: 168 -HIVVGTPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 227
            H++VGTPGRIL L +     LK+    ++DE DK+L S++ +  ++E+ +  P  +Q++
Sbjct: 276 VHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLL-SVEFQPSIEELIQFLPESRQIL 335

Query: 228 MFSATLSKEIRPVCKKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHY 287
           MFSAT    ++    ++++ P+              ++  M+       +LTL G+ Q+Y
Sbjct: 336 MFSATFPVTVKSFKDRYLKKPY--------------IINLMD-------QLTLMGVTQYY 395

Query: 288 IKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEER 347
             + E +K   LN L   L  NQ +IF  SV+R   L K + E  +    IH+ M Q+ R
Sbjct: 396 AFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHR 455

Query: 348 LTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 407
              +  F+ G  R LV TDL  RGIDI+ VN+VIN+D P ++++YLHRVGR+GRFG  GL
Sbjct: 456 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGL 515

Query: 408 AITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTY 431
           A+  V +  D   +   ++    +IK +P  ID + Y
Sbjct: 516 AVNLV-TYEDRFKMYQTEQELGTEIKPIPSLIDKAIY 526

[Close]

BLAST of Carg03924 vs. TAIR10
Match: AT4G00660.2 (RNAhelicase-like 8)

HSP 1 Score: 232.3 bits (591), Expect = 6.4e-61
Identity = 142/397 (35.77%), Postives = 215/397 (54.16%), Query Frame = 0


Query: 48  FRDFLLKPELL-------------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
           F D+ LK ELL             +Q E IP A+ G D++ +AK+G GKTA F +  L++
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192

Query: 108 IDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECP 167
           ID     + A+++  TRELA Q     +    +L  ++V V  GG ++K   D+++   P
Sbjct: 193 IDQDNNVIQAVIIVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDIMRLYQP 252

Query: 168 -HIVVGTPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 227
            H++VGTPGRIL LT+     LK+    ++DE DK+L S + +  V+ +    P  +Q++
Sbjct: 253 VHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLL-SQEFQPSVEHLISFLPESRQIL 312

Query: 228 MFSATLSKEIRPVCKKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHY 287
           MFSAT    ++    +F+ +P+              V+  M+       +LTL G+ Q Y
Sbjct: 313 MFSATFPVTVKDFKDRFLTNPY--------------VINLMD-------ELTLKGITQFY 372

Query: 288 IKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEER 347
             + E +K   LN L   L  NQ +IF  SV+R   L K + E  +    IH+ M Q+ R
Sbjct: 373 AFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 432

Query: 348 LTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 407
              +  F+ G  R LV TDL  RGIDI+ VN+VIN+D P +A+TYLHRVGR+GRFG  GL
Sbjct: 433 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGL 492

Query: 408 AITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTY 431
           A+  + +  D   L  +++    +IK++P  ID + Y
Sbjct: 493 AVNLI-TYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 503

[Close]

BLAST of Carg03924 vs. TAIR10
Match: AT3G61240.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-60
Identity = 140/397 (35.26%), Postives = 217/397 (54.66%), Query Frame = 0


Query: 48  FRDFLLKPELL-------------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
           F D+ LK +LL             +Q E IP A+ G D++ +AK+G GKT  F +  L++
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185

Query: 108 IDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECP 167
           IDP    + A++L  TRELA Q     +  S YL +++V V  GG +++   D+++   P
Sbjct: 186 IDPNNNVIQAMILVPTRELALQTSQVCKELSKYL-NIQVMVTTGGTSLR--DDIMRLHQP 245

Query: 168 -HIVVGTPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 227
            H++VGTPGRIL LT+     LK+    ++DE DK+L S + +  ++E+ +  P ++Q +
Sbjct: 246 VHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLL-SAEFQPSLEELIQFLPQNRQFL 305

Query: 228 MFSATLSKEIRPVCKKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHY 287
           MFSAT    ++    + ++ P+              V+  M+       +LTL G+ Q+Y
Sbjct: 306 MFSATFPVTVKAFKDRHLRKPY--------------VINLMD-------QLTLMGVTQYY 365

Query: 288 IKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEER 347
             + E +K   LN L   L  NQ +IF  SV+R   L K + E  +    IH+ M Q+ R
Sbjct: 366 AFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHR 425

Query: 348 LTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 407
              +  F+ G  R LV TDL  RGIDI+ VN+VIN+D P ++++YLHRVGR+GRFG  GL
Sbjct: 426 NRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGL 485

Query: 408 AITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTY 431
           A+  V +  D   +   ++    +IK +P  ID + Y
Sbjct: 486 AVNLV-TYEDRFKMYQTEQELGTEIKPIPSNIDQAIY 496

[Close]

BLAST of Carg03924 vs. Swiss-Prot
Match: sp|Q56XG6|RH15_ARATH (DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana OX=3702 GN=RH15 PE=1 SV=3)

HSP 1 Score: 746.5 bits (1926), Expect = 1.8e-214
Identity = 387/444 (87.16%), Postives = 399/444 (89.86%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL- 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELL 
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  ------------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
                       +QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 300
           CKKFMQD                   PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN
Sbjct: 241 CKKFMQD-------------------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 300

Query: 301 DLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR 360
           DLLDALDFNQVVIFVKSVSRAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKR
Sbjct: 301 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKR 360

Query: 361 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDV 420
           ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+V
Sbjct: 361 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEV 420

Query: 421 LNNVQERFEVDIKELPEQIDTSTY 431
           LN VQERFEVDIKELPEQIDTSTY
Sbjct: 421 LNQVQERFEVDIKELPEQIDTSTY 424

[Close]

BLAST of Carg03924 vs. Swiss-Prot
Match: sp|Q9LFN6|RH56_ARATH (DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana OX=3702 GN=RH56 PE=1 SV=2)

HSP 1 Score: 746.5 bits (1926), Expect = 1.8e-214
Identity = 387/444 (87.16%), Postives = 399/444 (89.86%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL- 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELL 
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  ------------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
                       +QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 300
           CKKFMQD                   PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN
Sbjct: 241 CKKFMQD-------------------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 300

Query: 301 DLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR 360
           DLLDALDFNQVVIFVKSVSRAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKR
Sbjct: 301 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKR 360

Query: 361 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDV 420
           ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+V
Sbjct: 361 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEV 420

Query: 421 LNNVQERFEVDIKELPEQIDTSTY 431
           LN VQERFEVDIKELPEQIDTSTY
Sbjct: 421 LNQVQERFEVDIKELPEQIDTSTY 424

[Close]

BLAST of Carg03924 vs. Swiss-Prot
Match: sp|Q5JK84|RH15_ORYSJ (DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=AIP2 PE=1 SV=1)

HSP 1 Score: 713.0 bits (1839), Expect = 2.2e-204
Identity = 371/444 (83.56%), Postives = 387/444 (87.16%), Query Frame = 0


Query: 3   ETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAG--KKGYVGIHSSGFRDFLLKPELL- 62
           E +DNE YEE+L+DYEEE E   D   A  N  A   KKGYVGIHSSGFRDFLLKPELL 
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGADGGAAAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 63  ------------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 122
                       +QHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQIDPVAGQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 123 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 182
           LCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CPHIVVGTPGRILA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 183 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 242
           L R+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 185 LAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 244

Query: 243 CKKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 302
           CKKFMQD                   PMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLN
Sbjct: 245 CKKFMQD-------------------PMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLN 304

Query: 303 DLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR 362
           DLLDALDFNQVVIFVKSVSRAAEL+KLL ECNFP+I IHSGM+QEERLTRYK FKEGHKR
Sbjct: 305 DLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKR 364

Query: 363 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDV 422
           ILVATDLVGRGIDIERVNIVINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSA+DSDV
Sbjct: 365 ILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDV 424

Query: 423 LNNVQERFEVDIKELPEQIDTSTY 431
           LN VQERFEVDIKELPEQIDTSTY
Sbjct: 425 LNQVQERFEVDIKELPEQIDTSTY 429

[Close]

BLAST of Carg03924 vs. Swiss-Prot
Match: sp|Q0JM17|RH56_ORYSJ (DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica OX=39947 GN=AIP1 PE=1 SV=2)

HSP 1 Score: 710.7 bits (1833), Expect = 1.1e-203
Identity = 370/444 (83.33%), Postives = 386/444 (86.94%), Query Frame = 0


Query: 3   ETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAG--KKGYVGIHSSGFRDFLLKPELL- 62
           E +DNE YEE+L+DYEEE E   D      N  A   KKGYVGIHSSGFRDFLLKPELL 
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGTDGGANAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 63  ------------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 122
                       +QHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQIDPVAGQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 123 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 182
           LCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CPHIVVGTPGRILA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 183 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 242
           L R+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 185 LAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 244

Query: 243 CKKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 302
           CKKFMQD                   PMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLN
Sbjct: 245 CKKFMQD-------------------PMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLN 304

Query: 303 DLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR 362
           DLLDALDFNQVVIFVKSVSRAAEL+KLL ECNFP+I IHSGM+QEERLTRYK FKEGHKR
Sbjct: 305 DLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKR 364

Query: 363 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDV 422
           ILVATDLVGRGIDIERVNIVINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSA+DSDV
Sbjct: 365 ILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDV 424

Query: 423 LNNVQERFEVDIKELPEQIDTSTY 431
           LN VQERFEVDIKELPEQIDTSTY
Sbjct: 425 LNQVQERFEVDIKELPEQIDTSTY 429

[Close]

BLAST of Carg03924 vs. Swiss-Prot
Match: sp|Q5WR10|DX39B_CANLF (Spliceosome RNA helicase DDX39B OS=Canis lupus familiaris OX=9615 GN=DDX39B PE=3 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 1.1e-163
Identity = 296/440 (67.27%), Postives = 351/440 (79.77%), Query Frame = 0


Query: 6   DNEYEEELLDYEEEE-EKAPDSVGAKVNGEAGKKG-YVGIHSSGFRDFLLKPELL----- 65
           +N+ + ELLDYEE+E E A    G++   +   KG YV IHSSGFRDFLLKPELL     
Sbjct: 3   ENDVDNELLDYEEDEVETAAGGDGSEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62

Query: 66  --------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHT 125
                   +QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ++PV GQVS LV+CHT
Sbjct: 63  CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHT 122

Query: 126 RELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALTRD 185
           RELA+QI  E+ERFS Y+P++KVAVF+GG++IK  +++LK  CPHIVVGTPGRILAL R+
Sbjct: 123 RELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN 182

Query: 186 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 245
           K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKF 242

Query: 246 MQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLD 305
           MQD                   PMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD
Sbjct: 243 MQD-------------------PMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLD 302

Query: 306 ALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVA 365
            L+FNQVVIFVKSV R   L +LLVE NFP+I IH GM QEERL+RY+ FK+  +RILVA
Sbjct: 303 VLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVA 362

Query: 366 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNV 425
           T+L GRG+DIERVNI  NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS   D+ +LN+V
Sbjct: 363 TNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 422

Query: 426 QERFEVDIKELPEQIDTSTY 431
           Q+RFEV+I ELP++ID S+Y
Sbjct: 423 QDRFEVNISELPDEIDISSY 423

[Close]

BLAST of Carg03924 vs. TrEMBL
Match: tr|A0A1S3BC35|A0A1S3BC35_CUCME (DEAD-box ATP-dependent RNA helicase 56 OS=Cucumis melo OX=3656 GN=LOC103488306 PE=4 SV=1)

HSP 1 Score: 794.7 bits (2051), Expect = 1.2e-226
Identity = 408/443 (92.10%), Postives = 411/443 (92.78%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL-- 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL  
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  -----------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
                      +QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           +RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 300
           KKFMQD                   PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND
Sbjct: 241 KKFMQD-------------------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 300

Query: 301 LLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI 360
           LLDALDFNQVVIFVKSV+RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI
Sbjct: 301 LLDALDFNQVVIFVKSVNRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI 360

Query: 361 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL 420
           LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL
Sbjct: 361 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL 420

Query: 421 NNVQERFEVDIKELPEQIDTSTY 431
           NNVQERFEVDIKELPEQIDTSTY
Sbjct: 421 NNVQERFEVDIKELPEQIDTSTY 424

[Close]

BLAST of Carg03924 vs. TrEMBL
Match: tr|A0A0A0LSH7|A0A0A0LSH7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381720 PE=4 SV=1)

HSP 1 Score: 794.7 bits (2051), Expect = 1.2e-226
Identity = 408/443 (92.10%), Postives = 411/443 (92.78%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL-- 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL  
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  -----------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
                      +QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           +RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 300
           KKFMQD                   PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND
Sbjct: 241 KKFMQD-------------------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 300

Query: 301 LLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI 360
           LLDALDFNQVVIFVKSV+RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI
Sbjct: 301 LLDALDFNQVVIFVKSVNRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRI 360

Query: 361 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL 420
           LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL
Sbjct: 361 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVL 420

Query: 421 NNVQERFEVDIKELPEQIDTSTY 431
           NNVQERFEVDIKELPEQIDTSTY
Sbjct: 421 NNVQERFEVDIKELPEQIDTSTY 424

[Close]

BLAST of Carg03924 vs. TrEMBL
Match: tr|A0A2P5QU87|A0A2P5QU87_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD24979 PE=4 SV=1)

HSP 1 Score: 774.6 bits (1999), Expect = 1.3e-220
Identity = 403/464 (86.85%), Postives = 420/464 (90.52%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL- 60
           MGETRDN+ YEEELLDYEEEEEKAPDSV AKVNG+AGKKGYVGIHSSGFRDFLLKPELL 
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGDAGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  -------------------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVA 120
                               QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  
Sbjct: 61  AIVDSGFEHPSEGKFILSFFQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTP 120

Query: 121 GQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVG 180
           GQV ALVLCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIK+HKDLLKNECPH+VVG
Sbjct: 121 GQVVALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHVVVG 180

Query: 181 TPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 240
           TPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL
Sbjct: 181 TPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 240

Query: 241 SKEIRPVCKKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEM 300
           SKEIRPVCKKFMQD    F G  + Y+    LEPMEIYVDDEAKLTLHGLVQHYIKLSE+
Sbjct: 241 SKEIRPVCKKFMQDVM--FRG--QYYLN---LEPMEIYVDDEAKLTLHGLVQHYIKLSEL 300

Query: 301 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKG 360
           EKNRKLNDLLDALDFNQVVIFVKSVSRAAEL+KLL+ECNFPSICIHSGMSQEERLTRYKG
Sbjct: 301 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLMECNFPSICIHSGMSQEERLTRYKG 360

Query: 361 FKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 420
           FKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS
Sbjct: 361 FKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 420

Query: 421 SAADSDVLNNVQERFEVDIKELPEQIDTSTYSI-AIIDVEIFSI 443
           SA+DSDVLN VQERFEVDIKELPEQIDTSTY+  A+++  I S+
Sbjct: 421 SASDSDVLNQVQERFEVDIKELPEQIDTSTYNFKALLECLITSM 457

[Close]

BLAST of Carg03924 vs. TrEMBL
Match: tr|A0A1U8PGN2|A0A1U8PGN2_GOSHI (DEAD-box ATP-dependent RNA helicase 56-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107958960 PE=4 SV=1)

HSP 1 Score: 771.2 bits (1990), Expect = 1.4e-219
Identity = 397/444 (89.41%), Postives = 405/444 (91.22%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL- 60
           MGETRDN+ YEEELLDYEEEEEKAPDSV AKVNGE GKKGYVGIHSSGFRDFLLKPELL 
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGEGGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  ------------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
                       +QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQV ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVIALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIK+HKDLLKNECPHIVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILA 180

Query: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 300
           CKKFMQD                   PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN
Sbjct: 241 CKKFMQD-------------------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 300

Query: 301 DLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR 360
           DLLDALDFNQVVIFVKSV+RAAEL+KLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR
Sbjct: 301 DLLDALDFNQVVIFVKSVNRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR 360

Query: 361 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDV 420
           ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSDV
Sbjct: 361 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDV 420

Query: 421 LNNVQERFEVDIKELPEQIDTSTY 431
           LN VQERFEVDIKELPEQIDTSTY
Sbjct: 421 LNQVQERFEVDIKELPEQIDTSTY 425

[Close]

BLAST of Carg03924 vs. TrEMBL
Match: tr|A0A0D2TEF2|A0A0D2TEF2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G057600 PE=4 SV=1)

HSP 1 Score: 771.2 bits (1990), Expect = 1.4e-219
Identity = 397/444 (89.41%), Postives = 405/444 (91.22%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELL- 60
           MGETRDN+ YEEELLDYEEEEEKAPDSV AKVNGE GKKGYVGIHSSGFRDFLLKPELL 
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGEGGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  ------------LQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
                       +QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQV ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVIALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIK+HKDLLKNECPHIVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILA 180

Query: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPFREFTGILEEYVGDTVLEPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 300
           CKKFMQD                   PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN
Sbjct: 241 CKKFMQD-------------------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 300

Query: 301 DLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR 360
           DLLDALDFNQVVIFVKSV+RAAEL+KLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR
Sbjct: 301 DLLDALDFNQVVIFVKSVNRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR 360

Query: 361 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDV 420
           ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSDV
Sbjct: 361 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDV 420

Query: 421 LNNVQERFEVDIKELPEQIDTSTY 431
           LN VQERFEVDIKELPEQIDTSTY
Sbjct: 421 LNQVQERFEVDIKELPEQIDTSTY 425

The following BLAST results are available for this feature:

BLAST of Carg03924 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951402.1	2.8e-227	92.55	DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita moschata] >XP_022951403.1...	[more]
XP_022961952.1	8.0e-227	92.33	DEAD-box ATP-dependent RNA helicase 56 [Cucurbita moschata] >XP_022961953.1 DEAD...	[more]
XP_008445205.1	1.8e-226	92.10	PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis melo] >XP_008445206.1...	[more]
XP_022996719.1	2.3e-226	92.10	DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita maxima] >XP_022996720.1 D...	[more]
PPD78093.1	1.9e-220	86.85	hypothetical protein GOBAR_DD24979 [Gossypium barbadense]	[more]

BLAST of Carg03924 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11170.1	1.0e-215	87.16	DEAD/DEAH box RNA helicase family protein	[more]
AT5G11200.2	1.2e-213	81.03	DEAD/DEAH box RNA helicase family protein	[more]
AT2G45810.1	4.9e-61	35.01	DEA(D/H)-box RNA helicase family protein	[more]
AT4G00660.2	6.4e-61	35.77	RNAhelicase-like 8	[more]
AT3G61240.1	1.9e-60	35.26	DEA(D/H)-box RNA helicase family protein	[more]

BLAST of Carg03924 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q56XG6\|RH15_ARATH	1.8e-214	87.16	DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana OX=3702 GN=RH15 P...	[more]
sp\|Q9LFN6\|RH56_ARATH	1.8e-214	87.16	DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana OX=3702 GN=RH56 P...	[more]
sp\|Q5JK84\|RH15_ORYSJ	2.2e-204	83.56	DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
sp\|Q0JM17\|RH56_ORYSJ	1.1e-203	83.33	DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
sp\|Q5WR10\|DX39B_CANLF	1.1e-163	67.27	Spliceosome RNA helicase DDX39B OS=Canis lupus familiaris OX=9615 GN=DDX39B PE=3...	[more]

BLAST of Carg03924 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BC35\|A0A1S3BC35_CUCME	1.2e-226	92.10	DEAD-box ATP-dependent RNA helicase 56 OS=Cucumis melo OX=3656 GN=LOC103488306 P...	[more]
tr\|A0A0A0LSH7\|A0A0A0LSH7_CUCSA	1.2e-226	92.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381720 PE=4 SV=1	[more]
tr\|A0A2P5QU87\|A0A2P5QU87_GOSBA	1.3e-220	86.85	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD24979 PE=4 SV...	[more]
tr\|A0A1U8PGN2\|A0A1U8PGN2_GOSHI	1.4e-219	89.41	DEAD-box ATP-dependent RNA helicase 56-like isoform X1 OS=Gossypium hirsutum OX=...	[more]
tr\|A0A0D2TEF2\|A0A0D2TEF2_GOSRA	1.4e-219	89.41	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G057600 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR011545	DEAD/DEAH_box_helicase_dom
IPR001650	Helicase_C
IPR014001	Helicase_ATP-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03924-RA	Carg03924-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 51..257 e-value: 1.2E-47 score: 174.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 64..237 score: 25.618
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 308..389 e-value: 1.3E-30 score: 117.7
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 282..389 e-value: 2.8E-27 score: 95.2
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 284..429 score: 22.659
IPR001650	Helicase, C-terminal	CDD	cd00079	HELICc	coord: 270..397 e-value: 1.27736E-37 score: 133.902
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 41..236 e-value: 1.2E-55 score: 189.9
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 270..434 e-value: 3.6E-52 score: 178.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR24031:SF530	SUBFAMILY NOT NAMED	coord: 2..430
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 2..430
None	No IPR available	CDD	cd00268	DEADc	coord: 48..236 e-value: 4.43387E-73 score: 230.834
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 60..223 e-value: 2.0E-37 score: 128.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 102..235 coord: 267..400

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03924	Cla022322	Watermelon (97103) v1	carwmB0978
Carg03924	Csa2G381720	Cucumber (Chinese Long) v2	carcuB0987
Carg03924	MELO3C011256	Melon (DHL92) v3.5.1	carmeB0955
Carg03924	ClCG08G013310	Watermelon (Charleston Gray)	carwcgB0958
Carg03924	CSPI02G23480	Wild cucumber (PI 183967)	carcpiB1010
Carg03924	Cucsa.162420	Cucumber (Gy14) v1	carcgyB1091
Carg03924	CmaCh05G003860	Cucurbita maxima (Rimu)	carcmaB1357
Carg03924	CmaCh12G003360	Cucurbita maxima (Rimu)	carcmaB1349
Carg03924	CmoCh05G003860	Cucurbita moschata (Rifu)	carcmoB1319
Carg03924	CmoCh12G002850	Cucurbita moschata (Rifu)	carcmoB1310
Carg03924	Lsi08G012010	Bottle gourd (USVL1VR-Ls)	carlsiB898
Carg03924	Cp4.1LG11g03160	Cucurbita pepo (Zucchini)	carcpeB1352
Carg03924	Cp4.1LG07g02940	Cucurbita pepo (Zucchini)	carcpeB1368
Carg03924	CsGy2G023240	Cucumber (Gy14) v2	carcgybB0960
Carg03924	MELO3C011256.2	Melon (DHL92) v3.6.1	carmedB0961
Carg03924	CsaV3_2G032030	Cucumber (Chinese Long) v3	carcucB1015
Carg03924	Cla97C08G156690	Watermelon (97103) v2	carwmbB1034
Carg03924	Bhi04G000786	Wax gourd	carwgoB1145

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03924	Carg09332	Silver-seed gourd	carcarB168

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03924	Cucurbita moschata (Rifu)	carcmoB1308
Carg03924	Cucurbita moschata (Rifu)	carcmoB1311
Carg03924	Cucurbita moschata (Rifu)	carcmoB1313
Carg03924	Cucurbita moschata (Rifu)	carcmoB1315
Carg03924	Cucurbita pepo (Zucchini)	carcpeB1354
Carg03924	Cucurbita pepo (Zucchini)	carcpeB1356
Carg03924	Cucurbita pepo (Zucchini)	carcpeB1363
Carg03924	Cucurbita pepo (Zucchini)	carcpeB1366
Carg03924	Wild cucumber (PI 183967)	carcpiB1011
Carg03924	Wild cucumber (PI 183967)	carcpiB1016
Carg03924	Cucumber (Chinese Long) v2	carcuB0988
Carg03924	Cucumber (Chinese Long) v2	carcuB0993
Carg03924	Cucumber (Chinese Long) v3	carcucB1016
Carg03924	Cucumber (Chinese Long) v3	carcucB1021
Carg03924	Bottle gourd (USVL1VR-Ls)	carlsiB895
Carg03924	Melon (DHL92) v3.5.1	carmeB0957
Carg03924	Melon (DHL92) v3.6.1	carmedB0963
Carg03924	Watermelon (Charleston Gray)	carwcgB0957
Carg03924	Watermelon (Charleston Gray)	carwcgB0951
Carg03924	Watermelon (Charleston Gray)	carwcgB0955
Carg03924	Watermelon (97103) v1	carwmB0980
Carg03924	Watermelon (97103) v1	carwmB0982
Carg03924	Watermelon (97103) v2	carwmbB1031
Carg03924	Watermelon (97103) v2	carwmbB1033
Carg03924	Wax gourd	carwgoB1151
Carg03924	Silver-seed gourd	carcarB239
Carg03924	Silver-seed gourd	carcarB529
Carg03924	Silver-seed gourd	carcarB558
Carg03924	Silver-seed gourd	carcarB572
Carg03924	Cucumber (Gy14) v2	carcgybB0961
Carg03924	Cucumber (Gy14) v2	carcgybB0965
Carg03924	Cucumber (Gy14) v1	carcgyB1096
Carg03924	Cucurbita maxima (Rimu)	carcmaB1347
Carg03924	Cucurbita maxima (Rimu)	carcmaB1350
Carg03924	Cucurbita maxima (Rimu)	carcmaB1353
Carg03924	Cucurbita maxima (Rimu)	carcmaB1359