Carg09332 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09332
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ATP-dependent RNA helicase
Location	Cucurbita_argyrosperma_scaffold_018 : 748646 .. 753803 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATAACCCCCTCCGCACTTCCACCCTGCGCTCTACGATATTTTGGAAACCCAGGTCTTAACATTTTCTCTCCAGCTAACTTACTTTTCCTTTGCAGACTTCGTGAAATCGCAACCTAACTCTTAAGTCGAGTTCATAGCAGGCTACCAGGTAATCTCAATCACTCTGTTCCAAGCCTTAATTTTTCTTTTTTTGATGTTTTAAACCCTAGTTTTGGTTTAGGGTTGGATTTGCTTTCTGTGATCTCGAAATTTAGTTTGTTCTCTGGGTTTTATGTGTAGGAAGAAATGGGAGAAACAAGAGACAACGAATATGAGGAAGAGCTCCTCGACTACGAGGAAGAGGAAGAGAAGGCCCCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGTGAGTGGTCTATTACTTTGTTCTATATAGGTTTGCTTATGGATAATTTAATAGTCCAATACTTGACCGAGGATTGTCGAACTCATAATATGATAAAATTTGAGATTTGGAAGTAATTTTATTCGTTTGGTAGAGTTGAGAGTTAAGGCGGGTTGGAATAAGTAGTTGTTTGAGTTTGAGTGAACTTAAATGAGATGATTTATTTTTCATGCTACATCTTTCTTGAAAAATATGTTTTTTCCTTCCATTTTGGGGATTTTCCCCTGTATTGTCGCATTTTTTTGTTTGTTGAGATCCTTACCTTCTTTCTTTTCTTCGATTTCAGGGGTTATGTTGGAATTCATAGTTCGGGATTCAGAGACTTCCTATTGAAGCCAGAGCTTCTCCGTGCTATTGTAGACTCTGGGTTTGAGCATCCATCTGAAGGCAAATTTCTAATCTTTATTTTCAATAGATGAATCTTAAGACGAAGTGGCCATGTAATTTAAATTGGCACAATTATTCTTAAATTTTTTATTAACAGGATTTTAAAGGAACATCTTTAAGACCCTACTTTGTGCGGATGCAGTATCTCACTAACCCGTAACAAATATCTGTCAACTCTGGTTTCATTTTGAAGTTCATAATTATTGGTTATTGGGTTTTGTAGCTTGTGTAGGATTTGTCAACTTATCACGTCATAAATAGGATAGAGTTAATTGGGTGTTGCGTTGGTATGTTATACGAACGGGTTTTTAGTTTATAATAGAAGCCTACGATGTTCATCACTTGTTACTATGCTGCAGTCTTCATGTGTTCATGACCTTAATTTAACGCTTCCTTGAGAACACTTGATGCTATTAATTTATAATTGTGTTTCAAATAGAGAGAATTATTGACACATTTCTTGAACAGTATAGCATGGATGTACTCGCACAAACACATCAATTTGGAATACTTGTCTTTCTTGATTCTGCTATTTCCATATGTTCTTATTGCTCTGTATATATGATATCGCTTAAGCACATGCTTTTCTTAACCAGCACATGTTAGATGTTTATATAAGTTTTTTAATGGTTTGCAGGTAATAAATTAATATCATAATCTTGATTTTGGAGCAATGTATATGGTTTGATAAACCTTTCGCATAAAAGGATCGGAGACGTTATAATTTACTTACCAACGGTTCATTTGGTTCGATCCTTTTCTTTGGTTCTTCATCAGTGCAACACGAATGTATTCCCCAAGCTATTCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGCAAAACTGCTGTTTTTGTTCTGTCAACACTGCAGCAGATTGACCCTGTTGCTGGTCAAGTTTCTGCACTAGTTCTGTGCCATACAAGGGAGCTTGCATACCAGGTGCATAAATGTGTTGCTTATCTTTTTAAATTTTGGTTCTCTTAAAACATATACAGAATTTAATTCCTTGCATTATTTGTGTATCTAGCCCTGACTCTTTTTTTGTACCACTTTAGATCTGTCATGAATTTGAGAGGTTCAGCACTTATCTTCCCGATCTAAAGGTTGCTGTCTTCTATGGTGGGGTGAATATTAAAATTCACAAAGATCTTCTGAAAAATGAATGTCCTCATATTGTTGTTGGAACACCTGGAAGGATACTGGCATTGTCAAGAGACAAGGACCTATCTCTGAAGAACGTCCGACATTTTATCTTGGATGAGTGTGACAAGATGCTCGAGTCCCTTGGTATATTTTCTTTTGATAATCATTTGTTCTTCAAAGTTCTATTAGATTCTCCACTTTATATTAGTTTATCCAAGTTCTCTATTTGTTTCCCTTCATCCTGGTCCTTTTATATCTCATGGCTATGTTTTAATACATGTATAAATTGGCATTGGCATATTTTCTTACTGTGCACTCTACATGTGCTCTACAGATATGCGGAGAGACGTACAGGAAATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTCTCTGCAACCCTCAGCAAAGAAATCCGCCCAGTTTGCAAAAAGTTTATGCAAGATGTAATGTCCCACAGCTAGTAAACCTTGAATTTAGAAGTTTTTTCCCTTTAAATTTCATTTTCTCCTAGAGTTTTCAAATTGTGGTTTTTACAGTAGGGTTTCCTACTCGTTATTTGAGGGGGATCTGTTTAGTACTATCTTTTATCCGCCATCACCTACAGCTCGTGCGGGAATTTTCTAGTCTTGGAGGAATAATAGTTGGTGATACTGTTTAGTGGTTCTGAAGTAGTAGTTGGTGATTGAAGCCACTCAGTTCTTTCTTCTTAGTCTCCCGTTGCATGTCACTTGTTATTCTCGTATTTGGTTATGGTTGTTGGATTCTGGTTCCAACTTCCAACTTTGCGGTCATGAGTATCCAAGTTAGGGGATGAGAAAAAAAAGAAGGATCCTATCGGATTCTTGTGTATTAGTGTAATAGTCTGCATCTGCGGCATTTCTTGATGAATATAGACGTATCTGCAAGGGGAGGCAGAACAGTTGACCACAATCTTGATTCATGGGATGAACATGCTCTTTCATTTCCTTCATCTTGAGGAAGTATTATGATTTACCATGACGTTTGTTCCTTTCAGCCAATGGAAATATATGTAGATGACGAGGCAAAGCTGACCTTGCATGGTCTTGTCCAGGTACATGGTTGTGACATTGTATGAATAGATTGTCTTTTTTTTTTTTTGTGCTTTCCCTAAAATTTGTTTTGGGAATATCAGCATTACATCAAATTGAGCGAGATGGAGAAAAATCGGAAGCTGAACGACCTCCTTGATGCGTTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAGTAGAGCAGCTGAGCTGGATAAGTTGTTGGTGGAGTGTAATTTTCCCTCTATATGCATCCACTCTGGCATGTCTCAAGAAGAGAGGTAGGTCCAACATTTTTTTTTCAGGTTAAAAAATTTCATATTCATTTATGCCTCGGTATATTGATTTTTCATTTATTAATGTTACTACTAAAGGGCATGCAAAACGTTGATCTTCATTTTTGAGGTTAGCTATGGTATAGTTACTGAAGTGTTTTTGTTGAAATTTGAATTTTCATCTTCTTCTTGTCCTTATTTTTATTTTCCTTTTACATTTGAATTCTCTAGATGTAGAACTTTTGTCCCTGCAGTTGTCATACTTCATTAACGTTGGGAAGTTGTGAAATTGCCCATTTCAATTTGTTATTTATGAAGGTGGTTGATCTTCTTGAGGTCAGTGACTAATATAAAAAGATGATGTGCCAGGTTGACTCGATACAAGGGCTTTAAAGAAGGACATAAGCGGATTCTTGTGGCAACAGATTTGGTTGGTCGAGGAATTGACATTGAACGTGTAAACATTGTCATCAATTATGACATGCCAGATTCTGCTGATACTTATTTGCACAGGGTAAAGTGGACCTACTTATTTTAATGTTCATCATGCATACATTGTGCTTCCCGAGTGTGTATAATGAGTCTTCCTTCGAATATCCTACAGGTCGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACTTTTGTATCATCTGCAGCTGATTCTGATGTTCTCAATAATGTATGTAATTTCCAGTTGTTACATAGTGTGGCCATTAGATGGGTGTTTTCATAGTCTTGGTTATTGTAGGTTCAAGAAAGGTTCGAAGTCGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACATACAGTATGTTTTCTTGTTTCCTTCTTTTGAGATTATTCTCCATTTTGAACTCCAATTCCTCGTAGTTTACGTTTTATCCTTCATTTGATATTATATCATTATCATTTAGTTTTCCCTTTTCCCTGTCGTGTGGTAAACCTCGGTACTGTCTTCTTTTTATTTTCTTTTTGTTGTCACTTGTCAGTCAGTTGCAATTAAATTTTCAATGGTAAATTCAAGCCCATGGTTTAAAAGAAACACGTTAATATTTTTGTCTGTCTTTGCATTTTCCGCTCTGTTGGTTGCATCTTGTAAATTCTAAAAGCCCCACGTGCTTTCAACGCATTTACAATAGAATTTGTCCTATTAGTCAGACAATCAAGAGTTTTCTCTGCTATGTTTATACGTTCTTCTCACGAGTTATGTCAAATTTTTGTCTTGTTGGTTGCAGTGCCATCATAGACGTAGAGATCATCAGCATAGAAATCGGCTACCTGGGTTGGTGAGGGGTTGGTTCACATGTCATTGTAGTTTGATTTTGATTCGGACTAAAAATGGATGGAAGCCACTGCACTCACTAGCTTTGATGTGAAGGAGGGCAATGGTGGATGCGCTAAATGTGGGTGGTGGTGGGTGTACCCTGCCATTTGAGTTTATTGTATTCTAATTGCTGGGGCTGTCTTGCATGGAAGAAGTCTCTATATGCGTTTTATTCTGAATCGCGAATGGTACAACAACAAATGTATTACTTTAGATATTCCTCTCTGCAAGACTAACAATAACGGTAGACTGGTTGGTTGGTAGTATTTGCAGTGATTTTATCGGATTCCTTCTGTGAACCCATTTCACTAAGTTCCATGGCTACACCTGGTTCTCTCCTCACTGCCCCTATTGCCTGATGTTTTGATGCCAATTTCACCGGAGATTTAGCTTGCAAATCAACACACCAAGTTTTGTGAATGAGATGTTCATAAATTAGATGCCTGAAATTCATTTCGTATTCTGTTTTAGCCATTCTTGTGATTCTACAAGTTTTGTT

mRNA sequence

TAATAACCCCCTCCGCACTTCCACCCTGCGCTCTACGATATTTTGGAAACCCAGCTAACTTACTTTTCCTTTGCAGACTTCGTGAAATCGCAACCTAACTCTTAAGTCGAGTTCATAGCAGGCTACCAGGAAGAAATGGGAGAAACAAGAGACAACGAATATGAGGAAGAGCTCCTCGACTACGAGGAAGAGGAAGAGAAGGCCCCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGGGTTATGTTGGAATTCATAGTTCGGGATTCAGAGACTTCCTATTGAAGCCAGAGCTTCTCCGTGCTATTGTAGACTCTGGGTTTGAGCATCCATCTGAAGTGCAACACGAATGTATTCCCCAAGCTATTCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGCAAAACTGCTGTTTTTGTTCTGTCAACACTGCAGCAGATTGACCCTGTTGCTGGTCAAGTTTCTGCACTAGTTCTGTGCCATACAAGGGAGCTTGCATACCAGATCTGTCATGAATTTGAGAGGTTCAGCACTTATCTTCCCGATCTAAAGGTTGCTGTCTTCTATGGTGGGGTGAATATTAAAATTCACAAAGATCTTCTGAAAAATGAATGTCCTCATATTGTTGTTGGAACACCTGGAAGGATACTGGCATTGTCAAGAGACAAGGACCTATCTCTGAAGAACGTCCGACATTTTATCTTGGATGAGTGTGACAAGATGCTCGAGTCCCTTGATATGCGGAGAGACGTACAGGAAATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTCTCTGCAACCCTCAGCAAAGAAATCCGCCCAGTTTGCAAAAAGTTTATGCAAGATCCAATGGAAATATATGTAGATGACGAGGCAAAGCTGACCTTGCATGGTCTTGTCCAGCATTACATCAAATTGAGCGAGATGGAGAAAAATCGGAAGCTGAACGACCTCCTTGATGCGTTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAGTAGAGCAGCTGAGCTGGATAAGTTGTTGGTGGAGTGTAATTTTCCCTCTATATGCATCCACTCTGGCATGTCTCAAGAAGAGAGGTTGACTCGATACAAGGGCTTTAAAGAAGGACATAAGCGGATTCTTGTGGCAACAGATTTGGTTGGTCGAGGAATTGACATTGAACGTGTAAACATTGTCATCAATTATGACATGCCAGATTCTGCTGATACTTATTTGCACAGGGTCGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACTTTTGTATCATCTGCAGCTGATTCTGATGTTCTCAATAATGTTCAAGAAAGGTTCGAAGTCGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACATACATGCCATCATAGACGTAGAGATCATCAGCATAGAAATCGGCTACCTGGGTTGGTGAGGGGTTGGTTCACATGTCATTGTAGTTTGATTTTGATTCGGACTAAAAATGGATGGAAGCCACTGCACTCACTAGCTTTGATGTGAAGGAGGGCAATGGTGGATGCGCTAAATGTGGGTGGTGGTGGGTGTACCCTGCCATTTGAGTTTATTGTATTCTAATTGCTGGGGCTGTCTTGCATGGAAGAAGTCTCTATATGCGTTTTATTCTGAATCGCGAATGGTACAACAACAAATGTATTACTTTAGATATTCCTCTCTGCAAGACTAACAATAACGGTAGACTGGTTGGTTGGTAGTATTTGCAGTGATTTTATCGGATTCCTTCTGTGAACCCATTTCATGCCCCTATTGCCTGATGTTTTGATGCCAATTTCACCGGAGATTTAGCTTGCAAATCAACACACCAAGTTTTGTGAATGAGATGTTCATAAATTAGATGCCTGAAATTCATTTCGTATTCTGTTTTAGCCATTCTTGTGATTCTACAAGTTTTGTT

Coding sequence (CDS)

ATGGGAGAAACAAGAGACAACGAATATGAGGAAGAGCTCCTCGACTACGAGGAAGAGGAAGAGAAGGCCCCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGGGTTATGTTGGAATTCATAGTTCGGGATTCAGAGACTTCCTATTGAAGCCAGAGCTTCTCCGTGCTATTGTAGACTCTGGGTTTGAGCATCCATCTGAAGTGCAACACGAATGTATTCCCCAAGCTATTCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGCAAAACTGCTGTTTTTGTTCTGTCAACACTGCAGCAGATTGACCCTGTTGCTGGTCAAGTTTCTGCACTAGTTCTGTGCCATACAAGGGAGCTTGCATACCAGATCTGTCATGAATTTGAGAGGTTCAGCACTTATCTTCCCGATCTAAAGGTTGCTGTCTTCTATGGTGGGGTGAATATTAAAATTCACAAAGATCTTCTGAAAAATGAATGTCCTCATATTGTTGTTGGAACACCTGGAAGGATACTGGCATTGTCAAGAGACAAGGACCTATCTCTGAAGAACGTCCGACATTTTATCTTGGATGAGTGTGACAAGATGCTCGAGTCCCTTGATATGCGGAGAGACGTACAGGAAATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTCTCTGCAACCCTCAGCAAAGAAATCCGCCCAGTTTGCAAAAAGTTTATGCAAGATCCAATGGAAATATATGTAGATGACGAGGCAAAGCTGACCTTGCATGGTCTTGTCCAGCATTACATCAAATTGAGCGAGATGGAGAAAAATCGGAAGCTGAACGACCTCCTTGATGCGTTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAGTAGAGCAGCTGAGCTGGATAAGTTGTTGGTGGAGTGTAATTTTCCCTCTATATGCATCCACTCTGGCATGTCTCAAGAAGAGAGGTTGACTCGATACAAGGGCTTTAAAGAAGGACATAAGCGGATTCTTGTGGCAACAGATTTGGTTGGTCGAGGAATTGACATTGAACGTGTAAACATTGTCATCAATTATGACATGCCAGATTCTGCTGATACTTATTTGCACAGGGTCGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACTTTTGTATCATCTGCAGCTGATTCTGATGTTCTCAATAATGTTCAAGAAAGGTTCGAAGTCGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACATACATGCCATCATAG

Protein sequence

MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTYMPS

Homology

[Close]

BLAST of Carg09332 vs. NCBI nr
Match: XP_022961952.1 (DEAD-box ATP-dependent RNA helicase 56 [Cucurbita moschata] >XP_022961953.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita moschata] >XP_023545958.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita pepo subsp. pepo] >XP_023545959.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 852.0 bits (2200), Expect = 8.4e-244
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of Carg09332 vs. NCBI nr
Match: XP_008445205.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis melo] >XP_008445206.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis melo] >XP_004138728.2 PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis sativus] >XP_011649821.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis sativus] >XP_022131577.1 DEAD-box ATP-dependent RNA helicase 56 [Momordica charantia] >XP_022131578.1 DEAD-box ATP-dependent RNA helicase 56 [Momordica charantia] >KGN62946.1 hypothetical protein Csa_2G381720 [Cucumis sativus])

HSP 1 Score: 850.9 bits (2197), Expect = 1.9e-243
Identity = 426/427 (99.77%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of Carg09332 vs. NCBI nr
Match: XP_022951402.1 (DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita moschata] >XP_022951403.1 DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita moschata] >XP_023002354.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita maxima] >XP_023002355.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita maxima] >XP_023537961.1 DEAD-box ATP-dependent RNA helicase 56-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 850.9 bits (2197), Expect = 1.9e-243
Identity = 426/427 (99.77%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           +RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of Carg09332 vs. NCBI nr
Match: XP_022996719.1 (DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita maxima] >XP_022996720.1 DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita maxima])

HSP 1 Score: 850.5 bits (2196), Expect = 2.5e-243
Identity = 426/427 (99.77%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETR+NEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRENEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of Carg09332 vs. NCBI nr
Match: PIN21605.1 (ATP-dependent RNA helicase [Handroanthus impetiginosus])

HSP 1 Score: 826.2 bits (2133), Expect = 5.0e-236
Identity = 411/428 (96.03%), Postives = 426/428 (99.53%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MGET++N+ YEEELLDYEEEEEKAPDSVGAKVNGE+GKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETKENDAYEEELLDYEEEEEKAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+PVAGQV+ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIKIHK+LLKNECPHIVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKELLKNECPHIVVGTPGRILA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+RDKDLSL+NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLSLRNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL+E+EKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTELEKNRKLNDLLDALDFNQVVIFVKSVN 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTYMPS 428
           DTSTYMPS
Sbjct: 421 DTSTYMPS 428

[Close]

BLAST of Carg09332 vs. TAIR10
Match: AT5G11170.1 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 801.6 bits (2069), Expect = 2.4e-232
Identity = 404/428 (94.39%), Postives = 416/428 (97.20%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTYMPS 428
           DTSTYMPS
Sbjct: 421 DTSTYMPS 427

[Close]

BLAST of Carg09332 vs. TAIR10
Match: AT5G11200.2 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 774.6 bits (1999), Expect = 3.1e-224
Identity = 404/487 (82.96%), Postives = 416/487 (85.42%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQD----------------------------------------------------- 300
           CKKFMQD                                                     
Sbjct: 241 CKKFMQDFLENETVSVRLFSFGVENSEWRLCSFGFIVLVWVSMFRAILMFHSKTHIFEEK 300

Query: 301 ------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 360
                 PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 301 RWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 360

Query: 361 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 420
           AAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 361 AAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIV 420

Query: 421 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 428
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQID
Sbjct: 421 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQID 480

[Close]

BLAST of Carg09332 vs. TAIR10
Match: AT2G45810.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 265.0 bits (676), Expect = 8.0e-71
Identity = 147/378 (38.89%), Postives = 225/378 (59.52%), Query Frame = 0


Query: 48  FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
           F D+ LK +LLR I + GFE PS +Q E IP A+ G D++ +AK+G GKT  F + TL++
Sbjct: 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEK 215

Query: 108 IDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECP 167
           IDP    + A++L  TRELA Q     +  S YL  ++V V  GG +++   D+++   P
Sbjct: 216 IDPENNVIQAVILVPTRELALQTSQVCKELSKYL-KIEVMVTTGGTSLR--DDIMRLYQP 275

Query: 168 -HIVVGTPGRILALSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 227
            H++VGTPGRIL L++     LK+    ++DE DK+L S++ +  ++E+ +  P  +Q++
Sbjct: 276 VHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLL-SVEFQPSIEELIQFLPESRQIL 335

Query: 228 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDAL 287
           MFSAT    ++    ++++ P  I + D+  LTL G+ Q+Y  + E +K   LN L   L
Sbjct: 336 MFSATFPVTVKSFKDRYLKKPYIINLMDQ--LTLMGVTQYYAFVEERQKVHCLNTLFSKL 395

Query: 288 DFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATD 347
             NQ +IF  SV+R   L K + E  +    IH+ M Q+ R   +  F+ G  R LV TD
Sbjct: 396 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTD 455

Query: 348 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQE 407
           L  RGIDI+ VN+VIN+D P ++++YLHRVGR+GRFG  GLA+  V +  D   +   ++
Sbjct: 456 LFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLV-TYEDRFKMYQTEQ 515

Query: 408 RFEVDIKELPEQIDTSTY 425
               +IK +P  ID + Y
Sbjct: 516 ELGTEIKPIPSLIDKAIY 526

[Close]

BLAST of Carg09332 vs. TAIR10
Match: AT4G00660.2 (RNAhelicase-like 8)

HSP 1 Score: 261.9 bits (668), Expect = 6.8e-70
Identity = 148/378 (39.15%), Postives = 220/378 (58.20%), Query Frame = 0


Query: 48  FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
           F D+ LK ELL  I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F +  L++
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192

Query: 108 IDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECP 167
           ID     + A+++  TRELA Q     +    +L  ++V V  GG ++K   D+++   P
Sbjct: 193 IDQDNNVIQAVIIVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDIMRLYQP 252

Query: 168 -HIVVGTPGRILALSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 227
            H++VGTPGRIL L++     LK+    ++DE DK+L S + +  V+ +    P  +Q++
Sbjct: 253 VHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLL-SQEFQPSVEHLISFLPESRQIL 312

Query: 228 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDAL 287
           MFSAT    ++    +F+ +P  I + DE  LTL G+ Q Y  + E +K   LN L   L
Sbjct: 313 MFSATFPVTVKDFKDRFLTNPYVINLMDE--LTLKGITQFYAFVEERQKIHCLNTLFSKL 372

Query: 288 DFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATD 347
             NQ +IF  SV+R   L K + E  +    IH+ M Q+ R   +  F+ G  R LV TD
Sbjct: 373 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 432

Query: 348 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQE 407
           L  RGIDI+ VN+VIN+D P +A+TYLHRVGR+GRFG  GLA+  + +  D   L  +++
Sbjct: 433 LFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLI-TYEDRFNLYRIEQ 492

Query: 408 RFEVDIKELPEQIDTSTY 425
               +IK++P  ID + Y
Sbjct: 493 ELGTEIKQIPPHIDQAIY 503

[Close]

BLAST of Carg09332 vs. TAIR10
Match: AT3G61240.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 260.0 bits (663), Expect = 2.6e-69
Identity = 145/378 (38.36%), Postives = 223/378 (58.99%), Query Frame = 0


Query: 48  FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
           F D+ LK +LL+ I + GFE PS +Q E IP A+ G D++ +AK+G GKT  F +  L++
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185

Query: 108 IDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECP 167
           IDP    + A++L  TRELA Q     +  S YL +++V V  GG +++   D+++   P
Sbjct: 186 IDPNNNVIQAMILVPTRELALQTSQVCKELSKYL-NIQVMVTTGGTSLR--DDIMRLHQP 245

Query: 168 -HIVVGTPGRILALSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 227
            H++VGTPGRIL L++     LK+    ++DE DK+L S + +  ++E+ +  P ++Q +
Sbjct: 246 VHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLL-SAEFQPSLEELIQFLPQNRQFL 305

Query: 228 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDAL 287
           MFSAT    ++    + ++ P  I + D+  LTL G+ Q+Y  + E +K   LN L   L
Sbjct: 306 MFSATFPVTVKAFKDRHLRKPYVINLMDQ--LTLMGVTQYYAFVEERQKVHCLNTLFSKL 365

Query: 288 DFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATD 347
             NQ +IF  SV+R   L K + E  +    IH+ M Q+ R   +  F+ G  R LV TD
Sbjct: 366 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTD 425

Query: 348 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQE 407
           L  RGIDI+ VN+VIN+D P ++++YLHRVGR+GRFG  GLA+  V +  D   +   ++
Sbjct: 426 LFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLV-TYEDRFKMYQTEQ 485

Query: 408 RFEVDIKELPEQIDTSTY 425
               +IK +P  ID + Y
Sbjct: 486 ELGTEIKPIPSNIDQAIY 496

[Close]

BLAST of Carg09332 vs. Swiss-Prot
Match: sp|Q56XG6|RH15_ARATH (DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana OX=3702 GN=RH15 PE=1 SV=3)

HSP 1 Score: 801.6 bits (2069), Expect = 4.3e-231
Identity = 404/428 (94.39%), Postives = 416/428 (97.20%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTYMPS 428
           DTSTYMPS
Sbjct: 421 DTSTYMPS 427

[Close]

BLAST of Carg09332 vs. Swiss-Prot
Match: sp|Q9LFN6|RH56_ARATH (DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana OX=3702 GN=RH56 PE=1 SV=2)

HSP 1 Score: 801.6 bits (2069), Expect = 4.3e-231
Identity = 404/428 (94.39%), Postives = 416/428 (97.20%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTYMPS 428
           DTSTYMPS
Sbjct: 421 DTSTYMPS 427

[Close]

BLAST of Carg09332 vs. Swiss-Prot
Match: sp|Q5JK84|RH15_ORYSJ (DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=AIP2 PE=1 SV=1)

HSP 1 Score: 763.8 bits (1971), Expect = 9.9e-220
Identity = 386/428 (90.19%), Postives = 402/428 (93.93%), Query Frame = 0


Query: 3   ETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAG--KKGYVGIHSSGFRDFLLKPELLR 62
           E +DNE YEE+L+DYEEE E   D   A  N  A   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGADGGAAAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 63  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 122
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQIDPVAGQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 123 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 182
           LCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CPHIVVGTPGRILA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 183 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 242
           L+R+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 185 LAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 244

Query: 243 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 302
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 245 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 304

Query: 303 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 362
           RAAEL+KLL ECNFP+I IHSGM+QEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 305 RAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 364

Query: 363 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 422
           VINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 365 VINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 424

Query: 423 DTSTYMPS 428
           DTSTYMPS
Sbjct: 425 DTSTYMPS 432

[Close]

BLAST of Carg09332 vs. Swiss-Prot
Match: sp|Q0JM17|RH56_ORYSJ (DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica OX=39947 GN=AIP1 PE=1 SV=2)

HSP 1 Score: 761.5 bits (1965), Expect = 4.9e-219
Identity = 385/428 (89.95%), Postives = 401/428 (93.69%), Query Frame = 0


Query: 3   ETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAG--KKGYVGIHSSGFRDFLLKPELLR 62
           E +DNE YEE+L+DYEEE E   D      N  A   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGTDGGANAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 63  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 122
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQIDPVAGQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 123 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 182
           LCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CPHIVVGTPGRILA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 183 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 242
           L+R+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 185 LAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 244

Query: 243 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 302
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 245 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 304

Query: 303 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 362
           RAAEL+KLL ECNFP+I IHSGM+QEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 305 RAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 364

Query: 363 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 422
           VINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 365 VINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 424

Query: 423 DTSTYMPS 428
           DTSTYMPS
Sbjct: 425 DTSTYMPS 432

[Close]

BLAST of Carg09332 vs. Swiss-Prot
Match: sp|Q5WR10|DX39B_CANLF (Spliceosome RNA helicase DDX39B OS=Canis lupus familiaris OX=9615 GN=DDX39B PE=3 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 5.5e-178
Identity = 309/422 (73.22%), Postives = 365/422 (86.49%), Query Frame = 0


Query: 6   DNEYEEELLDYEEEE-EKAPDSVGAKVNGEAGKKG-YVGIHSSGFRDFLLKPELLRAIVD 65
           +N+ + ELLDYEE+E E A    G++   +   KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3   ENDVDNELLDYEEDEVETAAGGDGSEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62

Query: 66  SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHT 125
            GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ++PV GQVS LV+CHT
Sbjct: 63  CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHT 122

Query: 126 RELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALSRD 185
           RELA+QI  E+ERFS Y+P++KVAVF+GG++IK  +++LK  CPHIVVGTPGRILAL+R+
Sbjct: 123 RELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN 182

Query: 186 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 245
           K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKF 242

Query: 246 MQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 305
           MQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R   
Sbjct: 243 MQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIA 302

Query: 306 LDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINY 365
           L +LLVE NFP+I IH GM QEERL+RY+ FK+  +RILVAT+L GRG+DIERVNI  NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362

Query: 366 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTST 425
           DMP+ +DTYLHRV RAGRFGTKGLAITFVS   D+ +LN+VQ+RFEV+I ELP++ID S+
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISS 422

[Close]

BLAST of Carg09332 vs. TrEMBL
Match: tr|A0A1S3BC35|A0A1S3BC35_CUCME (DEAD-box ATP-dependent RNA helicase 56 OS=Cucumis melo OX=3656 GN=LOC103488306 PE=4 SV=1)

HSP 1 Score: 850.9 bits (2197), Expect = 1.2e-243
Identity = 426/427 (99.77%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of Carg09332 vs. TrEMBL
Match: tr|A0A0A0LSH7|A0A0A0LSH7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381720 PE=4 SV=1)

HSP 1 Score: 850.9 bits (2197), Expect = 1.2e-243
Identity = 426/427 (99.77%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of Carg09332 vs. TrEMBL
Match: tr|A0A2G9HVQ4|A0A2G9HVQ4_9LAMI (ATP-dependent RNA helicase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05684 PE=4 SV=1)

HSP 1 Score: 826.2 bits (2133), Expect = 3.3e-236
Identity = 411/428 (96.03%), Postives = 426/428 (99.53%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MGET++N+ YEEELLDYEEEEEKAPDSVGAKVNGE+GKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETKENDAYEEELLDYEEEEEKAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+PVAGQV+ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIKIHK+LLKNECPHIVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKELLKNECPHIVVGTPGRILA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+RDKDLSL+NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLSLRNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL+E+EKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTELEKNRKLNDLLDALDFNQVVIFVKSVN 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTYMPS 428
           DTSTYMPS
Sbjct: 421 DTSTYMPS 428

[Close]

BLAST of Carg09332 vs. TrEMBL
Match: tr|A0A1U8PGN2|A0A1U8PGN2_GOSHI (DEAD-box ATP-dependent RNA helicase 56-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107958960 PE=4 SV=1)

HSP 1 Score: 824.7 bits (2129), Expect = 9.5e-236
Identity = 413/428 (96.50%), Postives = 421/428 (98.36%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MGETRDN+ YEEELLDYEEEEEKAPDSV AKVNGE GKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGEGGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQV ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVIALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIK+HKDLLKNECPHIVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVN 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTYMPS 428
           DTSTYMPS
Sbjct: 421 DTSTYMPS 428

[Close]

BLAST of Carg09332 vs. TrEMBL
Match: tr|A0A0D2TEF2|A0A0D2TEF2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G057600 PE=4 SV=1)

HSP 1 Score: 824.7 bits (2129), Expect = 9.5e-236
Identity = 413/428 (96.50%), Postives = 421/428 (98.36%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MGETRDN+ YEEELLDYEEEEEKAPDSV AKVNGE GKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGEGGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQV ALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVIALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIK+HKDLLKNECPHIVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVN 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTYMPS 428
           DTSTYMPS
Sbjct: 421 DTSTYMPS 428

The following BLAST results are available for this feature:

BLAST of Carg09332 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961952.1	8.4e-244	100.00	DEAD-box ATP-dependent RNA helicase 56 [Cucurbita moschata] >XP_022961953.1 DEAD...	[more]
XP_008445205.1	1.9e-243	99.77	PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis melo] >XP_008445206.1...	[more]
XP_022951402.1	1.9e-243	99.77	DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita moschata] >XP_022951403.1...	[more]
XP_022996719.1	2.5e-243	99.77	DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita maxima] >XP_022996720.1 D...	[more]
PIN21605.1	5.0e-236	96.03	ATP-dependent RNA helicase [Handroanthus impetiginosus]	[more]

BLAST of Carg09332 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11170.1	2.4e-232	94.39	DEAD/DEAH box RNA helicase family protein	[more]
AT5G11200.2	3.1e-224	82.96	DEAD/DEAH box RNA helicase family protein	[more]
AT2G45810.1	8.0e-71	38.89	DEA(D/H)-box RNA helicase family protein	[more]
AT4G00660.2	6.8e-70	39.15	RNAhelicase-like 8	[more]
AT3G61240.1	2.6e-69	38.36	DEA(D/H)-box RNA helicase family protein	[more]

BLAST of Carg09332 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q56XG6\|RH15_ARATH	4.3e-231	94.39	DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana OX=3702 GN=RH15 P...	[more]
sp\|Q9LFN6\|RH56_ARATH	4.3e-231	94.39	DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana OX=3702 GN=RH56 P...	[more]
sp\|Q5JK84\|RH15_ORYSJ	9.9e-220	90.19	DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
sp\|Q0JM17\|RH56_ORYSJ	4.9e-219	89.95	DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
sp\|Q5WR10\|DX39B_CANLF	5.5e-178	73.22	Spliceosome RNA helicase DDX39B OS=Canis lupus familiaris OX=9615 GN=DDX39B PE=3...	[more]

BLAST of Carg09332 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BC35\|A0A1S3BC35_CUCME	1.2e-243	99.77	DEAD-box ATP-dependent RNA helicase 56 OS=Cucumis melo OX=3656 GN=LOC103488306 P...	[more]
tr\|A0A0A0LSH7\|A0A0A0LSH7_CUCSA	1.2e-243	99.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381720 PE=4 SV=1	[more]
tr\|A0A2G9HVQ4\|A0A2G9HVQ4_9LAMI	3.3e-236	96.03	ATP-dependent RNA helicase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_0568...	[more]
tr\|A0A1U8PGN2\|A0A1U8PGN2_GOSHI	9.5e-236	96.50	DEAD-box ATP-dependent RNA helicase 56-like isoform X1 OS=Gossypium hirsutum OX=...	[more]
tr\|A0A0D2TEF2\|A0A0D2TEF2_GOSRA	9.5e-236	96.50	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G057600 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR014014	RNA_helicase_DEAD_Q_motif
IPR011545	DEAD/DEAH_box_helicase_dom
IPR001650	Helicase_C
IPR014001	Helicase_ATP-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09332-RA	Carg09332-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 65..266 e-value: 1.8E-53 score: 193.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 77..250 score: 25.857
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 302..383 e-value: 1.3E-30 score: 117.7
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 276..383 e-value: 2.3E-27 score: 95.4
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 278..423 score: 22.659
IPR001650	Helicase, C-terminal	CDD	cd00079	HELICc	coord: 264..391 e-value: 1.29308E-37 score: 133.132
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 37..252 e-value: 6.4E-65 score: 220.3
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 264..427 e-value: 2.2E-52 score: 178.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 2..427
None	No IPR available	PANTHER	PTHR24031:SF530	SUBFAMILY NOT NAMED	coord: 2..427
None	No IPR available	CDD	cd00268	DEADc	coord: 48..250 e-value: 1.15459E-85 score: 262.036
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 71..236 e-value: 7.7E-38 score: 129.9
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 46..74 score: 9.665
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 115..394

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09332	Cla022322	Watermelon (97103) v1	carwmB0133
Carg09332	Csa2G381720	Cucumber (Chinese Long) v2	carcuB0150
Carg09332	MELO3C011256	Melon (DHL92) v3.5.1	carmeB0143
Carg09332	ClCG08G013310	Watermelon (Charleston Gray)	carwcgB0137
Carg09332	CSPI02G23480	Wild cucumber (PI 183967)	carcpiB0155
Carg09332	Cucsa.162420	Cucumber (Gy14) v1	carcgyB0171
Carg09332	CmaCh05G003860	Cucurbita maxima (Rimu)	carcmaB0189
Carg09332	CmaCh12G003360	Cucurbita maxima (Rimu)	carcmaB0183
Carg09332	CmoCh05G003860	Cucurbita moschata (Rifu)	carcmoB0196
Carg09332	CmoCh12G002850	Cucurbita moschata (Rifu)	carcmoB0192
Carg09332	Lsi08G012010	Bottle gourd (USVL1VR-Ls)	carlsiB128
Carg09332	Cp4.1LG11g03160	Cucurbita pepo (Zucchini)	carcpeB0199
Carg09332	Cp4.1LG07g02940	Cucurbita pepo (Zucchini)	carcpeB0205
Carg09332	CsGy2G023240	Cucumber (Gy14) v2	carcgybB0148
Carg09332	MELO3C011256.2	Melon (DHL92) v3.6.1	carmedB0147
Carg09332	CsaV3_2G032030	Cucumber (Chinese Long) v3	carcucB0159
Carg09332	Cla97C08G156690	Watermelon (97103) v2	carwmbB0149
Carg09332	Bhi04G000786	Wax gourd	carwgoB0176

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg09332	Carg03924	Silver-seed gourd	carcarB168

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09332	Cucumber (Chinese Long) v2	carcuB0155
Carg09332	Cucumber (Chinese Long) v3	carcucB0163
Carg09332	Bottle gourd (USVL1VR-Ls)	carlsiB126
Carg09332	Melon (DHL92) v3.5.1	carmeB0145
Carg09332	Melon (DHL92) v3.6.1	carmedB0149
Carg09332	Watermelon (Charleston Gray)	carwcgB0135
Carg09332	Watermelon (Charleston Gray)	carwcgB0136
Carg09332	Watermelon (97103) v1	carwmB0136
Carg09332	Watermelon (97103) v2	carwmbB0148
Carg09332	Wax gourd	carwgoB0182
Carg09332	Silver-seed gourd	carcarB163
Carg09332	Silver-seed gourd	carcarB165
Carg09332	Cucumber (Gy14) v2	carcgybB0153
Carg09332	Cucurbita maxima (Rimu)	carcmaB0182
Carg09332	Cucumber (Gy14) v1	carcgyB0174
Carg09332	Cucurbita maxima (Rimu)	carcmaB0186
Carg09332	Cucurbita moschata (Rifu)	carcmoB0191
Carg09332	Cucurbita pepo (Zucchini)	carcpeB0203
Carg09332	Cucurbita pepo (Zucchini)	carcpeB0204
Carg09332	Wild cucumber (PI 183967)	carcpiB0160