CmaCh04G030280 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G030280
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ethylene-responsive transcription factor 2
Location	Cma_Chr04 : 19770965 .. 19771423 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTAATTCCAACACTAGTCCTCCTGAGACAAAGAAATACAAGGGCGTACGACGGCGTAAGTGGGGGAAGTGGGTGTCAGAGATTCGAGTTCCGGGCACACAAGAGCGCATGTGGCTTGGTTCTTACTCGTCGCCGGAGGCTGCCGCCGTGGCTCACGACGTGGCATATTATTGCCTGAGAAGACCCTCAAACCTCAACCACCTCAACTTCCCGCCCATGGTGCTGCCCTTGACCAATCACCTCCTTATCCGAGACGACATGTCGCCTGGCTCCATTCAGAAGGCAGCCTCCGACGCTGCCATGGCCGTCGATGCGCAGTATATATGTAACAGCTCGCCTGATCGGGGCAGCAGCGGCGGGACAGGGGCATTTCACGGATCAGGATACGAGAGCTATACTGCGATGCATGATGAAGATCGAGATCCAGATATTTCCATCGAAGATTATCTGTGA

mRNA sequence

ATGGCTTCTAATTCCAACACTAGTCCTCCTGAGACAAAGAAATACAAGGGCGTACGACGGCGTAAGTGGGGGAAGTGGGTGTCAGAGATTCGAGTTCCGGGCACACAAGAGCGCATGTGGCTTGGTTCTTACTCGTCGCCGGAGGCTGCCGCCGTGGCTCACGACGTGGCATATTATTGCCTGAGAAGACCCTCAAACCTCAACCACCTCAACTTCCCGCCCATGGTGCTGCCCTTGACCAATCACCTCCTTATCCGAGACGACATGTCGCCTGGCTCCATTCAGAAGGCAGCCTCCGACGCTGCCATGGCCGTCGATGCGCAGTATATATGTAACAGCTCGCCTGATCGGGGCAGCAGCGGCGGGACAGGGGCATTTCACGGATCAGGATACGAGAGCTATACTGCGATGCATGATGAAGATCGAGATCCAGATATTTCCATCGAAGATTATCTGTGA

Coding sequence (CDS)

ATGGCTTCTAATTCCAACACTAGTCCTCCTGAGACAAAGAAATACAAGGGCGTACGACGGCGTAAGTGGGGGAAGTGGGTGTCAGAGATTCGAGTTCCGGGCACACAAGAGCGCATGTGGCTTGGTTCTTACTCGTCGCCGGAGGCTGCCGCCGTGGCTCACGACGTGGCATATTATTGCCTGAGAAGACCCTCAAACCTCAACCACCTCAACTTCCCGCCCATGGTGCTGCCCTTGACCAATCACCTCCTTATCCGAGACGACATGTCGCCTGGCTCCATTCAGAAGGCAGCCTCCGACGCTGCCATGGCCGTCGATGCGCAGTATATATGTAACAGCTCGCCTGATCGGGGCAGCAGCGGCGGGACAGGGGCATTTCACGGATCAGGATACGAGAGCTATACTGCGATGCATGATGAAGATCGAGATCCAGATATTTCCATCGAAGATTATCTGTGA

Protein sequence

MASNSNTSPPETKKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYCLRRPSNLNHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRGSSGGTGAFHGSGYESYTAMHDEDRDPDISIEDYL

Homology

[Close]

BLAST of CmaCh04G030280 vs. Swiss-Prot
Match: ERF20_ARATH (Ethylene-responsive transcription factor ERF020 OS=Arabidopsis thaliana GN=ERF020 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-29
Identity = 78/152 (51.32%), Postives = 98/152 (64.47%), Query Frame = 1


Query: 6   NTSPPETKKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYCLRRPS 65
           +T   +  KYKG+RRRKWGKWVSEIRVPGT++R+WLGS+S+ E AAVAHDVA+YCL RPS
Sbjct: 5   DTGETDQSKYKGIRRRKWGKWVSEIRVPGTRQRLWLGSFSTAEGAAVAHDVAFYCLHRPS 64

Query: 66  NLN--HLNFPPMVLPLTNHLL---IRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRGSS 125
           +L+    NFP        HLL   +  ++SP SIQKAASDA MAVDA +        G+ 
Sbjct: 65  SLDDESFNFP--------HLLTTSLASNISPKSIQKAASDAGMAVDAGF-------HGAV 124

Query: 126 GGTGAFHGSGYESYTAMHDEDRDPDISIEDYL 153
            G+G   G    S  A  +E+    IS+ DYL
Sbjct: 125 SGSG---GCEERSSMANMEEEDKLSISVYDYL 138

[Close]

BLAST of CmaCh04G030280 vs. Swiss-Prot
Match: ERF19_ARATH (Ethylene-responsive transcription factor ERF019 OS=Arabidopsis thaliana GN=ERF019 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.8e-28
Identity = 71/139 (51.08%), Postives = 97/139 (69.78%), Query Frame = 1


Query: 14  KYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYCLRRPSNLNHLNFP 73
           KYKG+RRRKWGKWVSEIRVPGT++R+WLGS+S+ E AAVAHDVA++CL +P +L  LNFP
Sbjct: 13  KYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFSTAEGAAVAHDVAFFCLHQPDSLESLNFP 72

Query: 74  PMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRGSSGGTGAFHGSGYES 133
            ++ P    L+ R   SP SIQ+AAS+A MA+DA  + ++S + G  G T  ++ +G   
Sbjct: 73  HLLNP---SLVSRT--SPRSIQQAASNAGMAIDAGIVHSTSVNSG-CGDTTTYYENG--- 132

Query: 134 YTAMHDEDRDPDISIEDYL 153
                D+    +IS+ DYL
Sbjct: 133 ----ADQVEPLNISVYDYL 138

[Close]

BLAST of CmaCh04G030280 vs. Swiss-Prot
Match: ERF14_ARATH (Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana GN=ERF014 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.9e-18
Identity = 61/153 (39.87%), Postives = 86/153 (56.21%), Query Frame = 1


Query: 2   ASNSNTSPPETKKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYCL 61
           +S++++S    KKYKGVR R WG WVSEIR P  + R+WLGSYS+ EAAA A+D A  CL
Sbjct: 22  SSSTSSSSIRMKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCL 81

Query: 62  RRPSNLNHLNFPPM---VLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRG 121
            + S+ N+LNFP +   +  + N+    +DMSP SIQ+ A+ AA A       N+ P   
Sbjct: 82  -KGSSANNLNFPEISTSLYHIINNGDNNNDMSPKSIQRVAAAAAAA-------NTDPSSS 141

Query: 122 SSGGTGAFHGSGYES-YTAMHDEDRDPDISIED 151
           S   +     S  E  Y  +     D  +S+ +
Sbjct: 142 SVSTSSPLLSSPSEDLYDVVSMSQYDQQVSLSE 166

[Close]

BLAST of CmaCh04G030280 vs. Swiss-Prot
Match: ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-17
Identity = 50/107 (46.73%), Postives = 68/107 (63.55%), Query Frame = 1


Query: 5   SNTSPPETKK----YKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYC 64
           ++ + P T+K    YKG+R RKWGKWV+EIR P  + R+WLGSYS+PEAAA A+D A + 
Sbjct: 7   ADVAVPGTRKRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFY 66

Query: 65  LRRPSNLNHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDA 108
           LR P+    LNFP +   L       +DMS  +I+K A++    VDA
Sbjct: 67  LRGPT--ARLNFPEL---LPGEKFSDEDMSAATIRKKATEVGAQVDA 108

[Close]

BLAST of CmaCh04G030280 vs. Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.9e-17
Identity = 48/95 (50.53%), Postives = 65/95 (68.42%), Query Frame = 1


Query: 13  KKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYCLRRPSNLNHLNF 72
           + +KG+R RKWGKWV+EIR P  + R+WLGSYS+PEAAA A+D A + LR P+    LNF
Sbjct: 19  RPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTAT--LNF 78

Query: 73  PPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDA 108
           P + LP T+     +DMS  +I+K A++    VDA
Sbjct: 79  PEL-LPCTS----AEDMSAATIRKKATEVGAQVDA 106

[Close]

BLAST of CmaCh04G030280 vs. TrEMBL
Match: A0A0A0LPY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401240 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 7.9e-62
Identity = 122/152 (80.26%), Postives = 137/152 (90.13%), Query Frame = 1


Query: 1   MASNSNTSPPETKKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYC 60
           MAS+SN SP ETKK+KGVR+RKWGKWVSEIR+PG+Q+R+WLGSYSSPEAAAVAHDVAYYC
Sbjct: 1   MASSSN-SPGETKKFKGVRQRKWGKWVSEIRIPGSQDRLWLGSYSSPEAAAVAHDVAYYC 60

Query: 61  LRRPSNLNHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRGSS 120
           LRRPSNL+HLNFPPMVLPLTNHLLIRDDMSPGSIQ+AASDAAMAVDAQYICNS  DRGSS
Sbjct: 61  LRRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQRAASDAAMAVDAQYICNSLGDRGSS 120

Query: 121 GGTGAFHGSGYESYTAMHDEDRDPDISIEDYL 153
           G  GAF  SG E Y+ +++   D D+SI+DYL
Sbjct: 121 GRAGAFQASGDEQYSGLNN---DQDLSIQDYL 148

[Close]

BLAST of CmaCh04G030280 vs. TrEMBL
Match: M5XPN8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020605mg PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-36
Identity = 94/166 (56.63%), Postives = 108/166 (65.06%), Query Frame = 1


Query: 2   ASNSNTSPPET--KKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYY 61
           +S  ++S P T  +K+KGVR+RKWGKWVSEIRVPGTQ+R+WLGS+SSPEAAAVA DVAYY
Sbjct: 4   SSEESSSSPGTGQRKFKGVRQRKWGKWVSEIRVPGTQDRLWLGSFSSPEAAAVARDVAYY 63

Query: 62  CLRRPSNLNHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRGS 121
           CLRRPS L  LNF P+VLP + H     DMSP SIQKAASDA MAVDAQ + N SP  G 
Sbjct: 64  CLRRPSTLEGLNF-PLVLPSSVHA----DMSPRSIQKAASDAGMAVDAQLVANRSPQAGG 123

Query: 122 SGGTGAFHGSGYESYTAMHDEDR--------------DPDISIEDY 152
                  HG   E +  M +  R              D  ISIEDY
Sbjct: 124 RQSNNGSHGVESEVWEDMGESSRTNCGGHMGFGSGCEDLSISIEDY 164

[Close]

BLAST of CmaCh04G030280 vs. TrEMBL
Match: A0A067LJD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01235 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.8e-35
Identity = 94/179 (52.51%), Postives = 111/179 (62.01%), Query Frame = 1


Query: 1   MASNSNTSPPETKKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYC 60
           M+ +  T+  ET KYKGVRRRKWGKWVSEIRVPGTQ R+WLGSYSSPEAAAVAHD+A YC
Sbjct: 1   MSGSRTTTTAETAKYKGVRRRKWGKWVSEIRVPGTQGRLWLGSYSSPEAAAVAHDIASYC 60

Query: 61  LRRPSNLNHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICN---SSP-- 120
           LR  S+++ LNFP ++LP +    +R D+SP SIQKAASDA MAVDAQ I N   SS   
Sbjct: 61  LRGHSSIDSLNFPDLMLPAS----VRGDISPTSIQKAASDAGMAVDAQMIMNRVGSSDNE 120

Query: 121 -----------------------DRGSSGGTGAFHGSGYESYTAMHDEDRDPDISIEDY 152
                                  D G  GG G + GSG +S     D     +IS+EDY
Sbjct: 121 VNGNEGSGNGAVLGSETEQLEWGDVGGDGGRGNWSGSGSQS----RDSGDSLNISVEDY 171

[Close]

BLAST of CmaCh04G030280 vs. TrEMBL
Match: A0A068ER16_DIOKA (Ethylene response factor 13 OS=Diospyros kaki GN=ERF13 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.3e-35
Identity = 86/152 (56.58%), Postives = 101/152 (66.45%), Query Frame = 1


Query: 3   SNSNTSPPETKKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYCLR 62
           S S+T+   TK Y+GVRRRKWGKWVSEIRVPGTQER+WLGSYS+PEAAAVAHD+A YCLR
Sbjct: 8   SGSSTTADPTKSYRGVRRRKWGKWVSEIRVPGTQERLWLGSYSTPEAAAVAHDIASYCLR 67

Query: 63  RPSNLNHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSS--PDRGSS 122
            P++L  LNF     PLT     R  MSP S+QKAASDA MAVDAQ+    S    R   
Sbjct: 68  GPASLQKLNF-----PLTLPAGARPGMSPKSVQKAASDAGMAVDAQFAMKQSNGSARNDQ 127

Query: 123 GGTGAFHGSGYESYTAMHDEDRDPDISIEDYL 153
            G      + Y   +A   +  D +IS+EDYL
Sbjct: 128 VGVAEQSSADYHLQSASRSQGEDLNISVEDYL 154

[Close]

BLAST of CmaCh04G030280 vs. TrEMBL
Match: A9PL99_POPTR (RAP2-like protein OS=Populus trichocarpa GN=RAP2L9 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-34
Identity = 89/158 (56.33%), Postives = 108/158 (68.35%), Query Frame = 1


Query: 13  KKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYCLRRPSNLNHLNF 72
           KK+KGVRRRKWGKWVSEIR+PG Q+R+WLGSYS+PEAAAVAHD+A YCLR PS++  LNF
Sbjct: 20  KKFKGVRRRKWGKWVSEIRIPGKQDRLWLGSYSTPEAAAVAHDIASYCLRGPSSIESLNF 79

Query: 73  PPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDR-----GSSGG----- 132
            P++LP +    +R+DMSP SIQKAASDA MA+DAQ I N  P+       +SGG     
Sbjct: 80  -PLMLPAS----VREDMSPKSIQKAASDAGMAIDAQMILNRVPENEVKFWTASGGVNHGL 139

Query: 133 -------TGAFHGSGYE-SYTAMHDEDRDPDISIEDYL 153
                   G  HG  +  + T M    R+ DISIEDYL
Sbjct: 140 EIELCEPAGGDHGGNWHGNNTGM----REGDISIEDYL 168

[Close]

BLAST of CmaCh04G030280 vs. TAIR10
Match: AT1G71520.1 (AT1G71520.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 130.6 bits (327), Expect = 8.4e-31
Identity = 78/152 (51.32%), Postives = 98/152 (64.47%), Query Frame = 1


Query: 6   NTSPPETKKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYCLRRPS 65
           +T   +  KYKG+RRRKWGKWVSEIRVPGT++R+WLGS+S+ E AAVAHDVA+YCL RPS
Sbjct: 5   DTGETDQSKYKGIRRRKWGKWVSEIRVPGTRQRLWLGSFSTAEGAAVAHDVAFYCLHRPS 64

Query: 66  NLN--HLNFPPMVLPLTNHLL---IRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRGSS 125
           +L+    NFP        HLL   +  ++SP SIQKAASDA MAVDA +        G+ 
Sbjct: 65  SLDDESFNFP--------HLLTTSLASNISPKSIQKAASDAGMAVDAGF-------HGAV 124

Query: 126 GGTGAFHGSGYESYTAMHDEDRDPDISIEDYL 153
            G+G   G    S  A  +E+    IS+ DYL
Sbjct: 125 SGSG---GCEERSSMANMEEEDKLSISVYDYL 138

[Close]

BLAST of CmaCh04G030280 vs. TAIR10
Match: AT1G22810.1 (AT1G22810.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 126.3 bits (316), Expect = 1.6e-29
Identity = 71/139 (51.08%), Postives = 97/139 (69.78%), Query Frame = 1


Query: 14  KYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYCLRRPSNLNHLNFP 73
           KYKG+RRRKWGKWVSEIRVPGT++R+WLGS+S+ E AAVAHDVA++CL +P +L  LNFP
Sbjct: 13  KYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFSTAEGAAVAHDVAFFCLHQPDSLESLNFP 72

Query: 74  PMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRGSSGGTGAFHGSGYES 133
            ++ P    L+ R   SP SIQ+AAS+A MA+DA  + ++S + G  G T  ++ +G   
Sbjct: 73  HLLNP---SLVSRT--SPRSIQQAASNAGMAIDAGIVHSTSVNSG-CGDTTTYYENG--- 132

Query: 134 YTAMHDEDRDPDISIEDYL 153
                D+    +IS+ DYL
Sbjct: 133 ----ADQVEPLNISVYDYL 138

[Close]

BLAST of CmaCh04G030280 vs. TAIR10
Match: AT1G44830.1 (AT1G44830.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 3.3e-19
Identity = 61/153 (39.87%), Postives = 86/153 (56.21%), Query Frame = 1


Query: 2   ASNSNTSPPETKKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYCL 61
           +S++++S    KKYKGVR R WG WVSEIR P  + R+WLGSYS+ EAAA A+D A  CL
Sbjct: 22  SSSTSSSSIRMKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCL 81

Query: 62  RRPSNLNHLNFPPM---VLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRG 121
            + S+ N+LNFP +   +  + N+    +DMSP SIQ+ A+ AA A       N+ P   
Sbjct: 82  -KGSSANNLNFPEISTSLYHIINNGDNNNDMSPKSIQRVAAAAAAA-------NTDPSSS 141

Query: 122 SSGGTGAFHGSGYES-YTAMHDEDRDPDISIED 151
           S   +     S  E  Y  +     D  +S+ +
Sbjct: 142 SVSTSSPLLSSPSEDLYDVVSMSQYDQQVSLSE 166

[Close]

BLAST of CmaCh04G030280 vs. TAIR10
Match: AT5G67190.1 (AT5G67190.1 DREB and EAR motif protein 2)

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-18
Identity = 50/107 (46.73%), Postives = 68/107 (63.55%), Query Frame = 1


Query: 5   SNTSPPETKK----YKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYC 64
           ++ + P T+K    YKG+R RKWGKWV+EIR P  + R+WLGSYS+PEAAA A+D A + 
Sbjct: 7   ADVAVPGTRKRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFY 66

Query: 65  LRRPSNLNHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDA 108
           LR P+    LNFP +   L       +DMS  +I+K A++    VDA
Sbjct: 67  LRGPT--ARLNFPEL---LPGEKFSDEDMSAATIRKKATEVGAQVDA 108

[Close]

BLAST of CmaCh04G030280 vs. TAIR10
Match: AT3G50260.1 (AT3G50260.1 cooperatively regulated by ethylene and jasmonate 1)

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-18
Identity = 48/95 (50.53%), Postives = 65/95 (68.42%), Query Frame = 1


Query: 13  KKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYCLRRPSNLNHLNF 72
           + +KG+R RKWGKWV+EIR P  + R+WLGSYS+PEAAA A+D A + LR P+    LNF
Sbjct: 19  RPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTAT--LNF 78

Query: 73  PPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDA 108
           P + LP T+     +DMS  +I+K A++    VDA
Sbjct: 79  PEL-LPCTS----AEDMSAATIRKKATEVGAQVDA 106

[Close]

BLAST of CmaCh04G030280 vs. NCBI nr
Match: gi|449442118|ref|XP_004138829.1| (PREDICTED: ethylene-responsive transcription factor ERF020 [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 1.1e-61
Identity = 122/152 (80.26%), Postives = 137/152 (90.13%), Query Frame = 1


Query: 1   MASNSNTSPPETKKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYC 60
           MAS+SN SP ETKK+KGVR+RKWGKWVSEIR+PG+Q+R+WLGSYSSPEAAAVAHDVAYYC
Sbjct: 1   MASSSN-SPGETKKFKGVRQRKWGKWVSEIRIPGSQDRLWLGSYSSPEAAAVAHDVAYYC 60

Query: 61  LRRPSNLNHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRGSS 120
           LRRPSNL+HLNFPPMVLPLTNHLLIRDDMSPGSIQ+AASDAAMAVDAQYICNS  DRGSS
Sbjct: 61  LRRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQRAASDAAMAVDAQYICNSLGDRGSS 120

Query: 121 GGTGAFHGSGYESYTAMHDEDRDPDISIEDYL 153
           G  GAF  SG E Y+ +++   D D+SI+DYL
Sbjct: 121 GRAGAFQASGDEQYSGLNN---DQDLSIQDYL 148

[Close]

BLAST of CmaCh04G030280 vs. NCBI nr
Match: gi|659081116|ref|XP_008441160.1| (PREDICTED: ethylene-responsive transcription factor ERF019 [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 2.1e-60
Identity = 122/152 (80.26%), Postives = 135/152 (88.82%), Query Frame = 1


Query: 1   MASNSNTSPPETKKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYC 60
           MAS+SN S  E KK+KGVR+RKWGKWVSEIRVPG+Q+R+WLGSYSSPEAAAVAHDVAYYC
Sbjct: 1   MASSSN-SLGEIKKFKGVRQRKWGKWVSEIRVPGSQDRLWLGSYSSPEAAAVAHDVAYYC 60

Query: 61  LRRPSNLNHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRGSS 120
           LRRPSNL+HLNFPPMVLPLTNHLLIRDDMSPGSIQ+AASDAAMAVDAQYICNS  DRGSS
Sbjct: 61  LRRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQRAASDAAMAVDAQYICNSLADRGSS 120

Query: 121 GGTGAFHGSGYESYTAMHDEDRDPDISIEDYL 153
           G  GAF  SG + YTA ++   D D+SI+DYL
Sbjct: 121 GRAGAFQASGDDQYTAFNN---DQDLSIQDYL 148

[Close]

BLAST of CmaCh04G030280 vs. NCBI nr
Match: gi|596293600|ref|XP_007226695.1| (hypothetical protein PRUPE_ppa020605mg [Prunus persica])

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-36
Identity = 94/166 (56.63%), Postives = 108/166 (65.06%), Query Frame = 1


Query: 2   ASNSNTSPPET--KKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYY 61
           +S  ++S P T  +K+KGVR+RKWGKWVSEIRVPGTQ+R+WLGS+SSPEAAAVA DVAYY
Sbjct: 4   SSEESSSSPGTGQRKFKGVRQRKWGKWVSEIRVPGTQDRLWLGSFSSPEAAAVARDVAYY 63

Query: 62  CLRRPSNLNHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRGS 121
           CLRRPS L  LNF P+VLP + H     DMSP SIQKAASDA MAVDAQ + N SP  G 
Sbjct: 64  CLRRPSTLEGLNF-PLVLPSSVHA----DMSPRSIQKAASDAGMAVDAQLVANRSPQAGG 123

Query: 122 SGGTGAFHGSGYESYTAMHDEDR--------------DPDISIEDY 152
                  HG   E +  M +  R              D  ISIEDY
Sbjct: 124 RQSNNGSHGVESEVWEDMGESSRTNCGGHMGFGSGCEDLSISIEDY 164

[Close]

BLAST of CmaCh04G030280 vs. NCBI nr
Match: gi|645224404|ref|XP_008219092.1| (PREDICTED: ethylene-responsive transcription factor ERF020 [Prunus mume])

HSP 1 Score: 160.2 bits (404), Expect = 2.8e-36
Identity = 94/166 (56.63%), Postives = 108/166 (65.06%), Query Frame = 1


Query: 2   ASNSNTSPPET--KKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYY 61
           +S  ++S P T  +K+KGVR+RKWGKWVSEIRVPGTQ+R+WLGS+SSPEAAAVA DVAYY
Sbjct: 4   SSEESSSSPGTGQRKFKGVRQRKWGKWVSEIRVPGTQDRLWLGSFSSPEAAAVARDVAYY 63

Query: 62  CLRRPSNLNHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRGS 121
           CLRRPS L  LNF P+VLP + H     DMSP SIQKAASDA MAVDAQ + N SP  G 
Sbjct: 64  CLRRPSTLEGLNF-PLVLPSSVHA----DMSPRSIQKAASDAGMAVDAQLVANRSPQAGG 123

Query: 122 SGGTGAFHGSGYESYTAMHDEDR--------------DPDISIEDY 152
                  HG   E +  M +  R              D  ISIEDY
Sbjct: 124 RQSYNGSHGVESEVWEDMGESSRNNWGGHMGSGNGCEDLSISIEDY 164

[Close]

BLAST of CmaCh04G030280 vs. NCBI nr
Match: gi|802541545|ref|XP_012080229.1| (PREDICTED: ethylene-responsive transcription factor ERF020 [Jatropha curcas])

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-35
Identity = 94/173 (54.34%), Postives = 110/173 (63.58%), Query Frame = 1


Query: 2   ASNSNTSPPETKKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYCL 61
           + +  T+  ET KYKGVRRRKWGKWVSEIRVPGTQ R+WLGSYSSPEAAAVAHD+A YCL
Sbjct: 78  SGSRTTTTAETAKYKGVRRRKWGKWVSEIRVPGTQRRLWLGSYSSPEAAAVAHDIASYCL 137

Query: 62  RRPSNLNHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICN---SSP--- 121
           R  S+++ LNFP ++LP +    +R DMSP SIQKAASDA MAVDAQ I N   SS    
Sbjct: 138 RGHSSIDSLNFPDLMLPAS----VRGDMSPTSIQKAASDAGMAVDAQMIMNRVGSSDNEV 197

Query: 122 -----------------DRGSSGGTGAFHGSGYESYTAMHDEDRDPDISIEDY 152
                            D G  GG G + GSG +S     D     +IS+EDY
Sbjct: 198 NGNGAVLGSETEQLEWGDVGGDGGRGNWSGSGSQS----RDSGDSLNISVEDY 242

The following BLAST results are available for this feature:

BLAST of CmaCh04G030280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF20_ARATH	1.5e-29	51.32	Ethylene-responsive transcription factor ERF020 OS=Arabidopsis thaliana GN=ERF02...	[more]
ERF19_ARATH	2.8e-28	51.08	Ethylene-responsive transcription factor ERF019 OS=Arabidopsis thaliana GN=ERF01...	[more]
ERF14_ARATH	5.9e-18	39.87	Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana GN=ERF01...	[more]
ERF10_ARATH	2.2e-17	46.73	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF01...	[more]
ERF11_ARATH	2.9e-17	50.53	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF01...	[more]

BLAST of CmaCh04G030280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPY2_CUCSA	7.9e-62	80.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401240 PE=4 SV=1	[more]
M5XPN8_PRUPE	1.1e-36	56.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020605mg PE=4 SV=1	[more]
A0A067LJD7_JATCU	4.8e-35	52.51	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01235 PE=4 SV=1	[more]
A0A068ER16_DIOKA	6.3e-35	56.58	Ethylene response factor 13 OS=Diospyros kaki GN=ERF13 PE=2 SV=1	[more]
A9PL99_POPTR	1.1e-34	56.33	RAP2-like protein OS=Populus trichocarpa GN=RAP2L9 PE=4 SV=1	[more]

BLAST of CmaCh04G030280 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71520.1	8.4e-31	51.32	Integrase-type DNA-binding superfamily protein	[more]
AT1G22810.1	1.6e-29	51.08	Integrase-type DNA-binding superfamily protein	[more]
AT1G44830.1	3.3e-19	39.87	Integrase-type DNA-binding superfamily protein	[more]
AT5G67190.1	1.3e-18	46.73	DREB and EAR motif protein 2	[more]
AT3G50260.1	1.6e-18	50.53	cooperatively regulated by ethylene and jasmonate 1	[more]

BLAST of CmaCh04G030280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442118\|ref\|XP_004138829.1\|	1.1e-61	80.26	PREDICTED: ethylene-responsive transcription factor ERF020 [Cucumis sativus]	[more]
gi\|659081116\|ref\|XP_008441160.1\|	2.1e-60	80.26	PREDICTED: ethylene-responsive transcription factor ERF019 [Cucumis melo]	[more]
gi\|596293600\|ref\|XP_007226695.1\|	1.6e-36	56.63	hypothetical protein PRUPE_ppa020605mg [Prunus persica]	[more]
gi\|645224404\|ref\|XP_008219092.1\|	2.8e-36	56.63	PREDICTED: ethylene-responsive transcription factor ERF020 [Prunus mume]	[more]
gi\|802541545\|ref\|XP_012080229.1\|	1.8e-35	54.34	PREDICTED: ethylene-responsive transcription factor ERF020 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G030280.1	CmaCh04G030280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 15..26 score: 6.6E-8coord: 37..53 score: 6.
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 14..73 score: 1.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 14..62 score: 1.
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 14..79 score: 8.9
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 14..73 score: 21
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 14..73 score: 2.62
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 13..120 score: 3.8
None	No IPR available	PANTHER	PTHR31985:SF3	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF019-RELATED	coord: 13..120 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G030280	Cucsa.088640	Cucumber (Gy14) v1	cgycmaB0171
CmaCh04G030280	Cla011988	Watermelon (97103) v1	cmawmB741
CmaCh04G030280	Csa2G401240	Cucumber (Chinese Long) v2	cmacuB694
CmaCh04G030280	MELO3C008082	Melon (DHL92) v3.5.1	cmameB679
CmaCh04G030280	ClCG11G008870	Watermelon (Charleston Gray)	cmawcgB631
CmaCh04G030280	CSPI02G24590	Wild cucumber (PI 183967)	cmacpiB702
CmaCh04G030280	CmoCh04G031510	Cucurbita moschata (Rifu)	cmacmoB729
CmaCh04G030280	CmoCh15G000110	Cucurbita moschata (Rifu)	cmacmoB692
CmaCh04G030280	Lsi11G010150	Bottle gourd (USVL1VR-Ls)	cmalsiB637
CmaCh04G030280	Cp4.1LG13g11780	Cucurbita pepo (Zucchini)	cmacpeB705
CmaCh04G030280	Cp4.1LG01g26310	Cucurbita pepo (Zucchini)	cmacpeB721
CmaCh04G030280	MELO3C008082.2	Melon (DHL92) v3.6.1	cmamedB762
CmaCh04G030280	CsaV3_2G033120	Cucumber (Chinese Long) v3	cmacucB0827
CmaCh04G030280	Cla97C11G214880	Watermelon (97103) v2	cmawmbB731
CmaCh04G030280	Bhi04G002104	Wax gourd	cmawgoB0874
CmaCh04G030280	CsGy2G024360	Cucumber (Gy14) v2	cgybcmaB248
CmaCh04G030280	Carg06101	Silver-seed gourd	carcmaB0033

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G030280	CmaCh15G000110	Cucurbita maxima (Rimu)	cmacmaB324

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G030280	Wax gourd	cmawgoB0860
CmaCh04G030280	Watermelon (Charleston Gray)	cmawcgB620
CmaCh04G030280	Watermelon (97103) v1	cmawmB727