ClCG11G008870 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG11G008870
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Ethylene-responsive transcription factor 2
Location	CG_Chr11 : 13129677 .. 13130093 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAGTGAGACAAAGAAATACAAGGGCGTACGCCGGCGTAAGTGGGGGAAGTGGGTGTCGGAGATTCGAGTTCCGGGCAGTCAAGAGCGGCTGTGGCTAGGTTCTTACTCGTCGCCGGAGGCCGCCGCCGTGGCTCACGACGTCGCATATTATTGCCTGAGAAGACCCTCTAATCTGGACCACCTCAACTTCCCGCCGATGGTGTTGCCATTGACCAACCATCTCCTTATCCGAGACGACATGTCCCCTGGCTCCATTCAGAAGGCGGCTTCCGATGCCGCCATGGCTGTCGACGCTCAGTACATATGCAACAGCTTGGCAGACCCGGGCAGCAGAGGCCGGGCAGGGGCAGGTGATGACAACTATACGCCGCCCAACCATCAAGATCTTTCCATCCAAGATTATATGTGA

mRNA sequence

ATGGCTTCCAGTGAGACAAAGAAATACAAGGGCGTACGCCGGCGTAAGTGGGGGAAGTGGGTGTCGGAGATTCGAGTTCCGGGCAGTCAAGAGCGGCTGTGGCTAGGTTCTTACTCGTCGCCGGAGGCCGCCGCCGTGGCTCACGACGTCGCATATTATTGCCTGAGAAGACCCTCTAATCTGGACCACCTCAACTTCCCGCCGATGGTGTTGCCATTGACCAACCATCTCCTTATCCGAGACGACATGTCCCCTGGCTCCATTCAGAAGGCGGCTTCCGATGCCGCCATGGCTGTCGACGCTCAGTACATATGCAACAGCTTGGCAGACCCGGGCAGCAGAGGCCGGGCAGGGGCAGGTGATGACAACTATACGCCGCCCAACCATCAAGATCTTTCCATCCAAGATTATATGTGA

Coding sequence (CDS)

ATGGCTTCCAGTGAGACAAAGAAATACAAGGGCGTACGCCGGCGTAAGTGGGGGAAGTGGGTGTCGGAGATTCGAGTTCCGGGCAGTCAAGAGCGGCTGTGGCTAGGTTCTTACTCGTCGCCGGAGGCCGCCGCCGTGGCTCACGACGTCGCATATTATTGCCTGAGAAGACCCTCTAATCTGGACCACCTCAACTTCCCGCCGATGGTGTTGCCATTGACCAACCATCTCCTTATCCGAGACGACATGTCCCCTGGCTCCATTCAGAAGGCGGCTTCCGATGCCGCCATGGCTGTCGACGCTCAGTACATATGCAACAGCTTGGCAGACCCGGGCAGCAGAGGCCGGGCAGGGGCAGGTGATGACAACTATACGCCGCCCAACCATCAAGATCTTTCCATCCAAGATTATATGTGA

Protein sequence

MASSETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSLADPGSRGRAGAGDDNYTPPNHQDLSIQDYM

Homology

[Close]

BLAST of ClCG11G008870 vs. Swiss-Prot
Match: ERF20_ARATH (Ethylene-responsive transcription factor ERF020 OS=Arabidopsis thaliana GN=ERF020 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-29
Identity = 72/140 (51.43%), Postives = 89/140 (63.57%), Query Frame = 1


Query: 4   SETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLD- 63
           ++  KYKG+RRRKWGKWVSEIRVPG+++RLWLGS+S+ E AAVAHDVA+YCL RPS+LD 
Sbjct: 9   TDQSKYKGIRRRKWGKWVSEIRVPGTRQRLWLGSFSTAEGAAVAHDVAFYCLHRPSSLDD 68

Query: 64  -HLNFPPMVLPLTNHLL---IRDDMSPGSIQKAASDAAMAVDAQYICNSLADPGSRGRAG 123
              NFP        HLL   +  ++SP SIQKAASDA MAVDA +        G   R+ 
Sbjct: 69  ESFNFP--------HLLTTSLASNISPKSIQKAASDAGMAVDAGFHGAVSGSGGCEERSS 128

Query: 124 AGDDNYTPPNHQDLSIQDYM 139
               N    +   +S+ DY+
Sbjct: 129 MA--NMEEEDKLSISVYDYL 138

[Close]

BLAST of ClCG11G008870 vs. Swiss-Prot
Match: ERF19_ARATH (Ethylene-responsive transcription factor ERF019 OS=Arabidopsis thaliana GN=ERF019 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.5e-28
Identity = 64/131 (48.85%), Postives = 89/131 (67.94%), Query Frame = 1


Query: 8   KYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLDHLNFP 67
           KYKG+RRRKWGKWVSEIRVPG+++RLWLGS+S+ E AAVAHDVA++CL +P +L+ LNFP
Sbjct: 13  KYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFSTAEGAAVAHDVAFFCLHQPDSLESLNFP 72

Query: 68  PMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSLADPGSRGRAGAGDDNYTPP 127
            ++ P    L+ R   SP SIQ+AAS+A MA+DA  + ++  + G        ++     
Sbjct: 73  HLLNP---SLVSR--TSPRSIQQAASNAGMAIDAGIVHSTSVNSGCGDTTTYYENGADQV 132

Query: 128 NHQDLSIQDYM 139
              ++S+ DY+
Sbjct: 133 EPLNISVYDYL 138

[Close]

BLAST of ClCG11G008870 vs. Swiss-Prot
Match: ERF14_ARATH (Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana GN=ERF014 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-18
Identity = 51/100 (51.00%), Postives = 65/100 (65.00%), Query Frame = 1


Query: 2   ASSETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNL 61
           +S   KKYKGVR R WG WVSEIR P  + R+WLGSYS+ EAAA A+D A  CL + S+ 
Sbjct: 28  SSIRMKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCL-KGSSA 87

Query: 62  DHLNFPPM---VLPLTNHLLIRDDMSPGSIQKAASDAAMA 99
           ++LNFP +   +  + N+    +DMSP SIQ+ A+ AA A
Sbjct: 88  NNLNFPEISTSLYHIINNGDNNNDMSPKSIQRVAAAAAAA 126

[Close]

BLAST of ClCG11G008870 vs. Swiss-Prot
Match: ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.1e-18
Identity = 48/95 (50.53%), Postives = 60/95 (63.16%), Query Frame = 1


Query: 7   KKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLDHLNF 66
           + YKG+R RKWGKWV+EIR P  + RLWLGSYS+PEAAA A+D A + LR P+    LNF
Sbjct: 19  RPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPT--ARLNF 78

Query: 67  PPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDA 102
           P +   L       +DMS  +I+K A++    VDA
Sbjct: 79  PEL---LPGEKFSDEDMSAATIRKKATEVGAQVDA 108

[Close]

BLAST of ClCG11G008870 vs. Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.1e-18
Identity = 49/95 (51.58%), Postives = 63/95 (66.32%), Query Frame = 1


Query: 7   KKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLDHLNF 66
           + +KG+R RKWGKWV+EIR P  + RLWLGSYS+PEAAA A+D A + LR P+    LNF
Sbjct: 19  RPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTAT--LNF 78

Query: 67  PPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDA 102
           P + LP T+     +DMS  +I+K A++    VDA
Sbjct: 79  PEL-LPCTS----AEDMSAATIRKKATEVGAQVDA 106

[Close]

BLAST of ClCG11G008870 vs. TrEMBL
Match: A0A0A0LPY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401240 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.5e-61
Identity = 123/148 (83.11%), Postives = 132/148 (89.19%), Query Frame = 1


Query: 1   MASS-----ETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60
           MASS     ETKK+KGVR+RKWGKWVSEIR+PGSQ+RLWLGSYSSPEAAAVAHDVAYYCL
Sbjct: 1   MASSSNSPGETKKFKGVRQRKWGKWVSEIRIPGSQDRLWLGSYSSPEAAAVAHDVAYYCL 60

Query: 61  RRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSLADPGSRG 120
           RRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQ+AASDAAMAVDAQYICNSL D GS G
Sbjct: 61  RRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQRAASDAAMAVDAQYICNSLGDRGSSG 120

Query: 121 RAGA----GDDNYTPPNH-QDLSIQDYM 139
           RAGA    GD+ Y+  N+ QDLSIQDY+
Sbjct: 121 RAGAFQASGDEQYSGLNNDQDLSIQDYL 148

[Close]

BLAST of ClCG11G008870 vs. TrEMBL
Match: A9PL99_POPTR (RAP2-like protein OS=Populus trichocarpa GN=RAP2L9 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-35
Identity = 84/159 (52.83%), Postives = 103/159 (64.78%), Query Frame = 1


Query: 2   ASSETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNL 61
           AS+  KK+KGVRRRKWGKWVSEIR+PG Q+RLWLGSYS+PEAAAVAHD+A YCLR PS++
Sbjct: 15  ASAARKKFKGVRRRKWGKWVSEIRIPGKQDRLWLGSYSTPEAAAVAHDIASYCLRGPSSI 74

Query: 62  DHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICN--------------- 121
           + LNF P++LP +    +R+DMSP SIQKAASDA MA+DAQ I N               
Sbjct: 75  ESLNF-PLMLPAS----VREDMSPKSIQKAASDAGMAIDAQMILNRVPENEVKFWTASGG 134

Query: 122 -------SLADPGSRGRAGAGDDNYTPPNHQDLSIQDYM 139
                   L +P      G    N T     D+SI+DY+
Sbjct: 135 VNHGLEIELCEPAGGDHGGNWHGNNTGMREGDISIEDYL 168

[Close]

BLAST of ClCG11G008870 vs. TrEMBL
Match: A0A067LJD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01235 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.6e-35
Identity = 80/121 (66.12%), Postives = 95/121 (78.51%), Query Frame = 1


Query: 3   SSETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLD 62
           ++ET KYKGVRRRKWGKWVSEIRVPG+Q RLWLGSYSSPEAAAVAHD+A YCLR  S++D
Sbjct: 9   TAETAKYKGVRRRKWGKWVSEIRVPGTQGRLWLGSYSSPEAAAVAHDIASYCLRGHSSID 68

Query: 63  HLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSL--ADPGSRGRAGAG 122
            LNFP ++LP +    +R D+SP SIQKAASDA MAVDAQ I N +  +D    G  G+G
Sbjct: 69  SLNFPDLMLPAS----VRGDISPTSIQKAASDAGMAVDAQMIMNRVGSSDNEVNGNEGSG 125

[Close]

BLAST of ClCG11G008870 vs. TrEMBL
Match: M5XPN8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020605mg PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.3e-34
Identity = 77/108 (71.30%), Postives = 87/108 (80.56%), Query Frame = 1


Query: 7   KKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLDHLNF 66
           +K+KGVR+RKWGKWVSEIRVPG+Q+RLWLGS+SSPEAAAVA DVAYYCLRRPS L+ LNF
Sbjct: 17  RKFKGVRQRKWGKWVSEIRVPGTQDRLWLGSFSSPEAAAVARDVAYYCLRRPSTLEGLNF 76

Query: 67  PPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSLADPGSR 115
            P+VLP + H     DMSP SIQKAASDA MAVDAQ + N     G R
Sbjct: 77  -PLVLPSSVHA----DMSPRSIQKAASDAGMAVDAQLVANRSPQAGGR 119

[Close]

BLAST of ClCG11G008870 vs. TrEMBL
Match: A9PLA0_POPTR (RAP2-like protein OS=Populus trichocarpa GN=RAP2L10 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.3e-34
Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 1


Query: 2   ASSETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNL 61
           AS+  +K+KG RRRKWGKWVSEIR+PG QERLWLGSYS+PEAAAVAHD+A YCLR PS+L
Sbjct: 22  ASASQRKFKGARRRKWGKWVSEIRIPGKQERLWLGSYSTPEAAAVAHDIASYCLRGPSSL 81

Query: 62  DHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICN 107
           + LNF P++LP +    +R+DMSP SIQKAASDA MA+DAQ I N
Sbjct: 82  ESLNF-PLMLPAS----VREDMSPKSIQKAASDAGMAIDAQMILN 121

[Close]

BLAST of ClCG11G008870 vs. TAIR10
Match: AT1G71520.1 (AT1G71520.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 9.9e-31
Identity = 72/140 (51.43%), Postives = 89/140 (63.57%), Query Frame = 1


Query: 4   SETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLD- 63
           ++  KYKG+RRRKWGKWVSEIRVPG+++RLWLGS+S+ E AAVAHDVA+YCL RPS+LD 
Sbjct: 9   TDQSKYKGIRRRKWGKWVSEIRVPGTRQRLWLGSFSTAEGAAVAHDVAFYCLHRPSSLDD 68

Query: 64  -HLNFPPMVLPLTNHLL---IRDDMSPGSIQKAASDAAMAVDAQYICNSLADPGSRGRAG 123
              NFP        HLL   +  ++SP SIQKAASDA MAVDA +        G   R+ 
Sbjct: 69  ESFNFP--------HLLTTSLASNISPKSIQKAASDAGMAVDAGFHGAVSGSGGCEERSS 128

Query: 124 AGDDNYTPPNHQDLSIQDYM 139
               N    +   +S+ DY+
Sbjct: 129 MA--NMEEEDKLSISVYDYL 138

[Close]

BLAST of ClCG11G008870 vs. TAIR10
Match: AT1G22810.1 (AT1G22810.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-29
Identity = 64/131 (48.85%), Postives = 89/131 (67.94%), Query Frame = 1


Query: 8   KYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLDHLNFP 67
           KYKG+RRRKWGKWVSEIRVPG+++RLWLGS+S+ E AAVAHDVA++CL +P +L+ LNFP
Sbjct: 13  KYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFSTAEGAAVAHDVAFFCLHQPDSLESLNFP 72

Query: 68  PMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSLADPGSRGRAGAGDDNYTPP 127
            ++ P    L+ R   SP SIQ+AAS+A MA+DA  + ++  + G        ++     
Sbjct: 73  HLLNP---SLVSR--TSPRSIQQAASNAGMAIDAGIVHSTSVNSGCGDTTTYYENGADQV 132

Query: 128 NHQDLSIQDYM 139
              ++S+ DY+
Sbjct: 133 EPLNISVYDYL 138

[Close]

BLAST of ClCG11G008870 vs. TAIR10
Match: AT1G44830.1 (AT1G44830.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 94.0 bits (232), Expect = 7.9e-20
Identity = 51/100 (51.00%), Postives = 65/100 (65.00%), Query Frame = 1


Query: 2   ASSETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNL 61
           +S   KKYKGVR R WG WVSEIR P  + R+WLGSYS+ EAAA A+D A  CL + S+ 
Sbjct: 28  SSIRMKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCL-KGSSA 87

Query: 62  DHLNFPPM---VLPLTNHLLIRDDMSPGSIQKAASDAAMA 99
           ++LNFP +   +  + N+    +DMSP SIQ+ A+ AA A
Sbjct: 88  NNLNFPEISTSLYHIINNGDNNNDMSPKSIQRVAAAAAAA 126

[Close]

BLAST of ClCG11G008870 vs. TAIR10
Match: AT3G50260.1 (AT3G50260.1 cooperatively regulated by ethylene and jasmonate 1)

HSP 1 Score: 92.8 bits (229), Expect = 1.8e-19
Identity = 49/95 (51.58%), Postives = 63/95 (66.32%), Query Frame = 1


Query: 7   KKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLDHLNF 66
           + +KG+R RKWGKWV+EIR P  + RLWLGSYS+PEAAA A+D A + LR P+    LNF
Sbjct: 19  RPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTAT--LNF 78

Query: 67  PPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDA 102
           P + LP T+     +DMS  +I+K A++    VDA
Sbjct: 79  PEL-LPCTS----AEDMSAATIRKKATEVGAQVDA 106

[Close]

BLAST of ClCG11G008870 vs. TAIR10
Match: AT5G67190.1 (AT5G67190.1 DREB and EAR motif protein 2)

HSP 1 Score: 92.8 bits (229), Expect = 1.8e-19
Identity = 48/95 (50.53%), Postives = 60/95 (63.16%), Query Frame = 1


Query: 7   KKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLDHLNF 66
           + YKG+R RKWGKWV+EIR P  + RLWLGSYS+PEAAA A+D A + LR P+    LNF
Sbjct: 19  RPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPT--ARLNF 78

Query: 67  PPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDA 102
           P +   L       +DMS  +I+K A++    VDA
Sbjct: 79  PEL---LPGEKFSDEDMSAATIRKKATEVGAQVDA 108

[Close]

BLAST of ClCG11G008870 vs. NCBI nr
Match: gi|659081116|ref|XP_008441160.1| (PREDICTED: ethylene-responsive transcription factor ERF019 [Cucumis melo])

HSP 1 Score: 245.0 bits (624), Expect = 7.8e-62
Identity = 126/148 (85.14%), Postives = 131/148 (88.51%), Query Frame = 1


Query: 1   MASS-----ETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60
           MASS     E KK+KGVR+RKWGKWVSEIRVPGSQ+RLWLGSYSSPEAAAVAHDVAYYCL
Sbjct: 1   MASSSNSLGEIKKFKGVRQRKWGKWVSEIRVPGSQDRLWLGSYSSPEAAAVAHDVAYYCL 60

Query: 61  RRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSLADPGSRG 120
           RRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQ+AASDAAMAVDAQYICNSLAD GS G
Sbjct: 61  RRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQRAASDAAMAVDAQYICNSLADRGSSG 120

Query: 121 RAGA----GDDNYTP-PNHQDLSIQDYM 139
           RAGA    GDD YT   N QDLSIQDY+
Sbjct: 121 RAGAFQASGDDQYTAFNNDQDLSIQDYL 148

[Close]

BLAST of ClCG11G008870 vs. NCBI nr
Match: gi|449442118|ref|XP_004138829.1| (PREDICTED: ethylene-responsive transcription factor ERF020 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 5.1e-61
Identity = 123/148 (83.11%), Postives = 132/148 (89.19%), Query Frame = 1


Query: 1   MASS-----ETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60
           MASS     ETKK+KGVR+RKWGKWVSEIR+PGSQ+RLWLGSYSSPEAAAVAHDVAYYCL
Sbjct: 1   MASSSNSPGETKKFKGVRQRKWGKWVSEIRIPGSQDRLWLGSYSSPEAAAVAHDVAYYCL 60

Query: 61  RRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSLADPGSRG 120
           RRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQ+AASDAAMAVDAQYICNSL D GS G
Sbjct: 61  RRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQRAASDAAMAVDAQYICNSLGDRGSSG 120

Query: 121 RAGA----GDDNYTPPNH-QDLSIQDYM 139
           RAGA    GD+ Y+  N+ QDLSIQDY+
Sbjct: 121 RAGAFQASGDEQYSGLNNDQDLSIQDYL 148

[Close]

BLAST of ClCG11G008870 vs. NCBI nr
Match: gi|566200491|ref|XP_006376167.1| (hypothetical protein POPTR_0013s10420g [Populus trichocarpa])

HSP 1 Score: 157.1 bits (396), Expect = 2.1e-35
Identity = 84/159 (52.83%), Postives = 103/159 (64.78%), Query Frame = 1


Query: 2   ASSETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNL 61
           AS+  KK+KGVRRRKWGKWVSEIR+PG Q+RLWLGSYS+PEAAAVAHD+A YCLR PS++
Sbjct: 15  ASAARKKFKGVRRRKWGKWVSEIRIPGKQDRLWLGSYSTPEAAAVAHDIASYCLRGPSSI 74

Query: 62  DHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICN--------------- 121
           + LNF P++LP +    +R+DMSP SIQKAASDA MA+DAQ I N               
Sbjct: 75  ESLNF-PLMLPAS----VREDMSPKSIQKAASDAGMAIDAQMILNRVPENEVKFWTASGG 134

Query: 122 -------SLADPGSRGRAGAGDDNYTPPNHQDLSIQDYM 139
                   L +P      G    N T     D+SI+DY+
Sbjct: 135 VNHGLEIELCEPAGGDHGGNWHGNNTGMREGDISIEDYL 168

[Close]

BLAST of ClCG11G008870 vs. NCBI nr
Match: gi|802547653|ref|XP_012090680.1| (PREDICTED: ethylene-responsive transcription factor ERF020-like [Jatropha curcas])

HSP 1 Score: 156.4 bits (394), Expect = 3.7e-35
Identity = 80/121 (66.12%), Postives = 95/121 (78.51%), Query Frame = 1


Query: 3   SSETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLD 62
           ++ET KYKGVRRRKWGKWVSEIRVPG+Q RLWLGSYSSPEAAAVAHD+A YCLR  S++D
Sbjct: 9   TAETAKYKGVRRRKWGKWVSEIRVPGTQGRLWLGSYSSPEAAAVAHDIASYCLRGHSSID 68

Query: 63  HLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSL--ADPGSRGRAGAG 122
            LNFP ++LP +    +R D+SP SIQKAASDA MAVDAQ I N +  +D    G  G+G
Sbjct: 69  SLNFPDLMLPAS----VRGDISPTSIQKAASDAGMAVDAQMIMNRVGSSDNEVNGNEGSG 125

[Close]

BLAST of ClCG11G008870 vs. NCBI nr
Match: gi|802541545|ref|XP_012080229.1| (PREDICTED: ethylene-responsive transcription factor ERF020 [Jatropha curcas])

HSP 1 Score: 156.0 bits (393), Expect = 4.8e-35
Identity = 77/104 (74.04%), Postives = 87/104 (83.65%), Query Frame = 1


Query: 3   SSETKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLD 62
           ++ET KYKGVRRRKWGKWVSEIRVPG+Q RLWLGSYSSPEAAAVAHD+A YCLR  S++D
Sbjct: 85  TAETAKYKGVRRRKWGKWVSEIRVPGTQRRLWLGSYSSPEAAAVAHDIASYCLRGHSSID 144

Query: 63  HLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICN 107
            LNFP ++LP +    +R DMSP SIQKAASDA MAVDAQ I N
Sbjct: 145 SLNFPDLMLPAS----VRGDMSPTSIQKAASDAGMAVDAQMIMN 184

The following BLAST results are available for this feature:

BLAST of ClCG11G008870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF20_ARATH	1.8e-29	51.43	Ethylene-responsive transcription factor ERF020 OS=Arabidopsis thaliana GN=ERF02...	[more]
ERF19_ARATH	2.5e-28	48.85	Ethylene-responsive transcription factor ERF019 OS=Arabidopsis thaliana GN=ERF01...	[more]
ERF14_ARATH	1.4e-18	51.00	Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana GN=ERF01...	[more]
ERF10_ARATH	3.1e-18	50.53	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF01...	[more]
ERF11_ARATH	3.1e-18	51.58	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF01...	[more]

BLAST of ClCG11G008870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPY2_CUCSA	3.5e-61	83.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401240 PE=4 SV=1	[more]
A9PL99_POPTR	1.5e-35	52.83	RAP2-like protein OS=Populus trichocarpa GN=RAP2L9 PE=4 SV=1	[more]
A0A067LJD7_JATCU	2.6e-35	66.12	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01235 PE=4 SV=1	[more]
M5XPN8_PRUPE	6.3e-34	71.30	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020605mg PE=4 SV=1	[more]
A9PLA0_POPTR	6.3e-34	70.48	RAP2-like protein OS=Populus trichocarpa GN=RAP2L10 PE=4 SV=1	[more]

BLAST of ClCG11G008870 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71520.1	9.9e-31	51.43	Integrase-type DNA-binding superfamily protein	[more]
AT1G22810.1	1.4e-29	48.85	Integrase-type DNA-binding superfamily protein	[more]
AT1G44830.1	7.9e-20	51.00	Integrase-type DNA-binding superfamily protein	[more]
AT3G50260.1	1.8e-19	51.58	cooperatively regulated by ethylene and jasmonate 1	[more]
AT5G67190.1	1.8e-19	50.53	DREB and EAR motif protein 2	[more]

BLAST of ClCG11G008870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081116\|ref\|XP_008441160.1\|	7.8e-62	85.14	PREDICTED: ethylene-responsive transcription factor ERF019 [Cucumis melo]	[more]
gi\|449442118\|ref\|XP_004138829.1\|	5.1e-61	83.11	PREDICTED: ethylene-responsive transcription factor ERF020 [Cucumis sativus]	[more]
gi\|566200491\|ref\|XP_006376167.1\|	2.1e-35	52.83	hypothetical protein POPTR_0013s10420g [Populus trichocarpa]	[more]
gi\|802547653\|ref\|XP_012090680.1\|	3.7e-35	66.12	PREDICTED: ethylene-responsive transcription factor ERF020-like [Jatropha curcas...	[more]
gi\|802541545\|ref\|XP_012080229.1\|	4.8e-35	74.04	PREDICTED: ethylene-responsive transcription factor ERF020 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G008870.1	ClCG11G008870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 9..20 score: 4.7E-8coord: 31..47 score: 4.
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 8..67 score: 8.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 8..56 score: 5.
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 8..73 score: 3.8
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 8..67 score: 21
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 8..67 score: 2.09
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 2..104 score: 2.0
None	No IPR available	PANTHER	PTHR31985:SF3	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF019-RELATED	coord: 2..104 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG11G008870	Csa2G401240	Cucumber (Chinese Long) v2	cuwcgB097
ClCG11G008870	MELO3C008082	Melon (DHL92) v3.5.1	mewcgB269
ClCG11G008870	Cla011988	Watermelon (97103) v1	wcgwmB104
ClCG11G008870	Cla97C11G214880	Watermelon (97103) v2	wcgwmbB067
ClCG11G008870	Bhi04G002104	Wax gourd	wcgwgoB159
ClCG11G008870	CSPI02G24590	Wild cucumber (PI 183967)	cpiwcgB103
ClCG11G008870	Cucsa.088640	Cucumber (Gy14) v1	cgywcgB099
ClCG11G008870	CmaCh15G000110	Cucurbita maxima (Rimu)	cmawcgB250
ClCG11G008870	CmaCh04G030280	Cucurbita maxima (Rimu)	cmawcgB631
ClCG11G008870	CmoCh04G031510	Cucurbita moschata (Rifu)	cmowcgB633
ClCG11G008870	CmoCh15G000110	Cucurbita moschata (Rifu)	cmowcgB238
ClCG11G008870	Lsi11G010150	Bottle gourd (USVL1VR-Ls)	lsiwcgB079
ClCG11G008870	Cp4.1LG13g11780	Cucurbita pepo (Zucchini)	cpewcgB162
ClCG11G008870	Cp4.1LG01g26310	Cucurbita pepo (Zucchini)	cpewcgB367
ClCG11G008870	CsGy2G024360	Cucumber (Gy14) v2	cgybwcgB095
ClCG11G008870	MELO3C008082.2	Melon (DHL92) v3.6.1	medwcgB260
ClCG11G008870	Carg24978	Silver-seed gourd	carwcgB0705
ClCG11G008870	Carg06101	Silver-seed gourd	carwcgB0023
ClCG11G008870	CsaV3_2G033120	Cucumber (Chinese Long) v3	cucwcgB113

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG11G008870	Bottle gourd (USVL1VR-Ls)	lsiwcgB088