CmaCh04G026310 (gene) Cucurbita maxima (Rimu)

NameCmaCh04G026310
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A
LocationCma_Chr04 : 17961556 .. 17963332 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATAATAATTGAATATAAGAATCATTGGACCAAACAGCAACGACTTGGAGAACAAGAGAGTGAAGAAAAAACTTCAAAAACACGAAAAGTGGAAAACTTTTCTGCAACGGAAGTGAGCACTTACCTACCTAACAATTTCAGATCTAAATCTAGAATCTCAATGAACCTCAAGAAATAAACAAATAAACAAATTTGATGAACGATTTAAGCCTGCGATCAACTAAAGAAAGTGAATGATGTAGAGATTCTATACCTTAGAGTAGCCGAATCAAAATCTGGGGACCTCGATTCTTTCGTTTTCGCCGTGGAATTTAAGGTTTCTGGCACAAATTAATGCAGAAACCGAGGAGGGTGTGGGATTTTTCGACGGTAATCGAAATGGCGGGTCCCAAAATCGGAACAGAGTTGAAAATGAAGAACGTTACGTTTCACGGAGATTAGTTGTCTTTTTGGATTAATGTTACCGTAGATTACACCTCATTTCGTTTATCCAATCTTAATCAAAATCATCCTTCTTAATTTCCCTTTTCATTTACGTTATCGTTTTGACTTTCTCATTCAGCCCATAAATTTTTTAAAAAATTATTTCCACTCTGATGTTTCTAAAAAATTTATATAAATATCACCTCCTCTTAATTTTAGAGTTTTTATTAATAAAAACATCAAAATTAAGCGTAAAAATAATTTTAAATTTGATGTCTTTTTATAAATTTAATTATAGAGTATATAAGTGAAAATACTCGAAAAATTAGTGTTAATTTCTGAAGACAATTCTGTCCTGGTAAAGTTATATATTTTTTTTTTTAATTTTTTTAATTTTTTTTTTCTTGTAAATCACTTACTGATGGTGGAATTAATAAATTCTTTAATCTATTTTTAGGAAATTATTGACAAAAATGTTGAAATTGGAAAGTGTGAAACACGTTTACATGGGTTTTACTTAATTGGAGTTTTTTTTTATTTATTATTTTATATGTCATATTAAATATGAAGTAATTTTGGTAGTTATGGGCCAACTGAAAATTGGGTCGGCCATAGGCTAAACTCGAAAATAATGGGCCGGGGCCCAATATTCGTTTGAGAAAGCCACTGAAAATAAAAGAATGAATCGGAAGTCTCTTCCCTAGACTCTGCATCTCGAAGAATTTTGTCGTCGGATCTTCTTGTTGGCCGCGTGTTTTTCTCTCAATCGATCAGATCGGAAGGTACATTAATCTTTCTCTTTTCCTCTCGGAATTTGATTGGATATATCAACAAATATAAGTTCAAGATTAGGATTTCGATTTCTTAGCAAAAAATGGAATCTCATTCTCTGGACCTGGAAATTCGTCTTCCGAACTGTTTGTGAATTACTACGTTTCAATGTCTAGTTTTGAAGAATCTGAATGATTGTTTGTTGTCGAAGGATTTGATTTCCGTCCTATTGTTGCGTTGCGCAGATGATTGACGATCAGGCGTTAGGGTTTCTTGCCAATTTTCTCGGCATTTTTGTCTTTGCTTTGGTGATTGCTTACCATTACGTGGCGGCTGATCCGAAGTATGAAGGCAACTGAGATGAGAGACCTCGATGTTCAGATGCTTAGATTGATCGGAAAAATGCATTACTGTTAGACGTAGGTCATTTTGATATGACAGGTTTTTCTTCTTCTATGAGAATTTTCTCCTTGCAACAATCAATGTTAACAGCAATTTCATTATGCAATTATAACTTATTCTCGTAATTTTTCGTGGTTATTTGATCGATTGCTTCAGTTGCTCTTTAGTAGATCGGA

mRNA sequence

ATGAACATAATAATTGAATATAAGAATCATTGGACCAAACAGCAACGACTTGGAGAACAAGAGAGTGAAGAAAAAACTTCAAAAACACGAAAAGTGGAAAACTTTTCTGCAACGGAACCGAATCAAAATCTGGGGACCTCGATTCTTTCGTTTTCGCCGTGGAATTTAAGGTTTCTGGCACAAATTAATGCAGAAACCGAGGAGGGTGTGGGATTTTTCGACGGTAATCGAAATGGCGGGTCCCAAAATCGGAACAGAGTTGAAAATGAAGAACGTTACACTCTGCATCTCGAAGAATTTTGTCGTCGGATCTTCTTGTTGGCCGCGTGTTTTTCTCTCAATCGATCAGATCGGAAGATGATTGACGATCAGGCGTTAGGGTTTCTTGCCAATTTTCTCGGCATTTTTGTCTTTGCTTTGGTGATTGCTTACCATTACGTGGCGGCTGATCCGAAGTATGAAGGCAACTGAGATGAGAGACCTCGATGTTCAGATGCTTAGATTGATCGGAAAAATGCATTACTGTTAGACGTAGGTCATTTTGATATGACAGGTTTTTCTTCTTCTATGAGAATTTTCTCCTTGCAACAATCAATGTTAACAGCAATTTCATTATGCAATTATAACTTATTCTCGTAATTTTTCGTGGTTATTTGATCGATTGCTTCAGTTGCTCTTTAGTAGATCGGA

Coding sequence (CDS)

ATGAACATAATAATTGAATATAAGAATCATTGGACCAAACAGCAACGACTTGGAGAACAAGAGAGTGAAGAAAAAACTTCAAAAACACGAAAAGTGGAAAACTTTTCTGCAACGGAACCGAATCAAAATCTGGGGACCTCGATTCTTTCGTTTTCGCCGTGGAATTTAAGGTTTCTGGCACAAATTAATGCAGAAACCGAGGAGGGTGTGGGATTTTTCGACGGTAATCGAAATGGCGGGTCCCAAAATCGGAACAGAGTTGAAAATGAAGAACGTTACACTCTGCATCTCGAAGAATTTTGTCGTCGGATCTTCTTGTTGGCCGCGTGTTTTTCTCTCAATCGATCAGATCGGAAGATGATTGACGATCAGGCGTTAGGGTTTCTTGCCAATTTTCTCGGCATTTTTGTCTTTGCTTTGGTGATTGCTTACCATTACGTGGCGGCTGATCCGAAGTATGAAGGCAACTGA

Protein sequence

MNIIIEYKNHWTKQQRLGEQESEEKTSKTRKVENFSATEPNQNLGTSILSFSPWNLRFLAQINAETEEGVGFFDGNRNGGSQNRNRVENEERYTLHLEEFCRRIFLLAACFSLNRSDRKMIDDQALGFLANFLGIFVFALVIAYHYVAADPKYEGN
BLAST of CmaCh04G026310 vs. Swiss-Prot
Match: OST4A_ARATH (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Arabidopsis thaliana GN=OST4A PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.1e-11
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 1

Query: 120 MIDDQALGFLANFLGIFVFALVIAYHYVAADPKYE 155
           MIDDQ LGF+ANFLGIF+FALVIAYHYV ADPKYE
Sbjct: 1   MIDDQDLGFIANFLGIFIFALVIAYHYVTADPKYE 35

BLAST of CmaCh04G026310 vs. Swiss-Prot
Match: OST4A_ORYSJ (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Oryza sativa subsp. japonica GN=OST4A PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 1

Query: 120 MIDDQALGFLANFLGIFVFALVIAYHYVAADPKYEGN 157
           M DDQ LGF ANFLGIF+F LVIAYH+V ADPKYEGN
Sbjct: 1   MFDDQDLGFFANFLGIFIFVLVIAYHFVMADPKYEGN 37

BLAST of CmaCh04G026310 vs. Swiss-Prot
Match: OST4B_ORYSJ (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4B OS=Oryza sativa subsp. japonica GN=OST4B PE=3 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-09
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 1

Query: 120 MIDDQALGFLANFLGIFVFALVIAYHYVAADPKYEGN 157
           M DDQ LGF ANFLGIF+F LV+AYH+V AD KYEGN
Sbjct: 1   MFDDQDLGFFANFLGIFIFVLVMAYHFVMADVKYEGN 37

BLAST of CmaCh04G026310 vs. Swiss-Prot
Match: OST4C_ARATH (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4C OS=Arabidopsis thaliana GN=OST4C PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 1

Query: 120 MIDDQALGFLANFLGIFVFALVIAYHYVAADPKYE 155
           M DDQ LGF ANFLGIF+F LVIAYH+V ADPK+E
Sbjct: 1   MFDDQDLGFFANFLGIFIFILVIAYHFVMADPKFE 35

BLAST of CmaCh04G026310 vs. Swiss-Prot
Match: OST4B_ARATH (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4B OS=Arabidopsis thaliana GN=OST4B PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.6e-08
Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 1

Query: 120 MIDDQALGFLANFLGIFVFALVIAYHYVAADPKYE 155
           M DDQ LGF ANFLGIF+F +VIAYH+V A+PK+E
Sbjct: 1   MFDDQDLGFFANFLGIFIFIMVIAYHFVVAEPKFE 35

BLAST of CmaCh04G026310 vs. TrEMBL
Match: A0A0D2TDN8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G256200 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.7e-11
Identity = 42/65 (64.62%), Postives = 45/65 (69.23%), Query Frame = 1

Query: 96  HLEEFCRRIFLLAA--CFSLNRSDR--KMIDDQALGFLANFLGIFVFALVIAYHYVAADP 155
           HL +  R    L +  CF    S R  KMIDDQ LGFLANFLGIF+F LVIAYHYV ADP
Sbjct: 6   HLPKVFRHFSSLRSTHCFDALASHRSTKMIDDQQLGFLANFLGIFIFGLVIAYHYVMADP 65

Query: 156 KYEGN 157
           KYEGN
Sbjct: 66  KYEGN 70

BLAST of CmaCh04G026310 vs. TrEMBL
Match: A0A059A7I3_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_K03148 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-10
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 1

Query: 119 KMIDDQALGFLANFLGIFVFALVIAYHYVAADPKYEGN 157
           KMIDD+ LGFLANFLGIF+FALVIAYHYV ADPKYEGN
Sbjct: 32  KMIDDRDLGFLANFLGIFIFALVIAYHYVTADPKYEGN 69

BLAST of CmaCh04G026310 vs. TrEMBL
Match: V4NQB2_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021851mg PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-10
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 1

Query: 100 FCRRIFLLAACFSLNRS--DRKMIDDQALGFLANFLGIFVFALVIAYHYVAADPKYE 155
           FC+ +         +RS  D+ MIDDQ LGF+ NFLGIF+FALVIAYHYVAADPKYE
Sbjct: 30  FCKSLLFPGDLIRSHRSRPDKTMIDDQDLGFIVNFLGIFIFALVIAYHYVAADPKYE 86

BLAST of CmaCh04G026310 vs. TrEMBL
Match: Q9C7B2_ARATH (Putative uncharacterized protein T2E22.10 OS=Arabidopsis thaliana GN=T2E22.10 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.2e-10
Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = 1

Query: 115  RSDRKMIDDQALGFLANFLGIFVFALVIAYHYVAADPKYE 155
            R D+ MIDDQ LGF+ANFLGIF+FALVIAYHYV ADPKYE
Sbjct: 1170 RPDKTMIDDQDLGFIANFLGIFIFALVIAYHYVTADPKYE 1209

BLAST of CmaCh04G026310 vs. TrEMBL
Match: A0A0B0NL75_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_00650 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.2e-10
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 1

Query: 120 MIDDQALGFLANFLGIFVFALVIAYHYVAADPKYEGN 157
           MIDD+ LGFLANFLGIF+FALVIAYHYV ADPKYEGN
Sbjct: 1   MIDDEQLGFLANFLGIFIFALVIAYHYVMADPKYEGN 37

BLAST of CmaCh04G026310 vs. TAIR10
Match: AT3G12587.1 (AT3G12587.1 Oligosaccaryltransferase)

HSP 1 Score: 68.6 bits (166), Expect = 4.0e-12
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 1

Query: 120 MIDDQALGFLANFLGIFVFALVIAYHYVAADPKYE 155
           MIDDQ LGF+ANFLGIF+FALVIAYHYV ADPKYE
Sbjct: 1   MIDDQDLGFIANFLGIFIFALVIAYHYVTADPKYE 35

BLAST of CmaCh04G026310 vs. TAIR10
Match: AT5G02502.1 (AT5G02502.1 Oligosaccaryltransferase)

HSP 1 Score: 58.9 bits (141), Expect = 3.2e-09
Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 1

Query: 120 MIDDQALGFLANFLGIFVFALVIAYHYVAADPKYE 155
           M DDQ LGF ANFLGIF+F +VIAYH+V A+PK+E
Sbjct: 1   MFDDQDLGFFANFLGIFIFIMVIAYHFVVAEPKFE 35

BLAST of CmaCh04G026310 vs. NCBI nr
Match: gi|763806915|gb|KJB73853.1| (hypothetical protein B456_011G256200 [Gossypium raimondii])

HSP 1 Score: 77.4 bits (189), Expect = 2.4e-11
Identity = 42/65 (64.62%), Postives = 45/65 (69.23%), Query Frame = 1

Query: 96  HLEEFCRRIFLLAA--CFSLNRSDR--KMIDDQALGFLANFLGIFVFALVIAYHYVAADP 155
           HL +  R    L +  CF    S R  KMIDDQ LGFLANFLGIF+F LVIAYHYV ADP
Sbjct: 6   HLPKVFRHFSSLRSTHCFDALASHRSTKMIDDQQLGFLANFLGIFIFGLVIAYHYVMADP 65

Query: 156 KYEGN 157
           KYEGN
Sbjct: 66  KYEGN 70

BLAST of CmaCh04G026310 vs. NCBI nr
Match: gi|449449984|ref|XP_004142744.1| (PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-10
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 1

Query: 120 MIDDQALGFLANFLGIFVFALVIAYHYVAADPKYEGN 157
           MIDDQ LGFLANFLGIFVFALVIAYHYV ADPKYEGN
Sbjct: 1   MIDDQELGFLANFLGIFVFALVIAYHYVTADPKYEGN 37

BLAST of CmaCh04G026310 vs. NCBI nr
Match: gi|629083181|gb|KCW49626.1| (hypothetical protein EUGRSUZ_K03148, partial [Eucalyptus grandis])

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-10
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 1

Query: 119 KMIDDQALGFLANFLGIFVFALVIAYHYVAADPKYEGN 157
           KMIDD+ LGFLANFLGIF+FALVIAYHYV ADPKYEGN
Sbjct: 32  KMIDDRDLGFLANFLGIFIFALVIAYHYVTADPKYEGN 69

BLAST of CmaCh04G026310 vs. NCBI nr
Match: gi|659126994|ref|XP_008463467.1| (PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Cucumis melo])

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-10
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 1

Query: 120 MIDDQALGFLANFLGIFVFALVIAYHYVAADPKYEGN 157
           MIDDQ LGFLANFLGIF+FALVIAYHYV ADPKYEGN
Sbjct: 1   MIDDQELGFLANFLGIFIFALVIAYHYVTADPKYEGN 37

BLAST of CmaCh04G026310 vs. NCBI nr
Match: gi|567200066|ref|XP_006407318.1| (hypothetical protein EUTSA_v10021851mg [Eutrema salsugineum])

HSP 1 Score: 73.9 bits (180), Expect = 2.7e-10
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 1

Query: 100 FCRRIFLLAACFSLNRS--DRKMIDDQALGFLANFLGIFVFALVIAYHYVAADPKYE 155
           FC+ +         +RS  D+ MIDDQ LGF+ NFLGIF+FALVIAYHYVAADPKYE
Sbjct: 30  FCKSLLFPGDLIRSHRSRPDKTMIDDQDLGFIVNFLGIFIFALVIAYHYVAADPKYE 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
OST4A_ARATH7.1e-1188.57Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Ara... [more]
OST4A_ORYSJ1.2e-1081.08Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Ory... [more]
OST4B_ORYSJ3.0e-0975.68Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4B OS=Ory... [more]
OST4C_ARATH1.5e-0877.14Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4C OS=Ara... [more]
OST4B_ARATH5.6e-0871.43Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4B OS=Ara... [more]
Match NameE-valueIdentityDescription
A0A0D2TDN8_GOSRA1.7e-1164.62Uncharacterized protein OS=Gossypium raimondii GN=B456_011G256200 PE=4 SV=1[more]
A0A059A7I3_EUCGR1.1e-1089.47Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_K03148 PE=4 ... [more]
V4NQB2_EUTSA1.9e-1063.16Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021851mg PE=4 SV=1[more]
Q9C7B2_ARATH3.2e-1082.50Putative uncharacterized protein T2E22.10 OS=Arabidopsis thaliana GN=T2E22.10 PE... [more]
A0A0B0NL75_GOSAR3.2e-1089.19Uncharacterized protein OS=Gossypium arboreum GN=F383_00650 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G12587.14.0e-1288.57 Oligosaccaryltransferase[more]
AT5G02502.13.2e-0971.43 Oligosaccaryltransferase[more]
Match NameE-valueIdentityDescription
gi|763806915|gb|KJB73853.1|2.4e-1164.62hypothetical protein B456_011G256200 [Gossypium raimondii][more]
gi|449449984|ref|XP_004142744.1|1.2e-1094.59PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subuni... [more]
gi|629083181|gb|KCW49626.1|1.6e-1089.47hypothetical protein EUGRSUZ_K03148, partial [Eucalyptus grandis][more]
gi|659126994|ref|XP_008463467.1|1.6e-1091.89PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subuni... [more]
gi|567200066|ref|XP_006407318.1|2.7e-1063.16hypothetical protein EUTSA_v10021851mg [Eutrema salsugineum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018943Oligosaccaryltransferase
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G026310.1CmaCh04G026310.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018943OligosaccaryltransferasePFAMPF10215Ost4coord: 120..152
score: 5.7
IPR018943OligosaccaryltransferaseunknownSSF103464Oligosaccharyltransferase subunit ost4pcoord: 120..150
score: 3.5
NoneNo IPR availablePANTHERPTHR28677FAMILY NOT NAMEDcoord: 1..156
score: 2.6
NoneNo IPR availablePANTHERPTHR28677:SF1DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 4Acoord: 1..156
score: 2.6

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G026310Cucsa.010590Cucumber (Gy14) v1cgycmaB0543
CmaCh04G026310CmoCh15G004150Cucurbita moschata (Rifu)cmacmoB692
CmaCh04G026310Cp4.1LG01g23990Cucurbita pepo (Zucchini)cmacpeB721
CmaCh04G026310Carg04510Silver-seed gourdcarcmaB0967
The following gene(s) are paralogous to this gene:

None